NO06G03720, NO06G03720 (gene) Nannochloropsis oceanica

Overview
NameNO06G03720
Unique NameNO06G03720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1008
Alignment locationchr6:1029199..1030206 +

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Properties
Property NameValue
DescriptionPrip interacting pimt
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1029199..1030206 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0001510RNA methylation
GO:00094527-methylguanosine RNA capping
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR019012RNA_cap_Gua-N2-MeTrfase
Homology
BLAST of NO06G03720 vs. NCBI_GenBank
Match: EWM26365.1 (prip interacting pimt [Nannochloropsis gaditana])

HSP 1 Score: 405.6 bits (1041), Expect = 1.500e-109
Identity = 214/263 (81.37%), Postives = 232/263 (88.21%), Query Frame = 0
Query:   73 SRIIYGKEVPSENDEIQYKWGAIFYNYSPAQRALLALDEVSMYSITDTRSANNTSRILQQLVGDRAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILDTTGKVHPPFQRREKGGRGGGXXXXXXXXXXXXXXXXXXGNQAPWTLKRKTT 336
            SRIIYGK+VPSENDEIQYKWGAIFYNY+P QRALLALDEVSMYSITDTRSANNTSRILQQLVG+RAV+TDGCAAAGGNVLSFAQHFR+VQAVELDPQRFSLLEHNVKALGL DTVTT++GDFLEK+  L+QDVVFLDPPWGGKSY ENDMVDL+FG +PL++LCERLKPHA YIALKLPLNFN EG    +TSSVVRAD RCARKQLLVILDTTGK+H       +GGRGG       XXXXXXXXXXXX    PW+LKRK+T
Sbjct:   98 SRIIYGKDVPSENDEIQYKWGAIFYNYTPDQRALLALDEVSMYSITDTRSANNTSRILQQLVGERAVVTDGCAAAGGNVLSFAQHFRRVQAVELDPQRFSLLEHNVKALGLEDTVTTFKGDFLEKMHSLQQDVVFLDPPWGGKSYVENDMVDLSFGGVPLAELCERLKPHAHYIALKLPLNFNLEGLTAHVTSSVVRADSRCARKQLLVILDTTGKIH---SNLREGGRGG------RXXXXXXXXXXXXXXDRPWSLKRKST 351          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: CCI46782.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 148.3 bits (373), Expect = 4.300e-32
Identity = 78/209 (37.32%), Postives = 120/209 (57.42%), Query Frame = 0
Query:   86 DEIQYKWGAIFYNYSPAQRALLALDEVSMYSIT-DTRSANNTSRILQQLVGD---------RAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILD 285
            D+  Y +G+I Y     QR  L +DEV+MYS+T DT +   T  I ++L  +          A ITD  A  GGNV SF++ F  V AVE DP R  +L HN+  L     VT +  ++LE +  L+QDVVF+DPPWGG+ Y E + +DL   D+PL  +C++L+ H   + +K P+NF+    R  + S  ++  D+  +K +++++D
Sbjct:  142 DKRDYFFGSIPYR----QRQCLQMDEVAMYSVTRDTVAIEITRLITEELYSNVPVDSNGRLMATITDATACVGGNVWSFSETFAYVHAVECDPTRHGMLCHNLGILRCDHNVTCWNRNYLELMSTLQQDVVFIDPPWGGQQYREVEKLDLYLDDIPLCVICDQLRWHTKLVFVKAPINFDLVKLRMFVQSGTIKVFDQVDKKMMIIMID 346          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: OQS01699.1 (hypothetical protein ACHHYP_00304 [Achlya hypogyna])

HSP 1 Score: 148.3 bits (373), Expect = 4.300e-32
Identity = 75/192 (39.06%), Postives = 109/192 (56.77%), Query Frame = 0
Query:   95 IFYNYSPAQRALLALDEVSMYSITDTRSANNTSRILQQLVG--DRAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILD 285
            +F    PA R+ L LD+V+ YS+TD ++A   S  +  L G    +VITD  A  GGN  SF   FR VQAVE+DP RF +L HN+  +     +  Y  ++++   +  QDVVF+DPPWGG  Y +   VDL  GD  L++LCE+L     Y+ +K+P NF+ E F   ++ +V        RK  +V++D
Sbjct:  151 LFGGLPPAVRSQLQLDDVAQYSVTDMKTAARISHFIMSLPGLTPNSVITDATACVGGNTASFCTFFRYVQAVEIDPTRFQMLVHNMHGVLTFVNIQCYCANYVDVATQFLQDVVFIDPPWGGPEYRQRSTVDLFLGDTGLAELCEQLVHRTQYVVIKVPQNFDIERFTYLVSGTVSYITH--FRKMAMVVVD 340          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: XP_008609827.1 (hypothetical protein SDRG_05863 [Saprolegnia diclina VS20] >EQC36406.1 hypothetical protein SDRG_05863 [Saprolegnia diclina VS20])

HSP 1 Score: 147.9 bits (372), Expect = 5.600e-32
Identity = 76/192 (39.58%), Postives = 107/192 (55.73%), Query Frame = 0
Query:   95 IFYNYSPAQRALLALDEVSMYSITDTRSANNTSRILQQLVG--DRAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILD 285
            +F     A R+ L LD+V+ YS+TD ++A   S  +  L G    +VITD  A  GGN  SF   FR VQAVE+DP RF +L HN+  +     +  Y   +++  ++  QDVVF+DPPWGG  Y     VDL  G+ PL+ LCERL     Y+ +K+P NF+ E F   ++ +V        RK  +V+LD
Sbjct:  161 LFSGLPVAVRSQLQLDDVAQYSVTDMKTAARISHFIMTLPGLTPNSVITDATACVGGNTASFCTFFRYVQAVEIDPTRFRMLVHNMHGVLTFVNIQCYCASYVDVAEQFLQDVVFIDPPWGGPEYRSRSTVDLHLGETPLADLCERLVGRTQYVVIKVPQNFDIERFTYRVSGTVSYITH--FRKMAMVVLD 350          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: CCA16623.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 146.0 bits (367), Expect = 2.100e-31
Identity = 78/209 (37.32%), Postives = 119/209 (56.94%), Query Frame = 0
Query:   86 DEIQYKWGAIFYNYSPAQRALLALDEVSMYSIT-DTRSANNTSRILQQLVGD---------RAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILD 285
            D+  Y +G+I +     QR  L LDEV+MYS+T DT +   T  I ++L  +          A ITD  A  GGNV SF+  F  V AVE D  R+ +L HN+  L     VT +  ++LE +  L QDVVF+DPPWGG+ Y E + +DL   D+PL  +C++L+ HA  + +K P NF+ E  ++ + S  ++  D   +K +++++D
Sbjct:  137 DKRDYFFGSIPFQ----QRQCLQLDEVAMYSVTKDTVATEITRLITEELCSNVPIDSNGRLMATITDATACVGGNVWSFSDKFAHVHAVECDTTRYGMLCHNLTILRSDHNVTCWNENYLELMWSLHQDVVFIDPPWGGQQYREIEKLDLYLVDIPLCVICDQLRWHAKLVFVKAPTNFDLEKLKKFVQSGTIKVFDHLHKKMIIIMID 341          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: XP_012210029.1 (hypothetical protein SPRG_15036 [Saprolegnia parasitica CBS 223.65] >KDO19255.1 hypothetical protein SPRG_15036 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 146.0 bits (367), Expect = 2.100e-31
Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 0
Query:   95 IFYNYSPAQRALLALDEVSMYSITDTRSANNTSRILQQLVG--DRAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILD 285
            +F     A R+ L LD+V+ YS+TD ++A   S  +  L G    +VITD  A  GGN  SF   FR VQAVE+DP RF +L HN+  +     +  Y  ++++  ++  QDVVF+DPPWGG  Y     VDL  G+ PL+ LCERL     Y+ +K+P NF+ E F   ++ +V        RK  +V++D
Sbjct:  167 LFSGLPVAVRSQLQLDDVAQYSVTDMKTAARISHFIMTLPGLTPNSVITDATACVGGNTASFCTFFRYVQAVEIDPTRFRMLVHNMHGVLTFVNIQCYCANYVDVAQQFLQDVVFIDPPWGGPEYRTRSTVDLHLGETPLADLCERLVGRTQYVVIKVPQNFDIERFTFRVSGTVSYITH--FRKMAMVVVD 356          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: XP_012209310.1 (hypothetical protein SPRG_14587 [Saprolegnia parasitica CBS 223.65] >KDO20007.1 hypothetical protein SPRG_14587 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 146.0 bits (367), Expect = 2.100e-31
Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 0
Query:   95 IFYNYSPAQRALLALDEVSMYSITDTRSANNTSRILQQLVG--DRAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILD 285
            +F     A R+ L LD+V+ YS+TD ++A   S  +  L G    +VITD  A  GGN  SF   FR VQAVE+DP RF +L HN+  +     +  Y  ++++  ++  QDVVF+DPPWGG  Y     VDL  G+ PL+ LCERL     Y+ +K+P NF+ E F   ++ +V        RK  +V++D
Sbjct:  168 LFSGLPVAVRSQLQLDDVAQYSVTDMKTAARISHFIMTLPGLTPNSVITDATACVGGNTASFCTFFRYVQAVEIDPTRFRMLVHNMHGVLTFVNIQCYCANYVDVAQQFLQDVVFIDPPWGGPEYRTRSTVDLHLGETPLADLCERLVGRTQYVVIKVPQNFDIERFTFRVSGTVSYITH--FRKMAMVVVD 357          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: XP_009832783.1 (hypothetical protein H257_08563 [Aphanomyces astaci] >ETV77673.1 hypothetical protein H257_08563 [Aphanomyces astaci])

HSP 1 Score: 140.6 bits (353), Expect = 9.000e-30
Identity = 76/208 (36.54%), Postives = 113/208 (54.33%), Query Frame = 0
Query:   79 KEVPSENDEIQYKWGAIFYNYSPAQRALLALDEVSMYSITDTRSANNTSRILQQLVG--DRAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILD 285
            K     ND+  + +G +    +P  R  L LD+V+ YS+TD ++A   S  L  L G    +V+TD  A  GGN  SF   FR VQAVE+D  RF +L HN+ A+        +  ++++ ++   QDVVF+DPPWGG  Y     VDL  GD PL+ +CERL     Y+ +K+P NF+ +   + ++ +V        RK  LV++D
Sbjct:  181 KTTNDPNDKRDFLFGGL----APELRVQLQLDDVAQYSVTDMKTAARISHFLMTLPGLSPDSVVTDATACVGGNTASFCTFFRYVQAVEIDATRFQMLVHNLHAVMSYVNAQCFCANYVDVVECFGQDVVFVDPPWGGPEYRSRSTVDLFLGDTPLADVCERLVGRTQYVVIKVPENFDLDKLTRHVSGTVGYV--ASFRKMGLVVVD 382          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: OQS07084.1 (hypothetical protein THRCLA_00909 [Thraustotheca clavata])

HSP 1 Score: 139.8 bits (351), Expect = 1.500e-29
Identity = 78/209 (37.32%), Postives = 111/209 (53.11%), Query Frame = 0
Query:   85 NDEIQYKWGAIFYNYSPAQRALLALDEVSMYSITDTRSANNTSRILQQLVG--DRAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILDTTGKVHP 292
            ND +  K   +F       R  L LDEV+ YS+TD ++A   S  +  L G    +VITD  A  GGN  SF   FR VQAVE+D  RF +L HN+ ++     +  Y  ++++  ++  QDVVF+DPPWGG  Y     VDL  GD  L+++CE L     Y+ +K+P NF+ E F   ++  V        RK  +V++D    VHP
Sbjct:  140 NDPVD-KRSFLFSGLPSNVREQLQLDEVAQYSVTDMKTAARISHFIMTLPGLTPNSVITDATACVGGNTASFCTFFRYVQAVEIDATRFRMLVHNMHSVLSFVNLQCYCANYVQVAQQFLQDVVFIDPPWGGPEYRSRSTVDLNLGDASLAEVCELLVGRTQYVVIKVPQNFDIERFTHRVSGVVSYITH--FRKMAMVVVDYR-YVHP 344          
BLAST of NO06G03720 vs. NCBI_GenBank
Match: XP_008871954.1 (hypothetical protein H310_08102 [Aphanomyces invadans] >ETV99398.1 hypothetical protein H310_08102 [Aphanomyces invadans])

HSP 1 Score: 139.4 bits (350), Expect = 2.000e-29
Identity = 75/208 (36.06%), Postives = 112/208 (53.85%), Query Frame = 0
Query:   79 KEVPSENDEIQYKWGAIFYNYSPAQRALLALDEVSMYSITDTRSANNTSRILQQLVG--DRAVITDGCAAAGGNVLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKELKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKLPLNFNFEGFRQAITSSVVRADDRCARKQLLVILD 285
            K     ND+  + +G +     P  R  + LD+V+ YS+TD ++A   S  +  L G    +++TD  A  GGN  SF   FR VQAVE+D  RF +L HN+ A+     V  Y  ++++ ++   QDVVF+DPPWGG  Y     VDL  G+ PL+ +CERL     Y+ +K+P NF+ + F   ++  V        RK  LV++D
Sbjct:  153 KTTNDPNDKRDFLFGGL----PPELRIQMQLDDVAQYSVTDMKTAARISHFISALPGLSPDSIVTDSTACVGGNTASFCTFFRYVQAVEIDATRFQMLVHNLHAVMSLVNVQCYCANYVDVVECFSQDVVFVDPPWGGPEYRSRCTVDLFLGNTPLADVCERLVGRTQYVVVKVPENFDLDKFTANVSGVVGYISS--FRKMGLVVVD 354          
The following BLAST results are available for this feature:
BLAST of NO06G03720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26365.11.500e-10981.37prip interacting pimt [Nannochloropsis gaditana][more]
CCI46782.14.300e-3237.32unnamed protein product [Albugo candida][more]
OQS01699.14.300e-3239.06hypothetical protein ACHHYP_00304 [Achlya hypogyna... [more]
XP_008609827.15.600e-3239.58hypothetical protein SDRG_05863 [Saprolegnia dicli... [more]
CCA16623.12.100e-3137.32conserved hypothetical protein [Albugo laibachii N... [more]
XP_012210029.12.100e-3139.06hypothetical protein SPRG_15036 [Saprolegnia paras... [more]
XP_012209310.12.100e-3139.06hypothetical protein SPRG_14587 [Saprolegnia paras... [more]
XP_009832783.19.000e-3036.54hypothetical protein H257_08563 [Aphanomyces astac... [more]
OQS07084.11.500e-2937.32hypothetical protein THRCLA_00909 [Thraustotheca c... [more]
XP_008871954.12.000e-2936.06hypothetical protein H310_08102 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000105NSK000105Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03720.1NO06G03720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558293gene_6701Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100031g18gene4159Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03720.1NO06G03720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03720 ID=NO06G03720|Name=NO06G03720|organism=Nannochloropsis oceanica|type=gene|length=1008bp
ATGGAGAAGGAAAAAGAGGACGGCTACAACACGCAGACAGCACAAGCGCA
AGCCCCAGCATCATCATCGTCATCCTCCTTCTCCGCCTCCCCCTCGTCCT
CCTCAACGAACAAAGCTGCCGCTGCCAGCGAGGCACCCACACCACCACCA
GGCCAATCTAACGATGACGCCCGCGCGACTTCCCAGGCTGCTGCTGTCGA
TACCTCTACCTCGGTGTCCCGCATCATTTATGGCAAGGAAGTGCCCAGCG
AAAACGACGAGATCCAGTACAAATGGGGGGCCATCTTCTACAACTATTCC
CCGGCCCAACGCGCCCTACTGGCCTTGGATGAGGTCTCCATGTACAGCAT
CACGGACACGCGCTCAGCCAACAACACTTCGCGGATTTTGCAGCAACTTG
TGGGGGACCGAGCCGTGATCACTGATGGCTGCGCTGCTGCGGGCGGGAAC
GTCCTGTCGTTTGCGCAGCATTTCCGCCAGGTCCAAGCCGTGGAGCTCGA
CCCGCAGCGGTTCAGCCTATTAGAACACAATGTGAAGGCCTTGGGATTAA
CTGATACTGTCACGACGTATCGCGGTGATTTTCTGGAGAAGTTAAAGGAG
TTGAAACAAGATGTAGTGTTCCTCGATCCGCCCTGGGGAGGAAAGTCGTA
CGCTGAGAATGACATGGTAGATTTGACCTTCGGGGACCTTCCTTTATCTC
AGCTCTGTGAGCGTCTCAAGCCCCATGCACTATACATCGCGTTGAAACTT
CCGTTGAATTTCAATTTTGAAGGGTTCAGGCAGGCGATTACTTCGTCGGT
GGTAAGGGCGGATGATCGATGCGCACGGAAACAGCTCCTGGTTATCTTGG
ACACGACGGGGAAAGTCCACCCACCGTTTCAGAGGCGAGAAAAAGGAGGA
AGAGGAGGAGGGGAAGGAAGAGGAGGACAGGGGAATGGACGGGGAGGGTA
TAAGCGGGAGAGAGATGGTAATCAGGCGCCTTGGACATTGAAACGCAAGA
CAACGTAA
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protein sequence of NO06G03720.1

>NO06G03720.1-protein ID=NO06G03720.1-protein|Name=NO06G03720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MEKEKEDGYNTQTAQAQAPASSSSSSFSASPSSSSTNKAAAASEAPTPPP
GQSNDDARATSQAAAVDTSTSVSRIIYGKEVPSENDEIQYKWGAIFYNYS
PAQRALLALDEVSMYSITDTRSANNTSRILQQLVGDRAVITDGCAAAGGN
VLSFAQHFRQVQAVELDPQRFSLLEHNVKALGLTDTVTTYRGDFLEKLKE
LKQDVVFLDPPWGGKSYAENDMVDLTFGDLPLSQLCERLKPHALYIALKL
PLNFNFEGFRQAITSSVVRADDRCARKQLLVILDTTGKVHPPFQRREKGG
RGGGEGRGGQGNGRGGYKRERDGNQAPWTLKRKTT*
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Synonyms
Publications