NO06G03950, NO06G03950 (gene) Nannochloropsis oceanica

Overview
NameNO06G03950
Unique NameNO06G03950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3969
Alignment locationchr6:1105732..1109700 -

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Properties
Property NameValue
DescriptionVoltage-dependent anion-selective channel
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1105732..1109700 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005741mitochondrial outer membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR027246Porin_Euk/Tom40
Homology
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_024576431.1 (voltage-dependent anion-selective channel [Plasmopara halstedii] >CEG40062.1 voltage-dependent anion-selective channel [Plasmopara halstedii])

HSP 1 Score: 110.2 bits (274), Expect = 1.100e-20
Identity = 92/289 (31.83%), Postives = 129/289 (44.64%), Query Frame = 0
Query:    7 AFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284
            A FKD    A+ +L DDY   R LK+K    +GVT TTE  L   +    + AK+SG + H A+G    KLQ+   G  + E  L  V   GL  TFK E+         K  G LG EY     +  SE D V  + + ASAVL+  G  VGG  + A    KS   + + +VG +Y  +    ++V       +  S +  +      +        S  N  + +GG YK    +T  GKIN  G LS + I  V P V +T +     K  +   ++ G G TLG
Sbjct:    3 ALFKDLASTAENVLRDDYDFSRKLKIKSKASNGVTFTTEGAL---NTNKSILAKVSGGFTHSASGVVFKKLQITTQGRFITEAELPNVLTEGLKLTFKLEDGSITKNTSAKQVGVLGAEYKQKNLSFNSEADFVS-NTVSASAVLSQNGFAVGG--QTAFNVDKS--AIVQHNVGLSYTGADYVTTLVTKKNFGAVQASFHHHLSHHTVYAAVLDYDLKSASN-TLVVGGRYKVDNDTTYCGKINSEGFLSLASIQRVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: GAX24312.1 (hypothetical protein FisN_4Lh426 [Fistulifera solaris])

HSP 1 Score: 110.2 bits (274), Expect = 1.100e-20
Identity = 89/284 (31.34%), Postives = 139/284 (48.94%), Query Frame = 0
Query:    2 SKTTPAFFKDFNKPADTILNDDYSLKRTLKVK-HVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGG-KVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYG-VTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQDYRMGFGATL 283
            + T P  F D +KP   ILNDDY+ K +LK K +  P  VTI TE    G      L +KI  K+ +    F+VDK QL   GG   E ++  + P +  +FK  +    +LG++YT   F     +D+  +SK+  SA  A   G KVGGD   +L  GK+  GL  ++VG++Y     F S+V++   T   YS+      +  L++A   T+ +      V +G  YK      LK K+   G++   ++ ++ PKV +TA+          ++ GFG  +
Sbjct:   47 TNTMPTKFADIDKPVKDILNDDYTSKVSLKCKSNAGPVAVTIETERGATGA-----LASKIGTKFSYAK--FNVDKGQLTADGGSALETSMK-LTPDIKLSFKTSK--GADLGIDYTLGSFYATGVLDVQNMSKVSTSACYALPSGLKVGGDAVYSL-SGKT-TGLAGFNVGASYAKGPIFTSLVSSKFST---YSVSVGYNVNQDLTIASLTTHSAENRCNLVGVGASYKNPVIGMLKAKVGSDGVVHACLVKDIAPKVSLTASGSMLATDPSTFKPGFGIAM 315          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: CCI46192.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 109.4 bits (272), Expect = 1.900e-20
Identity = 85/288 (29.51%), Postives = 131/288 (45.49%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYP-SGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284
            FKDF K A   L DDY   R LK+K  + +GV  TTE  ++  +    + AK++  + H  +G    KLQ+   G +V E  +  V   GL  TFK E+          P G LG EY   R A  +E D +  S ++ S  + HE   VGG +   + +      L    VG++Y  S    ++      T +  S +   + S     AG L Y     +  +T+GG Y+    +T  GK+N +G +S + I  V P V ++ +     K ++   ++ G G TLG
Sbjct:    6 FKDFGKTAGDTLRDDYDFSRKLKIKTKSENGVVFTTEGAMSDNN---SILAKVATGFTHEGSGIVCKKLQISSQGRLVTEAEVPNVLTKGLKLTFKLEDGSAGKTAKVSPIGVLGAEYKQQRAAFSTEADFI-TSNVRTSLGIVHENFLVGGKLAFNVENS----SLVEHDVGASYVGSDFATTLTTMKNFTALSASFHH--RLSKDTIYAGVLDYDLKTASNTLTVGGRYRADVDTTFAGKVNSNGFVSLAAIQKVRPSVTLSTSVHFDAKNLESNAHKFGVGLTLG 283          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: CCA27070.1 (voltagedependent anionselective channel protein puta [Albugo laibachii Nc14])

HSP 1 Score: 107.8 bits (268), Expect = 5.500e-20
Identity = 84/287 (29.27%), Postives = 129/287 (44.95%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE--------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYP-SGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284
            FKDF K A   L DDY   R LK+K    +GV  TTE  +   +    + AK+   + H  TG    KLQ+   G +V E     V   GL  TFK E+         P G LG EY   R A  +E D +  S ++ S  + HE   +GG V   + +      L   +VG+++  S    ++      T +  S +   + S     AG L Y     +  +T+GG Y+  A +T  GK+N +G ++ + +  V P V ++ +     K ++   ++ G G TLG
Sbjct:    6 FKDFGKTAGDTLRDDYDFSRKLKIKTKAENGVVFTTEGAM---NDNNSILAKVGTGFTHEGTGIICKKLQISSQGRLVTEAEAPNVLTKGLKLTFKLEDGSTGKTRVNPVGVLGAEYKQQRAAFSTEADFIS-SNVRTSLGIVHENFLIGGRVAFNVENS----SLVEHNVGASFVGSDFATTLTTMKNFTAISASFHH--RLSKDTIYAGVLDYDLKTASNTLTVGGRYRVDADTTFAGKVNSNGFVALAALQKVRPSVTLSTSVHFDAKNLESNAHKFGVGLTLG 282          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: CBN78926.1 (Voltage dependent anion channel [Ectocarpus siliculosus])

HSP 1 Score: 106.7 bits (265), Expect = 1.200e-19
Identity = 75/257 (29.18%), Postives = 128/257 (49.81%), Query Frame = 0
Query:    8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATA 265
            F+ D NK A  IL+DDY+LKRTLK+KH TP GVT+T ++E         +   +  K+ H  +G S+DK +L   G +  E +   VA  +    K  +   GE+ +E+T  + + ++ +D V+ + ++ S  +A     + G     +     D  L  +SVG+A G S   AS+   +     + S Y +++ +   SV   +T P         G  Y+C+  +T++ K+N +GL+    ++    KV +T TA
Sbjct:   53 FYNDLNKVARDILSDDYNLKRTLKMKHTTPHGVTVTAKSE-----HSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDVAKNVKLVAKVNDVLKGEVSMEHTVGKSSSRATLD-VEGNWMRTSTCMAVGSSLLVGAQGDFIVGAPKDSALKSYSVGAATGGSRWGASLTCTNAMQTFNASGYYILQPNLVGSVMA-VTTPEKSETSFEAGVRYQCNPKTTVRAKMNSNGLVQACAVNRCADKVAITVTA 302          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: EWM27711.1 (voltage-dependent anion-selective channel protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 105.9 bits (263), Expect = 2.100e-19
Identity = 89/293 (30.38%), Postives = 145/293 (49.49%), Query Frame = 0
Query:    8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEE---------KPTGELGLEYTG-ARFAVKSEVDLVQLSKLKASAV--LAHEGGKVGG---DVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGN-YGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLK--TMQDYRMGFGATL 283
            FFKDF +    +LNDD++ KR LK+K  TPDGVT T+E EL+ K     + AK++ KYKH  +G S+DKL+ K  G ++GE +L  V   L      E+         K  G+LG+EY      +  S+VD+V    +  S V  LA + G + G        L +         ++VG A   ++  AS+ +    + + +S+  + + +P ++   +L Y    N  G+T+GG ++  A   L  K++ + LLS +   N++    +  +AE   K      ++ G G TL
Sbjct:    2 FFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSK----GVMAKLAAKYKH-PSGISLDKLEFKSDGRVLGEASL-DVDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSL--LSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: OEU13268.1 (hypothetical protein FRACYDRAFT_262176 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 99.4 bits (246), Expect = 1.900e-17
Identity = 85/278 (30.58%), Postives = 138/278 (49.64%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKV-KHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGG-KVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGV-TLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLK-TMQDYRMGFGATL 283
            F D  K    +L DDYS  +TLK  K   P  VTI T     G+     L +KI  K+ +G    S+DKLQ   +GG V E +L  VAP +  +FK  +    +LG++YT         +D+V++SK   SA ++   G K G D    L  GK+  G+  ++VG++Y T + F  + + +  + ++  +  + K +P ++VA   ++ +     +  +GG YK     T+K K    G++  S+I  V PKV +TA+   S       ++ G G T+
Sbjct:    5 FADIAKSPKDLLTDDYSTSQTLKCKKSAGPVAVTIET-----GRGEGGALTSKIGTKFSYGK--LSIDKLQATASGGQVLETSLK-VAPNVKVSFKSGK--GADLGIDYTQGNLYATGVLDVVEMSKFSTSACVSLPSGIKAGADATYGL-SGKT--GVTAFNVGASYATGSLFGVVTSVNKFSSVNLGL--LYKVNPLITVATMSSHSADNAVNLAAVGGTYKAD-FGTVKAKYTAGGVVCASLIKEVAPKVTLTASGSASASDPASTFKYGLGITM 266          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_008618115.1 (hypothetical protein SDRG_13795 [Saprolegnia diclina VS20] >EQC28467.1 hypothetical protein SDRG_13795 [Saprolegnia diclina VS20])

HSP 1 Score: 97.4 bits (241), Expect = 7.400e-17
Identity = 85/285 (29.82%), Postives = 130/285 (45.61%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALA-GVAPGLTFTF-------KGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284
            FKD  K A   LNDDY   R LKVK  T +GVT TTE  LA       + AK+   + H ++G +  KLQ+   G ++GE  +A  +   L   F       KG  +  G +  +Y    F++ S +D    S +  + V  +E   +G +   +L   KS +     ++G  Y  +   A+I+A      +  S    V      S        + GN  +T+GG YK +A +T   KIN  G +S + I+ + P V +T +A+   K      ++ GFG TLG
Sbjct:    6 FKDIGKKAADTLNDDYDFNRKLKVKTKTANGVTFTTEGALAANK---TILAKLGASFNH-SSGINFTKLQVTTQGRLIGEAEIANALVDNLKLGFKLEDGANKGSARQVGSVEAKYVQDNFSIHSTLDFAG-SNVSNAGVFHYENFVLGANTGFSLE--KSAISDYGGAIG--YKVADFEATILAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTAGN-TLTVGGRYKANAETTYLAKINSEGFVSIASINKLRPYVSLTTSAQIDAKNFDGDAHKFGFGITLG 280          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_009836970.1 (hypothetical protein H257_11671 [Aphanomyces astaci] >ETV73544.1 hypothetical protein H257_11671 [Aphanomyces astaci])

HSP 1 Score: 97.4 bits (241), Expect = 7.400e-17
Identity = 80/283 (28.27%), Postives = 129/283 (45.58%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFAL-AGVAPGLTFTFKGEE-----KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284
            FKD  K A+  ++DDY   R LK+K  + +GVT TTE  L        + AK+   + H ++G +V KLQ+   G ++GE  +   +   L   FK E+     K    + L+YT   F   +E+D+V  + +  + V  ++   VGG    +L        +  +    AY  +   ASIVA      +  S           S        +GGN  +T+GG Y     +T   K++  G+LS + I  + P V +T +A+  +K  +   ++ GFG TLG
Sbjct:    6 FKDIGKKANNTISDDYDFSRKLKIKTKSTNGVTFTTEGALGANK---SILAKLGASFSH-SSGLNVTKLQVTTQGRLIGEAEINNALVDNLKLGFKLEDGGKNAKQVAIVDLKYTQDAFTTHTEIDVVG-NNVTQNGVFHYDNFVVGGTTSFSL----EKQAVADYGGAVAYKAADFEASIVAKKFCKNLVTSFVHTPSKDVTYSAVYDFDSKTGGN-SLTVGGRYAADKDTTYLAKVDSEGILSLASIQKLRPFVSLTTSAQVDVKNFEGDAHKFGFGITLG 278          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_012207529.1 (hypothetical protein SPRG_13142 [Saprolegnia parasitica CBS 223.65] >KDO21726.1 hypothetical protein SPRG_13142 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16
Identity = 84/285 (29.47%), Postives = 130/285 (45.61%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALA-GVAPGLTFTF-------KGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284
            FKD  K A   LNDDY   R LKVK  T +GVT TTE  LA       + AK+   + H ++G +  KLQ+   G ++GE  +A  +   L   F       KG  +  G +  +Y    F++ S +D    S +  + V  +E   +G +   +L   KS +     ++G  Y  +   A+++A      +  S    V      S        + GN  +T+GG YK +A +T   KIN  G +S + I+ + P V +T +A+   K      ++ GFG TLG
Sbjct:    6 FKDIGKKAADTLNDDYDFNRKLKVKTKTTNGVTFTTEGALAANK---TILAKLGASFNH-SSGINFTKLQVTTQGRLIGEAEIANALVDNLKLGFKLEDGANKGSARQVGSVEAKYVQDNFSIHSTLDFAG-SNVSNAGVFHYENFVLGANTGFSLE--KSAISDYGGAIG--YKVADFEATLLAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTAGN-TLTVGGRYKANAETTYLAKINSEGFVSIASINKLRPYVSLTTSAQIDAKNFDGDAHKFGFGITLG 280          
The following BLAST results are available for this feature:
BLAST of NO06G03950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_024576431.11.100e-2031.83voltage-dependent anion-selective channel [Plasmop... [more]
GAX24312.11.100e-2031.34hypothetical protein FisN_4Lh426 [Fistulifera sola... [more]
CCI46192.11.900e-2029.51unnamed protein product [Albugo candida][more]
CCA27070.15.500e-2029.27voltagedependent anionselective channel protein pu... [more]
CBN78926.11.200e-1929.18Voltage dependent anion channel [Ectocarpus silicu... [more]
EWM27711.12.100e-1930.38voltage-dependent anion-selective channel protein ... [more]
OEU13268.11.900e-1730.58hypothetical protein FRACYDRAFT_262176 [Fragilario... [more]
XP_008618115.17.400e-1729.82hypothetical protein SDRG_13795 [Saprolegnia dicli... [more]
XP_009836970.17.400e-1728.27hypothetical protein H257_11671 [Aphanomyces astac... [more]
XP_012207529.11.300e-1629.47hypothetical protein SPRG_13142 [Saprolegnia paras... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000078NSK000078Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03950.1NO06G03950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|125958gene_6727Nannochloropsis oceanica (N. oceanica CCMP1779)gene
VDACgene4138Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03950.1NO06G03950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03950 ID=NO06G03950|Name=NO06G03950|organism=Nannochloropsis oceanica|type=gene|length=3969bp
GCTGTGAATGGGGGAATGGGGGAGAAAATTCGAATAGGTGCAGGTCAGCG
TAGAGATAAATTGAGACCATGCCCATCATCATAAATCACAAACAGCATCA
TTAAGATCATCCACGCGTGCTATATTTTTTTGTGTACAGGCGCGTCTTTA
TCTGGTAACGGGTTTGGACCTGCTCGTGACAGGGGGAAGGGGCGTCAAAG
CGAGACACCGCGCAACCAACCAGGAGAAGTTGGCAACATAGCATATGCTA
CTGCACTCTAAGTTTTCTAAAAAGGCGTTCGTTGAGCTGGTCATTCATTA
TTGTCTATGGTTGGGTTCGTTTAGGGAGAGTGAAATGAACGGGCTTGCAT
TGCTTGCTTTTGCGACAGGGGGTTAAAGCGCTCGCCAACGCCGATCTGTG
AGGTAGACGAGGCGTGCGCGTACTTTCCTTTGGACAGCGCTTCAGAGTAT
GTGAAGCACTATAGCTTTTCACGCTCAAGTATAAGTTGTGCATAGTTTGT
GGGTTCTCTGATGCCTTCCCATTTTTACCTCCCCGTATCCGTGCTTGGGT
GGCCGTTGTTGAAAGCCCAACACTTGACTGCTGTAATTTCTGTTGCGTGG
GGGAGCGTGGCGTCAAGAAAGGGAAGCATACGTCAAAGAGCGTTCGACGG
CATCGTGTGAGTTAAAAGATGAGCCGCCGCGGGCTGGTTAAGGGCCCTTA
CACAGAGATGGATGGCATTCGCACGAGGTGGTGTCAAGTGGCAAGTTGCT
GGCGCCAAAGAAGCAAGCAACCAGGGGGCGTCACCACATTTGCCTGGCAT
GTGAATCTGAGCGTGTCTTTGAGTATAGCACGCCGTACAGCGTGGCTTCC
GACGCAACGGGACAGCTAGTATCATACTCTCCTAGCCATCCCTGGCTCTC
GGGTCCCAACTTTCACACAAACACACAAACACACGCGTACACACACAGAT
CCTCCTTCTACCTCTCCAAGCAACCATGAGCAAAACTACCCCGGCTTTTT
TCAAGGACTTTAACAAGCCAGCTGACAgtaagttcatggtgaacagatgg
agaatgggatggatgtgtgcgtgggagagtgagaggggacaggggaaggc
attttgatcgacatgttttgatcgacatgagcagcaccagcagcatcacc
atgacatgttaggagcagcagggctgcatgcggcagtgatggcacagtgg
caaagttctctcacactattttcacatctttcgcgtccccttttcacagC
CATCCTCAACGATGACTACTCGCTCAAGCGCACGCTCAAGGTCAAGCACG
TCACCCCTGACGGCGTGgtacgtacctctaggattggaggccggtcctcc
ctgctttcctccctctcctctttgtctttgcctccttcgtgctgtatggt
ttttccacgcatctcctgcatgacgtccgcacggggttcacgcagtaaat
aaatagcatgcatatcaaacactccatttctgtcgtcttactccacccat
ccctccctcccatttccttcccttctccttgtctcatgaagACCATCACC
ACCGAGAACGAGCTGGCCGGAAAGGACGGGAAGTACGACCTGAAGGCTAA
GATTTCGGGGAAGTATAAGCACGGTGCCACCGGCTTTTCGGTGGACAAGC
TACAGCTTAAGGAGACGGGCGGCATgtaaggagggagagagggagagagg
gagaaagggagagaaagagagtggactctatggtttgtataaagaaatta
tgattcggggctggacgcctgatgatcacacatgagataattgttcttct
ctttgacgtacctccttccttccctccctccctccctccctccctccctc
cctcacagAGTGGGTGAGTTCGCCCTGGCAGGCGTGGCCCCCGGTCTGAC
CTTCACCTTTAAGGGGGAAGAGAAGCCCACAGGTGAGCTTGGCCTCGAAT
ACACGGGGGCGCGGTTTGCGGTCAAGAGCGAGgtgaggaaaagagggagg
gagggagggaggaaaagaggggaagtgcgagggtacgtcaggttgcggca
tggtgatgtggtgccaacagaccatttccttcctccctttcttcctccct
ccctccctccctccctccccccttccctttatttcagGTGGACCTGGTCC
AATTGAGTAAGCTCAAGGCCTCGGCGGTGCTGGCGCACGAGGGCGGCAAG
gtacgaccttttcctccctccctccctccctccctctcttcccctccatc
accctcttacctaccccctccctccctccctctttagGTGGGTGGTGATG
TGGAGGTGGCCCTGCCGGACGGGAAGAGCGATCTCGGTCTCAACCGTTGG
TCGGTGGGAAGTGCCTATGGCACCTCCACCTCCTTCGCCTCCATTGTCGC
CGCCAGCGgtacgtttcctccctccctccctccctccctccctttgattc
atcgatcatggtttggcctgagagggcaggattccagagatgtggtgaca
gaggtggtggaggtgctgctgctgctgctgctgctccctatcagcaaggc
tcacccctccctccctccctccctccttcccatccacagGCAAGACCGGG
ATGGACTATTCGATCTACGGCGTGGTGAAGACCAGCCCCCCCCTCTCCGT
GGCCGGCAAGCTCACCTACCCCTCGGGCGgtacgtcaggcgggaaggagg
gggggaggggaaagagacgaggaggaagggagcgatcgacagatagaaag
acattcaacgaacttcctccctccatccctccctccatccctccctccct
cctttctatcctccccccctccctcaattccttctttcttccctccctcg
ctgcagGCAACTACGGCGTTACTTTAGGTGGGATTTACAAGTGCTCAGCC
ACCTCCACCCTCAAGGGCAAGATCAACATGAGCGGTCTCCTGTCGACCTC
AATCATCCACgtaaggagagaggggaaggggtgggagggtgagaagaatg
gaatgggattggatgaaggacggtagcccccgaaagcaacaaaccagcaa
tagcacatgaacgcacgcccctcaacccgccttccctccctcccttcctc
cctcagAACGTCCACCCCAAGGTGCAAGTGACGGCCACGGCCGAAGGCTC
CCTCAAGACCATGCAGGACTACAGGATGGGCTTCGGGGCCACGCTCGGGT
AGTTAGGTTGATGTAGGGAAGGAGGGACGGGGGAGAGGGGGTAGGGAAGG
AGGGAAGGACGGAGGGATGGAGGGAGGGGGCAGCAGAAGAATGGCTCGTA
CCTTCTCCTCTTTTCCCTACTCTCTCCTCCTTCTTAATGCTGGAGGTGTT
GGGAGGGTCATGTGAACGAAGGAAGGAGGAAAGCTCATATTTATTGCCCT
TGCTTTTCGGTTCAATCACTATTATAGAGAGATGAATATGGGAAAAAAGC
GATCCCTAAAAAAAACAGAAAAACACCAAAAAAAAATCGAAAGGGATGCG
ATGTTGGGAAAGAAAGAAAGGCTTTGTCATTCTTAATTCTTGGACCATAC
CCGGATGATGATGGCACGAAAGCCACATACATATTATCCACCTCCACTTG
CAGTGGAGGACGGGAGGGAGGGAGGACGACGGTATGTCAGGTCGTTAAGG
TTTTATGGAAGCACTTGTGGCGGTCATGGGAGTGAGTGTTAGCATTGTGG
CAGGCACAAGCCAGAGAAGACGAAGAGGGAAAGGAGAAGTAAGGATGAAG
AAGAAAGTTTCTCGGGAAAAGTGGGAGAGAGAGGTTTTCGTGAAGCATAA
TCAGGAGGAGCATAAGGATGAGGAGGAGAAAAAGGAAGAGGAGGAATAGA
TGGGGAAAAAAGATGAGGAGATAAACGCAGCAAAGAAAATAAGAAACGAA
AACAACGAAGACAAGAAATCAACTTTTTGGATCGATTTGCGTAAATCGTG
AAGATTACGATTCTCAGCA
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protein sequence of NO06G03950.1

>NO06G03950.1-protein ID=NO06G03950.1-protein|Name=NO06G03950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bp
MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAG
KDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTF
TFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGG
DVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVV
KTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSI
IHNVHPKVQVTATAEGSLKTMQDYRMGFGATLG*
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Synonyms
Publications