NO06G03310, NO06G03310 (gene) Nannochloropsis oceanica

Overview
NameNO06G03310
Unique NameNO06G03310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2154
Alignment locationchr6:917788..919941 +

Link to JBrowse

Properties
Property NameValue
DescriptionSplicing factor U2AF 35 kDa subunit
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:917788..919941 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
GO:0003723RNA binding
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0089701U2AF
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR000571Znf_CCCH
IPR009145U2_small
Homology
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: XP_005854346.1 (splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis gaditana CCMP526] >EKU22012.1 splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 391.3 bits (1004), Expect = 3.100e-105
Identity = 179/198 (90.40%), Postives = 191/198 (96.46%), Query Frame = 0 
Query:   61 LGNAKGGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLEDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            LGN+KGGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLL+HMYKNP+SALFTAPARGERAAPQGA+D TNQ GL+DFEDFFEEVYEELAKFG +EGMHVCDNLGEHMIGNVYAK++DEEEADEARQ LNGR+YAG+ L+VEFSPVTDFREARCRQYDEGQC+YGPYCNFLHVKTI R LRRDL
Sbjct:   60 LGNSKGGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLKHMYKNPASALFTAPARGERAAPQGANDATNQAGLDDFEDFFEEVYEELAKFGEVEGMHVCDNLGEHMIGNVYAKYADEEEADEARQALNGRFYAGRVLEVEFSPVTDFREARCRQYDEGQCTYGPYCNFLHVKTISRALRRDL 257
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: EWM26330.1 (u2 small nuclear auxiliary small [Nannochloropsis gaditana])

HSP 1 Score: 391.3 bits (1004), Expect = 3.100e-105
Identity = 179/198 (90.40%), Postives = 191/198 (96.46%), Query Frame = 0 
Query:   61 LGNAKGGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLEDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            LGN+KGGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLL+HMYKNP+SALFTAPARGERAAPQGA+D TNQ GL+DFEDFFEEVYEELAKFG +EGMHVCDNLGEHMIGNVYAK++DEEEADEARQ LNGR+YAG+ L+VEFSPVTDFREARCRQYDEGQC+YGPYCNFLHVKTI R LRRDL
Sbjct:   60 LGNSKGGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLKHMYKNPASALFTAPARGERAAPQGANDATNQAGLDDFEDFFEEVYEELAKFGEVEGMHVCDNLGEHMIGNVYAKYADEEEADEARQALNGRFYAGRVLEVEFSPVTDFREARCRQYDEGQCTYGPYCNFLHVKTISRALRRDL 257
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: CCA15308.1 (splicing factor U2AF 35 kDa subunit putative [Albugo laibachii Nc14])

HSP 1 Score: 269.2 bits (687), Expect = 1.800e-68
Identity = 122/193 (63.21%), Postives = 150/193 (77.72%), Query Frame = 0 
Query:   66 GGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLEDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            GGAEHLARIHGTEED+VNCPFYFKIGACRHG+RCSR HNKP FSQT+L+ HMY+NP S +       +   P G   K      EDFEDF+EEV+EEL KFG +E +++CDNLG+H++GNVY K+ DEE A  A++ L GR+YAG+ L  EFSPVTDFREARCRQ+DEG C+ G YCNF+HVKT+ R ++R+L
Sbjct:   49 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQII-----AQNGDPSGLDQKKVD---EDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHVKTVSRSMQREL 233
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: CCI44589.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 267.3 bits (682), Expect = 6.700e-68
Identity = 122/194 (62.89%), Postives = 152/194 (78.35%), Query Frame = 0 
Query:   66 GGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGL-EDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            GGAEHLARIHGTEED+VNCPFYFKIGACRHG+RCSR HNKP FSQT+L+ HMY+NP S +          A  G     +Q+ + EDFEDF+EEV+EEL KFG +E +++CDNLG+H++GNVY K+ DEE A  A++ L GR+YAG+ L  EFSPVTDFREARCRQ+DEG C+ G YCNF+HVKT+ R ++R+L
Sbjct:   49 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQII---------AQNGDPSALDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHVKTVSRSMQREL 233
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: XP_009034974.1 (hypothetical protein AURANDRAFT_14519, partial [Aureococcus anophagefferens] >EGB10148.1 hypothetical protein AURANDRAFT_14519, partial [Aureococcus anophagefferens])

HSP 1 Score: 266.5 bits (680), Expect = 1.100e-67
Identity = 119/191 (62.30%), Postives = 151/191 (79.06%), Query Frame = 0 
Query:   68 AEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLEDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            A HLARIHGTEEDKVNCPFYFKIGACRHG+RCSR+H+KPPFSQT++++HMY+NP+S +  A     +  P+           E+F+DF+EEVY+ELAK+G +E ++VC+NLG+HM+GNVYAKF+DEE  D + + L GR+YAG+ L  EFSPVTDFREARCRQYDE  C+ G YCNF+H++T  R LRRDL
Sbjct:    1 ATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAAAGGDPSQLDPKKVQ--------EEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEHTDASLKALFGRFYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLRRDL 183
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: XP_009825980.1 (hypothetical protein H257_03540 [Aphanomyces astaci] >ETV84288.1 hypothetical protein H257_03540 [Aphanomyces astaci])

HSP 1 Score: 264.6 bits (675), Expect = 4.300e-67
Identity = 123/193 (63.73%), Postives = 147/193 (76.17%), Query Frame = 0 
Query:   66 GGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLEDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            GGAEHLARIHGTEED+VNCPFYFKIGACRHG+RCSR HNKP FSQTLL++HMY+NP S +  A        P     KT     EDFEDFFEEV+EEL KFG +E ++VCDNLG+H++GNVYAKF DEE A  A + L GR+Y G+ L  E+SPVTDFREARCRQ+DEG C+ G YCNF+H+K + R +  +L
Sbjct:   45 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRSHNKPVFSQTLLVKHMYQNPLSTVIAA-----NGDPNQLDQKTVD---EDFEDFFEEVFEELCKFGKVEELNVCDNLGDHLVGNVYAKFEDEECAAAAHKVLYGRFYGGRPLMCEYSPVTDFREARCRQFDEGTCNRGGYCNFMHIKMVSRAMMFEL 229
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: XP_008608040.1 (hypothetical protein SDRG_04157 [Saprolegnia diclina VS20] >EQC38448.1 hypothetical protein SDRG_04157 [Saprolegnia diclina VS20])

HSP 1 Score: 263.5 bits (672), Expect = 9.600e-67
Identity = 122/193 (63.21%), Postives = 147/193 (76.17%), Query Frame = 0 
Query:   66 GGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLEDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            GGAEHLARIHGTEED+VNCPFYFKIGACRHG+RCSR HNKP FSQT+L++HMY+NP S +  A        P     KT     EDFEDFFEEVYEEL KFG ++ ++VCDNLG+H++GNVYAKF DEE A  A++ L GR+Y G+ L  EFSPVTDFREARCRQ+DEG C+ G YCNF+H+K +   +  +L
Sbjct:   51 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVKHMYQNPLSVIIAA-----NGDPSQLDQKTVD---EDFEDFFEEVYEELCKFGKVDELNVCDNLGDHLVGNVYAKFDDEECAAAAQKALYGRFYGGRPLICEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKMVSHAMMIEL 235
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: XP_012202050.1 (hypothetical protein SPRG_07523 [Saprolegnia parasitica CBS 223.65] >KDO27275.1 hypothetical protein SPRG_07523 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 263.5 bits (672), Expect = 9.600e-67
Identity = 122/193 (63.21%), Postives = 147/193 (76.17%), Query Frame = 0 
Query:   66 GGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLEDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            GGAEHLARIHGTEED+VNCPFYFKIGACRHG+RCSR HNKP FSQT+L++HMY+NP S +  A        P     KT     EDFEDFFEEVYEEL KFG ++ ++VCDNLG+H++GNVYAKF DEE A  A++ L GR+Y G+ L  EFSPVTDFREARCRQ+DEG C+ G YCNF+H+K +   +  +L
Sbjct:   50 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVKHMYQNPLSVIIAA-----NGDPSQLDQKTVD---EDFEDFFEEVYEELCKFGKVDELNVCDNLGDHLVGNVYAKFDDEECAAAAQKALYGRFYGGRPLICEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKMVSHAMMIEL 234
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: XP_002999307.1 (splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4] >EEY69453.1 splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4])

HSP 1 Score: 261.9 bits (668), Expect = 2.800e-66
Identity = 119/192 (61.98%), Postives = 150/192 (78.12%), Query Frame = 0 
Query:   68 AEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGL-EDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            AEHLARIHGTEED+VNCPFYFKIGACRHG+RCSR HNKP FSQT+L+ HMY+NP + +          A  G     +Q  + EDFEDF+EEV+EEL KFG +E +++CDNLG+H++GNVYAK+ DEE A  A++ L GR+YAG+ L  EFSPVTDFREARCRQ+DEG C+ G YCNF+H+KT+ R ++R+L
Sbjct:   57 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIAQVI---------AQNGDPASLDQRQVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYAKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVSRSMQREL 239
[Close]
BLAST of NO06G03310 vs. NCBI_GenBank
Match: XP_009518861.1 (hypothetical protein PHYSODRAFT_370516, partial [Phytophthora sojae] >EGZ23573.1 hypothetical protein PHYSODRAFT_370516, partial [Phytophthora sojae])

HSP 1 Score: 261.5 bits (667), Expect = 3.600e-66
Identity = 119/191 (62.30%), Postives = 150/191 (78.53%), Query Frame = 0 
Query:   68 AEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLEDFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEARQGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTIGRGLRRDL 259
            AEHLARIHGTEED+VNCPFYFKIGACRHG+RCSR HNKP FSQT+L+ HMY+NP + +      G+ A+    H        E+FEDF+EEV+EEL KFG LE +++CDNLG+H++GNVYAK+ DEE A  A++ L GR+YAG+ L  EFSPVTDFREARCRQ+DEG C+ G YCNF+H+KT+ R ++R+L
Sbjct:    1 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIAQVIA--QNGDPASLDQRHVD------EEFEDFYEEVFEELCKFGKLEELNICDNLGDHLVGNVYAKYEDEEHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPRSMQREL 183
The following BLAST results are available for this feature:
BLAST of NO06G03310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854346.13.100e-10590.40splicing factor U2AF 35 kDa subunit, partial [Nann... [more]
EWM26330.13.100e-10590.40u2 small nuclear auxiliary small [Nannochloropsis ... [more]
CCA15308.11.800e-6863.21splicing factor U2AF 35 kDa subunit putative [Albu... [more]
CCI44589.16.700e-6862.89unnamed protein product [Albugo candida][more]
XP_009034974.11.100e-6762.30hypothetical protein AURANDRAFT_14519, partial [Au... [more]
XP_009825980.14.300e-6763.73hypothetical protein H257_03540 [Aphanomyces astac... [more]
XP_008608040.19.600e-6763.21hypothetical protein SDRG_04157 [Saprolegnia dicli... [more]
XP_012202050.19.600e-6763.21hypothetical protein SPRG_07523 [Saprolegnia paras... [more]
XP_002999307.12.800e-6661.98splicing factor U2AF 35 kDa subunit [Phytophthora ... [more]
XP_009518861.13.600e-6662.30hypothetical protein PHYSODRAFT_370516, partial [P... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000146NSK000146Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03310.1NO06G03310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672524gene_6654Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100078g8gene4204Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03310.1NO06G03310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03310 ID=NO06G03310|Name=NO06G03310|organism=Nannochloropsis oceanica|type=gene|length=2154bp
TGGGACGAGAGTGTGAGTGTGAGTGCCGTATGAGTGCCGTATGTTAAGTA
CTCTGCTTTGGAAAGCTGAAGGGACGCCGGGGCGTCGATGACAACACACC
AGGAAGGCAACAGACAACACGCACAGAAGCTTGTATGCCTTTTGGCTTTT
TACACCACCCTTGTCCCTCGCACTCATTGCATACAAGCTACCTTACAACT
CCTCAGTCCCTGGCTACAAATACGCAGATTGTTGCTGGATTCTCGTCCCT
GCCTGCCTAACTCTTTCTCTGCCCACTCTTATCACCATGAAGAATAAGCA
AGTCGCTTGTGGATTCCACCAAGCTCACTGTCCCTCCTCTCTTTTCCCGC
ACACACAGACGTTTCTCTCAGACATTCTTAAGCACCAAGCATGAGCCACT
ACGGGCGCGGTGGCGGAGAGGATTACGGCCGGGACCGTGGCGACCGCGGC
GGGCGTGATCGAGGAGGGGGAGGAGGCTACTATGAAGACCGCCGGGGCGG
GGACCGGCGAGGCGGCGGCGACCGACGCGgtacgttactcgtgttggtat
gacatgtgtgtgtgtgagggtggggcgttctttacttgtgcgggaaaggc
tgacttgtcttgtccctgctcctatcgatcgtcatccgtccgtactcact
ccttctttccttttcctcctcccgcttttcctgaaataacaatagGCCCT
CGCGATGAAGGCGGGCGCCACTGGCGCGATCGGCACCTGGGGAATGCCAA
AGGCGGCGCCGAACACTTGGCTCGCATCCACGGCACGGAGGAAGACAAGG
TCAACTGCCCCTTCTACTTTAAGATTGGGGCTTGCCGCCACGGAGAACGG
TGCTCGCGTAAGCACAATAAGCCACCCTTCTCGCAGACGTTGCTATTGAG
GCATATGTACAAGAATCCCTCGTCTGCTTTGTTTACGGCGCCAGCGCGGG
GGGAGCGGGCGGCACCGCAGGGGGCGCATGATAAGACGAATCAGGAGGGC
TTGGAGGATTTCGAGGACTTCTTTGAGGAAGTCTATGAGgtgggtgcatt
tgctctatttgcgtgatgtttgtctttggtggtccctgtctgcctttatt
tgtggaagatttctctcgaatacctacttcttgactctcacacaaacatg
tcttgcgctgatcttttctggttgccccttccttccccaaccattattta
acttcctgcccccccctctctctcgtgcccctctcttttgtagGAACTAG
CCAAATTCGGACATTTGGAAGGAATGCACGTGTGTGACAACTTAGGCGAG
CACATGATCGGGAACGTCTATGCCAAGTTTTCGGACGAGGAAGAGGCCGA
CGAAGCGCGACAAGGGCTGAATGGTCGTTATTACGCAGGACAGACACTGC
AGGTGGAGTTCTCACCAGTCACAGATTTCAGGGAAGCGAGATGCCGTCAG
TATGATGAAGGGCAGTGTAGCTATGGCCCGTATTGCAACTTTTTGCACGT
CAAGACGATCGGGCGGGGCTTGAGGAGGGACCTGGAAAGGCGGGCGAGGA
GGAGGAGGGAGAGGAGGAGCAGGAGTAGAAGTCGATCGGAGGAGGGGGGA
GAAAAGAGGGAGAGGAGTCGCAGTGGGAGTGCGGGAAGGGAGGGGGAAAG
GGATAGAGAGGCGAGAGAAGGAGAAGAGGACGGGGCAGAAGGAGAGACAG
CGGGGAAAAAGAAAGAGGAGGGTGAGGAGGTGCTGGGGGGGACAAATGGT
GGGGGAGTGCAAGAAGAGCAGCCGATGGTGGGAGAAGGGGCAGCAGCTGC
GGACGAGGTTTGAGAGAATATTGAGGGAGGGAGTAAGGGAGTGACGGAGG
AAGGGAGGAAAGGCGGGAACTTCATGAGGTAGATCCTCGAAAGTTCTTAT
TTGTTTAGGCACGTTGGGCGAGAGGGGGGTTTGAGGCGATGGAATGGGTC
GAGGGACAGGGGAGAGATCGAGGAAGAAGAAGACGGCAAACATAGAAGTG
ACAAAAAGGGGCTTGAATTTAAAGCGGTAGACATGGCCACAAAGACCAAA
AATAAGAGAAAGATTGCAGAATTGCACATTCTCAATCTGTTCGCTTGGGT
GTGCTTACTGAAGGTCAAGTACAAGAATAACTTTGCCGAGAGTCACCACA
CACG
back to top

protein sequence of NO06G03310.1

>NO06G03310.1-protein ID=NO06G03310.1-protein|Name=NO06G03310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=351bp
MSHYGRGGGEDYGRDRGDRGGRDRGGGGGYYEDRRGGDRRGGGDRRGPRD
EGGRHWRDRHLGNAKGGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCS
RKHNKPPFSQTLLLRHMYKNPSSALFTAPARGERAAPQGAHDKTNQEGLE
DFEDFFEEVYEELAKFGHLEGMHVCDNLGEHMIGNVYAKFSDEEEADEAR
QGLNGRYYAGQTLQVEFSPVTDFREARCRQYDEGQCSYGPYCNFLHVKTI
GRGLRRDLERRARRRRERRSRSRSRSEEGGEKRERSRSGSAGREGERDRE
AREGEEDGAEGETAGKKKEEGEEVLGGTNGGGVQEEQPMVGEGAAAADEV
*
back to top
Synonyms
Publications