NO06G04710, NO06G04710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04710 vs. NCBI_GenBank
Match: CEO95568.1 (hypothetical protein PBRA_004294 [Plasmodiophora brassicae]) HSP 1 Score: 67.4 bits (163), Expect = 7.600e-8 Identity = 54/195 (27.69%), Postives = 95/195 (48.72%), Query Frame = 0 Query: 1 MLINSCVPVEKYVNLTST--IKLGPPPDKYQGFGQVQINRVLKLGTAASQPSLFVVDSRETMTGEVHTYKFTVRSNYVPPTGSDTMNNAFEATLAWIEPEVSPGASRIVLHDLDLVASLDSQGLPIKKKYPNNLQKP-------------DNLNVLEKIRLPTPTPGDVITVNVTGTSITMTDKQAYSLVASGPF 181 M INS V + +V + + + PPP QG+G++Q++R+L L AA Q L + D+R +TG+ H + F VR + P F+A+L W +P A +++++LDL+ + +P + N + D +N +E++ + P + V V+GT + + Q Y+LV +G F Sbjct: 624 MAINSGVTMTGWVVSLNAGPVNVDPPPSMLQGYGRMQLDRILPLAPAAFQ--LVISDNRSMVTGDHHHFCFRVRPSDRP----------FKASLVWTDPPPDLDADYLLINNLDLIVT----SIPTGALWIGNFRDSIIADNSTRLHTFMDAMNNVEQVDV-GPDQDGLFDVMVSGTHV-VVGPQPYALVVTGTF 800
BLAST of NO06G04710 vs. NCBI_GenBank
Match: CEO97668.1 (hypothetical protein PBRA_005782 [Plasmodiophora brassicae]) HSP 1 Score: 66.6 bits (161), Expect = 1.300e-7 Identity = 54/176 (30.68%), Postives = 78/176 (44.32%), Query Frame = 0 Query: 22 GPPPDKYQGFGQVQINRVLKLGTAASQPSLFVV-------DSRETMTGEVHTYKFTVRSNYV--PPTGSDTMNNAFEATLAWIEPEVSPGASRIVLHDLDLVASLDSQGLPIKKKYPNNLQKPDNLNVLEKIRLPTPT-PGDVITVNVTGTSITM------TDKQAYSLVASGPFV 182 G PPD QGFG+V++NRVL S + + D + + HTY F V Y PP TL W + G S ++ DLDL +L + P Y N D +N +E++ L + PG ITV V+G ++ + + Q Y+LVA+G V Sbjct: 624 GTPPDNQQGFGRVRLNRVLYFADEDSTAHVTFMPRGPNRADPVLSQSNHTHTYTFCVSYLYTLWPP----------RFTLVWTDAPQIAGTSPTIIQDLDLTVTLSTS--PAATIYANGGTGYDRVNTVERVVLDSNVQPGVEITVTVSGANLPVQMPGYPSSTQPYALVATGRIV 787
BLAST of NO06G04710 vs. NCBI_GenBank
Match: PSC76614.1 (Serine protease ABC transporter B family tagA isoform B [Micractinium conductrix]) HSP 1 Score: 64.3 bits (155), Expect = 6.400e-7 Identity = 51/166 (30.72%), Postives = 79/166 (47.59%), Query Frame = 0 Query: 19 IKLGPPPDKYQGFGQVQINRVLKLGTAASQPSLFVVDSRETMTGEVHTYKFTVRSNYVPPTGSDTMNNAFEATLAWIEPEVSPGASRIVLHDLDL-VASLDSQGLPI--KKKYPNNLQKPDNLNVLEKIRLPTPTPGDVITVNVTGTSI-TMTDKQAYSLVASGPF 181 + + PPP QG+G+V + + L A+ P L V+D+ GE H Y +R+N P TL W + +++++DLDL V + G+P+ +N PD+ N +E++ L T PG V V V G+SI T Y+LV +G F Sbjct: 818 LPIDPPPSFRQGYGRVWLGNSVYLAGNANSPQLQVLDAVPINQGESHEY--CIRANGGP----------LSITLVWADFPGDVAGGKVLVNDLDLSVRAAGLNGVPLLGNGGSVSNAANPDSENNVEQVALTTLPPGPV-AVTVRGSSIFTAAGAPQYALVVNGDF 970
BLAST of NO06G04710 vs. NCBI_GenBank
Match: PSC76615.1 (Serine protease ABC transporter B family tagA isoform A [Micractinium conductrix]) HSP 1 Score: 64.3 bits (155), Expect = 6.400e-7 Identity = 51/166 (30.72%), Postives = 79/166 (47.59%), Query Frame = 0 Query: 19 IKLGPPPDKYQGFGQVQINRVLKLGTAASQPSLFVVDSRETMTGEVHTYKFTVRSNYVPPTGSDTMNNAFEATLAWIEPEVSPGASRIVLHDLDL-VASLDSQGLPI--KKKYPNNLQKPDNLNVLEKIRLPTPTPGDVITVNVTGTSI-TMTDKQAYSLVASGPF 181 + + PPP QG+G+V + + L A+ P L V+D+ GE H Y +R+N P TL W + +++++DLDL V + G+P+ +N PD+ N +E++ L T PG V V V G+SI T Y+LV +G F Sbjct: 818 LPIDPPPSFRQGYGRVWLGNSVYLAGNANSPQLQVLDAVPINQGESHEY--CIRANGGP----------LSITLVWADFPGDVAGGKVLVNDLDLSVRAAGLNGVPLLGNGGSVSNAANPDSENNVEQVALTTLPPGPV-AVTVRGSSIFTAAGAPQYALVVNGDF 970 The following BLAST results are available for this feature:
BLAST of NO06G04710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04710 ID=NO06G04710|Name=NO06G04710|organism=Nannochloropsis oceanica|type=gene|length=789bpback to top protein sequence of NO06G04710.1 >NO06G04710.1-protein ID=NO06G04710.1-protein|Name=NO06G04710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=263bpback to top Synonyms
Publications
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