NO06G03950, NO06G03950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_024576431.1 (voltage-dependent anion-selective channel [Plasmopara halstedii] >CEG40062.1 voltage-dependent anion-selective channel [Plasmopara halstedii]) HSP 1 Score: 110.2 bits (274), Expect = 1.100e-20 Identity = 92/289 (31.83%), Postives = 129/289 (44.64%), Query Frame = 0 Query: 7 AFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284 A FKD A+ +L DDY R LK+K +GVT TTE L + + AK+SG + H A+G KLQ+ G + E L V GL TFK E+ K G LG EY + SE D V + + ASAVL+ G VGG + A KS + + +VG +Y + ++V + S + + + S N + +GG YK +T GKIN G LS + I V P V +T + K + ++ G G TLG Sbjct: 3 ALFKDLASTAENVLRDDYDFSRKLKIKSKASNGVTFTTEGAL---NTNKSILAKVSGGFTHSASGVVFKKLQITTQGRFITEAELPNVLTEGLKLTFKLEDGSITKNTSAKQVGVLGAEYKQKNLSFNSEADFVS-NTVSASAVLSQNGFAVGG--QTAFNVDKS--AIVQHNVGLSYTGADYVTTLVTKKNFGAVQASFHHHLSHHTVYAAVLDYDLKSASN-TLVVGGRYKVDNDTTYCGKINSEGFLSLASIQRVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282
BLAST of NO06G03950 vs. NCBI_GenBank
Match: GAX24312.1 (hypothetical protein FisN_4Lh426 [Fistulifera solaris]) HSP 1 Score: 110.2 bits (274), Expect = 1.100e-20 Identity = 89/284 (31.34%), Postives = 139/284 (48.94%), Query Frame = 0 Query: 2 SKTTPAFFKDFNKPADTILNDDYSLKRTLKVK-HVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGG-KVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYG-VTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQDYRMGFGATL 283 + T P F D +KP ILNDDY+ K +LK K + P VTI TE G L +KI K+ + F+VDK QL GG E ++ + P + +FK + +LG++YT F +D+ +SK+ SA A G KVGGD +L GK+ GL ++VG++Y F S+V++ T YS+ + L++A T+ + V +G YK LK K+ G++ ++ ++ PKV +TA+ ++ GFG + Sbjct: 47 TNTMPTKFADIDKPVKDILNDDYTSKVSLKCKSNAGPVAVTIETERGATGA-----LASKIGTKFSYAK--FNVDKGQLTADGGSALETSMK-LTPDIKLSFKTSK--GADLGIDYTLGSFYATGVLDVQNMSKVSTSACYALPSGLKVGGDAVYSL-SGKT-TGLAGFNVGASYAKGPIFTSLVSSKFST---YSVSVGYNVNQDLTIASLTTHSAENRCNLVGVGASYKNPVIGMLKAKVGSDGVVHACLVKDIAPKVSLTASGSMLATDPSTFKPGFGIAM 315
BLAST of NO06G03950 vs. NCBI_GenBank
Match: CCI46192.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 109.4 bits (272), Expect = 1.900e-20 Identity = 85/288 (29.51%), Postives = 131/288 (45.49%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYP-SGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284 FKDF K A L DDY R LK+K + +GV TTE ++ + + AK++ + H +G KLQ+ G +V E + V GL TFK E+ P G LG EY R A +E D + S ++ S + HE VGG + + + L VG++Y S ++ T + S + + S AG L Y + +T+GG Y+ +T GK+N +G +S + I V P V ++ + K ++ ++ G G TLG Sbjct: 6 FKDFGKTAGDTLRDDYDFSRKLKIKTKSENGVVFTTEGAMSDNN---SILAKVATGFTHEGSGIVCKKLQISSQGRLVTEAEVPNVLTKGLKLTFKLEDGSAGKTAKVSPIGVLGAEYKQQRAAFSTEADFI-TSNVRTSLGIVHENFLVGGKLAFNVENS----SLVEHDVGASYVGSDFATTLTTMKNFTALSASFHH--RLSKDTIYAGVLDYDLKTASNTLTVGGRYRADVDTTFAGKVNSNGFVSLAAIQKVRPSVTLSTSVHFDAKNLESNAHKFGVGLTLG 283
BLAST of NO06G03950 vs. NCBI_GenBank
Match: CCA27070.1 (voltagedependent anionselective channel protein puta [Albugo laibachii Nc14]) HSP 1 Score: 107.8 bits (268), Expect = 5.500e-20 Identity = 84/287 (29.27%), Postives = 129/287 (44.95%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE--------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYP-SGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284 FKDF K A L DDY R LK+K +GV TTE + + + AK+ + H TG KLQ+ G +V E V GL TFK E+ P G LG EY R A +E D + S ++ S + HE +GG V + + L +VG+++ S ++ T + S + + S AG L Y + +T+GG Y+ A +T GK+N +G ++ + + V P V ++ + K ++ ++ G G TLG Sbjct: 6 FKDFGKTAGDTLRDDYDFSRKLKIKTKAENGVVFTTEGAM---NDNNSILAKVGTGFTHEGTGIICKKLQISSQGRLVTEAEAPNVLTKGLKLTFKLEDGSTGKTRVNPVGVLGAEYKQQRAAFSTEADFIS-SNVRTSLGIVHENFLIGGRVAFNVENS----SLVEHNVGASFVGSDFATTLTTMKNFTAISASFHH--RLSKDTIYAGVLDYDLKTASNTLTVGGRYRVDADTTFAGKVNSNGFVALAALQKVRPSVTLSTSVHFDAKNLESNAHKFGVGLTLG 282
BLAST of NO06G03950 vs. NCBI_GenBank
Match: CBN78926.1 (Voltage dependent anion channel [Ectocarpus siliculosus]) HSP 1 Score: 106.7 bits (265), Expect = 1.200e-19 Identity = 75/257 (29.18%), Postives = 128/257 (49.81%), Query Frame = 0 Query: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATA 265 F+ D NK A IL+DDY+LKRTLK+KH TP GVT+T ++E + + K+ H +G S+DK +L G + E + VA + K + GE+ +E+T + + ++ +D V+ + ++ S +A + G + D L +SVG+A G S AS+ + + S Y +++ + SV +T P G Y+C+ +T++ K+N +GL+ ++ KV +T TA Sbjct: 53 FYNDLNKVARDILSDDYNLKRTLKMKHTTPHGVTVTAKSE-----HSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDVAKNVKLVAKVNDVLKGEVSMEHTVGKSSSRATLD-VEGNWMRTSTCMAVGSSLLVGAQGDFIVGAPKDSALKSYSVGAATGGSRWGASLTCTNAMQTFNASGYYILQPNLVGSVMA-VTTPEKSETSFEAGVRYQCNPKTTVRAKMNSNGLVQACAVNRCADKVAITVTA 302
BLAST of NO06G03950 vs. NCBI_GenBank
Match: EWM27711.1 (voltage-dependent anion-selective channel protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 105.9 bits (263), Expect = 2.100e-19 Identity = 89/293 (30.38%), Postives = 145/293 (49.49%), Query Frame = 0 Query: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEE---------KPTGELGLEYTG-ARFAVKSEVDLVQLSKLKASAV--LAHEGGKVGG---DVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGN-YGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLK--TMQDYRMGFGATL 283 FFKDF + +LNDD++ KR LK+K TPDGVT T+E EL+ K + AK++ KYKH +G S+DKL+ K G ++GE +L V L E+ K G+LG+EY + S+VD+V + S V LA + G + G L + ++VG A ++ AS+ + + + +S+ + + +P ++ +L Y N G+T+GG ++ A L K++ + LLS + N++ + +AE K ++ G G TL Sbjct: 2 FFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSK----GVMAKLAAKYKH-PSGISLDKLEFKSDGRVLGEASL-DVDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPEFLDYNVGLAKVNTSWEASVRSYHKMSNLQFSL--LSRVNPQVTFGAQLDYQVDKNTQGMTIGGCFRPDADIRLSAKMSSTALLSIAYTQNLNKFAHLLLSAEVDAKDWASDSHKFGLGLTL 286
BLAST of NO06G03950 vs. NCBI_GenBank
Match: OEU13268.1 (hypothetical protein FRACYDRAFT_262176 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 99.4 bits (246), Expect = 1.900e-17 Identity = 85/278 (30.58%), Postives = 138/278 (49.64%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKV-KHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGG-KVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGV-TLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLK-TMQDYRMGFGATL 283 F D K +L DDYS +TLK K P VTI T G+ L +KI K+ +G S+DKLQ +GG V E +L VAP + +FK + +LG++YT +D+V++SK SA ++ G K G D L GK+ G+ ++VG++Y T + F + + + + ++ + + K +P ++VA ++ + + +GG YK T+K K G++ S+I V PKV +TA+ S ++ G G T+ Sbjct: 5 FADIAKSPKDLLTDDYSTSQTLKCKKSAGPVAVTIET-----GRGEGGALTSKIGTKFSYGK--LSIDKLQATASGGQVLETSLK-VAPNVKVSFKSGK--GADLGIDYTQGNLYATGVLDVVEMSKFSTSACVSLPSGIKAGADATYGL-SGKT--GVTAFNVGASYATGSLFGVVTSVNKFSSVNLGL--LYKVNPLITVATMSSHSADNAVNLAAVGGTYKAD-FGTVKAKYTAGGVVCASLIKEVAPKVTLTASGSASASDPASTFKYGLGITM 266
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_008618115.1 (hypothetical protein SDRG_13795 [Saprolegnia diclina VS20] >EQC28467.1 hypothetical protein SDRG_13795 [Saprolegnia diclina VS20]) HSP 1 Score: 97.4 bits (241), Expect = 7.400e-17 Identity = 85/285 (29.82%), Postives = 130/285 (45.61%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALA-GVAPGLTFTF-------KGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284 FKD K A LNDDY R LKVK T +GVT TTE LA + AK+ + H ++G + KLQ+ G ++GE +A + L F KG + G + +Y F++ S +D S + + V +E +G + +L KS + ++G Y + A+I+A + S V S + GN +T+GG YK +A +T KIN G +S + I+ + P V +T +A+ K ++ GFG TLG Sbjct: 6 FKDIGKKAADTLNDDYDFNRKLKVKTKTANGVTFTTEGALAANK---TILAKLGASFNH-SSGINFTKLQVTTQGRLIGEAEIANALVDNLKLGFKLEDGANKGSARQVGSVEAKYVQDNFSIHSTLDFAG-SNVSNAGVFHYENFVLGANTGFSLE--KSAISDYGGAIG--YKVADFEATILAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTAGN-TLTVGGRYKANAETTYLAKINSEGFVSIASINKLRPYVSLTTSAQIDAKNFDGDAHKFGFGITLG 280
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_009836970.1 (hypothetical protein H257_11671 [Aphanomyces astaci] >ETV73544.1 hypothetical protein H257_11671 [Aphanomyces astaci]) HSP 1 Score: 97.4 bits (241), Expect = 7.400e-17 Identity = 80/283 (28.27%), Postives = 129/283 (45.58%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFAL-AGVAPGLTFTFKGEE-----KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284 FKD K A+ ++DDY R LK+K + +GVT TTE L + AK+ + H ++G +V KLQ+ G ++GE + + L FK E+ K + L+YT F +E+D+V + + + V ++ VGG +L + + AY + ASIVA + S S +GGN +T+GG Y +T K++ G+LS + I + P V +T +A+ +K + ++ GFG TLG Sbjct: 6 FKDIGKKANNTISDDYDFSRKLKIKTKSTNGVTFTTEGALGANK---SILAKLGASFSH-SSGLNVTKLQVTTQGRLIGEAEINNALVDNLKLGFKLEDGGKNAKQVAIVDLKYTQDAFTTHTEIDVVG-NNVTQNGVFHYDNFVVGGTTSFSL----EKQAVADYGGAVAYKAADFEASIVAKKFCKNLVTSFVHTPSKDVTYSAVYDFDSKTGGN-SLTVGGRYAADKDTTYLAKVDSEGILSLASIQKLRPFVSLTTSAQVDVKNFEGDAHKFGFGITLG 278
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_012207529.1 (hypothetical protein SPRG_13142 [Saprolegnia parasitica CBS 223.65] >KDO21726.1 hypothetical protein SPRG_13142 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16 Identity = 84/285 (29.47%), Postives = 130/285 (45.61%), Query Frame = 0 Query: 9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALA-GVAPGLTFTF-------KGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284 FKD K A LNDDY R LKVK T +GVT TTE LA + AK+ + H ++G + KLQ+ G ++GE +A + L F KG + G + +Y F++ S +D S + + V +E +G + +L KS + ++G Y + A+++A + S V S + GN +T+GG YK +A +T KIN G +S + I+ + P V +T +A+ K ++ GFG TLG Sbjct: 6 FKDIGKKAADTLNDDYDFNRKLKVKTKTTNGVTFTTEGALAANK---TILAKLGASFNH-SSGINFTKLQVTTQGRLIGEAEIANALVDNLKLGFKLEDGANKGSARQVGSVEAKYVQDNFSIHSTLDFAG-SNVSNAGVFHYENFVLGANTGFSLE--KSAISDYGGAIG--YKVADFEATLLAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTAGN-TLTVGGRYKANAETTYLAKINSEGFVSIASINKLRPYVSLTTSAQIDAKNFDGDAHKFGFGITLG 280 The following BLAST results are available for this feature:
BLAST of NO06G03950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03950 ID=NO06G03950|Name=NO06G03950|organism=Nannochloropsis oceanica|type=gene|length=3969bpback to top protein sequence of NO06G03950.1 >NO06G03950.1-protein ID=NO06G03950.1-protein|Name=NO06G03950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bpback to top Synonyms
Publications
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