NO06G04120, NO06G04120 (gene) Nannochloropsis oceanica

Overview
NameNO06G04120
Unique NameNO06G04120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3698
Alignment locationchr6:1153826..1157523 -

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphoglycerate kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1153826..1157523 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004618phosphoglycerate kinase activity
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR036043Phosphoglycerate_kinase_sf
IPR001576Phosphoglycerate_kinase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO06G04120 vs. NCBI_GenBank
Match: XP_005535003.1 (phosphoglycerate kinase [Cyanidioschyzon merolae strain 10D] >BAD36768.1 phosphoglycerate kinase, chloroplast precursor, partial [Cyanidioschyzon merolae] >BAM80396.1 phosphoglycerate kinase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 579.7 bits (1493), Expect = 7.800e-162
Identity = 291/413 (70.46%), Postives = 340/413 (82.32%), Query Frame = 0
Query:   42 APVCPSNRQGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPKGK-EDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            APVC       V M  +S+  L DAE++GKRVFVR DLNVPLDGK+ITDDTRIRASVPTI+YLA KGAKV++ SHLGRPKG  EDKYSLAPVA+RL+ELLGKKV    DCIG+ V + VA ++ GDV LLENVRFYPEEEKN P FA KLAANADLYVNDAFGTAHRAH STEGV+ FLKPAVAGFLL+KELDYL  A+  PKRPFAAIVGGSKVSTKI V+E L+ K D I+IGGGMVFTFL+ARG   G SLVEEDK++LAR +E  A K+G++ +LP DVV+ADKFA DAN+KVV    IP+GWMGLDNGPE+T+MIQ +L   KT++WNGP+GVFE   FA GT AIA+T+AE+T  G  TIVGGGDSVAA+E++G ADK+SH+STGGGA+LEL+EG+VLPGVAAL  +
Sbjct:   67 APVCVQTSD--VAMRVRSIRDLQDAEIRGKRVFVRSDLNVPLDGKRITDDTRIRASVPTIKYLADKGAKVIVVSHLGRPKGGFEDKYSLAPVAERLSELLGKKVRMAKDCIGDAVATEVAAMSPGDVVLLENVRFYPEEEKNDPDFARKLAANADLYVNDAFGTAHRAHASTEGVTAFLKPAVAGFLLEKELDYLSNAIESPKRPFAAIVGGSKVSTKIAVLEKLLQKCDTIIIGGGMVFTFLRARGLKTGSSLVEEDKIELARVIEEEARKRGIELLLPLDVVVADKFANDANTKVVPVEEIPDGWMGLDNGPETTRMIQEKLRTMKTVLWNGPLGVFEMPNFAKGTFAIAETLAEITQNGCITIVGGGDSVAAMEQSGKADKVSHISTGGGAALELIEGRVLPGVAALQRA 477          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: XP_024532689.1 (phosphoglycerate kinase 3, cytosolic [Selaginella moellendorffii] >XP_024532690.1 phosphoglycerate kinase 3, cytosolic [Selaginella moellendorffii])

HSP 1 Score: 578.2 bits (1489), Expect = 2.300e-161
Identity = 295/405 (72.84%), Postives = 337/405 (83.21%), Query Frame = 0
Query:   50 QGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGK-KITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPKGKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            +GVV MAKKSV  L +A+LKGKRVFVR DLNVPLDG  KITDDTRIRA+VPTI+YL S GAKV+L+SHLGRPKG  DKY L P+  RL+ELLG KV    D IG  V   VA L +G V LLENVRFYPEEEKNVP  A+KLAA ADLYVNDAFGTAHRAH STEGV+KFLKP+VAGFLLQKELDYLDGAVS PKRPFAAIVGGSKVS+KI VIE+L+ K + +++GGGM+FTF KA+G +VG SLVEEDK+DLA+ L   A  KGV  +LPTDVV+ADKFA DANSK+V +TAIP+GWMGLD GP+S K     L   KT+IWNGPMGVFEFDKFA GT A+A+ +AEL+ KG TTI+GGGDSVAAVEK G+ADK+SH+STGGGASLELLEGKVLPGVAAL+E+
Sbjct:   82 RGVVCMAKKSVGDLKEADLKGKRVFVRADLNVPLDGDLKITDDTRIRAAVPTIKYLISNGAKVILSSHLGRPKGVTDKYRLTPLVPRLSELLGIKVEKADDSIGPEVEKKVAALPDGGVLLLENVRFYPEEEKNVPEHAQKLAALADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCNILLLGGGMIFTFFKAQGLSVGSSLVEEDKIDLAKSLMKTAKDKGVSLLLPTDVVVADKFAADANSKIVPSTAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAVAKKLAELSGKGVTTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGVAALDEA 486          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: XP_024533078.1 (phosphoglycerate kinase 3, cytosolic [Selaginella moellendorffii] >XP_024533079.1 phosphoglycerate kinase 3, cytosolic [Selaginella moellendorffii] >XP_024533080.1 phosphoglycerate kinase 3, cytosolic [Selaginella moellendorffii])

HSP 1 Score: 577.8 bits (1488), Expect = 3.000e-161
Identity = 295/405 (72.84%), Postives = 337/405 (83.21%), Query Frame = 0
Query:   50 QGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGK-KITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPKGKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            +GVV MAKKSV  L +A+LKGKRVFVR DLNVPLDG  KITDDTRIRA+VPTI+YL S GAKV+L+SHLGRPKG  DKY L P+  RL+ELLG KV    D IG  V   VA L +G V LLENVRFYPEEEKNVP  A+KLAA ADLYVNDAFGTAHRAH STEGV+KFLKP+VAGFLLQKELDYLDGAVS PKRPFAAIVGGSKVS+KI VIE+L+ K + +++GGGM+FTF KA+G +VG SLVEEDK+DLA+ L   A  KGV  +LPTDVV+ADKFA DANSK+V +TAIP+GWMGLD GP+S K     L   KT+IWNGPMGVFEFDKFA GT A+A+ +AEL+ KG TTI+GGGDSVAAVEK G+ADK+SH+STGGGASLELLEGKVLPGVAAL+E+
Sbjct:   82 RGVVCMAKKSVGDLKEADLKGKRVFVRADLNVPLDGDLKITDDTRIRAAVPTIKYLISNGAKVILSSHLGRPKGVTDKYRLTPLVPRLSELLGIKVEKADDSIGPEVEKKVAALPDGGVLLLENVRFYPEEEKNVPEHAQKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCNILLLGGGMIFTFYKAQGLSVGSSLVEEDKIDLAKSLMRTAKDKGVSLLLPTDVVVADKFAADANSKIVPSTAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAVAKKLAELSGKGVTTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGVAALDEA 486          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: AAK40345.1 (phosphoglycerate kinase [Chondrus crispus])

HSP 1 Score: 577.4 bits (1487), Expect = 3.900e-161
Identity = 305/451 (67.63%), Postives = 356/451 (78.94%), Query Frame = 0
Query:    4 TGLVTLLSVASAQAFVAPAMFKAASAGSLTTATSAVTAAPVCPSNRQGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            T  V+++S  SA  FVAP+    A A  + T      AA              KKS+  LS A++ GKRV VRCDLNVPLDGK ITDDTRIRASVPTI++L   GAKVLL+SHLGRPK G EDK+SL+PVA RLT+LLGK VT  PDCIG+ VT  V+G+A GDV LLENVRFY EE KN P FA+KLAANAD +VNDAFGTAHRAHGST GV+  LKP+VAG LL+KEL YL G VS P RPFAAIVGGSKVS+KI VI++L+ KVDK++IGGGMVFTFLKA+G NVG SLVE+DKL+LAREL   A  KGV  ILPTDVV+ADKFA DAN++V +  +IP+GWMGLD G +STK+IQ EL +CKT+IWNGPMGVFE +KFA GT AIA T+A+LT  G  TI+GGGDSVAAVEKAGLA+K+SH+STGGGASLELLEGKVLPGVAAL+++
Sbjct:   19 TAAVSVVS-RSASTFVAPSRRVTAPAAPVPTVRMTTAAA------------TTKKSIKDLSPADIAGKRVLVRCDLNVPLDGKTITDDTRIRASVPTIKFLMEAGAKVLLSSHLGRPKDGPEDKFSLSPVAARLTQLLGKDVTMAPDCIGDGVTKIVSGMANGDVTLLENVRFYKEETKNDPDFAKKLAANADFFVNDAFGTAHRAHGSTAGVTAHLKPSVAGLLLEKELAYLAGTVSDPARPFAAIVGGSKVSSKIGVIDSLLQKVDKLIIGGGMVFTFLKAKGLNVGSSLVEDDKLELARELVKTAEAKGVSIILPTDVVLADKFAADANTQVTSVDSIPDGWMGLDQGEDSTKLIQNELKECKTVIWNGPMGVFEMEKFAKGTFAIADTLADLTESGCITIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDN 456          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: XP_002951648.1 (phosphoglycerate kinase [Volvox carteri f. nagariensis] >Q9SBN4.1 RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor >AAD55564.1 phosphoglycerate kinase precursor [Volvox carteri f. nagariensis] >EFJ47459.1 phosphoglycerate kinase [Volvox carteri f. nagariensis])

HSP 1 Score: 575.9 bits (1483), Expect = 1.100e-160
Identity = 296/404 (73.27%), Postives = 338/404 (83.66%), Query Frame = 0
Query:   52 VVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGK--KITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNE 453
            VV   KKSV  L  A+L+GKRVFVR DLNVPLD K   ITDDTRIRA+VPT++YL   GAKVLLTSHLGRPK G EDKY L PV  RL+ELLGK+V  V DCIG +V  AVA L  G++ LLENVRFY EEEKN P FA+KLA+NADLYVNDAFGTAHRAH STEGV+KFLKP+VAGFLLQKELDYLDGAVS PKRPF AIVGGSKVS+KITVIE L+ K DKI+IGGGM+FTF KARG  VG SLVEEDKL+LA+ LEA+A  KGV+ +LP+DVV+ADKF  +AN++ V+  AIP+GWMGLD GP+S K  Q  LAD KT++WNGPMGVFEF KFA GT AIA T++ELT KGA TI+GGGDSVAAVE+AG+A+K+SH+STGGGASLELLEGKVLPGVAAL+E
Sbjct:   58 VVEAVKKSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKEVKKVDDCIGPSVEQAVASLKSGELLLLENVRFYKEEEKNDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSAPKRPFVAIVGGSKVSSKITVIEKLMEKCDKIIIGGGMIFTFYKARGLKVGSSLVEEDKLELAKNLEAIAKAKGVQLLLPSDVVVADKFDANANTQTVSVEAIPDGWMGLDIGPDSIKTFQDALADAKTVVWNGPMGVFEFPKFAVGTVAIANTLSELTPKGAITIIGGGDSVAAVEQAGVAEKMSHISTGGGASLELLEGKVLPGVAALDE 461          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: KXZ41979.1 (pgk1 [Gonium pectorale])

HSP 1 Score: 575.9 bits (1483), Expect = 1.100e-160
Identity = 307/442 (69.46%), Postives = 355/442 (80.32%), Query Frame = 0
Query:   17 AFVAPAM--FKAASAGSLTTATSAVTAAPVCPSNRQGVVTMA-KKSVSSLSDAELKGKRVFVRCDLNVPLDGK--KITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNE 453
            A VAP +  F + S  +L +  +   A  +  + R  VV  A KKSV  L  A+L+GKRVFVR DLNVPLD K   ITDDTRIRA+VPT++YL   GAKVLLTSHLGRPK G EDKY L PV  RL+ELLGK V  V DCIG  V  AV+ L  G++ LLENVRFY  EEKN P FA+KLAANADLYVNDAFGTAHRAH STEGV+K+L P+VAGFLLQKELDYLDGAVS PKRPF AIVGGSKVS+KITVIE+L++KVDKI+IGGGM+FTF KARG + G SLVEE++L+LA+ LE LA  KGV+ +LPTDVV+ADKF P+AN++ V  TAIP+GWMGLD GP+S K  QA LAD KT++WNGPMGVFEF KFA GT +IA T+AELT KGA TI+GGGDSVAAVE+AG+ADK+SH+STGGGASLELLEGKVLPGVAALNE
Sbjct:   20 AAVAPRVVPFSSVSRPTLRSTFAPEVAIDIRRAGRSRVVVEAVKKSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLQYLLDNGAKVLLTSHLGRPKDGPEDKYRLTPVVGRLSELLGKPVKKVDDCIGPDVEKAVSELKNGELLLLENVRFYKAEEKNEPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIESLLDKVDKIIIGGGMIFTFYKARGLSTGSSLVEENQLELAKTLEELAKTKGVQLLLPTDVVVADKFDPEANTQTVPVTAIPDGWMGLDIGPDSIKAFQAALADAKTVVWNGPMGVFEFPKFATGTVSIANTLAELTPKGAITIIGGGDSVAAVEQAGVADKMSHISTGGGASLELLEGKVLPGVAALNE 461          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: CBN75623.1 (phosphoglycerate kinase [Ectocarpus siliculosus])

HSP 1 Score: 572.4 bits (1474), Expect = 1.300e-159
Identity = 302/445 (67.87%), Postives = 354/445 (79.55%), Query Frame = 0
Query:   10 LSVASAQAFVAPAMFKAASAGSLTTATSAVTAAPVCPSNRQGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            L V +  AFVAP++ K+  A       S+ +AAP+          + K SV  L D +LKGK+V VRCDLNVPL  K I DDTRIRAS+PTIE+L SKGA+V L+SHLGRPK G EDK+SL PVA+RLT+LLGK     PDC+G+ V     GL +G+V LLENVRFYP E KN   FAEKLAA  DL+VNDAFGTAHRAH STEGV+KFL P+VAGFLLQKELDYL GAV +PKRPFAAIVGGSKVS+KI VIE+L+ K DK++IGGGMVFTFLKARG  VG SLVEEDKL+LA+ELE  A   GV+ ILP+DVV+AD FA DA ++VV A AIP+GWMGLDNGPE+TK IQA L +CKT++WNGPMGVFE++ FA GT AIA T+AE+T++G TTIVGGGDSVAAVEKA LADK+SH+STGGGASLELLEGKVLPGVAALN++
Sbjct:    8 LCVQAVGAFVAPSVVKSGLA-----RASSRSAAPM---QMMADAVVKKLSVGDLKDEDLKGKKVLVRCDLNVPLSDKVIGDDTRIRASIPTIEHLLSKGARVALSSHLGRPKDGPEDKFSLGPVAERLTKLLGKDCKMAPDCVGDEVAKIADGLGDGEVMLLENVRFYPAETKNDKDFAEKLAAPFDLFVNDAFGTAHRAHCSTEGVTKFLSPSVAGFLLQKELDYLAGAVQEPKRPFAAIVGGSKVSSKIGVIESLLAKCDKLIIGGGMVFTFLKARGLGVGSSLVEEDKLELAKELEEKAKTAGVEIILPSDVVVADAFAADAKTQVVKADAIPDGWMGLDNGPEATKEIQAALKECKTVVWNGPMGVFEYEAFAKGTFAIADTLAEITSEGCTTIVGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKVLPGVAALNDA 444          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: KVI02340.1 (Phosphoglycerate kinase [Cynara cardunculus var. scolymus])

HSP 1 Score: 572.4 bits (1474), Expect = 1.300e-159
Identity = 294/414 (71.01%), Postives = 341/414 (82.37%), Query Frame = 0
Query:   41 AAPVCPSNRQGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPL-DGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPKGKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            A P+ P     +V+MAKKSV  LS A+LKGK+VFVR DLNVPL D + ITDDTRIRA++PTI+YL + GAKV+L+SHLGRPKG   KYSLAP+  RL+EL+G +V    DC+G  V   VA LAEG V LLENVRFY EEEKN PAFAEKLA+ ADLYVNDAFGTAHRAH STEGV+KFL+P+VAGFLLQKELDYLDGAVS PKRPFAAIVGGSKVS+KI VIE+L+ K D +++GGGM+FTF KA+G +VG SLVEEDKLDLA  L A A +KGV  +LPTDVV+ADKFAPDANSK+V A+AIP+GWMGLD GP+S K     L   KT+IWNGPMGVFEFDKFA GT AIA+ +AEL+ KG TTI+GGGDSVAAVEK G+AD +SH+STGGGASLELLEGK LPGV AL+E+
Sbjct:   62 AKPITP-----IVSMAKKSVGDLSPAQLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKYLITNGAKVILSSHLGRPKGVTPKYSLAPLVSRLSELIGIQVVKADDCVGPEVEKLVASLAEGGVLLLENVRFYKEEEKNDPAFAEKLASIADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATTLLAKAKEKGVSLLLPTDVVVADKFAPDANSKIVPASAIPDGWMGLDIGPDSIKTFNDALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGVADVMSHISTGGGASLELLEGKTLPGVDALDEA 470          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: EFJ26731.1 (hypothetical protein SELMODRAFT_267533 [Selaginella moellendorffii])

HSP 1 Score: 572.0 bits (1473), Expect = 1.600e-159
Identity = 294/411 (71.53%), Postives = 337/411 (82.00%), Query Frame = 0
Query:   50 QGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGK-KITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPKGKEDKYSLAPVADRLTELLGKKVTF------VPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            +GVV MAKKSV  L +A+LKGKRVFVR DLNVPLDG  KITDDTRIRA+VPTI+YL S GAKV+L+SHLGRPKG  DKY L P+  RL+ELLG K +         D IG  V   VA L +G V LLENVRFYPEEEKNVP  A+KLAA ADLYVNDAFGTAHRAH STEGV+KFLKP+VAGFLLQKELDYLDGAVS PKRPFAAIVGGSKVS+KI VIE+L+ K + +++GGGM+FTF KA+G +VG SLVEEDK+DLA+ L   A  KGV  +LPTDVV+ADKFA DANSK+V +TAIP+GWMGLD GP+S K     L   KT+IWNGPMGVFEFDKFA GT A+A+ +AEL+ KG TTI+GGGDSVAAVEK G+ADK+SH+STGGGASLELLEGKVLPGVAAL+E+
Sbjct:   56 RGVVCMAKKSVGDLKEADLKGKRVFVRADLNVPLDGDLKITDDTRIRAAVPTIKYLISNGAKVILSSHLGRPKGVTDKYRLTPLVPRLSELLGIKASLFSQVEKADDSIGPEVEKKVAALPDGGVLLLENVRFYPEEEKNVPEHAQKLAALADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCNILLLGGGMIFTFFKAQGLSVGSSLVEEDKIDLAKSLMKTAKDKGVSLLLPTDVVVADKFAADANSKIVPSTAIPDGWMGLDIGPDSVKTFNEALDTTKTVIWNGPMGVFEFDKFAVGTEAVAKKLAELSGKGVTTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGVAALDEA 466          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: PNH06673.1 (Phosphoglycerate kinase, chloroplastic [Tetrabaena socialis])

HSP 1 Score: 571.2 bits (1471), Expect = 2.800e-159
Identity = 306/441 (69.39%), Postives = 353/441 (80.05%), Query Frame = 0
Query:   17 AFVAPAMFKAASAGS--LTTATSAVTAAPVCPSNRQGVVT-MAKKSVSSLSDAELKGKRVFVRCDLNVPLD-GKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNE 453
            A VAP +   +S  S  L +  +   A  +  + R  VV   AKKSV  L  A+L+GKRVFVR DLNVPLD    ITDDTRIRA++PT++YL   GAKVLLTSHLGRPK G EDKY L PV  RL+ELLG  +    DCIG  V +AVAG+  G++ LLENVRFY EEEKN   FA+KLAANADLYVNDAFGTAHRAH STEGV+KFLKPAVAGFLLQKELDYLDGAVS PKRPF AIVGGSKVS+KITVIE+L+ KVDKI+IGGGMVFTF KARG +VG SLVE ++LDLA++LE +A  KGV+ +LPTDVVIADKFAPDAN++ V+   IP+GWMGLD GP+S K  QA LAD KT+IWNGPMGVFEF+KFA GT +IA T+A LT  GA TI+GGGDSVAAVE+AG+ADK+SH+STGGGASLELLEGKVLPGVAAL+E
Sbjct:   20 AAVAPRVAPLSSVNSQVLRSTFAPQIAIDIRRAGRSRVVVEAAKKSVGDLHKADLEGKRVFVRADLNVPLDKALHITDDTRIRAAIPTLKYLMENGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGTPIKKTDDCIGPEVEAAVAGMKNGELLLLENVRFYKEEEKNDAEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIESLLEKVDKIIIGGGMVFTFYKARGLSVGSSLVEMEQLDLAKKLEEMAKAKGVQLLLPTDVVIADKFAPDANTQTVSVETIPDGWMGLDIGPDSVKTFQAALADAKTVIWNGPMGVFEFEKFANGTVSIANTLASLTPNGAITIIGGGDSVAAVEQAGVADKMSHISTGGGASLELLEGKVLPGVAALDE 460          
The following BLAST results are available for this feature:
BLAST of NO06G04120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005535003.17.800e-16270.46phosphoglycerate kinase [Cyanidioschyzon merolae s... [more]
XP_024532689.12.300e-16172.84phosphoglycerate kinase 3, cytosolic [Selaginella ... [more]
XP_024533078.13.000e-16172.84phosphoglycerate kinase 3, cytosolic [Selaginella ... [more]
AAK40345.13.900e-16167.63phosphoglycerate kinase [Chondrus crispus][more]
XP_002951648.11.100e-16073.27phosphoglycerate kinase [Volvox carteri f. nagarie... [more]
KXZ41979.11.100e-16069.46pgk1 [Gonium pectorale][more]
CBN75623.11.300e-15967.87phosphoglycerate kinase [Ectocarpus siliculosus][more]
KVI02340.11.300e-15971.01Phosphoglycerate kinase [Cynara cardunculus var. s... [more]
EFJ26731.11.600e-15971.53hypothetical protein SELMODRAFT_267533 [Selaginell... [more]
PNH06673.12.800e-15969.39Phosphoglycerate kinase, chloroplastic [Tetrabaena... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000059NSK000059Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04120.1NO06G04120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|531032gene_6744Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100410g3gene4120Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04120.1NO06G04120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04120 ID=NO06G04120|Name=NO06G04120|organism=Nannochloropsis oceanica|type=gene|length=3698bp
ATTTTTAAATTCCTTTTCCAATGTTATTTAAACTTCACACCGTACAGATA
TCCGTTACTTCTTCAAAAGCGTCCCTTCTTGGCCCGAGCCCGCTCGATGA
CCGACTCGGCGACGGAGGCAGTGCTGAGGGTAGTGGTCGTTGGTGCCAAG
CTCTGGGCGCTCACACTCCCCTTCTTCCTCCCTCGCCACGACGACAAGGA
TAAAATCGAGCACGTCTCGGAATTTCCTTGTCGATGCCTGCCTCTATAAA
CACTGCCCTTTGGCCTGTAGTCTCGTCCTCGTCCGCTGGTGCTGGTGCTA
GTGCTGATGGTGCTAGTATTGCTGATGCTGGTGATGGCTCCACCTGGAAG
CTTGCCCAGCGTGAGCGCCGAAAGGCGCGACACATGCGAACCCACTTCTT
CATGTTCCGCTTTCCTAACCTCCATTTCCTGCTGCTGCGCCCTCCCTCCC
TCCACATACTTCGGACAGACCTCGGCAAAGGCCGTAAACCCGCCCGTCAA
CACGAATACGTTCTCCCATCCCCTTTCCACAAGCTGCGTGGCCATCGACG
CCGCAAGTCCTGCACGCTCATCGTCATCGTACAAAATAACCAATGTCCTT
TCCAGATTCTTGTAGCGGCGCAGCTCTGGAAAGTACTTGTCCTGGTGCAA
ATGCGCGTGGGGAAACGGACGGGTGTGGGTAATGACCCCAAGAGTGGGTG
TGCTCTCGCCCTCGTCGCGGACATCGAGCAACAAAAAAGGCTTCTCATAC
ACAGCATCATCCAGGCTCCCGTGCGTCACTACCAGTGGGCCGCAGCCCTC
TGCCTCCTCCAGTGCGTCTTGTGTTCTCATTTCATCGTCGTATTCAAGCA
GTAGAGCTCGGAGCTGTCCGGGATTGACCCGACAAAACGTCTCTTGCCGT
CGACGCACATACTGCGCGAAAGTCACCACCTTGACCTTGTTTATTGTTGG
GCCCGAATTAATTTTGCTGCGCACGTGATGGTATTGCCGTTGGGTGCGAG
GCGGCAAAGGCGGCAAAGGCAGTGGTCTCTCGCTGATGGAGGAAGAGGTG
GAAGAGGAGGACAAGGCGCGGCGACTCTCGGTCAACCGGGCACGATGCAT
GATGTTGATGGACTGTATTGAGAATGACTGAAGTAATCGTGCCTTGGGTC
AGTTGATGGAAACCACGGCTTGTGAGGTAAGGTGAAGACGACTTCCCCAA
TATTGACGGCGGGCGCAGCACATGAAAATTGCGGTAAACATGGCCCAAAT
TGTGCCGGGCCATGGTGCGAGGTAGTGAGTGGTCTCTATGAGCCAAGCTG
CAGTCCTCCCTGCTGAAGGCGGCCACAATAAATGCGACTCACACACTTTC
CACGCCAAAACAAGCACTTTTGTTGAATAAGGCATGGGCCCGCGGATGCA
CATTAAAAGCCCAAAATGTGCCAGCGAAGAAAGTATCCATCCAATTTCTT
TTGGGGGTGCGTTGCCTCTGCGTTGCAGCACTACCGTGACCTCTCTCGCC
ACCCTTCACCTTCCCGTTTTGCCACGATTCTCGGCATCGAGCGATCTTGG
TCTTGTCATCTGTGTTTTGAACACTTTGTGCCTGTGCTTGGCTTCAGCTC
TCGGTTTGGGGATCACACCCATTTCCATCCACATTGAACTGCCGAGCCAA
CATGATTCGTAGCCTCCTCTCCCCCTGTCCACTCGCGAGCGCAAGCACTG
ATCTAACTCGCCCAGCGGGAGTGCCTGCGTGCGCGTTTCTAGATCCTCCA
TTTCCTTTGCACACAGCACATGACCATCACTCCCCAACCTTGTCGCCATC
ATATTCCAACAGAAGATGAAGTTCACCGGCCTCGTCACGCTCCTGAGCGT
CGCCTCTGCGCAAGgtaagccaaaggagggatagaaaggaggggagaccg
tactgaattttggatctgagaacaacagcaagaagaaaaaccaagccaaa
aagcaagcctcttacattgcctcacaactcccaactccccacacaccaac
cacacccacagCCTTTGTGGCCCCCGCCATGTTCAAGGCCGCCTCCGCGG
GCTCTCTGACCACGGCCACCTCCGCCGTGACGGCTGCCCCGGTCTGTCCT
TCCAACCGACAAGGCGTTGTGACCATGGCTAAGAAGAGCGTGTCCTCCCT
GAGCGACGCGGAGCTCAAGGGCAAGCGTGTGTTTGTGCGTTGCGACTTGA
ACGTGCCCCTTGACGGAAAGAAGATCACGGACGACACCCGTATCCGTGCG
TCGGTGCCCACCATCGAGTACCTGGCCTCCAAGGGCGCCAAGGTCCTCCT
CACCTCCCACTTGGGCCGACCCAAGGGCAAGGAGGACAAGTACTCCCTGG
CCCCCGTGGCTGATCGCCTGACCGAGCTCTTGGGCAAGAAGGTGACTTTC
GTCCCGGACTGCATCGGCGAGACTGTCACCAGCGCCGTCGCTGGCCTTGC
GGAAGGAGATGTTGCTCTCCTGGAGAACGTCCGCTTCTACCCCGAGGAGG
AGAAGAATGTGCCTGCCTTCGCTGAGAAGCTGGCTGCCAACGCTGACTTG
TACGTGAACGATGCCTTCGGCACGGCCCACCGCGCTCACGGCTCCACTGA
GGGTGTCTCCAAGTTCCTCAAGCCCGCTGTCGCCGGTTTCCTTCTCCAGA
AGGAGCTCGACTACCTTGACGGCGCCGTCTCCCAGCCCAAGCGCCCCTTC
GCCGCCATCGTTGGCGGGTCTAAGgtatgatctcgagggtgggaaagagg
gaggatcgatggtggtgccccgtgggggcgttgtctgtcggtcagccctt
accctcactctcacgcttcctccctctctcgtttactctcttgcccgttt
cttttcctttcatccagGTCTCCACCAAGATCACTGTGATTGAGACGCTC
ATCAACAAGGTCGACAAGATCGTCATCGGCGGCGGCATGGTCTTTACCTT
CCTGAAGGCCCGTGGACACAACgtgagtccccctcatgccctccctctct
ccctccctctctcacttcctcctttcttccctatcaaacttttttgaccc
tccatacacctacctgcccactaccacacccacaatctttgccttgaatc
cttcccccctcctccttccccccctcctccttcccccttccccccctcct
cctcagGTCGGCGGCTCCCTCGTCGAGGAGGACAAGCTCGACTTGGCCCG
TGAGTTGGAGGCCCTCGCCGCGAAGAAAGGCGTCAAATTCATCCTGCCCA
CGGACGTGGTCATCGCCGACAAATTTGCTCCGGACGCCAACAGCAAGGTG
GTGGCTGCCACTGCCATCCCGGAGGGGTGGATGGGCCTTGACAACGGCCC
CGAGTCGACCAAGATGATCCAGGCGGAGCTCGCGGACTGCAAGACCATCA
TCTGGAACGGTCCCATGGGCGTGTTTGAGTTCGACAAATTCGCCGCAGGC
ACCAGCGCGATCGCCCAGACTATGGCGGAGCTCACTGCCAAGGGCGCTAC
CACCATCGTCGGCGGCGGTGACTCGGTGGCTGCTGTCGAAAAGGCCGGCC
TGGCCGACAAGCTCTCCCACGTCTCCACCGGCGGGGGTGCTTCCTTGGAG
CTGCTCGAGGGCAAGGTGCTCCCCGGTGTGGCGGCCCTCAACGAGTCTTA
AGTCTCTTTCTAGATGGAGGAGCGAGGGAGGGAGGGAGGGAGGGAGGG
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protein sequence of NO06G04120.1

>NO06G04120.1-protein ID=NO06G04120.1-protein|Name=NO06G04120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=454bp
MKFTGLVTLLSVASAQAFVAPAMFKAASAGSLTTATSAVTAAPVCPSNRQ
GVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPT
IEYLASKGAKVLLTSHLGRPKGKEDKYSLAPVADRLTELLGKKVTFVPDC
IGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVND
AFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIV
GGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKL
DLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGL
DNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTA
KGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAAL
NES*
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Synonyms
Publications