NO06G04740, NO06G04740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04740 vs. NCBI_GenBank
Match: AAV44035.1 (putative helicase [Oryza sativa Japonica Group]) HSP 1 Score: 79.0 bits (193), Expect = 9.700e-12 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0 Query: 20 SQDENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVGQ 95 + E + YPT LNS N P H L+LKVG+P++LLRN + GL NGTR+ I L R IEA+I+TG HVG+ Sbjct: 1463 NDSETDVLYPTEFLNSLNFPGMPNHVLKLKVGLPVMLLRNINQSSGLCNGTRMTITQLGKRFIEAQIITGTHVGE 1537
BLAST of NO06G04740 vs. NCBI_GenBank
Match: AAK54302.1 (putative helicase [Oryza sativa Japonica Group] >AAP54108.1 AT hook motif-containing protein, putative [Oryza sativa Japonica Group]) HSP 1 Score: 79.0 bits (193), Expect = 9.700e-12 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 0 Query: 23 ENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVGQL 96 E E YPT LNS P HQL+LKVG+P++LLRN + GL NGTR+ I RVIEA+I+TG H+G + Sbjct: 1404 EMEMLYPTEFLNSLKHPGIPNHQLKLKVGLPVMLLRNINQNAGLCNGTRMRITRFGKRVIEAEIITGTHIGDM 1476
BLAST of NO06G04740 vs. NCBI_GenBank
Match: EEE51084.1 (hypothetical protein OsJ_31783 [Oryza sativa Japonica Group]) HSP 1 Score: 79.0 bits (193), Expect = 9.700e-12 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 0 Query: 23 ENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVGQL 96 E E YPT LNS P HQL+LKVG+P++LLRN + GL NGTR+ I RVIEA+I+TG H+G + Sbjct: 122 EMEMLYPTEFLNSLKHPGIPNHQLKLKVGLPVMLLRNINQNAGLCNGTRMRITRFGKRVIEAEIITGTHIGDM 194
BLAST of NO06G04740 vs. NCBI_GenBank
Match: XP_020255298.1 (uncharacterized protein LOC109832283 [Asparagus officinalis]) HSP 1 Score: 79.0 bits (193), Expect = 9.700e-12 Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 0 Query: 7 LNSDPIPPSADRLSQDENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVGQLQAATR 101 L+SD I ++ L N+ YPT LNS PS H+++LKVG PI+LL N P +GL NGTRL++ L VIEA+I++G H+G +R Sbjct: 916 LSSDSICQTSPNLQL--NQSLYPTEFLNSLTFPSMPNHEIKLKVGTPIMLLHNLRPTEGLCNGTRLVVTQLLKWVIEARIISGSHIGSKHFLSR 1007
BLAST of NO06G04740 vs. NCBI_GenBank
Match: XP_021854440.1 (uncharacterized protein LOC110793821 [Spinacia oleracea]) HSP 1 Score: 79.0 bits (193), Expect = 9.700e-12 Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 0 Query: 15 SADRL-----SQDENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVGQLQAATR 101 SADR+ + +E YPT LN+ P H++RLKVG PIIL RN +GL NGTRL++ L RVI+AK++TG +VG+ A R Sbjct: 79 SADRICPFTNTSTNDEVLYPTEFLNTLQFPGIPNHEIRLKVGCPIILTRNISQSEGLCNGTRLIVSRLDTRVIQAKVVTGTNVGEQVAIPR 169
BLAST of NO06G04740 vs. NCBI_GenBank
Match: XP_021840493.1 (uncharacterized protein LOC110780404 [Spinacia oleracea]) HSP 1 Score: 79.0 bits (193), Expect = 9.700e-12 Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 0 Query: 10 DPIPPSADRLSQDENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVGQ 95 D + P A+R S DE+ YPT LN+ H++RLKVG PIILLRN + V+GL NGTRL+I L VIEA+++TG +VG+ Sbjct: 333 DRVSPLANRTSVDED--LYPTEFLNTLQFLGIPNHEIRLKVGCPIILLRNINQVEGLCNGTRLIITRLEQIVIEAQVVTGTNVGR 415
BLAST of NO06G04740 vs. NCBI_GenBank
Match: XP_021722586.1 (uncharacterized protein LOC110690069 [Chenopodium quinoa]) HSP 1 Score: 78.6 bits (192), Expect = 1.300e-11 Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 0 Query: 22 DENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVG 94 D+ AYPT LNS P H+L+LK G+P++LLRN +P QGL NGTRL+I HL VIE KI+TG G Sbjct: 204 DQQFDAYPTEYLNSLKLPGLPHHELKLKEGMPVMLLRNINPPQGLCNGTRLIITHLGKFVIEGKIITGSKQG 275
BLAST of NO06G04740 vs. NCBI_GenBank
Match: BAD68127.1 (helicase-like protein [Oryza sativa Japonica Group]) HSP 1 Score: 78.6 bits (192), Expect = 1.300e-11 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0 Query: 15 SADRLSQ-----DENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVGQ 95 SAD LSQ ++ + YP LNS N +F H L+LKVG+PIILLRN + GL NGTRL+I +L +IE I+TG H+G+ Sbjct: 1241 SADTLSQCMDTTNDADILYPVEYLNSLNANNFPTHVLKLKVGVPIILLRNLNQNLGLCNGTRLIITNLGDNIIEGIIITGTHIGE 1325
BLAST of NO06G04740 vs. NCBI_GenBank
Match: XP_020243206.1 (uncharacterized protein LOC109821431 [Asparagus officinalis]) HSP 1 Score: 78.2 bits (191), Expect = 1.700e-11 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0 Query: 8 NSDPIPPSADRLSQDENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVG 94 +SD I P++ L+ NE YPT LNS+ P H+++LKVG PI+LLRN P G+ NGTRL+I L +IEA+I++G ++G Sbjct: 202 SSDSICPTSPNLA--SNEILYPTKFLNSQKFPGMPNHEIKLKVGTPIMLLRNLSPADGICNGTRLVITQLLKWIIEARIISGSNIG 285
BLAST of NO06G04740 vs. NCBI_GenBank
Match: XP_023899951.1 (ATP-dependent DNA helicase PIF1-like [Quercus suber]) HSP 1 Score: 78.2 bits (191), Expect = 1.700e-11 Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 0 Query: 7 LNSDPI-PPSADRLSQDENEGAYPTALLNSKNPPSFALHQLRLKVGIPIILLRNADPVQGLANGTRLLILHLSPRVIEAKILTGIHVG 94 L++D I S + L QD YPT LLNS P H+LRLKVG+PI+LLRN + GL NGTRLL+ LS V+EA+I++G HVG Sbjct: 13 LSADSICKASTNILDQDV---MYPTELLNSLKYPDIPNHKLRLKVGLPIMLLRNLNQSAGLCNGTRLLVTQLSKWVLEAQIISGSHVG 97 The following BLAST results are available for this feature:
BLAST of NO06G04740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04740 ID=NO06G04740|Name=NO06G04740|organism=Nannochloropsis oceanica|type=gene|length=306bpback to top protein sequence of NO06G04740.1 >NO06G04740.1-protein ID=NO06G04740.1-protein|Name=NO06G04740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=102bpback to top Synonyms
Publications
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