NO06G04290, NO06G04290 (gene) Nannochloropsis oceanica

Overview
NameNO06G04290
Unique NameNO06G04290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1891
Alignment locationchr6:1204664..1206554 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1204664..1206554 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO06G04290 vs. NCBI_GenBank
Match: EWM26454.1 (hypothetical protein Naga_100144g13 [Nannochloropsis gaditana])

HSP 1 Score: 556.2 bits (1432), Expect = 8.100e-155
Identity = 259/344 (75.29%), Postives = 294/344 (85.47%), Query Frame = 0
Query:   53 RSPLSLTSIPSARTPLPCLWQIRSDQQHTEDYFRFIEGKEAPEKVDQPSVIIGKGKLGQALAEWSTFGKDDVLVDRGETIPLTLTAANGTVYESFPIYVCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVPYFSVSPLGLPIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKGLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRLRGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLVLYDVDME 397
            RSP     +P +R  L  LWQIRSDQQHTEDYFRFIEGKE P+K DQ SVIIGKGKLGQAL +W   G+DD+L+ R + IP  LT +NG     FPIYVCV EW+VE VIL CPKEKRNDLVFMQSACLE LLK+YGL NKKTTQC+PYFS+SP GLP++GRVQYDVSKTDGEPK+AGQT VCG WRGAVAERL+K+ LHV  MDY YWRK MLERLLFDS+FGLLACVHA SGEKTYGELAQNHWEEIDD++ EL+RA+ANIMAVVLLTHV+RR+RGLAEGP WRD++P+M T +EYP+RNG+LRSLSR+FTSRGFPSPM THDEYL+F +ERKLV YDVD +
Sbjct:   57 RSPCPHEDLPHSRKSLVRLWQIRSDQQHTEDYFRFIEGKEEPDKCDQASVIIGKGKLGQALVQWGGMGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDVDQD 400          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: XP_005853379.1 (hypothetical protein NGA_0116102 [Nannochloropsis gaditana CCMP526] >XP_005855420.1 hypothetical protein NGA_0116101 [Nannochloropsis gaditana CCMP526] >EKU20951.1 hypothetical protein NGA_0116101 [Nannochloropsis gaditana CCMP526] >EKU22983.1 hypothetical protein NGA_0116102 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 387.1 bits (993), Expect = 6.500e-104
Identity = 177/221 (80.09%), Postives = 202/221 (91.40%), Query Frame = 0
Query:  176 MQSACLENLLKKYGLCNKKTTQCVPYFSVSPLGLPIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKGLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRLRGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLVLYDVDME 397
            MQSACLE LLK+YGL NKKTTQC+PYFS+SP GLP++GRVQYDVSKTDGEPK+AGQT VCG WRGAVAERL+K+ LHV  MDY YWRK MLERLLFDS+FGLLACVHA SGEKTYGELAQNHWEEIDD++ EL+RA+ANIMAVVLLTHV+RR+RGLAEGP WRD++P+M T +EYP+RNG+LRSLSR+FTSRGFPSPM THDEYL+F +ERKLV YDVD +
Sbjct:    1 MQSACLETLLKRYGLANKKTTQCLPYFSISPFGLPVEGRVQYDVSKTDGEPKFAGQTVVCGTWRGAVAERLRKQDLHVEVMDYTYWRKHMLERLLFDSLFGLLACVHADSGEKTYGELAQNHWEEIDDMVWELSRAIANIMAVVLLTHVERRVRGLAEGPHWRDRKPQMPTCREYPFRNGMLRSLSRSFTSRGFPSPMPTHDEYLDFVRERKLVSYDVDQD 221          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: XP_005837652.1 (hypothetical protein GUITHDRAFT_151218 [Guillardia theta CCMP2712] >EKX50672.1 hypothetical protein GUITHDRAFT_151218 [Guillardia theta CCMP2712])

HSP 1 Score: 228.8 bits (582), Expect = 3.000e-56
Identity = 128/325 (39.38%), Postives = 189/325 (58.15%), Query Frame = 0
Query:   73 QIRSDQQHTEDYFRFIEGKEAPEKVDQPSVIIGKGKLGQALAEWSTFGKDDVLVDRGETIPLTLTAANGTVYESFPIYVCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVPYFSV-SPLGLPIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKGL---HVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRLRGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLVLYDV 394
            Q+ S+ Q  E+Y   + GKE    VD PSVI+G G++G+ L      G DDV+V RG  IP           ESFP+YVCV   ++E VI +CP+ K +DLVF+Q   +E +LKKY LC  + TQ +PYF++ S  G P D  V    +   GEPKYAG+TS+CG W GA+ +RL +      H  TM Y  WR+ MLE+++FDSVF L+  ++ G    + GE+ Q+H EE  ++++E+ R++   +AV L+  V+ RL   ++     +   R    ++YP+RNG   + S+     GFP P   H EYL  AKE+ ++ +D+
Sbjct:   46 QVWSNPQALEEYQDLLSGKEQVASVDTPSVIVGGGRVGEMLR--GAGGGDDVVVGRGGQIPEVHEG-----LESFPVYVCVPTSELENVIRSCPQSKLDDLVFVQDGMIEPILKKYALCGNENTQMLPYFTLFSKGGRPQDSLVDLG-TDAYGEPKYAGETSICGKWAGALKQRLDRLNFCHRHSRTMFYRDWRRAMLEKVIFDSVFPLVGALNKGI---SIGEVGQSHTEECQEMITEIARSLPGTLAVTLMYGVEERLFAYSQHD---NVEFRPCKIEQYPFRNGFWYTFSQQAKQIGFPDPTPMHSEYLELAKEKGIIDFDL 356          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: CBN75305.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 219.5 bits (558), Expect = 1.800e-53
Identity = 130/332 (39.16%), Postives = 185/332 (55.72%), Query Frame = 0
Query:   73 QIRSDQQHTEDYFRFIEGKEAPEKVDQPSVIIGKGKLGQALAEWSTFGKDDVLVDRGETIPLTLTAANG-------TVYESFPIYVCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVPYFSVSPLGLPIDGRV--QYDVSKTD--GEPKYAGQTSVCGLWRGAVAERLKKK--GLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRLRGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLVLY 392
            Q+ S+ Q  +DY   ++G    + +DQPSVIIG+GKLG ALA       +DV++ RGE IP +L  ++G        + ++FPIYVCV E +V  VI +CP +K++DLVFM S CLE LLK  G+C  + TQ   YFSV  +G    GR      V  TD  GEPK AG+T+VCG W+GA A RL++   GLH  T  Y+ WR+ M E+L+FD    L+  +H      T G + Q H EE+ D+L EL   + + +AV L+     RL  +A G    D++     A+ + + N     +S T     F  P   H EYLN+ K++ +  +
Sbjct:    2 QVWSNPQAVQDYKDLLDGNAPEDTIDQPSVIIGRGKLGTALASMGM--GEDVVLGRGEAIPDSLPCSSGKGEDGEPAMLQNFPIYVCVPEEEVAAVIDSCPDDKKDDLVFMSSGCLEPLLKSRGMCRGEQTQATLYFSVDKVG----GRAVDAMTVIGTDGRGEPKLAGETAVCGKWKGAFAMRLQQSPFGLHCSTEYYLEWRRVMFEKLIFDCAVNLVGALHK---FPTVGYVVQYHAEELVDMLFELKNTLRSTLAVSLMNGYPERL--IAYGDQVGDRQTTRMDARTFKWYNEFFYDISNTALKAKFGDPCPMHTEYLNYGKDKGIFTF 322          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: EWM23770.1 (hypothetical protein Naga_100411g4 [Nannochloropsis gaditana] >EWM23771.1 hypothetical protein Naga_100411g4 [Nannochloropsis gaditana] >EWM23772.1 hypothetical protein Naga_100411g4 [Nannochloropsis gaditana] >EWM23773.1 hypothetical protein Naga_100411g4 [Nannochloropsis gaditana])

HSP 1 Score: 187.6 bits (475), Expect = 7.600e-44
Identity = 86/109 (78.90%), Postives = 100/109 (91.74%), Query Frame = 0
Query:  234 VCGLWRGAVAERLKKKGLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRLRGLAEGPSWRDKRP 343
            +CG WRGAVAERL+KK LHV  MD  YWR+QMLERLLF S+FGLLACVHAGSGEKTY +LAQNHWE+IDD++ EL+RAVANIMAVVLLT+V+RR+RGLAEGPSWRD++P
Sbjct:    1 MCGTWRGAVAERLRKKDLHVEVMDCTYWRRQMLERLLFGSIFGLLACVHAGSGEKTYVQLAQNHWEKIDDMVRELSRAVANIMAVVLLTYVERRVRGLAEGPSWRDRKP 109          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: XP_005718399.1 (unnamed protein product [Chondrus crispus] >CDF38506.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 144.4 bits (363), Expect = 7.400e-31
Identity = 110/351 (31.34%), Postives = 171/351 (48.72%), Query Frame = 0
Query:   30 AHAPTAPVTAFFTSTTVISSLSSRSPLSLTSIPSART--PLPCLWQIRSDQQHTEDYFRFIEGKEAPE-KVDQPSVIIGKGKLGQALAEWSTFGKDDVLVDRGETIPLTLTAANGTVYESFPIYVCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVPYFSVSPLGL-PIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKGLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRLRGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATH 377
            A  PT+P T+   + T         P    S+   RT        Q  SD   T++YF F+      E   D  S I+G G++G  L E  T    D+++ RG+ IP     A G      P+Y+C     +EE+I  CP+ K++DLVF+Q+  LE +L+++ +   + T+   YF++S +   PIDG     +++T+ E    G T+VCG W GA  ER+ K GL    +    +R+  LE+L++ SVF L+  VH   G    GE+AQ H  E+ ++  EL   +   + V +L  +++R+  LA G   R  +      +E+ +RNG     S      GFP P   H
Sbjct:    2 AFVPTSPQTSLHGTFTA-------RPAHRCSVQRPRTVHRQALRMQTWSDPAVTQEYFDFLNNVNQRELMTDCTSTIVGSGRIGNFLREHGT--GQDLVIRRGQKIP---EDAPG------PVYLCTRNDDLEEIIENCPESKKDDLVFIQNGMLERMLRRHDM--SENTRANLYFAISKMDADPIDG-----ITETNPE----GLTAVCGKWEGAFQERILKAGLTCKILKERDFRRSQLEKLIWISVFNLIGAVH---GNIPMGEVAQMHEREVTELSIELAHMIRFTLTVGMLPDIEKRM--LAYG---RRVKEFPTALKEFEWRNGFFYKYSMLARKNGFPDPTPMH 315          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: XP_007023535.2 (PREDICTED: uncharacterized protein LOC18595499 isoform X1 [Theobroma cacao])

HSP 1 Score: 138.7 bits (348), Expect = 4.000e-29
Identity = 102/296 (34.46%), Postives = 149/296 (50.34%), Query Frame = 0
Query:  100 PSVIIGKGKLGQALAEWSTFGK-DDVLVDRGETIPLTLTAANGTVYESFPIYVCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVPYFSVSPLG-LPIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKGLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRL----RGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLV 390
            PSVI+G G++G+AL +    GK DD+LV RGE +PL             PI VC     +E V+ A PK + +DLVF Q+  LE  L+  GL      Q + YF+VS LG  P+DG       KTD  P+  G T+  G W  A+A RL   GL    +D   ++KQMLE+L++ S F L+   H G+   T G++ + +  E+  +++EL  A A    +     ++ RL    R +A  P+           +E+ +RNG   S+S    + G P P   H  +L   KE K+V
Sbjct:   54 PSVIVGGGRVGKALQD---MGKGDDLLVKRGEPVPLDFEG---------PILVCTRNDDLESVLEATPKSRWDDLVFFQNGMLEPWLQSKGL--NDADQVLAYFAVSKLGEPPVDG-------KTDTNPE--GLTAAYGKWASAIATRLHAGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGAHHPGA---TVGDVEKEYRSEVSSLIAELASAAAGEKGITFEEAMEDRLCAYSRAVAHFPT---------AVKEFKWRNGWFYSISEKAIAEGKPDPCPLHTAWL---KELKVV 311          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: KDO46114.1 (hypothetical protein CISIN_1g021746mg [Citrus sinensis])

HSP 1 Score: 137.5 bits (345), Expect = 9.000e-29
Identity = 103/296 (34.80%), Postives = 148/296 (50.00%), Query Frame = 0
Query:  100 PSVIIGKGKLGQALAEWSTFGK-DDVLVDRGETIPLTLTAANGTVYESFPIYVCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVPYFSVSPLG-LPIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKGLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRL----RGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLV 390
            P+ I+G G++G AL E    GK  D+LV RGE +PL             PI+VC     +E V+ A P+ + NDLVF Q+  +E  L+  GL  K   Q + YF+VS LG  PIDG       KTD  P+  G T+  G W   VAERL   GL    +D   ++KQMLE+L++ S F L+   H G+   T G + + +  E+  +++EL  A A    +     ++ RL    R +A  P+           +E+ +RNG   SLS   ++ G P P   H  +L   KE K+V
Sbjct:   51 PAAIVGGGRVGTALKE---MGKGQDLLVKRGELVPLDFEG---------PIFVCTRNDDLEAVLEAAPRSRWNDLVFFQNGMIEPWLESKGL--KDANQVLAYFAVSKLGERPIDG-------KTDTNPE--GLTAAYGKWASVVAERLSVGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGARHTGA---TVGVVEKEYRSEVSALIAELALAAAAEKGITFDPAMEDRLCAYSRAVANFPT---------AVKEFKWRNGWFYSLSEKASAEGKPDPCPLHTAWL---KEIKVV 308          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: EOY26157.1 (Uncharacterized protein TCM_027572 isoform 2 [Theobroma cacao])

HSP 1 Score: 137.1 bits (344), Expect = 1.200e-28
Identity = 102/296 (34.46%), Postives = 148/296 (50.00%), Query Frame = 0
Query:  100 PSVIIGKGKLGQALAEWSTFGK-DDVLVDRGETIPLTLTAANGTVYESFPIYVCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVPYFSVSPLG-LPIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKGLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRL----RGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLV 390
            PSVI+G G++G+AL +    GK DD+LV RGE +PL             PI VC     +E V+ A PK + +DLVF Q+  LE  L+  GL      Q + YF+VS LG  P+DG       KTD  P+  G T+  G W  A+A RL   GL    +D   ++KQMLE+L++ S F L+   H G+   T G++ + +  E+  +++EL  A A    +     ++ RL    R +A  P+           +E+ +RNG   S+S      G P P   H  +L   KE K+V
Sbjct:   54 PSVIVGGGRVGKALQD---MGKGDDLLVKRGEPVPLDFEG---------PILVCTRNDDLESVLEATPKSRWDDLVFFQNGMLEPWLQSKGL--NDADQVLAYFAVSKLGEPPVDG-------KTDTNPE--GLTAAYGKWASAIATRLHAGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGARHPGA---TVGDVEKEYRSEVSSLIAELASAAAGEKGITFEGAMEDRLCAYSRAVAHFPT---------AVKEFKWRNGWFYSISEKAIVEGKPDPCPLHTAWL---KELKVV 311          
BLAST of NO06G04290 vs. NCBI_GenBank
Match: XP_006493453.1 (PREDICTED: uncharacterized protein LOC102621850 [Citrus sinensis])

HSP 1 Score: 137.1 bits (344), Expect = 1.200e-28
Identity = 103/296 (34.80%), Postives = 148/296 (50.00%), Query Frame = 0
Query:  100 PSVIIGKGKLGQALAEWSTFGK-DDVLVDRGETIPLTLTAANGTVYESFPIYVCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVPYFSVSPLG-LPIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKGLHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEEIDDILSELNRAVANIMAVVLLTHVDRRL----RGLAEGPSWRDKRPRMATAQEYPYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLV 390
            P+ I+G G++G AL E    GK  D+LV RGE +PL             PI+VC     +E V+ A P+ + NDLVF Q+  +E  L+  GL  K   Q + YF+VS LG  PIDG       KTD  P+  G T+  G W   VAERL   GL    +D   ++KQMLE+L++ S F L+   H G+   T G + + +  E+  +++EL  A A    +     ++ RL    R +A  P+           +E+ +RNG   SLS   ++ G P P   H  +L   KE K+V
Sbjct:  101 PAAIVGGGRVGTALKE---MGKGQDLLVKRGELVPLDFEG---------PIFVCTRNDDLEAVLEATPRSRWNDLVFFQNGMIEPWLESKGL--KDANQVLAYFAVSKLGERPIDG-------KTDTNPE--GLTAAYGKWASVVAERLSVGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGARHTGA---TVGVVEKEYRSEVSALIAELALAAAAEKGITFDPAMEDRLCAYSRAVANFPT---------AVKEFKWRNGWFYSLSEKASAEGKPDPCPLHTAWL---KEIKVV 358          
The following BLAST results are available for this feature:
BLAST of NO06G04290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26454.18.100e-15575.29hypothetical protein Naga_100144g13 [Nannochlorops... [more]
XP_005853379.16.500e-10480.09hypothetical protein NGA_0116102 [Nannochloropsis ... [more]
XP_005837652.13.000e-5639.38hypothetical protein GUITHDRAFT_151218 [Guillardia... [more]
CBN75305.11.800e-5339.16conserved unknown protein [Ectocarpus siliculosus][more]
EWM23770.17.600e-4478.90hypothetical protein Naga_100411g4 [Nannochloropsi... [more]
XP_005718399.17.400e-3131.34unnamed protein product [Chondrus crispus] >CDF385... [more]
XP_007023535.24.000e-2934.46PREDICTED: uncharacterized protein LOC18595499 iso... [more]
KDO46114.19.000e-2934.80hypothetical protein CISIN_1g021746mg [Citrus sine... [more]
EOY26157.11.200e-2834.46Uncharacterized protein TCM_027572 isoform 2 [Theo... [more]
XP_006493453.11.200e-2834.80PREDICTED: uncharacterized protein LOC102621850 [C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL088nonsL088Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR049ncniR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR144ngnoR144Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000003NSK000003Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04290.1NO06G04290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605104gene_9604Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100144g13gene4069Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04290.1NO06G04290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04290 ID=NO06G04290|Name=NO06G04290|organism=Nannochloropsis oceanica|type=gene|length=1891bp
CGACAATATGCTCCAGCACACGACAAGAATCTACACATGCATGCACGAAG
TACGGCTTTTAAAATATTGATGCGTGTCACACAGTGTGTGGTGGTATACT
TATTGACAAACAAAGACGTGGAACCAGGAGGGATGGGTCCTTGAAGGCCC
ATCGGAGGGACTGGCGATGCCGCATGCGTATCTTACGATGCATGGCAGTA
ATCGCGACGCAGATACACACAACACACATTTCCATGCATGATTGGACAGG
TAACATTAAAAACTAAGCGACGGACTGCAATAAATAGGAGGGAGTGCAAG
CATTGAGTCGAGGAAATGACGCCGCCGCAGCAGCATCAGCATCACTGGCC
GTCGTCGTTGCAGTTGCTTCTTCTCCTTTCAAGTGCCCATGCTTTTATCC
CGGCTCATGCTCCCACTGCTCCTGTGACAGCTTTCTTCACATCTACTACG
GTCATCTCCAGCCTTTCTTCCCGATCCCCCCTCTCTCTAACCTCCATCCC
CTCTGCCCGCACGCCCCTCCCTTGCCTCTGGCAAATTCGCTCCGACCAAC
AGCACACCGAAGACTACTTCCGCTTTATCGAAGGCAAAGAGgtgtgttca
tgtgctagaaccgagcgtagagataaagaaggaaggagcaagccccttcc
acgtgcctctgctgccaatttgccaatttggtcgtcgcttttaaagagag
cgagctatccatttagtgcccctcctgtctagacctcttttgttgttcat
cgtccgttctctcctccaagagacatctcagaccactgccttgcaaaatg
ttcactttcgtctctcattctcttccttttttctctccatccttagGCCC
CGGAGAAGGTTGATCAGCCCAGTGTCATTATCGGCAAGGGCAAGTTGGGT
CAAGCACTAGCTGAGTGGAGCACCTTCGGAAAAGATGACGTGCTTGTGGA
CCGTGGGGAAACCATTCCACTCACACTTACGGCCGCCAACGGCACTGTTT
ACGAGAGCTTCCCGATCTATGTGTGTGTGCATGAGTGGCAAGTAGAGGAG
GTGATCTTAGCGTGTCCCAAGGAAAAGAGAAATGACCTGGTGTTCATGCA
GTCTGCATGCCTAGAAAATCTCCTGAAGAAGTATGGCCTATGCAACAAAA
AGACCACACAATGCGTCCCCTACTTCTCTGTGTCCCCTCTTGGCCTTCCC
ATAGATGGCCGAGTGCAGTACGACGTGAGCAAGACGGATGGCGAGCCGAA
GTACGCGGGGCAGACGTCTGTGTGTGGCCTATGGCGCGGGGCGGTCGCCG
AGCGACTCAAGAAGAAGGGGCTGCATGTGGTCACGATGGATTACATGTAC
TGGCGGAAGCAGATGTTGGAGCGCTTATTGTTCGATAGTGTGTTTGGCCT
CCTGGCGTGCGTGCATGCGGGCTCGGGGGAGAAGACGTACGGCGAGCTGG
CCCAAAACCACTGGGAGGAGATCGACGACATACTCTCAGAGCTAAATCGC
GCTGTAGCAAACATCATGGCGGTCGTTTTGCTCACACATGTGGACCGACG
CCTGCGGGGACTGGCGGAGGGGCCCAGTTGGCGGGACAAGAGGCCTCGAA
TGGCCACGGCGCAGGAGTACCCTTATCGAAACGGTGTGCTGCGGTCGTTG
AGTAGGACCTTTACGTCGCGCGGCTTTCCCTCCCCCATGGCCACCCACGA
CGAGTACCTGAACTTCGCCAAGGAGCGAAAGCTAGTGTTGTACGATGTGG
ACATGGAGCGCTAGGATGGGAGCTGTTGAAGGGAGGCAGTAGGGTGCTTT
GTTTTATAGGGGAGGAGAGGGGAGTGAATGGCGAGACGGAAATAGAAATC
ATTGGGCGCAGAAAGCACAACCTTTGAATGTTTATGGCAAC
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protein sequence of NO06G04290.1

>NO06G04290.1-protein ID=NO06G04290.1-protein|Name=NO06G04290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bp
MTPPQQHQHHWPSSLQLLLLLSSAHAFIPAHAPTAPVTAFFTSTTVISSL
SSRSPLSLTSIPSARTPLPCLWQIRSDQQHTEDYFRFIEGKEAPEKVDQP
SVIIGKGKLGQALAEWSTFGKDDVLVDRGETIPLTLTAANGTVYESFPIY
VCVHEWQVEEVILACPKEKRNDLVFMQSACLENLLKKYGLCNKKTTQCVP
YFSVSPLGLPIDGRVQYDVSKTDGEPKYAGQTSVCGLWRGAVAERLKKKG
LHVVTMDYMYWRKQMLERLLFDSVFGLLACVHAGSGEKTYGELAQNHWEE
IDDILSELNRAVANIMAVVLLTHVDRRLRGLAEGPSWRDKRPRMATAQEY
PYRNGVLRSLSRTFTSRGFPSPMATHDEYLNFAKERKLVLYDVDMER*
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Synonyms
Publications