NO06G04580, NO06G04580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_005761927.1 (hypothetical protein EMIHUDRAFT_432883 [Emiliania huxleyi CCMP1516] >EOD09498.1 hypothetical protein EMIHUDRAFT_432883 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 172.2 bits (435), Expect = 3.200e-39 Identity = 87/216 (40.28%), Postives = 119/216 (55.09%), Query Frame = 0 Query: 137 RHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFEN--IEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKI 350 RH L + + V + YD GD F+D+ + W + + L A I L + N ++KPGPVFN + A GA+YLYRVNDD+EF+ PW +R+L+ P GVVGP C + N KIL HD HR H+ IFE YYPP+L+DW++DDWI+ VYG TR+F + HHTG RY VD + L + +G+ +I Sbjct: 211 RHRLSAAAWRLRRQLELRVYIAYDVGDAFFDSRATEAAARVWLEARLVAPLRAAGIATRHALLRFPNPLRKPGPVFNFMMAAAAEDGAEYLYRVNDDTEFVDPWVEPAIRSLRSYSPPNVGVVGPVCAEGNAKILTHDLVHRHHLSIFEFYYPPVLSDWWMDDWITHVYG---TRRFTKGPFSVRHHTGAHGQRYAVDNAHKAALRGELQRGRQRI 423
BLAST of NO06G04580 vs. NCBI_GenBank
Match: GAX21566.1 (hypothetical protein FisN_6Hh461 [Fistulifera solaris]) HSP 1 Score: 164.9 bits (416), Expect = 5.000e-37 Identity = 98/285 (34.39%), Postives = 148/285 (51.93%), Query Frame = 0 Query: 81 DKSWKELVCPGPDVIPSRLLCSTYQ-YSDPVETLITILAGVSTRGV-SWTSPTELAPFRHLLPSIVRTVECG----FRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSP-WAYKFVRTLQGMGSPY-GVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMVMHN 358 D SWK + D + L+ S + ++D ++ I + T+ W S A L+PSI RTV R ++++G+D D F++ P ++ + I+ + V K+ + P FN++ + +Y GAD++ RVNDDSEF+SP W K V L P+ GVVGP C Q NTKIL HDF HRTH+DIF++YYP +W++DDWI+ VYG RT + + E+ HHT RY V+ ++ L L ++ + +E V N Sbjct: 29 DLSWKTTI----DELEGILIESGGENFADEADSQIVVAIVACTKSKDDWKSVNATALHNILIPSIERTVTPSETKHVRVDLVIGFDDNDPFWNDPQKRKEL---------QLSTRVPISFISVPKQPSRPFRIP---FNEVCKASYEYGADFIARVNDDSEFISPGWITKAVNRLSQYNPPWVGVVGPTCRQGNTKILTHDFVHRTHIDIFDNYYPDEFDNWWIDDWITYVYGPKRTTKLPDWEMFHHTSKHGQRYQVEQSLKRQL-PLSLRQGARQIELFVQRN 296
BLAST of NO06G04580 vs. NCBI_GenBank
Match: GAX17158.1 (hypothetical protein FisN_6Lh461 [Fistulifera solaris]) HSP 1 Score: 162.9 bits (411), Expect = 1.900e-36 Identity = 95/254 (37.40%), Postives = 140/254 (55.12%), Query Frame = 0 Query: 110 VETLITILAGVSTRGVSWTSPTELAPFRHLLPSIVRTV----ECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSP-WAYKFVRTLQGMGSPY-GVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMVMHN 358 ++ ++ I+A ++ W S A L+PSI RTV + R ++++G+D D F++ P ++ THV I+ + V K+ + P FN++ R +Y GAD++ RVNDDSEF++P W K V L P+ GVVGP C Q NT+IL HDF HRTHMDIFE+YYP +W++DDWI+ VYG RT + + E+ HHT RY V+ ++ L + +G +I E V N Sbjct: 66 LQIIVAIVACTKSKD-DWKSVETTALHNILIPSIERTVTPSEKKHVRVDLVVGFDDNDPFWNDPENRKKL--QASTHVP-------ISFISVPKQPSRPYRIP---FNEVCRASYEYGADFIARVNDDSEFITPGWITKGVNRLSHYNPPWVGVVGPTCRQGNTQILTHDFVHRTHMDIFENYYPDEFDNWWIDDWITYVYGPKRTTRLPDWEMFHHTSKHGQRYQVEQSLKRQLPLSLRRGAQQI-ELFVQQN 305
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_009014981.1 (hypothetical protein HELRODRAFT_170916 [Helobdella robusta] >ESO06885.1 hypothetical protein HELRODRAFT_170916 [Helobdella robusta]) HSP 1 Score: 148.7 bits (374), Expect = 3.700e-32 Identity = 83/233 (35.62%), Postives = 118/233 (50.64%), Query Frame = 0 Query: 136 FRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEF-LSPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYMVMHNVPNDEIEAF 367 FR LL S +T GF Y + +D D F+ T + + F + N + +N+ L L + + +P ND AY DY YR+NDD+ + W KF+ LQ P GVVGPW + NT IL HDF HRTH+DIF YYP + TDW+ DDWI+ VY R+++ + HT + +RY V Y + K +E + GKI+ + N ++E F Sbjct: 165 FRSLLTSFCQTATRGFHYNFYVSHDHSDDFFSTKNAHNIFSKAFYKLI-NTQCSRTVNVTLHLVECHHS-GRPAWAQNDAMMAAYMDEMDYYYRLNDDTVLETTGWTEKFIDELQRFNPPNIGVVGPWFKEGNTNILTHDFVHRTHIDIFGFYYPRVFTDWFADDWITQVYWPERSKKVPGTRV-KHTMEKGMRYMVHYEKAKNIE--IECSIGKIIIQRYIDRTINGKVEKF 392
BLAST of NO06G04580 vs. NCBI_GenBank
Match: EJK78038.1 (hypothetical protein THAOC_00083, partial [Thalassiosira oceanica]) HSP 1 Score: 141.4 bits (355), Expect = 6.000e-30 Identity = 84/224 (37.50%), Postives = 120/224 (53.57%), Query Frame = 0 Query: 138 HLLPSIVRTV----ECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPV-FNDIARMAYSRGADYLYRVNDDSEFL-SPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHR-THMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYM 354 HLL SI TV +R E+ILGYD D+F+ + +E+ R + + I + V + + ++P + FN++ + A GADY+ RVNDDSEF+ S W L+ P GVVGP C Q N I+ HDF H TH+ IF YYP + ++YLDDWI+ VYG+ RTR N E++HH RY + + K L++ V KG + Y+ Sbjct: 133 HLLSSIYDTVTPEERRDYRVELILGYDDTDEFWQSHT-RELRPRRKHGESGDYAGHEVIPLNFVSIRKDPDGKRPNRIPFNELCQAALEYGADYIARVNDDSEFVTSGWITVATEALRSFSPPNVGVVGPTCRQGNIDIMTHDFVHAPTHISIFGAYYPEVFDNYYLDDWITRVYGTARTRLLANFEVVHHLETFWTRYKATFDQDKLLDEQVAKGGQAVDSYL 355
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_009020934.1 (hypothetical protein HELRODRAFT_175241 [Helobdella robusta] >ESO00763.1 hypothetical protein HELRODRAFT_175241 [Helobdella robusta]) HSP 1 Score: 140.6 bits (353), Expect = 1.000e-29 Identity = 79/219 (36.07%), Postives = 108/219 (49.32%), Query Frame = 0 Query: 137 RHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSP-WAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYM 354 + L+PS RT G+ Y YD D + R F+ + + +N L K N + P ND AY DY YRVNDD++ L+P W +V LQ P GVVGP N IL +DF HR+H+DIF YYP + TDW+ D+WIS VYG RT + N+ ++ HT RY++ R K+L + +GK I Y+ Sbjct: 111 KSLVPSFCRTASSGYSYHFYASYDVRDTHFSKNTFMSAIHRTFRDIIGD-TCPTKLNASLYFVKC-NHNKNPAWAQNDAMMEAYLDHIDYYYRVNDDTKMLTPGWTEAYVDILQSFNPPNIGVVGPLHKGGNEDILTYDFVHRSHIDIFGSYYPRVFTDWWADNWISAVYGPVRTMKLPNVRLV-HTSEVGTRYSIRNDREKFLNAQIDQGKDIIERYL 326
BLAST of NO06G04580 vs. NCBI_GenBank
Match: ELU12342.1 (hypothetical protein CAPTEDRAFT_189487 [Capitella teleta]) HSP 1 Score: 137.5 bits (345), Expect = 8.600e-29 Identity = 91/259 (35.14%), Postives = 118/259 (45.56%), Query Frame = 0 Query: 102 STYQYSDPVETLITILAGVSTRGVSWTSP----TELAPFRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRW-FQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFLSP-WAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYM 354 STYQY E + I V+TR P E+ F+ L+ S T GF Y + +D D F+ F F T Q A +N+ L + + N P ND AY Y YRVNDD+ S W KF+ L P GVVGPW + N IL HDF HRTH+DIF YYP + TDW+ DDWI+ VY RTR+ ++ HT + RY Y + + V GK + Y+ Sbjct: 149 STYQYKG--ENTVAIGCAVTTRNQEGLKPDNMMLEMPFFKGLVSSFCLTATLGFNYHFYVAHDHYDSFFMARNDSHELFELAFYTLTQKTCAQ-GLNVSLHMVEC-NHSGNPAWAQNDAMMAAYMDNIAYYYRVNDDTLMESTGWTEKFIEELDRFNPPKVGVVGPWFKEGNIVILTHDFVHRTHVDIFGFYYPRVFTDWFADDWITGVYWPERTRKVPGTKV-KHTMERGQRYVAHYEKANKVRVEVEIGKLILKRYL 402
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_013407497.1 (uncharacterized protein LOC106171609 isoform X1 [Lingula anatina]) HSP 1 Score: 135.6 bits (340), Expect = 3.300e-28 Identity = 89/280 (31.79%), Postives = 136/280 (48.57%), Query Frame = 0 Query: 81 DKSWKELVCPGPDVIPSRLLCSTYQYSDPVETLITILAGVSTR---GVSWTSPTELAP-FRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKI-QKPGPVFNDIARMAYSRGADYLYRVNDDSEF-LSPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYM 354 D +W E+V R L S+ Y + + I I V+TR G+ + E P F+ +LP+ +T GF Y + +D+ D F++ + + F+ Q + A + I + L +E KP D +AY Y YR+NDD+ F S W F+ L P GVVGP N +IL +DF HRTHMDI+ YYP + T W+ D WIS VY +R + ++++ H G ++ RY VD+ R +Y + KGK + ++ Sbjct: 56 DSNWAEVV-SWRHQHTGRQLTSSDLYEE--DRRIAIGCAVTTRRIFGLDENNIKERLPLFKQMLPTFCKTASIGFNYTFFIAHDNNDPFFNM-MDAHLVFQ--QAFASVLTAYCSYKIAVSLHIIEVPYGSKPSWAQADAMLVAYLEDMPYFYRINDDTRFTTSGWTEAFISRLANFQPPNVGVVGPQHKGGNEEILTYDFVHRTHMDIYGVYYPRIFTTWWADQWISDVYSPSRFAKLPSVQVEHVQGFKS-RYDVDFSREQYFREEESKGKAYLARWL 328
BLAST of NO06G04580 vs. NCBI_GenBank
Match: XP_013407498.1 (uncharacterized protein LOC106171609 isoform X2 [Lingula anatina]) HSP 1 Score: 135.6 bits (340), Expect = 3.300e-28 Identity = 89/280 (31.79%), Postives = 136/280 (48.57%), Query Frame = 0 Query: 81 DKSWKELVCPGPDVIPSRLLCSTYQYSDPVETLITILAGVSTR---GVSWTSPTELAP-FRHLLPSIVRTVECGFRYEVILGYDSGDKFYDTPLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKI-QKPGPVFNDIARMAYSRGADYLYRVNDDSEF-LSPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTHRTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYM 354 D +W E+V R L S+ Y + + I I V+TR G+ + E P F+ +LP+ +T GF Y + +D+ D F++ + + F+ Q + A + I + L +E KP D +AY Y YR+NDD+ F S W F+ L P GVVGP N +IL +DF HRTHMDI+ YYP + T W+ D WIS VY +R + ++++ H G ++ RY VD+ R +Y + KGK + ++ Sbjct: 52 DSNWAEVV-SWRHQHTGRQLTSSDLYEE--DRRIAIGCAVTTRRIFGLDENNIKERLPLFKQMLPTFCKTASIGFNYTFFIAHDNNDPFFNM-MDAHLVFQ--QAFASVLTAYCSYKIAVSLHIIEVPYGSKPSWAQADAMLVAYLEDMPYFYRINDDTRFTTSGWTEAFISRLANFQPPNVGVVGPQHKGGNEEILTYDFVHRTHMDIYGVYYPRIFTTWWADQWISDVYSPSRFAKLPSVQVEHVQGFKS-RYDVDFSREQYFREEESKGKAYLARWL 324
BLAST of NO06G04580 vs. NCBI_GenBank
Match: EJK76449.1 (hypothetical protein THAOC_01789 [Thalassiosira oceanica]) HSP 1 Score: 134.0 bits (336), Expect = 9.500e-28 Identity = 83/229 (36.24%), Postives = 114/229 (49.78%), Query Frame = 0 Query: 138 HLLPSIVRTV----ECGFRYEVILGYDSGDKFYDT------PLGQEVTFRWFQTHVQNILANANINIMLVLKKVENKIQKPGPVFNDIARMAYSRGADYLYRVNDDSEFL-SPWAYKFVRTLQGMGSP-YGVVGPWCNQSNTKILNHDFTH-RTHMDIFEDYYPPLLTDWYLDDWISMVYGSTRTRQFENIEILHHTGNQNVRYTVDYYRRKYLEDLVVKGKGKILEYM 354 HLL SI TV FR E+ILGYD D ++ P ++ + + H +N + + K K P FN++ + A GA Y+ R+NDD+EFL S W L + P GVVGP C Q N +I+ HDF H TH+ IF YYP + +W+LDDWI+ VYG RTR + E+ HH + RY + + L+ V+KG I YM Sbjct: 153 HLLSSIYDTVTPEERRDFRVELILGYDDTDMYWQNHPKELRPRHKDGEYGEYDDH-----EVIPLNFVSIRKDPSGKRPNRIP-FNELFQAARDYGATYITRINDDTEFLTSGWITVATEALGSLSPPNVGVVGPTCKQGNVRIMTHDFVHASTHLSIFGTYYPEVFDNWFLDDWITRVYGRPRTRMLADFEVEHHFKSFGTRYKWSWADKWKLDHEVLKGGEAIDRYM 375 The following BLAST results are available for this feature:
BLAST of NO06G04580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04580 ID=NO06G04580|Name=NO06G04580|organism=Nannochloropsis oceanica|type=gene|length=5730bpback to top protein sequence of NO06G04580.1 >NO06G04580.1-protein ID=NO06G04580.1-protein|Name=NO06G04580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=381bpback to top protein sequence of NO06G04580.2 >NO06G04580.2-protein ID=NO06G04580.2-protein|Name=NO06G04580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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