NO06G03570, NO06G03570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_091939048.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Propionivibrio dicarboxylicus]) HSP 1 Score: 137.9 bits (346), Expect = 5.900e-29 Identity = 85/210 (40.48%), Postives = 115/210 (54.76%), Query Frame = 0 Query: 115 ACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLP--FALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALR 323 A PL+AVLRG+ + + L EG +I +P SP E + +K LP +GA TV++P+QV A G + PH+D ++ AK GLL +PG+ TP+EAF AL GA LKLFP++ P +V SI VLP L+ GG+ +M YI GA+ F LGS L+KPG++ EL +RAR FV ALR Sbjct: 23 ALPLIAVLRGIRPAEAATLGKVLYDEGFRLIEVPLNSPEPFESIAQI--------------RKALPADAVVGAGTVLAPEQVVSLKACGGDIVFMPHSDLEVVRAAKRGGLLCVPGVATPTEAFAALAAGADALKLFPAEMIVPKIVKSIGVVLPKGTCLVPFGGITPDNMGPYIEAGASAFGLGSALYKPGMRADELGDRARAFVAALR 218
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_095525947.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Candidatus Dactylopiibacterium carminicum] >PAS91414.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Candidatus Dactylopiibacterium carminicum]) HSP 1 Score: 137.9 bits (346), Expect = 5.900e-29 Identity = 91/211 (43.13%), Postives = 113/211 (53.55%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFAL-GAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALR 323 + + PLVA+LRG+ D TL + G +I +P SP + Q L P L GA+TV+S QV A GA + PHTDPV++A AKA GL+ LPG TPSEAF AL GA LKLFP++ A P V ++ AVLP AR+L GGV + + A G GF LGS L+ G EL ERAR FV A R Sbjct: 13 MQSLPLVAILRGLPPEDAEAAAQTLLEAGFRLIEVPLNSPDPFTSIATM-------------RQVLPPEVLVGASTVMSAAQVRQLADIGADLMVTPHTDPVLIAAAKAAGLVSLPGFFTPSEAFAALAAGATALKLFPAEQAGPATVKALRAVLPASARVLPVGGVSPETLATWRAAGVAGFGLGSALYGKGTTVAELGERARRFVAAWR 210
BLAST of NO06G03570 vs. NCBI_GenBank
Match: PAS95647.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Candidatus Dactylopiibacterium carminicum]) HSP 1 Score: 137.9 bits (346), Expect = 5.900e-29 Identity = 91/211 (43.13%), Postives = 113/211 (53.55%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFAL-GAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALR 323 + + PLVA+LRG+ D TL + G +I +P SP + Q L P L GA+TV+S QV A GA + PHTDPV++A AKA GL+ LPG TPSEAF AL GA LKLFP++ A P V ++ AVLP AR+L GGV + + A G GF LGS L+ G EL ERAR FV A R Sbjct: 8 MQSLPLVAILRGLPPEDAEAAAQTLLEAGFRLIEVPLNSPDPFTSIATM-------------RQVLPPEVLVGASTVMSAAQVRQLADIGADLMVTPHTDPVLIAAAKAAGLVSLPGFFTPSEAFAALAAGATALKLFPAEQAGPATVKALRAVLPASARVLPVGGVSPETLATWRAAGVAGFGLGSALYGKGTTVAELGERARRFVAAWR 205
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_027298628.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Rhodospirillales bacterium URHD0088]) HSP 1 Score: 137.5 bits (345), Expect = 7.700e-29 Identity = 85/210 (40.48%), Postives = 115/210 (54.76%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALR 323 L CPLVA+LRGV ++ + L + G ++I +P SP + +R E+ L +GA TVI V A AG + PH DP I+ RAKA GL+VLPG TP+EAF AL GA LKLFP++ PP ++ ++ AVLPP +L GG+ M AY GA GF LGS L+ PG+ + ERA+ FV ++ Sbjct: 8 LQRCPLVAILRGVRPDEVDSIGAVLVECGFSIIEVPLNSPEPIASIRRLADRFG--------ERAL----IGAGTVIEGRDVADIAGAGGRLVVMPHGDPAIIRRAKAAGLIVLPGFATPTEAFAALAAGADGLKLFPAEGNPPAVLKAMKAVLPPSIPVLPVGGITPEKMAAYWQAGARGFGLGSALYAPGMTADSVRERAQAFVAEIK 205
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_066700847.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Sphingobium amiense]) HSP 1 Score: 137.5 bits (345), Expect = 7.700e-29 Identity = 84/207 (40.58%), Postives = 115/207 (55.56%), Query Frame = 0 Query: 115 ACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTAL 322 ACPLVA+LRGVA ++ V L G+ +I IP SP LE + +GA TV++ V AAAG I P++DP ++ + GL+ LPG TPSEAF AL GA LKLFP++AA P ++ +I AVLP +L GG++ M ++A GA+GF LGS+L++PG E+ +AR FVT L Sbjct: 13 ACPLVAILRGVAPEEVESVGEALVGAGIGLIEIPLNSPRPLESIERLAGALRGRA------------LVGAGTVLTLGNVRDVAAAGGQIIVSPNSDPAVIGATREAGLISLPGFSTPSEAFAALGAGATALKLFPAEAASPKILGAIRAVLPREVAVLPVGGIEVDSMAPWLAAGASGFGLGSSLYRPGRSAEEVGAKARTFVTTL 207
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_095530257.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Candidatus Dactylopiibacterium carminicum] >PAS92745.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Candidatus Dactylopiibacterium carminicum]) HSP 1 Score: 137.5 bits (345), Expect = 7.700e-29 Identity = 91/211 (43.13%), Postives = 112/211 (53.08%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFAL-GAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALR 323 + + PLVA+LRG+ D TL + G +I +P SP + Q L P L GA TV+S QV A GA + PHTDPV++A AKA GL+ LPG TPSEAF AL GA LKLFP++ A P V ++ AVLP AR+L GGV + + A G GF LGS L+ G EL ERAR FV A R Sbjct: 13 MQSLPLVAILRGLPPEDAEAAAQTLLEAGFRLIEVPLNSPDPFTSIATM-------------RQVLPPEVLVGAGTVMSAAQVRQLADIGADLMVTPHTDPVLIAAAKAAGLVSLPGFFTPSEAFAALAAGATALKLFPAEQAGPATVKALRAVLPASARVLPVGGVSPETLATWRAAGVAGFGLGSALYGKGTTVAELGERARRFVAAWR 210
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_108094075.1 (MULTISPECIES: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas] >PTQ73651.1 2-keto-3-deoxy-phosphogalactonate aldolase [Pseudomonas sp. GV071] >PTW40944.1 2-keto-3-deoxy-phosphogalactonate aldolase [Pseudomonas sp. GV054]) HSP 1 Score: 137.5 bits (345), Expect = 7.700e-29 Identity = 86/203 (42.36%), Postives = 110/203 (54.19%), Query Frame = 0 Query: 118 LVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTA 321 L+A+LRGV + + L G +I +P SP +R P L +GA TV+S QV AAG I PH+DP +L AKA GL + PG+ TP+EAF AL GA VLKLFP++ P +V + AVLPP LL GG+ A +MPAY A G GF LGS LFKPG+ ++AE A +V A Sbjct: 11 LIAILRGVQPGEALAIGEVLYGAGFRVIEVPLNSPEPYASIR--------LLRDSLPADCL----VGAGTVLSAQQVQAVHAAGGQVIVMPHSDPQVLRAAKAAGLYLAPGVATPTEAFAALAEGADVLKLFPAEQMSPALVKAWLAVLPPGTVLLPVGGISADNMPAYFAAGVKGFGLGSGLFKPGMSAAQVAENAAAYVAA 201
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_030137730.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas fluorescens]) HSP 1 Score: 136.7 bits (343), Expect = 1.300e-28 Identity = 82/205 (40.00%), Postives = 114/205 (55.61%), Query Frame = 0 Query: 118 LVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLP--FALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTA 321 L+A+LRG+ + + L G +I +P SP E +R + LP +GA TV++P+QV+ AAG I PH+DP +L AKA GL + PG+ TP+EAF AL GAHVLK+FP++ P +V + AVLP L+ GG+ +M ++ G GF LGS LFKPGL E+AERA+ +V A Sbjct: 11 LIAILRGLRPEEAASIGEVLYAAGFRVIEVPLNSPEPYESIRIL--------------RSTLPADCLIGAGTVLTPEQVEQVKAAGGQVIVMPHSDPKVLRAAKAAGLYLSPGVATPTEAFAALAEGAHVLKMFPAEQMGPAVVKAWLAVLPAGTVLVPVGGITPDNMAVFVEAGVKGFGLGSGLFKPGLTADEVAERAKAYVAA 201
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_024776884.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas corrugata] >AOE61521.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas corrugata] >SDU86723.1 2-keto-3-deoxy-phosphogalactonate aldolase [Pseudomonas corrugata]) HSP 1 Score: 136.3 bits (342), Expect = 1.700e-28 Identity = 83/205 (40.49%), Postives = 114/205 (55.61%), Query Frame = 0 Query: 118 LVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLP--FALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTA 321 L+A+LRG+ + + L G +I +P SP E +R + LP +GA TV++P+QV+L AAG I PH+DP +L AKA GL + PG+ TP+EAF AL GAHVLKLFP++ P +V + AVLP L+ GG+ +M ++ G GF LGS LFKPGL E+A RA+ +V A Sbjct: 11 LIAILRGLRPEEAAAIGEVLYSAGFRVIEVPLNSPEPYESIRIL--------------RNTLPADCLIGAGTVLTPEQVELVKAAGGQVIVMPHSDPNVLRAAKAAGLYLSPGVATPTEAFAALAEGAHVLKLFPAEQMGPAVVKAWLAVLPAGTVLVPVGGITPDNMAVFLEAGVKGFGLGSGLFKPGLTADEVAVRAKAYVAA 201
BLAST of NO06G03570 vs. NCBI_GenBank
Match: WP_024905349.1 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Robbsia andropogonis]) HSP 1 Score: 136.3 bits (342), Expect = 1.700e-28 Identity = 82/213 (38.50%), Postives = 118/213 (55.40%), Query Frame = 0 Query: 113 LDACPLVAVLRGVAAVDLPKVVMTLRQEGLTMISIPAESPAGLEGLRXXXXXXXXXXXXXXPEQKLLPFALGAATVISPDQVDLAAAAGASFISCPHTDPVILARAKAHGLLVLPGILTPSEAFLALNHGAHVLKLFPSQAAPPGMVASIAAVLPPPARLLVSGGVQAVDMPAYIAGGATGFALGSTLFKPGLKEGELAERARVFVTALRVGQ 326 + AC +VA+LRGV ++ + +L + G +I +P SP L + PE+ + +GA TV+SP V A AG I PH+D ++ A+ GL V PG+ TP+EAF AL GAHVLK+FP++ P +V + AV+P LL GG+ +M +++ GA GF LGS L+KPGL E+ +RA F+TA R Q Sbjct: 6 MQACGMVAILRGVRPDEVVDIGQSLYEAGFRIIEVPLNSPEPLRSI--------TALRQALPEEVM----VGAGTVLSPADVAKIAQAGGQIIVMPHSDTAVIRAARDAGLAVAPGVATPTEAFAALAAGAHVLKMFPAELLGPAVVKAWRAVIPKSVPLLPVGGITPDNMTSFLEAGAQGFGLGSALYKPGLDAAEVGQRAHRFMTAWRTTQ 206 The following BLAST results are available for this feature:
BLAST of NO06G03570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03570 ID=NO06G03570|Name=NO06G03570|organism=Nannochloropsis oceanica|type=gene|length=1014bpback to top protein sequence of NO06G03570.1 >NO06G03570.1-protein ID=NO06G03570.1-protein|Name=NO06G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bpback to top Synonyms
Publications
|