NO06G04300, NO06G04300 (gene) Nannochloropsis oceanica

Overview
NameNO06G04300
Unique NameNO06G04300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2216
Alignment locationchr6:1206577..1208792 -

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Properties
Property NameValue
DescriptionDihydroorotate dehydrogenase (quinone), mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1206577..1208792 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0016020membrane
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR005720Dihydroorotate_DH
Homology
BLAST of NO06G04300 vs. NCBI_GenBank
Match: EWM26446.1 (dihydroorotate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 678.7 bits (1750), Expect = 1.500e-191
Identity = 339/449 (75.50%), Postives = 376/449 (83.74%), Query Frame = 0
Query:   82 AFLGALVAVDWLGNDGQVTIPTLYWLMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELK--EGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHREMQQQRQPHTPNILAIDVVGEGREEGELKGGKRKGWWRW 529
            A LG L AVD LGNDG++TIPTLYWLMDHPGM LLRSLDPETAHDWAIWALSKELVPAN TG  DR    L+VSLWD +CVFPNPVGVAAGFDKHA+A+KGLLGLGLGFVE+GSVTPRPQDGN KPRMFRLEEDRAVINRYGFNSHG+A V +RLQD+WE RLR  E+       G   G+VGVNVGKNKTTERAEEDYV G REL PYADYLV+NVSSPNTPGLRSLQRKGAF+SLI+AVQ+ELK   G   G  TNV GRRVPLLIKVAPDL+ EEKKDIAAVAL+TGIDGL+VSNTTV+RPP+L+SRHA ETGGLSG PLK+LATQT+HD Y LTG G++PIIGVGG+GSGQDAYDKI+AGASLVQVYSMLVYEGPGAVKRI +ELA LLERD Y  +S+AVGA HR  Q++     P+IL +D+V +G E    K   R  WW W
Sbjct:   91 AVLGTLTAVDLLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRR-GLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRRRQEE-----PHILTVDLVEKGTERVGKKDTGRGLWWGW 533          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: XP_005853378.1 (dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526] >XP_005855417.1 dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU20948.1 dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU22982.1 dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 663.7 bits (1711), Expect = 4.800e-187
Identity = 339/472 (71.82%), Postives = 374/472 (79.24%), Query Frame = 0
Query:   82 AFLGALVAVDWLGNDGQVTIPTLYWLMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELK--EGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQ-----------------------VYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHREMQQQRQPHTPNILAIDVVGEGREEGELKGGKRKGWWRW 529
            A LG L AVD LGNDG++TIPTLYWLMDHPGM LLRSLDPETAHDWAIWALSKELVPAN TG  DR    L+VSLWD  CVFPNPVGVAAGFDKHA+A+KGLLGLGLGFVE+GSVTPRPQDGN KPRMFRLEEDRAVINRYGFNSHG+A V +RLQD+WE RLR  E+       G   G+VGVNVGKNKTTERAEEDYV G REL PYADYLV+NVSSPNTPGLRSLQRKGAF+SLI+AVQ+ELK   G   G  TNV GRRVPLLIKVAPDL+ EEKKDIAAVAL+TGIDGL+VSNTTV+RPP L+SRHA ETGGLSG PLK+LATQT+HD Y LTG G++PIIGVGG+GSGQDAYDKI+AGASLVQ                       VYSMLVYEGPGAVKRI +ELA LLERD Y  +S+AVGA HR  Q++     P+IL +D+V +G E    K   R  WW W
Sbjct:   91 AVLGTLTAVDLLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDACVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRR-GLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPILRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVRKILDKGEGAAGNAREASVLRRVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRRRQEE-----PHILTVDLVEKGTERVGKKDTGRGLWWGW 556          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: GAX92853.1 (Hypothetical protein PINS_000734 [Pythium insidiosum])

HSP 1 Score: 400.2 bits (1027), Expect = 1.000e-107
Identity = 218/386 (56.48%), Postives = 272/386 (70.47%), Query Frame = 0
Query:  107 LMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDF-W-EERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHRE 491
            L D   M  +R  DPETAH  A+ + +  LVP +       D  +L+V++      FPNP+G+AAGFDK AEAM+GLL +G GFVEIGSVTP+PQ GN KPR+FRL EDRAVINRYGFNS GL  VAKRL+ + W  E L R  +           GV+GVN+GKNKTTE A  DYV+G + LG YADYLV+NVSSPNTPGLRSLQ K   + L+  V     E      +    GR +PLL+K+APDL+ ++KKDIA VAL   +DGL+VSNTT+SRP SL+S H  ETGGLSG P+++L+TQ + D+Y LTG G++P+IGVGGV SG+DAYDKI+AGASLVQ+YS LVY+GP A+ R  +EL  LL+ D YK V+EAVGA H +
Sbjct:   72 LSDPVIMPFVRLFDPETAHVIAVKSTALGLVPLD----EKTDDEILRVNVLGR--EFPNPLGMAAGFDKDAEAMEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLTEDRAVINRYGFNSQGLESVAKRLEAYMWRRENLSRWHR----------AGVLGVNLGKNKTTEDAAADYVEGVKALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELVSRVLTARDE------LVAQLGRPIPLLVKIAPDLTADDKKDIADVALALQLDGLIVSNTTLSRPESLKSEHKHETGGLSGAPVRELSTQVLSDMYKLTG-GRIPLIGVGGVSSGKDAYDKIKAGASLVQMYSCLVYDGPLAIPRAKKELVELLKADGYKSVTEAVGAAHTQ 434          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: XP_012208225.1 (dihydroorotate oxidase [Saprolegnia parasitica CBS 223.65] >KDO21044.1 dihydroorotate oxidase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 394.0 bits (1011), Expect = 7.200e-106
Identity = 212/382 (55.50%), Postives = 264/382 (69.11%), Query Frame = 0
Query:  107 LMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIH 489
            L D   M  +R  DPETAH  A+ A    L+P ++      D   LQV+ ++    F NP+G+AAGFDKHAEAM+GLL +G GFVEIGSVTP  Q GN KPR+FRL EDR VINRYGFNS G  VV KRLQ +    L      ER   A    G +G+N+GKNKT+     DYV G  +LGPY DYLVIN+SSPNTPGLRSLQ K   E+L+ AV +            N   +R+PLL+K+APDL+ E++KDIA VAL   IDGL+VSNTT+SRP SL S H  ETGGLSG P+KD++T+ +H +Y LT +GK+P+IGVGGV +GQDAY+KIRAGA+LVQ+YS LV++GP AV RI +ELAA L+RD +  V +A+GA H
Sbjct:   56 LCDPVLMPAVRLFDPETAHILAVKAAKYGLIPKDKR----HDDPSLQVTAFN--LTFDNPLGIAAGFDKHAEAMQGLLDMGFGFVEIGSVTPLAQSGNPKPRVFRLTEDRGVINRYGFNSVGADVVQKRLQRYAYWAL------ERPQYASVRAGPLGINLGKNKTSPSTIADYVAGVEKLGPYGDYLVINISSPNTPGLRSLQGKQELEALVAAVLE----------ARNKLWKRLPLLVKIAPDLTLEDQKDIADVALALQIDGLIVSNTTISRPESLHSEHKGETGGLSGAPVKDISTKVLHSMYALT-QGKIPLIGVGGVATGQDAYEKIRAGATLVQMYSCLVFDGPMAVPRIKEELAACLQRDGFASVHDAIGAAH 414          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: XP_008612597.1 (dihydroorotate oxidase [Saprolegnia diclina VS20] >EQC33802.1 dihydroorotate oxidase [Saprolegnia diclina VS20])

HSP 1 Score: 393.3 bits (1009), Expect = 1.200e-105
Identity = 211/383 (55.09%), Postives = 263/383 (68.67%), Query Frame = 0
Query:  107 LMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHR 490
            L D   M  +R  DPETAH  A+ A    L+P ++      D   L+V+ ++    F NP+G+AAGFDKHAEAM+GLL +G GFVEIGSVTP  Q GN KPR+FRL EDR VINRYGFNS G   V KRLQ +    L      ER   A    G +G+N+GKNKT+     DYV G  +LGPY DYLVIN+SSPNTPGLRSLQ K   E+L+ AV +            N   +R+PLL+K+APDL+ E++KDIA VAL   IDGL+VSNTT+SRP SL S H  ETGGLSG P+KD++T+ +H +Y LT  GK+P+IGVGGV +GQDAY+KIRAGA+LVQ+YS LVY+GP AV RI +ELAA L+RD +  V +A+GA H+
Sbjct:   57 LCDPVLMPAVRLFDPETAHILAVKAAKYGLIPKDKR----HDDPSLKVTAFN--LTFDNPLGIAAGFDKHAEAMQGLLDMGFGFVEIGSVTPLAQSGNPKPRVFRLTEDRGVINRYGFNSVGADAVQKRLQRYAYWAL------ERPQYASVRAGPLGINLGKNKTSPSTIADYVAGVEKLGPYGDYLVINISSPNTPGLRSLQGKQELEALVAAVLE----------ARNKLWKRLPLLVKIAPDLTPEDQKDIADVALALQIDGLIVSNTTISRPESLTSEHKGETGGLSGAPVKDISTKVLHSMYALT-HGKIPLIGVGGVATGQDAYEKIRAGATLVQMYSCLVYDGPMAVPRIKEELAACLQRDGFASVHDAIGAAHK 416          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: BAD12565.1 (dihydroorotate dehydrogenase [Euglena gracilis])

HSP 1 Score: 392.9 bits (1008), Expect = 1.600e-105
Identity = 222/402 (55.22%), Postives = 269/402 (66.92%), Query Frame = 0
Query:  102 PTLYW-----LMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRR---------VPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHR 490
            P L+W     + D+  M L+R L+ E AHD AI A S  LVP +       D A L++ +W GL  F NP+G+AAGFDKH EA+  LLG G GFVEIG+VTP PQ GN  PRMFRLE+DRA+INRYGFNS GLA V KRL    E R  R             GG+VGVNVGKNK  E A  DY +G RELGPYADYLVINVSSPNTPGLR+LQ++ A   LI+A      E      V +  GRR         +PLLIK+APDL+ EEK+DIA V ++T IDGL+VSNTTVSRP SL S H  +TGGLSG PL++++TQ I D+Y LT RG VPI+GVGGV +G+D  +K++AGASLVQ+YSMLVY+GPGA  R+ + L   L R+ +     AVGA HR
Sbjct:   47 PELFWGSFAVVADNVAMPLVRLLEAEAAHDCAIRAASWGLVPRD----VHPDPADLEMEVW-GL-KFSNPLGLAAGFDKHGEAVDALLGTGFGFVEIGTVTPLPQPGNPSPRMFRLEQDRAIINRYGFNSQGLAAVRKRL----EARQHR---------PAPRGGLVGVNVGKNKLQEDAAADYSKGLRELGPYADYLVINVSSPNTPGLRNLQKRSAMADLIKASMVARDE-----VVRDADGRRAAAGKSAAPLPLLIKIAPDLTAEEKQDIAEVVMETKIDGLIVSNTTVSRPASLLSPHKGQTGGLSGAPLREMSTQAIRDMYALT-RGTVPIVGVGGVATGEDVLEKLKAGASLVQMYSMLVYDGPGAPPRVKKGLLQALRREHFGSARSAVGADHR 423          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: OQS03681.1 (dihydroorotate dehydrogenase, mitochondrial precursor [Thraustotheca clavata])

HSP 1 Score: 391.0 bits (1003), Expect = 6.100e-105
Identity = 208/390 (53.33%), Postives = 270/390 (69.23%), Query Frame = 0
Query:  102 PTLYWLMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQD--FWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHR 490
            P L    D   M  +R  DPETAH  A+ A   +L+P ++      D  +L+VS+++    F NP+G+AAGFDKHAEAM+GLL +G GFVEIGSVTP PQ GN KPR+FRL EDR VINRYGFNS G   V + L    +W    R+  KN R        G +G+N+GKNKT+    +DYV G  +LGP+ DYLVIN+SSPNTPGLR+LQ K   E+L+ AV +            N   +R+PLL+K+APDL+ E++KDIA VAL   IDGL+VSNTT++RP SLQS H  ETGGLSG P+K+++T+ +H +Y LT +G++P+IGVGGV +G+DAY+KIRAGA+LVQ+YS LVY+GP AV RI +ELAA L+RD +  V  AVGA H+
Sbjct:   47 PLLKKFCDPTLMPFVRLFDPETAHILAVKAAKYDLIPKDKC----YDDPILKVSVFN--MTFENPLGIAAGFDKHAEAMQGLLDMGFGFVEIGSVTPLPQSGNPKPRVFRLTEDRGVINRYGFNSIGADAVQRHLTKYAYWTVE-RQQRKNIR-------SGPLGINLGKNKTSPSTIDDYVSGVEKLGPFGDYLVINISSPNTPGLRALQGKQELETLVSAVLE----------ARNKLWKRLPLLVKIAPDLTAEDQKDIADVALSLKIDGLIVSNTTITRPDSLQSSHKGETGGLSGAPVKEISTKVLHSMYKLT-KGQIPLIGVGGVATGEDAYEKIRAGATLVQMYSCLVYDGPMAVPRIKEELAACLKRDGFDSVKAAVGAAHK 411          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: XP_009523918.1 (hypothetical protein PHYSODRAFT_557375 [Phytophthora sojae] >EGZ21201.1 hypothetical protein PHYSODRAFT_557375 [Phytophthora sojae])

HSP 1 Score: 389.4 bits (999), Expect = 1.800e-104
Identity = 210/379 (55.41%), Postives = 265/379 (69.92%), Query Frame = 0
Query:  111 PGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHR 490
            P M ++R  DPETAH  A+      L P +     + D  LL+V    GL  FPNP+G+AAGFDKH EAM+G+L +G G VEIGSVTP+PQ GN +PR+FRL EDR VINRYGFNS GL  V  RL+ +   R +R     R        GV+GVN+GKNK TE A  DYV+G   LG YADYLV+NVSSPNTPGLR+LQ K   ++L+  V K   E      V     RR+PLL+K+APDL+ ++K+DIA VAL+  +DGLVVSNTT+SRP +L+     ETGGLSGLP++DL+T+ + D+Y LT +G++P+IGVGGV +GQDAYDKIRAGASLVQ+YS L+YE P AV R  +EL ALL RD Y+ V++AVGA H+
Sbjct:   70 PMMPVVRLFDPETAHQVAVQCARFGLTPKD----PEADPELLRVQAL-GL-EFPNPLGIAAGFDKHGEAMEGMLDMGFGCVEIGSVTPKPQPGNPQPRVFRLPEDRGVINRYGFNSKGLEYVGDRLERYVGSRAKRQGNGHR-------AGVLGVNLGKNKLTEDAASDYVRGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQNLLVRVLKARDE------VAAKEERRIPLLVKIAPDLTEDDKQDIADVALELKLDGLVVSNTTLSRPDTLKGEAKGETGGLSGLPVRDLSTKVLGDMYKLT-KGQIPLIGVGGVSTGQDAYDKIRAGASLVQMYSCLIYESPLAVPRAKKELVALLRRDGYESVADAVGAAHK 428          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: ETM02393.1 (dihydroorotate dehydrogenase (fumarate) [Phytophthora parasitica])

HSP 1 Score: 387.1 bits (993), Expect = 8.700e-104
Identity = 210/379 (55.41%), Postives = 260/379 (68.60%), Query Frame = 0
Query:  111 PGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHR 490
            P M ++R  +PETAH  A+      L P +     + D  LL V    GL  F NP+G+AAGFDKH EAM+G+L +G G VEIGSVTP+PQ GN  PR+FRL EDR VINRYGFNS GL  V  RL+ +   R +R E   R        GV+GVN+GKNK TE A  DYVQG   LG YADYLV+NVSSPNTPGLR+LQ K   + L+  V K   E      V     R +PLL+K+APDL+ ++K+DIA VAL+  +DGLVVSNTT+SRP +L+     ETGGLSGLP++DL+T+ + D+Y LT +G++P+IGVGGV +GQDAYDKIRAGASLVQ+YS L+YE P AV R  +ELAALL RD Y  V+EAVG  H+
Sbjct:   66 PMMPVVRLFEPETAHKIAVQCARFGLTPKD----PETDPELLHVKAL-GL-EFTNPLGIAAGFDKHGEAMEGMLDMGFGCVEIGSVTPKPQPGNPTPRVFRLAEDRGVINRYGFNSKGLEYVGARLERYVGSRAKRQENGHR-------AGVLGVNLGKNKLTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQKLLERVLKARDE------VAATEKRNIPLLVKIAPDLTEDDKQDIADVALELKVDGLVVSNTTLSRPDTLKGAAKGETGGLSGLPVRDLSTKVLGDMYKLT-KGQIPLIGVGGVSTGQDAYDKIRAGASLVQMYSCLIYESPLAVPRAKKELAALLSRDGYTSVTEAVGTAHK 424          
BLAST of NO06G04300 vs. NCBI_GenBank
Match: ETM55635.1 (dihydroorotate dehydrogenase (fumarate) [Phytophthora parasitica])

HSP 1 Score: 387.1 bits (993), Expect = 8.700e-104
Identity = 210/379 (55.41%), Postives = 260/379 (68.60%), Query Frame = 0
Query:  111 PGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHR 490
            P M ++R  +PETAH  A+      L P +     + D  LL V    GL  F NP+G+AAGFDKH EAM+G+L +G G VEIGSVTP+PQ GN  PR+FRL EDR VINRYGFNS GL  V  RL+ +   R +R E   R        GV+GVN+GKNK TE A  DYVQG   LG YADYLV+NVSSPNTPGLR+LQ K   + L+  V K   E      V     R +PLL+K+APDL+ ++K+DIA VAL+  +DGLVVSNTT+SRP +L+     ETGGLSGLP++DL+T+ + D+Y LT +G++P+IGVGGV +GQDAYDKIRAGASLVQ+YS L+YE P AV R  +ELAALL RD Y  V+EAVG  H+
Sbjct:   66 PMMPVVRLFEPETAHKIAVQCARFGLTPKD----PETDPELLHVKAL-GL-EFTNPLGIAAGFDKHGEAMEGMLDMGFGCVEIGSVTPKPQPGNPTPRVFRLAEDRGVINRYGFNSKGLEYVGARLERYVGSRAKRQENGHR-------AGVLGVNLGKNKLTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQKLLERVLKARDE------VAATEKRNIPLLVKIAPDLTEDDKQDIADVALELKVDGLVVSNTTLSRPDTLKGAAKGETGGLSGLPVRDLSTKVLGDMYKLT-KGQIPLIGVGGVSTGQDAYDKIRAGASLVQMYSCLIYESPLAVPRAKKELAALLSRDGYTSVTEAVGTAHK 424          
The following BLAST results are available for this feature:
BLAST of NO06G04300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26446.11.500e-19175.50dihydroorotate dehydrogenase [Nannochloropsis gadi... [more]
XP_005853378.14.800e-18771.82dihydroorotate dehydrogenase [Nannochloropsis gadi... [more]
GAX92853.11.000e-10756.48Hypothetical protein PINS_000734 [Pythium insidios... [more]
XP_012208225.17.200e-10655.50dihydroorotate oxidase [Saprolegnia parasitica CBS... [more]
XP_008612597.11.200e-10555.09dihydroorotate oxidase [Saprolegnia diclina VS20] ... [more]
BAD12565.11.600e-10555.22dihydroorotate dehydrogenase [Euglena gracilis][more]
OQS03681.16.100e-10553.33dihydroorotate dehydrogenase, mitochondrial precur... [more]
XP_009523918.11.800e-10455.41hypothetical protein PHYSODRAFT_557375 [Phytophtho... [more]
ETM02393.18.700e-10455.41dihydroorotate dehydrogenase (fumarate) [Phytophth... [more]
ETM55635.18.700e-10455.41dihydroorotate dehydrogenase (fumarate) [Phytophth... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL088nonsL088Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR049ncniR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR144ngnoR144Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000005NSK000005Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04300.3NO06G04300.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G04300.2NO06G04300.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G04300.1NO06G04300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624072gene_9605Nannochloropsis oceanica (N. oceanica CCMP1779)gene
DHODgene4071Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04300.3NO06G04300.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G04300.2NO06G04300.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G04300.1NO06G04300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04300 ID=NO06G04300|Name=NO06G04300|organism=Nannochloropsis oceanica|type=gene|length=2216bp
AAGCACCTGTAGGAACAGTGAAGTCAAGGCGCAAAGCTTGGAATACCAGC
CGCTGCGTGCTTACTTCCGTGAGACTGTCGCTTACCATCATCACAAACCA
TGCTGCACCGACTTGCCCATGCGACCACCCGCCGGGCTCCATTCGATGCT
GCCAGGGCCGTCTCCTCCTCCTCATCGTCCTTAAGgtgcatatggagacc
gcggtttttcattgtctttttcggctgattttcatccccatcatcccctc
gatcgagctcgccagtgatgtcccctcctatacacatcacatgctgcaac
agGCGCGTACCTAATGCCAAGCTTCTCCTCCCTCCCCGGCGTGCCTCTTT
CTCTTCCTCCCCATCTACTGCTTCCACGGCGTCTGCTTCAAAGCTGTCCC
CACCCGATGCCACCCCTCCTCCCCCCGCCTCGATGATCAACCTCCTCTCT
ACCGCCGCCGCCTTTCTAGGGGCGCTAGTAGCTGTCGACTGGCTTGGCAA
TGATGGACAAGTCACCATTCCCACGTTGTACTGGCTGATGGACCATCCGG
GTATGGCTTTGCTGCGGAGTCTTGACCCCGAGACAGCGCACGACTGGGCC
ATTTGGGCTCTGAGCAAGGAGCTGGTGCCAGCCAACCGCACAGGCCCTTC
AGACAGGGATAGTGCCCTGCTGCAGGTGTCGCTGTGGGATGGATTGTGTG
TCTTCCCGAACCCGGTGGGTGTGGCGGCGGGCTTCGACAAGCATGCGGAG
GCAATGAAAGGACTGCTGGGTCTGGGGCTGGGGTTTGTGGAGATCGGGAG
CGTCACGCCTCGGCCGCAAGACGGTAATGCCAAGCCACGCATGTTTAGGT
TGGAGGAGGACCGGGCCGTCATCAACCGTTATGGCTTTAATTCGCACGGC
CTGGCGGTGGTGGCGAAGCGCCTTCAGGACTTCTGGGAGGAGCGACTGAG
GCGCGGGGAAAAGAATGAGAGGGGAGCCGTAGCAGGAGCAGCAGGAGGGG
TAGTAGGCGTGAATGTCGGCAAGAACAAGACGACGGAGAGGGCGGAGGAG
GACTATGTGCAGGGTGCTCGGGAGCTTGGCCCTTATGCCGATTATCTGGT
CATTAATGTTTCCAGCCCCAACACGCCGGGTCTCAGGTCCTTGCAGCGGA
AGGGTGCTTTCGAGTCCCTCATTCGGGCAGTGCAGAAGGAATTGAAGGAG
GGTGGGAAGGCGGGGCCTGTCACCAACGTGCACGGTCGACGCGTGCCTCT
GCTCATCAAGGTCGCGCCTGATCTGTCTGGGGAGGAAAAAAAAGACATTG
CAGCCGTGGCTCTCAAGACAGGTATTGACGGGCTGGTGGTCTCAAACACC
ACCGTCTCCCGCCCCCCCTCCCTCCAGTCCCGACACGCCACCGAAACAGG
GGGGTTGAGCGGGCTGCCTCTTAAGGACTTGGCCACGCAGACCATCCACG
ATCTTTACCTACTTACGGGGCGGGGCAAAGTACCCATAATAGGTGTGGGT
GGAGTCGGCTCGGGCCAGGATGCGTACGATAAGATACGGGCGGGTGCCTC
GTTGGTGCAGGTGAGAGGACGGGAAGGAGGGAAGGAGGACGAAAAGAAGG
GGGTTTTTCAGGCTGGATGAAGCGCTTCCCCATGACTTTGTGAGGAATTA
GCACTCTGTCCTTTCCTTTCCGCGCACTTTCCATCACTGATCACATTTTC
ATACCTCCTAATCCTCCCTTTTCCTCTCAACTCCCTCCCTCCCTAGGTAT
ACAGCATGTTGGTGTACGAGGGCCCAGGAGCAGTCAAACGGATCACGCAA
GAGCTGGCGGCCTTGCTGGAACGAGACGAGTACAAGCACGTCAGTGAGGC
GGTGGGTGCGATTCATCGAGAGATGCAGCAGCAGCGGCAGCCGCACACGC
CGAATATCCTCGCCATTGACGTGGTCGGAGAAGGGAGGGAGGAGGGAGAG
CTGAAGGGGGGGAAGAGAAAGGGGTGGTGGAGGTGGTTATCACGGGGTTG
AGGAGAGAGAGAGGGGGGGAGGGAGGAAGGGAGAGAGGAAACAAGGAGCA
TGTACACTAGTAGAGGGAATATGATAAAAGACGCACGATATTCACAAGGC
TGCTCCTTGGTTTTTCCTCATTTTCATTGTTGGTTTATGTTGCTAATTTT
ATGAAGGCATTTTGGCGAGTGCTGATATGCTGCCATCGCTTTTGCCGTCG
GTCCTGCTCAACGCTG
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protein sequence of NO06G04300.3

>NO06G04300.3-protein ID=NO06G04300.3-protein|Name=NO06G04300.3|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MLHRLAHATTRRAPFDAARAVSSSSSSLRRVPNAKLLLPPRRASFSSSPS
TASTASASKLSPPDATPPPPASMINLLSTAAAFLGALVAVDWLGNDGQVT
IPTLYWLMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSA
LLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRP
QDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKN
ERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSS
PNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVA
PDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGL
PLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVR
GREGGKEDEKKGVFQAG*
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protein sequence of NO06G04300.2

>NO06G04300.2-protein ID=NO06G04300.2-protein|Name=NO06G04300.2|organism=Nannochloropsis oceanica|type=polypeptide|length=516bp
MSPPIHITCCNRRVPNAKLLLPPRRASFSSSPSTASTASASKLSPPDATP
PPPASMINLLSTAAAFLGALVAVDWLGNDGQVTIPTLYWLMDHPGMALLR
SLDPETAHDWAIWALSKELVPANRTGPSDRDSALLQVSLWDGLCVFPNPV
GVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRPQDGNAKPRMFRLEEDRA
VINRYGFNSHGLAVVAKRLQDFWEERLRRGEKNERGAVAGAAGGVVGVNV
GKNKTTERAEEDYVQGARELGPYADYLVINVSSPNTPGLRSLQRKGAFES
LIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVAPDLSGEEKKDIAAVALK
TGIDGLVVSNTTVSRPPSLQSRHATETGGLSGLPLKDLATQTIHDLYLLT
GRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVYSMLVYEGPGAVKRITQE
LAALLERDEYKHVSEAVGAIHREMQQQRQPHTPNILAIDVVGEGREEGEL
KGGKRKGWWRWLSRG*
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protein sequence of NO06G04300.1

>NO06G04300.1-protein ID=NO06G04300.1-protein|Name=NO06G04300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp
MLHRLAHATTRRAPFDAARAVSSSSSSLRRVPNAKLLLPPRRASFSSSPS
TASTASASKLSPPDATPPPPASMINLLSTAAAFLGALVAVDWLGNDGQVT
IPTLYWLMDHPGMALLRSLDPETAHDWAIWALSKELVPANRTGPSDRDSA
LLQVSLWDGLCVFPNPVGVAAGFDKHAEAMKGLLGLGLGFVEIGSVTPRP
QDGNAKPRMFRLEEDRAVINRYGFNSHGLAVVAKRLQDFWEERLRRGEKN
ERGAVAGAAGGVVGVNVGKNKTTERAEEDYVQGARELGPYADYLVINVSS
PNTPGLRSLQRKGAFESLIRAVQKELKEGGKAGPVTNVHGRRVPLLIKVA
PDLSGEEKKDIAAVALKTGIDGLVVSNTTVSRPPSLQSRHATETGGLSGL
PLKDLATQTIHDLYLLTGRGKVPIIGVGGVGSGQDAYDKIRAGASLVQVY
SMLVYEGPGAVKRITQELAALLERDEYKHVSEAVGAIHREMQQQRQPHTP
NILAIDVVGEGREEGELKGGKRKGWWRWLSRG*
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Synonyms
Publications