NO06G04380, NO06G04380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_054165843.1 (short-chain dehydrogenase [alpha proteobacterium AAP38] >KPF88067.1 short-chain dehydrogenase [alpha proteobacterium AAP38]) HSP 1 Score: 208.8 bits (530), Expect = 2.400e-50 Identity = 125/255 (49.02%), Postives = 161/255 (63.14%), Query Frame = 0 Query: 39 LIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMGP-LNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 +IIG TGG G+ LA RL K H +HL++R ++ DLA +L A TH+ DV D +A A+ G + GLAYCVGSI +KPLKAT + DF+ AF LN +GAATA+RAA GL A G+VVLFS++AV+QGF NHA+I+ +KGA+ GL RA+AAE AP +RVN +APSLT TPLA L S M + IA HP+ RLG+ DD + D+ W+TGQ+L VDGGRS +R Sbjct: 6 IIIGATGGTGQALARRLAAKGHALHLVARDAVRVEDLAQNLGA-------THA-------VADVMAEDALADAVALGDRGEGIAGLAYCVGSIVIKPLKATRSADFLTAFNLNLLGAATALRAAEKGLKA------AKGAVVLFSTVAVEQGFTNHAVIAAAKGAVAGLGRAMAAEWAPHVRVNVIAPSLTRTPLAAPLLSSEQMAQGIAAMHPLARLGEADDLAAMADFLL-SADAGWITGQVLAVDGGRSTLR 239
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_072756003.1 (NAD(P)-dependent oxidoreductase [Thermomonas hydrothermalis] >SHE96854.1 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Thermomonas hydrothermalis]) HSP 1 Score: 208.8 bits (530), Expect = 2.400e-50 Identity = 123/256 (48.05%), Postives = 156/256 (60.94%), Query Frame = 0 Query: 36 GKYLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMG-PLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSV 291 GK L+ G TGGIG L RL + H +HL++R +L LA L A +T VDV A+++ G L+GLAY VGSINLKP T+ DF F+LN GAA AI+AALP L +A GE SVVLFSS+A +GFP HA I +K A+EGL RALAAELAPA+R+NA+APSLT+TPLAQ + + M+E+IA HP+ RLG DD + + W+TGQ++GVDGGR V Sbjct: 3 GKILVYGATGGIGSALCRRLASEGHALHLVARDAQRLQALADPLGAT----------------YTAVDVLQPGAVQQVAADAGSSLSGLAYAVGSINLKPFTRLTSEDFERDFRLNAAGAALAIQAALPAL----RAAGERASVVLFSSVAASRGFPMHASIGMAKAAVEGLVRALAAELAPAVRINAIAPSLTETPLAQGIVGNPRMRESIAAMHPLARLGTPDDIASLAAFLL-SPQADWITGQVIGVDGGRGV 237
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_102111883.1 (short-chain dehydrogenase [Niveispirillum cyanobacteriorum] >AUN30184.1 short-chain dehydrogenase [Niveispirillum cyanobacteriorum]) HSP 1 Score: 208.4 bits (529), Expect = 3.100e-50 Identity = 124/255 (48.63%), Postives = 161/255 (63.14%), Query Frame = 0 Query: 39 LIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMGP-LNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 +IIG TGG G+ LA RL K H +HL++R ++ DLA +L A +H+ DV D +A A+ G + GLAYCVGSI +KPLKAT + DF+ AF LN +GAATA+RAA GL A GSVVLFS++AV+QGF NHA+I+ +KGA+ GL RA+AAE AP +RVN +APSLT TPLA L S M + IA HP+ RLG+ DD ++D+ W+TGQ+L VDGGR +R Sbjct: 6 IIIGATGGTGQALARRLAAKGHALHLVARDAVRVEDLAQNLGA-------SHA-------VADVTAEDALADAVALGDRGDGIAGLAYCVGSIVIKPLKATRSADFLTAFNLNLLGAATALRAAEKGLKA------AKGSVVLFSTVAVEQGFTNHAVIAAAKGAVAGLGRAMAAEWAPHVRVNVIAPSLTRTPLAAPLLSSEQMAQGIAAMHPLGRLGEADDLAAMADFLL-SSDAGWITGQVLAVDGGRGTLR 239
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_090661011.1 (KR domain-containing protein [Belnapia rosea] >SDC46729.1 NADP-dependent 3-hydroxy acid dehydrogenase YdfG [Belnapia rosea]) HSP 1 Score: 206.8 bits (525), Expect = 8.900e-50 Identity = 123/258 (47.67%), Postives = 161/258 (62.40%), Query Frame = 0 Query: 36 GKYLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMG-PLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 G I+G TGGIG LA R+ + LI R + +L+ LA L A + T DVTD AL+ A+++ G PL+GLA+C+GSI +KPL DF E F LN AA AI+AA P L A G+ GSVVLFSS+A + GFP HA+I +K A+EGL+ ALAAELAP++RVN +APSLT T +A +T++ M EAIAK HPIPRLG+ +DA ++ S W+TGQ++GVDGGRS +R Sbjct: 3 GPIAILGATGGIGGALARRIAARGAVPFLIGRDEGRLSALAGELGAASAT----------------CDVTDPAALKAAVQAAGSPLSGLAFCIGSIVMKPLNRAMPADFAETFALNVTAAAMAIQAAAPAL-----AAGQ-GSVVLFSSVAARSGFPGHAVIGAAKAAVEGLSLALAAELAPSVRVNCIAPSLTRTGIATPMTKNPQMAEAIAKLHPIPRLGEAEDAAALADFLL-SDQSGWITGQVIGVDGGRSSLR 237
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_090562236.1 (SDR family NAD(P)-dependent oxidoreductase [Belnapia rosea] >SDB46025.1 NADP-dependent 3-hydroxy acid dehydrogenase YdfG [Belnapia rosea]) HSP 1 Score: 205.3 bits (521), Expect = 2.600e-49 Identity = 122/258 (47.29%), Postives = 159/258 (61.63%), Query Frame = 0 Query: 36 GKYLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMG-PLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 G I+G TGGIG LA R+ + LI R + +L LA L A + T DVTD AL+ A+++ G PL+GLA+C+GSI +KPL DF E F LN A AI+AA P L A G+ GSVVLFSS+A + GFP HA+I +K A+EGL+ ALAAELAP++RVN +APSLT T +A +T++ M EAIAK HPIPRLG+ +DA ++ S W+TGQ++GVDGGRS +R Sbjct: 3 GPIAILGATGGIGGALARRIAARGAVPFLIGRDEGRLAALAGELDAASAT----------------CDVTDPAALKAAVQAAGSPLSGLAFCIGSIVMKPLNRAMPADFAETFALNVTAGAMAIQAAAPAL-----AAGQ-GSVVLFSSVAARSGFPGHAVIGAAKAAVEGLSLALAAELAPSVRVNCIAPSLTRTGIAAPMTKNPQMAEAIAKLHPIPRLGEAEDAAALADFLL-SDQSGWITGQVIGVDGGRSSLR 237
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_039730711.1 (KR domain-containing protein [Lyngbya confervoides] >KIF38357.1 short-chain dehydrogenase [Lyngbya confervoides BDU141951]) HSP 1 Score: 204.5 bits (519), Expect = 4.400e-49 Identity = 119/259 (45.95%), Postives = 155/259 (59.85%), Query Frame = 0 Query: 35 VGKYLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMG-PLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 + KYLI GG GGIG +A L H +HL+ R+ D+L A L A T D+TD + A G L GL Y VG+INLKP+ T +DF+ F++N GAA AI+A+L L A G+ GSV+LFS++AVQQGF HA ++ +KGA+EGL RAL AELAP +RVNA+APSLT+TPLA + S MK+AI+ H IPR+G DD + SW+TGQ++GVDGGRS +R Sbjct: 1 MAKYLIYGGNGGIGNAVAKSLAQDGHALHLVGRNADELARAAGELGA----------------SHTVADITDADQIAHAAAEAGDDLAGLVYAVGTINLKPIGKLTHDDFLTDFRVNAAGAALAIKASLDALKA-----GQGGSVLLFSTVAVQQGFAAHASVAMAKGAVEGLVRALGAELAPKVRVNAIAPSLTETPLAGPMLASDQMKKAISSMHAIPRIGAPDDMAALARVLL-TDAGSWITGQVIGVDGGRSTLR 237
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_103120084.1 (KR domain-containing protein [Methylopila sp. Yamaguchi] >GBD47595.1 short-chain dehydrogenase [Methylopila sp. Yamaguchi]) HSP 1 Score: 203.8 bits (517), Expect = 7.600e-49 Identity = 124/257 (48.25%), Postives = 155/257 (60.31%), Query Frame = 0 Query: 39 LIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSM---GPLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 LI GG GG+G LA L + +HL R + +L LA L A FT DV + E+A G L GL Y VG+INLKPL TT+DF F+LN +GAA A++AALP L K A +V+LFS++AVQQGF NHA ++ +KGA+EGL RAL AELAP IRVNAVAPSLT+TPLA LTRS M AIA H +PRLG+ +D + ++SW+TGQ+ GVDGGRS +R Sbjct: 6 LIYGGAGGVGSALARALHGRGVALHLAGRDEAKLAALAEELGAT----------------FTAGDVLEDATFERATAEAAADGALGGLVYAVGTINLKPLAKLTTDDFETDFRLNALGAAKAVQAALPAL----KRAAGAPAVLLFSTVAVQQGFANHASVAMAKGAVEGLVRALGAELAPKIRVNAVAPSLTETPLAAPLTRSEQMSAAIAAMHALPRLGRPEDVAALGAFLL-SEEASWITGQVFGVDGGRSTLR 241
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_028839685.1 (KR domain-containing protein [Thermomonas fusca]) HSP 1 Score: 203.4 bits (516), Expect = 9.900e-49 Identity = 120/256 (46.88%), Postives = 155/256 (60.55%), Query Frame = 0 Query: 37 KYLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMG-PLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVV 292 KYL+ G TGG+G L RL + K+HL++R D+L L L A ++ VDV A+ + G L+GLAY +GSINLKP + T D F+LN VGAA A++AALP L +A SVVLFSS+A Q+GFP HA IS +K A+EGL R+LAA LAPA+R+NAVA SLTDTPLAQ +T + ++E+IA AHP+ RLG DDA + + W+TGQ+L VDGGR V Sbjct: 3 KYLVYGATGGVGSTLCRRLAAEGRKLHLVARDADRLRPLGEELGA----------------SWSAVDVLQADAITQVADEAGATLSGLAYAIGSINLKPFERVTAADMERDFRLNAVGAALAVQAALPAL----RAAPTRASVVLFSSVAAQRGFPMHASISMAKAAVEGLVRSLAAVLAPAVRINAVALSLTDTPLAQGMTNNPRLRESIAAAHPLGRLGTADDAAAMAAFLL-SAQADWITGQVLAVDGGRGAV 237
BLAST of NO06G04380 vs. NCBI_GenBank
Match: OUX08613.1 (short-chain dehydrogenase [Candidatus Pelagibacter sp. TMED239]) HSP 1 Score: 202.2 bits (513), Expect = 2.200e-48 Identity = 115/255 (45.10%), Postives = 164/255 (64.31%), Query Frame = 0 Query: 37 KYLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMG--PLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRS 290 K LI+G TG IG LA +++ +VHL+ R + L+DLAS L++ FT DV + +K +G P+NGLAYCVGSI+LKP+K T +D++++F LN + A IR A L Q+K GS+VLFS++AV++GF NH+I+S++KGAIEGLT +LAAE AP IRVN +APS++ + +A + ++ M ++IAK HP+ R+G+G D+ +N SSW+TGQILGVDGGRS Sbjct: 2 KKLILGATGSIGSSLAKKVIADGGEVHLVGRDKSSLSDLASELNST----------------FTTCDVLEENFSDKIFSDIGETPINGLAYCVGSIDLKPIKMTKKSDYMQSFNLNLISATEIIRRASDNL-KQNK-----GSIVLFSTVAVRRGFTNHSIVSSAKGAIEGLTVSLAAEFAPNIRVNCIAPSISKSKIANFILKNEKMADSIAKMHPLKRVGEGSDSASVANFLLSDN-SSWITGQILGVDGGRS 233
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_075215700.1 (SDR family NAD(P)-dependent oxidoreductase [Mongoliimonas terrestris]) HSP 1 Score: 200.7 bits (509), Expect = 6.400e-48 Identity = 123/265 (46.42%), Postives = 169/265 (63.77%), Query Frame = 0 Query: 38 YLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQL--------TDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMG--PLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 YLI GGTGG+G +A RLV + VHL++R +D+L T+ A++L +D++ PT S G+T DV D +A++ +G PL GL Y VG+INLKPL T DF+ + LNT+GAA AIRAA+ L +A G SV+LFS++A +QGF HA ++ +KG +EGL AL AELAP IRVNA+APSL +T L+ L S PM++AIA H +PRLG DD ++ ++W+TGQI+G+DGGRS +R Sbjct: 5 YLIYGGTGGLGSAIARRLVGRGAAVHLVARDEDRLKAFGAAPSTNQAATL---SDSSAPTGS----FAGYTAGDVADPETFIRAMQDVGDKPLKGLVYAVGTINLKPLGRLTDEDFLNDYILNTLGAARAIRAAVAHLA---RAEG-TSSVLLFSTVAARQGFAAHASVAAAKGGVEGLVHALGAELAPKIRVNAIAPSLVETELSAPLIASEPMRKAIAGLHALPRLGTPDDIAGIADMLL-SDGAAWITGQIIGIDGGRSTLR 257 The following BLAST results are available for this feature:
BLAST of NO06G04380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04380 ID=NO06G04380|Name=NO06G04380|organism=Nannochloropsis oceanica|type=gene|length=1648bpback to top protein sequence of NO06G04380.1 >NO06G04380.1-protein ID=NO06G04380.1-protein|Name=NO06G04380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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