NO06G04060, NO06G04060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G04060 vs. NCBI_GenBank
Match: XP_011395920.1 (hypothetical protein F751_0434 [Auxenochlorella protothecoides] >KFM23050.1 hypothetical protein F751_0434 [Auxenochlorella protothecoides]) HSP 1 Score: 74.7 bits (182), Expect = 8.600e-10 Identity = 85/355 (23.94%), Postives = 123/355 (34.65%), Query Frame = 0 Query: 13 LFLLAFLALLPTPSSSSAWDPHP----WPSTPPYVEGWYVRLTSLDTSDTLGVIFGASLLPLSPPSSLPPCYVAILHGDGKTNKTTVYEGNPPLESVE-------IRGHYGRNITKSPDWRTEPHFTWRARTPSHHNSDNLTADTEAIKQEIXXXXXXXXXXXXXXXXXXXXXXXTMTAVQEGPLLFLHITLPTARFLAQIEVSPWAY---DGSPRPHSWTDIIDEVPLHWYIHTLSSRLLYARLELHQAEGAREGGKVMESRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHASSSSLPSSVAFVLSYGQVSPGIFTHFAHFRDEELGIAWDFKPVNSVLVAEEVDGCEGRAR 354 L L AL PTP+ +S +DPH P+ + EGWYVR+T+ G +LP S + L + V +G+ L++ E + G G+ + + P+ T P F ++ AD T G LH+TL A+ P + D SP V LHW++++L + + ++ + + G G GL H EKNWG FP W WAQG+ AP + L G SPG G WDF+P + E D C R Sbjct: 8 LLLCGLAALAPTPARASLYDPHVPTMYDPAFRTWFEGWYVRITTAQPEGEGGDDGTGPVLPSSLGLIVGTMPRGRLGWNISLASLLVQQGSRALQTFESTGVQLSVTGAGGQTVVRDPEPHTPPDF-------------SVVAD-----------------------------DGTALLHMRGEQCALHVTLGGLTMDARCTGPPLRWGPNDESPEGGISGLPTQLVGLHWFVYSLGTPVAWSL--RNDSSGETVTGA------GLAHFEKNWGGTFPPGWAWAQGLDLAPGRLVPDAWL---------LGVRSPG-------------GREWDFRPQDPTSFTAEADPCNATLR 290
BLAST of NO06G04060 vs. NCBI_GenBank
Match: XP_015758722.1 (PREDICTED: uncharacterized protein LOC107337985 isoform X1 [Acropora digitifera]) HSP 1 Score: 73.9 bits (180), Expect = 1.500e-9 Identity = 67/267 (25.09%), Postives = 106/267 (39.70%), Query Frame = 0 Query: 88 GKTNKTTVYEGNPPLESVEIRGHYGRNITKSPDWRTEPHFTWRARTPSHHNSDNLTADTEAIKQEIXXXXXXXXXXXXXXXXXXXXXXXTMTAVQEGPLLFLHITLPTARFLAQIEV-SPWAYDGSPRPHSWTDIIDEVPLHWYIHTLSSRLLYARLELHQAEGAREGGKVMESRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHASSSSLPSSVAFVLSYGQVSPGIFT---HFAHFRDEELGIAWDFKPVNSVLVAEEVDGCEG 351 G + V+ G+P + V++ G+ +T PD+++ +F W A++ D QE F +I F+ + +PW G P WT DE PLHWY+++L S L+ Q G+++ R G+V +K WG FP +W+WAQG H +S S +F LS G + F+ H +R I +F+P NS L + ++ C G Sbjct: 11 GDDSSMEVFRGSPANDDVKVTSQ-GKLVTTDPDFKSSANFEWEAKSCGFFQVDE----------------------------------------QETRFNFTNIN--GVSFIGILGAPNPWGPYGE-GPEGWT---DEFPLHWYVYSLGSELINYNWVNEQT------GEMLRGRQGVVFQQKVWGNTFPLAWVWAQGF------HWASRS-----SFALSLGVLGTAGFSKPIHLVGYRSST--ITLNFRPSNSRL-RKNINECSG 210
BLAST of NO06G04060 vs. NCBI_GenBank
Match: KLO17662.1 (hypothetical protein SCHPADRAFT_155174 [Schizopora paradoxa]) HSP 1 Score: 73.6 bits (179), Expect = 1.900e-9 Identity = 39/114 (34.21%), Postives = 59/114 (51.75%), Query Frame = 0 Query: 225 VPLHWYI---HTLSSRLLYARLELHQAEGA-REGGKVMESRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHASSS-SLPSSVAFVLSYGQVSPGIFTHFAHFRDEELGIAWDF 334 +PLHW+I H+L+S L+ +++ +G+ R + G H+EKNWG FP+ W W QG + PSSHAS+S P+S P + ++ +R I WDF Sbjct: 182 IPLHWHIFSTHSLASYLITRVRRIYREDGSYRRDENTVAEGSGFAHVEKNWGDGFPEGWTWGQGFSPTPSSHASASYDRPTSTLAFAGGTTGFPFLKSYLVIYRSPSKNILWDF 295
BLAST of NO06G04060 vs. NCBI_GenBank
Match: XP_011390265.1 (hypothetical protein UMAG_03829 [Ustilago maydis 521] >KIS68247.1 hypothetical protein UMAG_03829 [Ustilago maydis 521]) HSP 1 Score: 72.0 bits (175), Expect = 5.600e-9 Identity = 39/129 (30.23%), Postives = 59/129 (45.74%), Query Frame = 0 Query: 211 GSPRPHSWTDIIDE-VPLHWYIHTLSSRLLYARLELHQAEGAREGGKVMESRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHA--SSSSLPSSVAFVLSYGQV-SPGIFTHFAHFRDEELGIAWDFKP 336 GS P W + +PLHWY+H+ S+ +++ L E + + GL+H+EKNWG+ FP W+WA + P + S SS P S+ L+ G + F H + W F P Sbjct: 339 GSRGPEGWIQHLGAFLPLHWYVHSSSAPAMFSLEHLAPDSARLELDNAIAAGRGLLHVEKNWGQSFPSGWMWAHAASPLPDPNVRPSYSSTPDSIHLSLAGGSILGLTAFLVGIHIIQDHAEFHWHFAP 467
BLAST of NO06G04060 vs. NCBI_GenBank
Match: CBQ68441.1 (conserved hypothetical protein [Sporisorium reilianum SRZ2]) HSP 1 Score: 69.3 bits (168), Expect = 3.600e-8 Identity = 44/135 (32.59%), Postives = 62/135 (45.93%), Query Frame = 0 Query: 211 GSPRPHSWTDIIDE-VPLHWYIHTLSSRLLYA--RLELHQAEGAREGGKVME----SRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHASSSSLPSSVAFVLSYGQVSPGIFTHF---AHFRDEELGIAWDFKP 336 G+ P W + +PLHWY+H+ S+ ++ + L R G ++ + GL+H+EKNWG FP W+WA G + P SSS PS + LS S T F H D E W+F P Sbjct: 341 GTRGPEGWIQHLGALLPLHWYVHSTSAPATFSLEHVALPSTSADRPRGLQLDDAVAAGRGLLHIEKNWGHAFPSGWMWAHGASPLPDPSVPSSSSPSQPSARLSLAGGSILGLTAFLVGIHITDGEQH-TWNFAP 474
BLAST of NO06G04060 vs. NCBI_GenBank
Match: CDU25356.1 (uncharacterized protein SPSC_05190 [Sporisorium scitamineum]) HSP 1 Score: 68.9 bits (167), Expect = 4.700e-8 Identity = 38/126 (30.16%), Postives = 60/126 (47.62%), Query Frame = 0 Query: 193 LPTARFLAQIEVSPWAYDGSPRPHSWTDIIDE-VPLHWYIHTLSSRLLYARLELHQAEGAREGGKV------MESRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHASSSSLPSSVAFVLSYGQV 312 +P A S W G+ P W + +PLHWY+H+ S+ ++ LE + +V + + GL+H+EKNWG+ FP W+WA G ++ P SS+ SV L+ G + Sbjct: 318 VPWQPLSASSSPSQWLPMGTRGPEGWIQHLGALIPLHWYVHSSSAPATFS-LEHVAFSSTPDEDRVPQLDDAVAAGRGLLHVEKNWGQAFPSGWMWAHGASSLPDPSVPSSTSAPSVRLSLAGGSI 442
BLAST of NO06G04060 vs. NCBI_GenBank
Match: CCX30652.1 (Similar to Probable tocopherol cyclase, chloroplastic; acc. no. Q6K7V6 [Pyronema omphalodes CBS 100304]) HSP 1 Score: 66.6 bits (161), Expect = 2.400e-7 Identity = 38/138 (27.54%), Postives = 66/138 (47.83%), Query Frame = 0 Query: 225 VPLHWYIHTLSSRLLYARLELHQAEGAREGGKVMESRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHASSSSLPSSVAFVLSYGQVSPGIFTHFAHFRDEELGIAWDFKPV--------NSVLVAEEVDGCEGRARF 355 +PLHW + + +S Y GK +E+ G+ H+EKNWG FPD W W QG + +P S + ++ FV++ G+ + G + +R E+ + + FKP+ ++ + E D +G R+ Sbjct: 177 LPLHWNVWSTASTAKYT---------VTSNGKQLEAGEGIAHIEKNWGASFPDGWTWVQGFSQSPDSGVARH---ATRTFVMTGGKTT-GSKAYLCGYRSEK--VEFSFKPLWTLMPFSFQTMFIKESFDSKQGTGRW 299
BLAST of NO06G04060 vs. NCBI_GenBank
Match: XP_014655815.1 (conserved hypothetical protein [Moesziomyces antarcticus] >GAK66137.1 conserved hypothetical protein [Moesziomyces antarcticus]) HSP 1 Score: 65.9 bits (159), Expect = 4.000e-7 Identity = 47/153 (30.72%), Postives = 68/153 (44.44%), Query Frame = 0 Query: 206 PWAYDGSPRPHSWTDIIDEV-PLHWYIHTLSSRLLYARLELHQ---AEGAREGGKVMESRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHASSSSLPSSVAFVLSYGQVSPGIFTHF---AHFRDEE-LGIAWDFKPVNSVLVAEEVDGCEG 351 P GS P W + V PLHWY+HT S+ +++ + Q + + E + + L+H+EKNWG FP W+W G A+P S S S A LS S T F H + + + W+F P ++V DG G Sbjct: 450 PHGLMGSKGPEGWIQHLGAVLPLHWYVHTSSAPAMFSLEHVVQSAPSNSSEELEDAVAAGRALLHVEKNWGHGFPSGWMWVHG--ASPLSDPSLPHTDSGPAVRLSLAGGSILGLTAFLVGIHIKPTQGREVDWNFTPPSAVGPQHAFDGPGG 600
BLAST of NO06G04060 vs. NCBI_GenBank
Match: SAM84543.1 (uncharacterized protein UBRO_05823 [Ustilago bromivora]) HSP 1 Score: 65.9 bits (159), Expect = 4.000e-7 Identity = 40/136 (29.41%), Postives = 64/136 (47.06%), Query Frame = 0 Query: 211 GSPRPHSWTDIID-EVPLHWYIHTLSSRLLYARLELHQAEG------AREGGKVMESRHGLVHLEKNWGKRFPDSWLWAQGVTAA--PSSHASSSSLPSSVAFVLSYGQV-SPGIFTHFAHFRDEELG-IAWDFKP 336 G P W + +PLHWY+H+ S+ L++ + ++G ARE K + + +H+EKNWG+ FP W+W G T PS +++++ L+ G + F H R E G W+F P Sbjct: 337 GGSGPEGWIQHLGLLLPLHWYVHSTSAPALFSIEHISLSQGQRGENEARELEKAVAAGRASLHIEKNWGQAFPSGWMWCHGSTPLLDPSLSPTTTAVEPQARISLAGGSILGLTAFLAGVHIRKEGAGEWDWNFTP 472
BLAST of NO06G04060 vs. NCBI_GenBank
Match: SJX64075.1 (uncharacterized protein SRS1_14730 [Sporisorium reilianum f. sp. reilianum]) HSP 1 Score: 65.9 bits (159), Expect = 4.000e-7 Identity = 36/105 (34.29%), Postives = 50/105 (47.62%), Query Frame = 0 Query: 211 GSPRPHSWTDIIDE-VPLHWYIHTLSSRLLYA-------RLELHQAEGAREGGKVMESRHGLVHLEKNWGKRFPDSWLWAQGVTAAPSSHASSSSLPSSVAFVLS 308 G+ P W + +PLHWY+H+ S+ ++ Q G + V R GL+H+EKNWG FP W+WA G + P SSS PS + LS Sbjct: 341 GTRGPEGWIQHLGALLPLHWYVHSTSAPATFSLEHVALPSTSADQPRGLQLDDAVAAGR-GLLHIEKNWGHAFPSGWMWAHGASPLPDPSVPSSSSPSQPSARLS 444 The following BLAST results are available for this feature:
BLAST of NO06G04060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04060 ID=NO06G04060|Name=NO06G04060|organism=Nannochloropsis oceanica|type=gene|length=1437bpback to top protein sequence of NO06G04060.1 >NO06G04060.1-protein ID=NO06G04060.1-protein|Name=NO06G04060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bpback to top Synonyms
Publications
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