NO06G04120, NO06G04120 (gene) Nannochloropsis oceanica

Overview
NameNO06G04120
Unique NameNO06G04120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3698
Alignment locationchr6:1153826..1157523 -

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphoglycerate kinase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1153826..1157523 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004618phosphoglycerate kinase activity
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR036043Phosphoglycerate_kinase_sf
IPR001576Phosphoglycerate_kinase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO06G04120 vs. NCBI_GenBank
Match: EWM26407.1 (phosphoglycerate kinase [Nannochloropsis gaditana])

HSP 1 Score: 787.7 bits (2033), Expect = 1.900e-224
Identity = 413/454 (90.97%), Postives = 432/454 (95.15%), Query Frame = 0
Query:    1 MKFTGLVTLLSVASAQAFVAPAMFKAASAGSLTTATSAVTAAPVCPS-NRQGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPKGKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            MK TGLVTLLSVASAQAFVAP+ FKA SAG++T   SA  A PVCPS +R+GV+TMAKKSV SL+DA+LKGKRVFVRCDLNVPLDGK ITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPKGKEDK+SL+PVADRLTELLGKKV FV DCIGE V++AVAGL EGDVALLENVRFYPEEEKNV  FAEKLAANADLYVNDAFGTAHRAHGSTEGV+KFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDK+VIGGGMVFTFLKARGHNVGGSLVEEDKLDLAR LE LA +KGVKFILPTDVVIADKFAPDANSKVVA+T IPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIA+T+AELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNE+
Sbjct:   35 MKITGLVTLLSVASAQAFVAPSFFKAPSAGAMT--GSAAVAEPVCPSTSRRGVMTMAKKSVGSLADADLKGKRVFVRCDLNVPLDGKTITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPKGKEDKFSLSPVADRLTELLGKKVAFVEDCIGEAVSTAVAGLKEGDVALLENVRFYPEEEKNVAEFAEKLAANADLYVNDAFGTAHRAHGSTEGVAKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKLVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARSLEELAKQKGVKFILPTDVVIADKFAPDANSKVVASTEIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAETLAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNEA 486          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: CEM26305.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 624.0 bits (1608), Expect = 3.600e-175
Identity = 322/435 (74.02%), Postives = 373/435 (85.75%), Query Frame = 0
Query:   28 SAGSLTTATSAVTAAP---VCPSNRQGV-----VTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            +  ++T+ T+ V AA    + P + +G+     +TMAKKSVS+L++ +L GKRV VRCDLNVPLDGK ITDDTRIRAS+ TI+YLA  GAKVLLTSHLGRPK G EDK+SL PVA RL+ELLGK V   PDCIG+ V   V  +  GDV LLENVRFY EEEKN P FA+KLAANADL+VNDAFGTAHRAHGSTEGV+KFL P+VAGFLLQKELDYL+GAVS PKRPFAAIVGGSKVS+KITVIETL+ KVDK++IGGGMVFTFLKARG +VG SLVEEDK+DLA+++E +A+ KGV+ ILPTDV+IADKFA DA SKVV    IP+GWMGLDNGPESTKMIQ +LA+CKTI+WNGPMGVFEFDKFAAGT  +A+T+AELT KGATTI+GGGDSVAAVEKAGLA+K+SH+STGGGASLELLEGKVLPGVAAL+E+
Sbjct:   10 AVSAITSGTAFVPAARQGLLSPRSFRGISRRAPMTMAKKSVSTLTETDLAGKRVLVRCDLNVPLDGKTITDDTRIRASIQTIKYLADNGAKVLLTSHLGRPKNGPEDKFSLGPVAGRLSELLGKDVPIAPDCIGDKVEEMVGKMNNGDVMLLENVRFYAEEEKNDPDFAKKLAANADLFVNDAFGTAHRAHGSTEGVTKFLAPSVAGFLLQKELDYLEGAVSDPKRPFAAIVGGSKVSSKITVIETLLEKVDKLIIGGGMVFTFLKARGMSVGASLVEEDKMDLAKKIEEIASSKGVELILPTDVIIADKFAADAESKVVPVGEIPDGWMGLDNGPESTKMIQDKLAECKTIVWNGPMGVFEFDKFAAGTIDVAKTLAELTEKGATTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDEA 444          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: AAW79325.1 (phosphoglycerate kinase [Isochrysis galbana])

HSP 1 Score: 618.2 bits (1593), Expect = 2.000e-173
Identity = 318/438 (72.60%), Postives = 367/438 (83.79%), Query Frame = 0
Query:   17 AFVAPAMFKAASAGSLTTATSAVTAAPVCPSNRQGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            A +A A+F  A A         + AAP+  ++R   + MAKKSV  L+ A+L+GKRV VRCDLNVPLDGK ITDDTRIRAS+PTI+YL   GAKVLL+SHLGRPK G EDK+SL PVA RL+ELLGK+VT  PDCIG+ V   V  +A GDV LLEN RFY EEEKN P FAEKLAANAD++VNDAFGTAHRAHGSTEGV+KFL P+VAGFLLQKELDYLDGAVS PKRPFAAIVGGSKVS+KI VIE+L+ KVDKIVIGGGMVFTFLKARG   G SLVEED+L+LA++LE +A +KG+ FILPTDV++ADKFA DA +++V+  AIPEGWMGLDNGPESTKMIQ +L++CKTIIWNGPMGVFEF+ FA GT  +A T+AELT KG TTI+GGGDSVAAVEKAGLA+K+SH+STGGGASLELLEGKVLPGVAAL E+
Sbjct:    6 ATLALALFGGAEA-------LRIGAAPMRSTSRTCTIEMAKKSVGDLTKADLEGKRVLVRCDLNVPLDGKTITDDTRIRASIPTIKYLIDNGAKVLLSSHLGRPKGGPEDKFSLGPVAPRLSELLGKEVTMAPDCIGDAVADCVTKMANGDVLLLENTRFYKEEEKNDPEFAEKLAANADMFVNDAFGTAHRAHGSTEGVTKFLSPSVAGFLLQKELDYLDGAVSDPKRPFAAIVGGSKVSSKIGVIESLMEKVDKIVIGGGMVFTFLKARGLETGSSLVEEDQLELAKKLEVIAKEKGIDFILPTDVIVADKFAADAATQIVSVDAIPEGWMGLDNGPESTKMIQQKLSECKTIIWNGPMGVFEFEAFAKGTFDVADTLAELTGKGCTTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALQEA 436          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: OUX73086.1 (phosphoglycerate kinase [Alphaproteobacteria bacterium TMED89])

HSP 1 Score: 612.5 bits (1578), Expect = 1.100e-171
Identity = 305/400 (76.25%), Postives = 350/400 (87.50%), Query Frame = 0
Query:   55 MAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            MAKKSV  L++A+LKGK+V VRCDLNVPLDGK ITDDTRIRASVPT++YL  KGAKVLL+SHLGRPK G EDK+SL PVA RL+ELLG  V   PDCIG+ VT+ V  ++EG V LLEN RFY EEEKNVP FAEKLAANAD++VNDAFGTAHRAHGSTEGV+K+L P+VAGFLLQKELDYLDGAVS PKRPFAAIVGGSKVS+KI VIE+L+ KVDKIVIGGGMVFTFLKARG   G SLVEED+L+LA++LE +A +KG+ FILP+DV++ADKFA DA ++ V+  AIP+GWMGLDNGPESTKMIQA+L +CKT+IWNGPMGVFEF+ FA GT  IA T+AELT  G TTI+GGGDSVAAVEKAGLA+K+SH+STGGGASLELLEGKVLPGVAAL E+
Sbjct:    1 MAKKSVGDLTEADLKGKKVLVRCDLNVPLDGKTITDDTRIRASVPTVKYLMEKGAKVLLSSHLGRPKEGPEDKFSLGPVAPRLSELLGTTVEMAPDCIGDAVTAKVDAMSEGSVLLLENTRFYKEEEKNVPEFAEKLAANADMFVNDAFGTAHRAHGSTEGVTKYLSPSVAGFLLQKELDYLDGAVSDPKRPFAAIVGGSKVSSKIGVIESLMEKVDKIVIGGGMVFTFLKARGLETGSSLVEEDQLELAKKLEVIAKEKGIDFILPSDVIVADKFAADAATQTVSVEAIPDGWMGLDNGPESTKMIQAKLGECKTVIWNGPMGVFEFEAFAKGTFDIADTLAELTGSGCTTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALQEA 400          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: XP_023274767.1 (phosphoglycerate kinase, cytosolic-like [Seriola lalandi dorsalis])

HSP 1 Score: 605.9 bits (1561), Expect = 1.000e-169
Identity = 314/438 (71.69%), Postives = 362/438 (82.65%), Query Frame = 0
Query:   17 AFVAPAMFKAASAGSLTTATSAVTAAPVCPSNRQGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            A +A A+F  A A         + AAP+   +R   + MAKKSV  LS+A+LKGK+V VRCDLNVPLDGK ITDDTRIRASVPT++YL  KGAKVLL+SHLGRPK G EDK+SL PVA RL+ELLGK V   PDCIG+ V   V  + +GDV LLEN RFY EEEKNVP FAEKLAANADL+VNDAFGTAHRAHGSTEGV+K+L P+VAGFLLQKELDYLDGAVS+PKRPFAAIVGGSKVS+KI VIE+L+ KVDKIVIGGGMVFTFLKARG   G SLVEED+L+LA +LE +A +KG+ FILP+DV++ADKFA DA ++ V+  +IPEGWMGLDNGP +T  IQ EL+DCKT+IWNGPMGVFEF+ FA GT  IA T+AELT  G TTI+GGGDSVAAVEKAGLA+K+SH+STGGGASLELLEGKVLPGVAAL E+
Sbjct:    6 ATLALALFGGAEA-------LTIGAAPMRSISRSCNIEMAKKSVGDLSEADLKGKKVLVRCDLNVPLDGKTITDDTRIRASVPTVKYLVEKGAKVLLSSHLGRPKSGPEDKFSLGPVAPRLSELLGKDVVMAPDCIGDGVKECVDKMGDGDVLLLENTRFYKEEEKNVPEFAEKLAANADLFVNDAFGTAHRAHGSTEGVTKYLSPSVAGFLLQKELDYLDGAVSEPKRPFAAIVGGSKVSSKIGVIESLMEKVDKIVIGGGMVFTFLKARGLETGSSLVEEDQLELATKLEKIAEEKGITFILPSDVIVADKFAADAATQTVSVDSIPEGWMGLDNGPVATAEIQKELSDCKTVIWNGPMGVFEFEAFAKGTFDIADTLAELTGTGCTTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALQEA 436          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: KOO26488.1 (phosphoglycerate kinase, partial [Chrysochromulina sp. CCMP291])

HSP 1 Score: 597.4 bits (1539), Expect = 3.600e-167
Identity = 309/428 (72.20%), Postives = 355/428 (82.94%), Query Frame = 0
Query:   27 ASAGSLTTATSAVTAAPVCPSNRQGVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            A A S T  T+ V ++ V   +R  VV M KKSV +L++A+LKGKRV VRCDLNVPLDGK ITDDTRIRASVPT++YL  KGAKVLLTSHLGRPK G EDK+SL PVA R+ ELLGK V   PDCIG+ V   V  +  GDV LLEN RFY EEEKN P FAEKLA+NADL+VNDAFGTAHRAH STEGV+K+LK +VAGFLLQKELDYLDGAVS+PKRPFAAIVGGSKVS+KI VIE+L+ KVDKIVIGGGMVFTFLKARG   G SLVE D+L+LA +LE +A +KG+ FILP+DVVIADKFA DA +++V   AIPEGWMGLDNGP +TK I  +L+DCKT+IWNGPMGVFEFD F+ GT  +A+ +A+LT  G TTI+GGGDSVAAVEKAGLADK+SH+STGGGASLELLEGKVLPGVAAL E+
Sbjct:   77 AGAASFTLPTAHVGSSQV---SRTSVVEMKKKSVGALTEADLKGKRVLVRCDLNVPLDGKTITDDTRIRASVPTVKYLVEKGAKVLLTSHLGRPKDGPEDKFSLGPVAPRMAELLGKPVRMAPDCIGDAVKKCVDEMQNGDVLLLENSRFYKEEEKNKPEFAEKLASNADLFVNDAFGTAHRAHASTEGVTKYLKTSVAGFLLQKELDYLDGAVSEPKRPFAAIVGGSKVSSKIGVIESLMTKVDKIVIGGGMVFTFLKARGLETGASLVEMDQLELATKLEKMAKEKGIDFILPSDVVIADKFAADAATQIVKVNAIPEGWMGLDNGPMATKEIIEKLSDCKTVIWNGPMGVFEFDAFSKGTYDVAEALAKLTGTGCTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKVLPGVAALQEA 501          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: OSX72416.1 (hypothetical protein BU14_0438s0011 [Porphyra umbilicalis])

HSP 1 Score: 587.8 bits (1514), Expect = 2.900e-164
Identity = 295/398 (74.12%), Postives = 346/398 (86.93%), Query Frame = 0
Query:   56 AKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNE 453
            AKKS+  L+ A+L GKRV VRCDLNVPLDGK ITDDTRIRAS+PTIEYL + GAKVLL+SHLGRPK G EDK+SLAPVA RL+ELL K V   PDCIG+ V   V+G+  GDV LLENVRFY EE  N   FA+KLAANAD++VNDAFGTAHRAHGST GV++FL+P+VAG LL+KEL+YL GAVS PKRPFAAIVGGSKVS+KI VIE++++KVDK++I GGMVFTFLKARG + G SLVE+DK+DLA+ELEA+AAKKGVK ILP DVV ADKFAPDAN+++V+  AIPEG MGLD GP+ST++I +ELA+CKT++WNGP GVFEFD FA GT AIA T+AE+TA GATTI+GGGDSVAAVEKAGLA+K+SH+STGGGASLELLEGKVLPGVAAL++
Sbjct:   58 AKKSIKDLTAADLAGKRVLVRCDLNVPLDGKTITDDTRIRASIPTIEYLTAAGAKVLLSSHLGRPKSGPEDKFSLAPVAARLSELLKKDVKMAPDCIGDGVAEIVSGMKNGDVTLLENVRFYKEETANDTEFAKKLAANADMFVNDAFGTAHRAHGSTAGVTEFLRPSVAGLLLEKELEYLAGAVSNPKRPFAAIVGGSKVSSKIGVIESMLDKVDKLIIVGGMVFTFLKARGLSTGSSLVEDDKIDLAKELEAIAAKKGVKIILPVDVVAADKFAPDANTQLVSVEAIPEGTMGLDQGPKSTELINSELAECKTVLWNGPAGVFEFDAFAKGTYAIANTLAEVTANGATTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDD 455          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: XP_005822051.1 (hypothetical protein GUITHDRAFT_80135 [Guillardia theta CCMP2712] >EKX35071.1 hypothetical protein GUITHDRAFT_80135 [Guillardia theta CCMP2712])

HSP 1 Score: 583.2 bits (1502), Expect = 7.100e-163
Identity = 293/398 (73.62%), Postives = 339/398 (85.18%), Query Frame = 0
Query:   57 KKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNES 454
            KKSV  L  A+LKGK+V +RCDLNVPLDGKKITDDTRIRASV T++YL   GA+V ++SHLGRPK G EDK+SLAP A RL ELLGK V    DCIG+ VT  V  L +G++ LLEN RFY +EEKN   F++KLAA  D+YVNDAFGTAHRAH ST GV++F+  +VAGFLLQKELDYLDGAV+ PKRPFAAIVGGSKVS+KI VIE+L+ K DK+VIGGGMVFTFLKARG NVG SLVEEDKL+LA+ LE  AA+KGVKFILPTDVV+ADKFA DAN+KV + + IP+GWMGLDNGPESTKMIQ EL+DC TIIWNGPMGVFEF+KFA GT+ +A+T+AE T+KGA TI+GGGDSVAAVEKAGLADK+SH+STGGGASLELLEG VLPGVAAL ++
Sbjct:    6 KKSVGDLKGADLKGKKVLIRCDLNVPLDGKKITDDTRIRASVQTLKYLLDNGARVAVSSHLGRPKDGPEDKFSLAPCATRLGELLGKDVKMAKDCIGDDVTKLVDSLKDGEICLLENTRFYKQEEKNDKEFSKKLAAPFDIYVNDAFGTAHRAHSSTAGVTEFIPTSVAGFLLQKELDYLDGAVANPKRPFAAIVGGSKVSSKIGVIESLLGKCDKLVIGGGMVFTFLKARGLNVGSSLVEEDKLELAKSLEKKAAEKGVKFILPTDVVLADKFAADANTKVASVSDIPDGWMGLDNGPESTKMIQKELSDCNTIIWNGPMGVFEFEKFAKGTNDVAKTLAECTSKGAITIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGLVLPGVAALTDA 403          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: XP_005821497.1 (phosphoglycerate kinase, plastid-targeted [Guillardia theta CCMP2712] >EKX34517.1 phosphoglycerate kinase, plastid-targeted [Guillardia theta CCMP2712])

HSP 1 Score: 582.8 bits (1501), Expect = 9.300e-163
Identity = 312/461 (67.68%), Postives = 367/461 (79.61%), Query Frame = 0
Query:    7 VTLLSVASAQAFVAPAMFKAASAGSLTTATSAVTAAP------------VCPSNRQ-GVVTMA--KKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALN 452
            + L SVA+A A+V+  +  A    S   A S+ T  P            V  + R    +TM+  KKSV  L+ AELKGK+V +RCDLNVPLDGKKITDDTRIRASVPTI+YL   GA+V ++SHLGRPK G EDK+SL+P A RL+ELLGK V    DCIG  V S V GL +G+  +LENVRFY EEEKN  +F+EKLAA  D+YVNDAFGTAHRAH ST GV++FL P+V+GFLLQKELDYL+GAV+ PKRPFAAIVGGSKVS+KI VIE+L+ K DK++IGGGMVFTFLKARG NVG SLVEEDKL+LAR LEA A  KGVKFILP+DVV+ADKF  +AN+KV  A+ IP+GWMGLDNGPE+TK IQA L+DCKTIIWNGPMGVFE DKFA GT+A+AQT+AE T KGA TI+GGGDSVAAVEKAGLA+++SH+STGGGASLELLEG+VLPGVAAL+
Sbjct:    5 LVLASVAAASAYVSSPVGLAGGRTSNKPAISSSTFTPRLRSAAPIHGVEVARAGRMASSITMSAKKKSVKDLTPAELKGKKVLIRCDLNVPLDGKKITDDTRIRASVPTIKYLLDNGARVAISSHLGRPKNGPEDKFSLSPCATRLSELLGKDVKMAKDCIGPEVKSLVDGLKDGEACVLENVRFYKEEEKNEKSFSEKLAAPFDMYVNDAFGTAHRAHSSTAGVTEFLSPSVSGFLLQKELDYLEGAVANPKRPFAAIVGGSKVSSKIGVIESLLEKCDKLIIGGGMVFTFLKARGLNVGSSLVEEDKLELARTLEAKAKAKGVKFILPSDVVLADKFDANANTKVAKASDIPDGWMGLDNGPEATKEIQAALSDCKTIIWNGPMGVFEMDKFAVGTNAVAQTLAECTKKGAITIIGGGDSVAAVEKAGLAEQMSHISTGGGASLELLEGQVLPGVAALD 465          
BLAST of NO06G04120 vs. NCBI_GenBank
Match: BAG09537.1 (phosphoglycerate kinase [Pyropia yezoensis])

HSP 1 Score: 580.9 bits (1496), Expect = 3.500e-162
Identity = 306/442 (69.23%), Postives = 362/442 (81.90%), Query Frame = 0
Query:   19 VAPAMFKAASAGSLTTATS---AVTAAPVCPSNRQGVV----TMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPTIEYLASKGAKVLLTSHLGRPK-GKEDKYSLAPVADRLTELLGKKVTFVPDCIGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVNDAFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIVGGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKLDLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGLDNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTAKGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAALNE 453
            VA A    AS+ S+  A++    V AA    ++  GVV      AKKS+  L+ A+L GKRV VRCDLNVPLDGK ITDDTRIRAS+PTIEYL + GAKVLL+SHLGRPK G EDK+SLAPVA RL+ELL K V   PDCIG+ V   V+G++ GDV LLENVRFY EE  N   FA+KLAANAD++VNDAFGTAHRAHGST GV++FL+P+VAG LL+KEL YL GAVS PKRPFAAIVGGSKVS+KI VIE++++KVDK+VI GGMVFTFLKARG + G SLVE+DK++LA+ELE +AAKKGVK ILP DVV ADKFAPDA +++V+  AIP+  MGLD GP+ST++I AELADCKT++WNGP GVFEFD FA GT AIA T+AE+TA GATTI+GGGDSVAAVEKAGLA+K+SH+STGGGASLELLEGKVLPGVAAL++
Sbjct:   15 VAKATTSVASSSSVFVASNRRVQVPAAGAASASPSGVVMQATATAKKSIKDLTAADLAGKRVLVRCDLNVPLDGKTITDDTRIRASIPTIEYLTAAGAKVLLSSHLGRPKSGPEDKFSLAPVATRLSELLKKDVKMAPDCIGDGVAEIVSGMSNGDVTLLENVRFYKEETANDTEFAKKLAANADMFVNDAFGTAHRAHGSTAGVTEFLRPSVAGLLLEKELAYLAGAVSNPKRPFAAIVGGSKVSSKIGVIESMLDKVDKLVIVGGMVFTFLKARGLSTGSSLVEDDKIELAKELEEIAAKKGVKIILPVDVVAADKFAPDAKTQLVSVDAIPDDTMGLDQGPKSTELINAELADCKTVLWNGPAGVFEFDAFATGTYAIANTLAEVTANGATTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDD 456          
The following BLAST results are available for this feature:
BLAST of NO06G04120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26407.11.900e-22490.97phosphoglycerate kinase [Nannochloropsis gaditana][more]
CEM26305.13.600e-17574.02unnamed protein product [Vitrella brassicaformis C... [more]
AAW79325.12.000e-17372.60phosphoglycerate kinase [Isochrysis galbana][more]
OUX73086.11.100e-17176.25phosphoglycerate kinase [Alphaproteobacteria bacte... [more]
XP_023274767.11.000e-16971.69phosphoglycerate kinase, cytosolic-like [Seriola l... [more]
KOO26488.13.600e-16772.20phosphoglycerate kinase, partial [Chrysochromulina... [more]
OSX72416.12.900e-16474.12hypothetical protein BU14_0438s0011 [Porphyra umbi... [more]
XP_005822051.17.100e-16373.62hypothetical protein GUITHDRAFT_80135 [Guillardia ... [more]
XP_005821497.19.300e-16367.68phosphoglycerate kinase, plastid-targeted [Guillar... [more]
BAG09537.13.500e-16269.23phosphoglycerate kinase [Pyropia yezoensis][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000059NSK000059Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04120.1NO06G04120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|531032gene_6744Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100410g3gene4120Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04120.1NO06G04120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04120 ID=NO06G04120|Name=NO06G04120|organism=Nannochloropsis oceanica|type=gene|length=3698bp
ATTTTTAAATTCCTTTTCCAATGTTATTTAAACTTCACACCGTACAGATA
TCCGTTACTTCTTCAAAAGCGTCCCTTCTTGGCCCGAGCCCGCTCGATGA
CCGACTCGGCGACGGAGGCAGTGCTGAGGGTAGTGGTCGTTGGTGCCAAG
CTCTGGGCGCTCACACTCCCCTTCTTCCTCCCTCGCCACGACGACAAGGA
TAAAATCGAGCACGTCTCGGAATTTCCTTGTCGATGCCTGCCTCTATAAA
CACTGCCCTTTGGCCTGTAGTCTCGTCCTCGTCCGCTGGTGCTGGTGCTA
GTGCTGATGGTGCTAGTATTGCTGATGCTGGTGATGGCTCCACCTGGAAG
CTTGCCCAGCGTGAGCGCCGAAAGGCGCGACACATGCGAACCCACTTCTT
CATGTTCCGCTTTCCTAACCTCCATTTCCTGCTGCTGCGCCCTCCCTCCC
TCCACATACTTCGGACAGACCTCGGCAAAGGCCGTAAACCCGCCCGTCAA
CACGAATACGTTCTCCCATCCCCTTTCCACAAGCTGCGTGGCCATCGACG
CCGCAAGTCCTGCACGCTCATCGTCATCGTACAAAATAACCAATGTCCTT
TCCAGATTCTTGTAGCGGCGCAGCTCTGGAAAGTACTTGTCCTGGTGCAA
ATGCGCGTGGGGAAACGGACGGGTGTGGGTAATGACCCCAAGAGTGGGTG
TGCTCTCGCCCTCGTCGCGGACATCGAGCAACAAAAAAGGCTTCTCATAC
ACAGCATCATCCAGGCTCCCGTGCGTCACTACCAGTGGGCCGCAGCCCTC
TGCCTCCTCCAGTGCGTCTTGTGTTCTCATTTCATCGTCGTATTCAAGCA
GTAGAGCTCGGAGCTGTCCGGGATTGACCCGACAAAACGTCTCTTGCCGT
CGACGCACATACTGCGCGAAAGTCACCACCTTGACCTTGTTTATTGTTGG
GCCCGAATTAATTTTGCTGCGCACGTGATGGTATTGCCGTTGGGTGCGAG
GCGGCAAAGGCGGCAAAGGCAGTGGTCTCTCGCTGATGGAGGAAGAGGTG
GAAGAGGAGGACAAGGCGCGGCGACTCTCGGTCAACCGGGCACGATGCAT
GATGTTGATGGACTGTATTGAGAATGACTGAAGTAATCGTGCCTTGGGTC
AGTTGATGGAAACCACGGCTTGTGAGGTAAGGTGAAGACGACTTCCCCAA
TATTGACGGCGGGCGCAGCACATGAAAATTGCGGTAAACATGGCCCAAAT
TGTGCCGGGCCATGGTGCGAGGTAGTGAGTGGTCTCTATGAGCCAAGCTG
CAGTCCTCCCTGCTGAAGGCGGCCACAATAAATGCGACTCACACACTTTC
CACGCCAAAACAAGCACTTTTGTTGAATAAGGCATGGGCCCGCGGATGCA
CATTAAAAGCCCAAAATGTGCCAGCGAAGAAAGTATCCATCCAATTTCTT
TTGGGGGTGCGTTGCCTCTGCGTTGCAGCACTACCGTGACCTCTCTCGCC
ACCCTTCACCTTCCCGTTTTGCCACGATTCTCGGCATCGAGCGATCTTGG
TCTTGTCATCTGTGTTTTGAACACTTTGTGCCTGTGCTTGGCTTCAGCTC
TCGGTTTGGGGATCACACCCATTTCCATCCACATTGAACTGCCGAGCCAA
CATGATTCGTAGCCTCCTCTCCCCCTGTCCACTCGCGAGCGCAAGCACTG
ATCTAACTCGCCCAGCGGGAGTGCCTGCGTGCGCGTTTCTAGATCCTCCA
TTTCCTTTGCACACAGCACATGACCATCACTCCCCAACCTTGTCGCCATC
ATATTCCAACAGAAGATGAAGTTCACCGGCCTCGTCACGCTCCTGAGCGT
CGCCTCTGCGCAAGgtaagccaaaggagggatagaaaggaggggagaccg
tactgaattttggatctgagaacaacagcaagaagaaaaaccaagccaaa
aagcaagcctcttacattgcctcacaactcccaactccccacacaccaac
cacacccacagCCTTTGTGGCCCCCGCCATGTTCAAGGCCGCCTCCGCGG
GCTCTCTGACCACGGCCACCTCCGCCGTGACGGCTGCCCCGGTCTGTCCT
TCCAACCGACAAGGCGTTGTGACCATGGCTAAGAAGAGCGTGTCCTCCCT
GAGCGACGCGGAGCTCAAGGGCAAGCGTGTGTTTGTGCGTTGCGACTTGA
ACGTGCCCCTTGACGGAAAGAAGATCACGGACGACACCCGTATCCGTGCG
TCGGTGCCCACCATCGAGTACCTGGCCTCCAAGGGCGCCAAGGTCCTCCT
CACCTCCCACTTGGGCCGACCCAAGGGCAAGGAGGACAAGTACTCCCTGG
CCCCCGTGGCTGATCGCCTGACCGAGCTCTTGGGCAAGAAGGTGACTTTC
GTCCCGGACTGCATCGGCGAGACTGTCACCAGCGCCGTCGCTGGCCTTGC
GGAAGGAGATGTTGCTCTCCTGGAGAACGTCCGCTTCTACCCCGAGGAGG
AGAAGAATGTGCCTGCCTTCGCTGAGAAGCTGGCTGCCAACGCTGACTTG
TACGTGAACGATGCCTTCGGCACGGCCCACCGCGCTCACGGCTCCACTGA
GGGTGTCTCCAAGTTCCTCAAGCCCGCTGTCGCCGGTTTCCTTCTCCAGA
AGGAGCTCGACTACCTTGACGGCGCCGTCTCCCAGCCCAAGCGCCCCTTC
GCCGCCATCGTTGGCGGGTCTAAGgtatgatctcgagggtgggaaagagg
gaggatcgatggtggtgccccgtgggggcgttgtctgtcggtcagccctt
accctcactctcacgcttcctccctctctcgtttactctcttgcccgttt
cttttcctttcatccagGTCTCCACCAAGATCACTGTGATTGAGACGCTC
ATCAACAAGGTCGACAAGATCGTCATCGGCGGCGGCATGGTCTTTACCTT
CCTGAAGGCCCGTGGACACAACgtgagtccccctcatgccctccctctct
ccctccctctctcacttcctcctttcttccctatcaaacttttttgaccc
tccatacacctacctgcccactaccacacccacaatctttgccttgaatc
cttcccccctcctccttccccccctcctccttcccccttccccccctcct
cctcagGTCGGCGGCTCCCTCGTCGAGGAGGACAAGCTCGACTTGGCCCG
TGAGTTGGAGGCCCTCGCCGCGAAGAAAGGCGTCAAATTCATCCTGCCCA
CGGACGTGGTCATCGCCGACAAATTTGCTCCGGACGCCAACAGCAAGGTG
GTGGCTGCCACTGCCATCCCGGAGGGGTGGATGGGCCTTGACAACGGCCC
CGAGTCGACCAAGATGATCCAGGCGGAGCTCGCGGACTGCAAGACCATCA
TCTGGAACGGTCCCATGGGCGTGTTTGAGTTCGACAAATTCGCCGCAGGC
ACCAGCGCGATCGCCCAGACTATGGCGGAGCTCACTGCCAAGGGCGCTAC
CACCATCGTCGGCGGCGGTGACTCGGTGGCTGCTGTCGAAAAGGCCGGCC
TGGCCGACAAGCTCTCCCACGTCTCCACCGGCGGGGGTGCTTCCTTGGAG
CTGCTCGAGGGCAAGGTGCTCCCCGGTGTGGCGGCCCTCAACGAGTCTTA
AGTCTCTTTCTAGATGGAGGAGCGAGGGAGGGAGGGAGGGAGGGAGGG
back to top

protein sequence of NO06G04120.1

>NO06G04120.1-protein ID=NO06G04120.1-protein|Name=NO06G04120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=454bp
MKFTGLVTLLSVASAQAFVAPAMFKAASAGSLTTATSAVTAAPVCPSNRQ
GVVTMAKKSVSSLSDAELKGKRVFVRCDLNVPLDGKKITDDTRIRASVPT
IEYLASKGAKVLLTSHLGRPKGKEDKYSLAPVADRLTELLGKKVTFVPDC
IGETVTSAVAGLAEGDVALLENVRFYPEEEKNVPAFAEKLAANADLYVND
AFGTAHRAHGSTEGVSKFLKPAVAGFLLQKELDYLDGAVSQPKRPFAAIV
GGSKVSTKITVIETLINKVDKIVIGGGMVFTFLKARGHNVGGSLVEEDKL
DLARELEALAAKKGVKFILPTDVVIADKFAPDANSKVVAATAIPEGWMGL
DNGPESTKMIQAELADCKTIIWNGPMGVFEFDKFAAGTSAIAQTMAELTA
KGATTIVGGGDSVAAVEKAGLADKLSHVSTGGGASLELLEGKVLPGVAAL
NES*
back to top
Synonyms
Publications