NO06G03950, NO06G03950 (gene) Nannochloropsis oceanica

Overview
NameNO06G03950
Unique NameNO06G03950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3969
Alignment locationchr6:1105732..1109700 -

Link to JBrowse

Properties
Property NameValue
DescriptionVoltage-dependent anion-selective channel
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1105732..1109700 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005741mitochondrial outer membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR027246Porin_Euk/Tom40
Homology
BLAST of NO06G03950 vs. NCBI_GenBank
Match: EWM26391.1 (voltage-dependent anion-selective channel [Nannochloropsis gaditana])

HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0
Query:    1 MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGI 86
            MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGV +TTENEL GKDGK+DLKAKISGKYKH ATGFSVDKLQLKETGG+
Sbjct:    1 MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_002286145.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95786.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 120.6 bits (301), Expect = 8.100e-24
Identity = 93/278 (33.45%), Postives = 142/278 (51.08%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVK-HVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGG-KVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGV-TLGGIYK-CSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQDYRMGFGATL 283
            + D  K A  +LNDDY+   +LK K    P GVT+ TE   AG      L +K+  K+ +   G + DKLQ K  G  V E +LA  A G   TFK  +    +LG+EYT         +D++ +SKL  S  +    G  VGGD+   L   K+  GL+ ++VG++Y T   FAS+ +AS  +   +++  + K +  LS+A   T+ SG    V  +GG Y   +A  T+K K+  +G+ S  +I  V PKV +TA+   S      ++ G G ++
Sbjct:    5 YSDIGKSAKDLLNDDYTNSISLKCKGKAGPVGVTVETERSPAG-----TLSSKVGTKFSY--AGLNFDKLQAKADGSNVLETSLAPCA-GCKVTFKANK--GADLGVEYTAGSIVTTGALDVLNMSKLSTSTCIGVAPGINVGGDLSYNLSGDKA--GLSSYNVGASYATGPLFASVTSASKFS--QFNVGVLYKVNKDLSLASNTTHSSGKACDVLAIGGAYSGLAAVGTIKAKVGSNGVTSACLIKEVAPKVNLTASGSISGVDFSTFKYGLGISM 268          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_009530783.1 (hypothetical protein PHYSODRAFT_354972 [Phytophthora sojae] >EGZ13354.1 hypothetical protein PHYSODRAFT_354972 [Phytophthora sojae])

HSP 1 Score: 118.6 bits (296), Expect = 3.100e-23
Identity = 94/287 (32.75%), Postives = 136/287 (47.39%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284
            +KD  K A+ +L DDY   R LK+K    +GV+ TTE  L   +    + AK+SG + HGA+G    KLQ+   G +V E  L  V   GL  TFK E+         K  G LG EY  +  AV SE D V  + + A+AVL+  G  VGG  + A    KS   + + +VG++Y  +    S+V       +  S +  +  +   +        S  N  + +GG YK  A +T  GKI+  G LS + I  V P V +T +     K  +   ++ G G TLG
Sbjct:    5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGAL---NANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTQGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQSNLAVNSEADFVS-NTVSAAAVLSQGGFAVGG--QTAFNMDKS--AIVQHNVGASYTGADFVTSLVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKADADTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_002895339.1 (voltage-dependent anion-selective channel protein, putative [Phytophthora infestans T30-4] >EEY58505.1 voltage-dependent anion-selective channel protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 116.7 bits (291), Expect = 1.200e-22
Identity = 93/287 (32.40%), Postives = 135/287 (47.04%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284
            +KD  K A+ +L DDY   R LK+K    +GV+ TTE  L   +G   + AK+SG + HGA+G    KLQ+   G +V E  L  V   GL  TFK E+         K  G LG EY     AV SE D V  + + A+AVL+  G  VGG  + A    KS +  + +  G+++  +    S+V       +  S +  +  +   +        S  N  + +GG YK  A +T  GKI+  G LS + I  V P V +T +     K  +   ++ G G TLG
Sbjct:    5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGAL---NGNKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVAKNTNAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAVGG--QTAFNVDKSIIVQHNF--GASFTGADFVTSLVTKKNFAALQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKADADTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: OWZ21520.1 (Voltage-dependent anion-selective channel protein [Phytophthora megakarya])

HSP 1 Score: 115.5 bits (288), Expect = 2.600e-22
Identity = 94/287 (32.75%), Postives = 133/287 (46.34%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284
            +KD  K A+ +L DDY   R LK+K    +GV  TTE  L   +    + AK+SG + HGA+G    KLQ+   G +V E  L  V   GL  TFK E+         K  G LG EY     AV SE D V  + + A+AVL+  G  VGG  + A    KS   + + +VG+++  S    SIV       +  S +  +  +   +        S  N  + +GG YK    +T  GKI+  G LS + I  V P V +T +     K  +   ++ G G TLG
Sbjct:    5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVAFTTEGAL---NANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAVGG--QTAFNVDKS--AIVQHNVGASFTGSDFVTSIVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKADNDTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: POM65519.1 (Voltage-dependent anion-selective channel protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 115.5 bits (288), Expect = 2.600e-22
Identity = 94/287 (32.75%), Postives = 133/287 (46.34%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284
            +KD  K A+ +L DDY   R LK+K    +GV  TTE  L   +    + AK+SG + H A+G    KLQ+   G +V E  L  V   GL  TFK E+         K  G LG EY     AV SE D V  + + A+AVL+  G  VGG  + A    KS   + + +VG+++  S    SIV       +  S +  +  +   +        S  N  + +GG YK  A +T  GKI+  G LS + I  V P V +T +     K  +   ++ G G TLG
Sbjct:    5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVAFTTEGAL---NANKSILAKVSGGFTHSASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAVGG--QTAFNVDKS--AIVQHNVGASFTGSDFVTSIVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKADADTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: XP_008911143.1 (hypothetical protein PPTG_15631 [Phytophthora parasitica INRA-310] >ETI38057.1 hypothetical protein F443_16075 [Phytophthora parasitica P1569] >ETK78275.1 hypothetical protein L915_15619 [Phytophthora parasitica] >ETL31705.1 hypothetical protein L916_15515 [Phytophthora parasitica] >ETL84992.1 hypothetical protein L917_15336 [Phytophthora parasitica] >ETN03370.1 hypothetical protein PPTG_15631 [Phytophthora parasitica INRA-310] >ETO66826.1 hypothetical protein F444_16059 [Phytophthora parasitica P1976] >ETP07942.1 hypothetical protein F441_15904 [Phytophthora parasitica CJ01A1] >ETP35985.1 hypothetical protein F442_15925 [Phytophthora parasitica P10297] >KUF79046.1 Voltage-dependent anion-selective channel protein 2 [Phytophthora nicotianae] >KUF86844.1 hypothetical protein AM588_10001387 [Phytophthora nicotianae] >KUF96188.1 Voltage-dependent anion-selective channel protein 2 [Phytophthora nicotianae])

HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21
Identity = 90/287 (31.36%), Postives = 134/287 (46.69%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284
            +KD  K A+ +L DDY   R LK+K    +GV+ TTE  L   +    + AK+SG + HGA+G    KLQ+   G +V E  L  V   GL  TFK E+         K  G LG EY     AV SE D V  + + A+AVL+  G  +GG  + A    KS   + + +VG+++  +    ++V       +  S +  +  +   +        S  N  + +GG YK    +T  GKI+  G LS + I  V P V +T +     K  +   ++ G G TLG
Sbjct:    5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGAL---NANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVAKNTSAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAIGG--QTAFNVDKS--AIVQHNVGASFTGADFVTTLVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKVDNDTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: ETM38102.1 (hypothetical protein L914_15470 [Phytophthora parasitica])

HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21
Identity = 90/287 (31.36%), Postives = 134/287 (46.69%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGEE---------KPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQ--DYRMGFGATLG 284
            +KD  K A+ +L DDY   R LK+K    +GV+ TTE  L   +    + AK+SG + HGA+G    KLQ+   G +V E  L  V   GL  TFK E+         K  G LG EY     AV SE D V  + + A+AVL+  G  +GG  + A    KS   + + +VG+++  +    ++V       +  S +  +  +   +        S  N  + +GG YK    +T  GKI+  G LS + I  V P V +T +     K  +   ++ G G TLG
Sbjct:    5 YKDLAKTAENVLRDDYDFSRKLKIKSKASNGVSFTTEGAL---NANKSILAKVSGGFTHGASGVVFKKLQITTQGRVVTEAELPNVLTEGLKLTFKLEDGSVSKNTSAKQVGVLGAEYKQKNLAVNSEADFVS-NTVSAAAVLSQGGFAIGG--QTAFNVDKS--AIVQHNVGASFTGADFVTTLVTKKNFAAVQASFHHHLSHNTVYAAVLDYDLKSASN-TLVVGGRYKVDNDTTYCGKIDSEGFLSLASIQKVRPYVTLTTSVHVDAKNFEGDSHKFGLGLTLG 282          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: GAX26070.1 (hypothetical protein FisN_4Hh426 [Fistulifera solaris])

HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21
Identity = 89/280 (31.79%), Postives = 138/280 (49.29%), Query Frame = 0
Query:    6 PAFFKDFNKPADTILNDDYSLKRTLKVK-HVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTFTFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGG-KVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTYPSGGNYG-VTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQDYRMGFGATL 283
            P  F D +KP   ILNDDY+ K +LK K +  P  VTI TE    G      L +KI  K+ +    F+VDK QL   GG   E ++  + P +  +FK  +    +LG++YT   F     +D+  +SK+  SA  A   G KVGGD   +L  GK+  GL  ++VG++Y     F S+V++   T   YS+      +P L++A   T+ +      V +G  YK      LK K+   G++   ++ ++ PKV +TA+          ++ GFG  +
Sbjct:    2 PTKFADIDKPVKDILNDDYTSKVSLKCKSNAGPVAVTIETERGATGA-----LASKIGTKFSYAK--FNVDKGQLTADGGSALETSMK-LTPDIKLSFKTSK--GADLGIDYTLGSFYATGVLDVQNMSKVSTSACYALPSGLKVGGDAVYSL-SGKT-TGLAGFNVGASYAKGPIFTSLVSSKFST---YSVSVGYNVNPDLTIASLTTHSAENRCNLVGVGASYKNPVIGMLKAKVGSDGIIHACLVKDIAPKVSLTASGSMLATDPSTFKPGFGIAM 266          
BLAST of NO06G03950 vs. NCBI_GenBank
Match: GAX94729.1 (voltage-dependent anion-selective channel protein, putative [Pythium insidiosum])

HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21
Identity = 90/289 (31.14%), Postives = 132/289 (45.67%), Query Frame = 0
Query:    9 FKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAGKDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGV-APGLTFTFKGE---------EKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGGDVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVVKTSPPLSVAGKLTY--PSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSIIHNVHPKVQVTATAEGSLKTMQD--YRMGFGATLG 284
            FKD +K A+ +L DDY   R LK+K    +GV  T+E +L   +    + AK+SG + H  +G    KLQ+   G ++ E  L  V   GL FT K E          K  G +GLEY   +F+   EVD +  + +KA+ V   +G  VGG V   +        L   +VG ++  +    S+V       +  S +   K S     A  L Y   S  N  + +GG YK  A +T  GKIN  G +S + I  + P V +T +     K  +   ++ G G TLG
Sbjct:    5 FKDLSKTAEDVLKDDYDFSRKLKIKSKASNGVAFTSEGQL---NANKSILAKVSGAFTHDGSGVVFKKLQVTTQGRLITEAELPNVFTKGLNFTLKLEXGSVAKNTSAKQVGVVGLEYKQDKFSFNKEVDFIG-NNIKAAGVFQQDGFLVGGQVGFNVDKSV----LTEHNVGVSFVGADMATSLVTKKNFGALSASFHH--KLSKDTVYAAVLDYDLKSAAN-TLNVGGRYKADAXTTYAGKINSEGFVSLASIQKIRPYVTLTTSVHVDAKNFEGDAHKFGIGLTLG 282          
The following BLAST results are available for this feature:
BLAST of NO06G03950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26391.11.300e-3792.94voltage-dependent anion-selective channel [Nannoch... [more]
XP_002286145.18.100e-2433.45predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_009530783.13.100e-2332.75hypothetical protein PHYSODRAFT_354972 [Phytophtho... [more]
XP_002895339.11.200e-2232.40voltage-dependent anion-selective channel protein,... [more]
OWZ21520.12.600e-2232.75Voltage-dependent anion-selective channel protein ... [more]
POM65519.12.600e-2232.75Voltage-dependent anion-selective channel protein ... [more]
XP_008911143.12.900e-2131.36hypothetical protein PPTG_15631 [Phytophthora para... [more]
ETM38102.12.900e-2131.36hypothetical protein L914_15470 [Phytophthora para... [more]
GAX26070.12.900e-2131.79hypothetical protein FisN_4Hh426 [Fistulifera sola... [more]
GAX94729.12.900e-2131.14voltage-dependent anion-selective channel protein,... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000078NSK000078Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03950.1NO06G03950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|125958gene_6727Nannochloropsis oceanica (N. oceanica CCMP1779)gene
VDACgene4138Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03950.1NO06G03950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03950 ID=NO06G03950|Name=NO06G03950|organism=Nannochloropsis oceanica|type=gene|length=3969bp
GCTGTGAATGGGGGAATGGGGGAGAAAATTCGAATAGGTGCAGGTCAGCG
TAGAGATAAATTGAGACCATGCCCATCATCATAAATCACAAACAGCATCA
TTAAGATCATCCACGCGTGCTATATTTTTTTGTGTACAGGCGCGTCTTTA
TCTGGTAACGGGTTTGGACCTGCTCGTGACAGGGGGAAGGGGCGTCAAAG
CGAGACACCGCGCAACCAACCAGGAGAAGTTGGCAACATAGCATATGCTA
CTGCACTCTAAGTTTTCTAAAAAGGCGTTCGTTGAGCTGGTCATTCATTA
TTGTCTATGGTTGGGTTCGTTTAGGGAGAGTGAAATGAACGGGCTTGCAT
TGCTTGCTTTTGCGACAGGGGGTTAAAGCGCTCGCCAACGCCGATCTGTG
AGGTAGACGAGGCGTGCGCGTACTTTCCTTTGGACAGCGCTTCAGAGTAT
GTGAAGCACTATAGCTTTTCACGCTCAAGTATAAGTTGTGCATAGTTTGT
GGGTTCTCTGATGCCTTCCCATTTTTACCTCCCCGTATCCGTGCTTGGGT
GGCCGTTGTTGAAAGCCCAACACTTGACTGCTGTAATTTCTGTTGCGTGG
GGGAGCGTGGCGTCAAGAAAGGGAAGCATACGTCAAAGAGCGTTCGACGG
CATCGTGTGAGTTAAAAGATGAGCCGCCGCGGGCTGGTTAAGGGCCCTTA
CACAGAGATGGATGGCATTCGCACGAGGTGGTGTCAAGTGGCAAGTTGCT
GGCGCCAAAGAAGCAAGCAACCAGGGGGCGTCACCACATTTGCCTGGCAT
GTGAATCTGAGCGTGTCTTTGAGTATAGCACGCCGTACAGCGTGGCTTCC
GACGCAACGGGACAGCTAGTATCATACTCTCCTAGCCATCCCTGGCTCTC
GGGTCCCAACTTTCACACAAACACACAAACACACGCGTACACACACAGAT
CCTCCTTCTACCTCTCCAAGCAACCATGAGCAAAACTACCCCGGCTTTTT
TCAAGGACTTTAACAAGCCAGCTGACAgtaagttcatggtgaacagatgg
agaatgggatggatgtgtgcgtgggagagtgagaggggacaggggaaggc
attttgatcgacatgttttgatcgacatgagcagcaccagcagcatcacc
atgacatgttaggagcagcagggctgcatgcggcagtgatggcacagtgg
caaagttctctcacactattttcacatctttcgcgtccccttttcacagC
CATCCTCAACGATGACTACTCGCTCAAGCGCACGCTCAAGGTCAAGCACG
TCACCCCTGACGGCGTGgtacgtacctctaggattggaggccggtcctcc
ctgctttcctccctctcctctttgtctttgcctccttcgtgctgtatggt
ttttccacgcatctcctgcatgacgtccgcacggggttcacgcagtaaat
aaatagcatgcatatcaaacactccatttctgtcgtcttactccacccat
ccctccctcccatttccttcccttctccttgtctcatgaagACCATCACC
ACCGAGAACGAGCTGGCCGGAAAGGACGGGAAGTACGACCTGAAGGCTAA
GATTTCGGGGAAGTATAAGCACGGTGCCACCGGCTTTTCGGTGGACAAGC
TACAGCTTAAGGAGACGGGCGGCATgtaaggagggagagagggagagagg
gagaaagggagagaaagagagtggactctatggtttgtataaagaaatta
tgattcggggctggacgcctgatgatcacacatgagataattgttcttct
ctttgacgtacctccttccttccctccctccctccctccctccctccctc
cctcacagAGTGGGTGAGTTCGCCCTGGCAGGCGTGGCCCCCGGTCTGAC
CTTCACCTTTAAGGGGGAAGAGAAGCCCACAGGTGAGCTTGGCCTCGAAT
ACACGGGGGCGCGGTTTGCGGTCAAGAGCGAGgtgaggaaaagagggagg
gagggagggaggaaaagaggggaagtgcgagggtacgtcaggttgcggca
tggtgatgtggtgccaacagaccatttccttcctccctttcttcctccct
ccctccctccctccctccccccttccctttatttcagGTGGACCTGGTCC
AATTGAGTAAGCTCAAGGCCTCGGCGGTGCTGGCGCACGAGGGCGGCAAG
gtacgaccttttcctccctccctccctccctccctctcttcccctccatc
accctcttacctaccccctccctccctccctctttagGTGGGTGGTGATG
TGGAGGTGGCCCTGCCGGACGGGAAGAGCGATCTCGGTCTCAACCGTTGG
TCGGTGGGAAGTGCCTATGGCACCTCCACCTCCTTCGCCTCCATTGTCGC
CGCCAGCGgtacgtttcctccctccctccctccctccctccctttgattc
atcgatcatggtttggcctgagagggcaggattccagagatgtggtgaca
gaggtggtggaggtgctgctgctgctgctgctgctccctatcagcaaggc
tcacccctccctccctccctccctccttcccatccacagGCAAGACCGGG
ATGGACTATTCGATCTACGGCGTGGTGAAGACCAGCCCCCCCCTCTCCGT
GGCCGGCAAGCTCACCTACCCCTCGGGCGgtacgtcaggcgggaaggagg
gggggaggggaaagagacgaggaggaagggagcgatcgacagatagaaag
acattcaacgaacttcctccctccatccctccctccatccctccctccct
cctttctatcctccccccctccctcaattccttctttcttccctccctcg
ctgcagGCAACTACGGCGTTACTTTAGGTGGGATTTACAAGTGCTCAGCC
ACCTCCACCCTCAAGGGCAAGATCAACATGAGCGGTCTCCTGTCGACCTC
AATCATCCACgtaaggagagaggggaaggggtgggagggtgagaagaatg
gaatgggattggatgaaggacggtagcccccgaaagcaacaaaccagcaa
tagcacatgaacgcacgcccctcaacccgccttccctccctcccttcctc
cctcagAACGTCCACCCCAAGGTGCAAGTGACGGCCACGGCCGAAGGCTC
CCTCAAGACCATGCAGGACTACAGGATGGGCTTCGGGGCCACGCTCGGGT
AGTTAGGTTGATGTAGGGAAGGAGGGACGGGGGAGAGGGGGTAGGGAAGG
AGGGAAGGACGGAGGGATGGAGGGAGGGGGCAGCAGAAGAATGGCTCGTA
CCTTCTCCTCTTTTCCCTACTCTCTCCTCCTTCTTAATGCTGGAGGTGTT
GGGAGGGTCATGTGAACGAAGGAAGGAGGAAAGCTCATATTTATTGCCCT
TGCTTTTCGGTTCAATCACTATTATAGAGAGATGAATATGGGAAAAAAGC
GATCCCTAAAAAAAACAGAAAAACACCAAAAAAAAATCGAAAGGGATGCG
ATGTTGGGAAAGAAAGAAAGGCTTTGTCATTCTTAATTCTTGGACCATAC
CCGGATGATGATGGCACGAAAGCCACATACATATTATCCACCTCCACTTG
CAGTGGAGGACGGGAGGGAGGGAGGACGACGGTATGTCAGGTCGTTAAGG
TTTTATGGAAGCACTTGTGGCGGTCATGGGAGTGAGTGTTAGCATTGTGG
CAGGCACAAGCCAGAGAAGACGAAGAGGGAAAGGAGAAGTAAGGATGAAG
AAGAAAGTTTCTCGGGAAAAGTGGGAGAGAGAGGTTTTCGTGAAGCATAA
TCAGGAGGAGCATAAGGATGAGGAGGAGAAAAAGGAAGAGGAGGAATAGA
TGGGGAAAAAAGATGAGGAGATAAACGCAGCAAAGAAAATAAGAAACGAA
AACAACGAAGACAAGAAATCAACTTTTTGGATCGATTTGCGTAAATCGTG
AAGATTACGATTCTCAGCA
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protein sequence of NO06G03950.1

>NO06G03950.1-protein ID=NO06G03950.1-protein|Name=NO06G03950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bp
MSKTTPAFFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVTITTENELAG
KDGKYDLKAKISGKYKHGATGFSVDKLQLKETGGIVGEFALAGVAPGLTF
TFKGEEKPTGELGLEYTGARFAVKSEVDLVQLSKLKASAVLAHEGGKVGG
DVEVALPDGKSDLGLNRWSVGSAYGTSTSFASIVAASGKTGMDYSIYGVV
KTSPPLSVAGKLTYPSGGNYGVTLGGIYKCSATSTLKGKINMSGLLSTSI
IHNVHPKVQVTATAEGSLKTMQDYRMGFGATLG*
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Synonyms
Publications