NO06G02960, NO06G02960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_008875077.1 (hypothetical protein H310_10456 [Aphanomyces invadans] >ETV96285.1 hypothetical protein H310_10456 [Aphanomyces invadans]) HSP 1 Score: 210.7 bits (535), Expect = 4.700e-51 Identity = 108/196 (55.10%), Postives = 139/196 (70.92%), Query Frame = 0 Query: 22 DIPGQRRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAV 218 D RP VLLAA+GSVA +K+P +AV+L A V++++T +A F D A Y+P A F+AL + +L D DEW W ++GD VLHIQ+RDWAD++ IAPLSANT+ KLA+GLCDNLLT V RAW +PV+VAPAMNT M+ H T+ QL +L++ GY VVPPVSK LACG+ G G LA V+ +VAAV Sbjct: 128 DATKSSRPRVLLAASGSVAAVKIPALAVQLA--AVADVRILVTKAATFFLDMAAAYDPVAHAAFDAL--ALPILHDDDEWSAWSSLGDPVLHIQLRDWADVLCIAPLSANTMAKLAHGLCDNLLTCVARAWSPTKPVIVAPAMNTQMYQHRVTSSQLALLRS-FGYTVVPPVSKTLACGEVGNGALAAVDTIVAAV 318
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_009828556.1 (hypothetical protein H257_05389 [Aphanomyces astaci] >ETV81819.1 hypothetical protein H257_05389 [Aphanomyces astaci]) HSP 1 Score: 210.3 bits (534), Expect = 6.200e-51 Identity = 108/195 (55.38%), Postives = 138/195 (70.77%), Query Frame = 0 Query: 27 RRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYL 222 RRP VLLAA+GSVAT+KVP +AV+L A V+VV+T +AQ F D+A Y+P A F AL + +L D DEW W ++GD VLHI +RDWAD+M IAPLSANT+ KLA GLCDNL+T V RAW +P++VAPAMNT M+ HP T L +L++ GY +V PVSK LACG+ G G LA+V+ +V V + L Sbjct: 134 RRPRVLLAASGSVATVKVPALAVQLA--AVADVRVVVTKAAQFFLDKAATYDPEAHAAFIAL--SLPILRDDDEWNAWSSLGDPVLHIHLRDWADVMCIAPLSANTMAKLAGGLCDNLVTCVARAWSTAKPLIVAPAMNTQMYAHPATESHLHLLRS-FGYSIVSPVSKTLACGEVGNGALASVDTIVGTVVRSL 323
BLAST of NO06G02960 vs. NCBI_GenBank
Match: OQR90760.1 (phosphopantothenoylcysteine decarboxylase [Achlya hypogyna]) HSP 1 Score: 206.8 bits (525), Expect = 6.800e-50 Identity = 103/206 (50.00%), Postives = 144/206 (69.90%), Query Frame = 0 Query: 26 QRRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGD--------------AGQGGLATVEDLVAAV 218 ++RP VL+AA+GSVAT+K+PEI V+L + A+V++VLT +A F ++A YNP+ + +EAL I + D+DEW W+A+GD +LHIQ+RDWAD+ ++APLSAN++ KLANGL DNLLT V RAW +P++VAPAMNT MW HP T + L +L+ + Y ++ PVSK+LACG+ G G LA V+D+VA V Sbjct: 8 KQRPRVLVAASGSVATVKIPEIVVKLAE--HAEVQLVLTKAAAFFLEKAASYNPSMFAAYEAL--NITIHRDEDEWSSWNAIGDPILHIQLRDWADVFVVAPLSANSMAKLANGLSDNLLTCVARAWSSAKPLLVAPAMNTQMWLHPCTDKHLRVLEGEYVYRIIRPVSKMLACGETGARTSCWLRITTFVGYGALAHVDDIVACV 209
BLAST of NO06G02960 vs. NCBI_GenBank
Match: POM63595.1 (Phosphopantothenoylcysteine decarboxylase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 205.3 bits (521), Expect = 2.000e-49 Identity = 108/195 (55.38%), Postives = 131/195 (67.18%), Query Frame = 0 Query: 27 RRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEA---LQD---EIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVA 216 R P VLL A+GSVAT+KVPEIAVRL F RAK YN W +F+A L+D I V+ D+DEWE W+ +GD V HI+++DWAD+ML+AP+SANTLGKLANGL DNLLT + RAW + +P V APAMNT MW HP TA L +L + GY +VPPV K LACG G GGLATV+ +VA Sbjct: 9 RSPRVLLCASGSVATVKVPEIAVRL--XXXXXXXXXXXXXXXFFLQRAKDYNAQVWEQFDAATKLEDGEGRIAVVRDEDEWEAWNVVGDSVRHIELKDWADVMLLAPMSANTLGKLANGLADNLLTCIARAWIMTKPFVFAPAMNTDMWNHPITATHLRVLD-EFGYKMVPPVEKKLACGVVGNGGLATVDSIVA 200
BLAST of NO06G02960 vs. NCBI_GenBank
Match: POM76869.1 (Phosphopantothenoylcysteine decarboxylase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 204.9 bits (520), Expect = 2.600e-49 Identity = 107/195 (54.87%), Postives = 131/195 (67.18%), Query Frame = 0 Query: 27 RRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEA---LQD---EIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVA 216 R P VLL A+GSVAT+KVPEIAVRL F RAK YN W +F+A L+D I V+ D+DEWE W+ +GD V HI+++DWAD+ML+AP+SANTLGKLANGL DNLLT + RAW + +P + APAMNT MW HP TA L +L + GY +VPPV K LACG G GGLATV+ +VA Sbjct: 9 RSPRVLLCASGSVATVKVPEIAVRL--XXXXXXXXXXXXXXXFFLQRAKDYNAQVWEQFDAATKLEDGEGRIAVVRDEDEWEAWNVVGDSVRHIELKDWADVMLLAPMSANTLGKLANGLADNLLTCIARAWIMTKPFIFAPAMNTDMWNHPITATHLRVLD-EFGYKMVPPVEKKLACGVVGNGGLATVDSIVA 200
BLAST of NO06G02960 vs. NCBI_GenBank
Match: GBG26598.1 (Coenzyme A biosynthesis bifunctional protein coaBC, putative [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 196.8 bits (499), Expect = 7.100e-47 Identity = 106/197 (53.81%), Postives = 132/197 (67.01%), Query Frame = 0 Query: 27 RRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEAL--QDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYL 222 RRP VL+ A GSVA +KVPEI RL K+ A V+VV T +A F + A YN + L +I L D DEW D V+HI++R WAD+ LIAPLSAN+L K+++GLCDNLLTSV RAWD +P++VAPAMNT MW HP T+ QLG L++ G VV PVSK LACGD G G LA V+ ++AAVK+ L Sbjct: 7 RRPRVLVGACGSVAVVKVPEIVSRLVKEHDADVRVVWTGNACRFDEAAANYNAETKASLKDLISSGKIQSLVDDDEWNYKHVGKDPVVHIELRKWADVFLIAPLSANSLAKISHGLCDNLLTSVARAWDYSKPMLVAPAMNTFMWDHPLTSEQLGKLRS-FGAGVVSPVSKTLACGDTGSGALAPVDQILAAVKESL 202
BLAST of NO06G02960 vs. NCBI_GenBank
Match: KFH70938.1 (phosphopantothenoylcysteine decarboxylase [Mortierella verticillata NRRL 6337]) HSP 1 Score: 196.1 bits (497), Expect = 1.200e-46 Identity = 99/206 (48.06%), Postives = 137/206 (66.50%), Query Frame = 0 Query: 21 PDIPGQRRPHVLLAATGSVATIKVPEIAVRLTKDIS--AKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIM-VLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYLGR 224 P + G++R VL+ ATGSVA++K+P I L ++I ++KVV T +A HF+DR +D + +L DK EW+ W M D V+HI +R+WAD+ +I PL ANTL KLA+GLCDNL+T ++RAWD RPV+V PAMNT+MW H FTA+ L +L +L Y V+PP+SKLLACGD G G +A +V A+K+ + R Sbjct: 9 PVLHGKKR--VLIGATGSVASVKIPIIVKTLVEEIGDLVEIKVVTTNAALHFFDR---------------KDVVAEILTDKSEWDAWGKMSDPVMHIDLRNWADMFIICPLDANTLAKLASGLCDNLITCILRAWDESRPVIVCPAMNTNMWNHKFTAKHLAVLTEELHYQVIPPISKLLACGDLGIGAMAEYRTIVDAIKEEVER 197
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_008875078.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV96286.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 195.7 bits (496), Expect = 1.600e-46 Identity = 100/182 (54.95%), Postives = 129/182 (70.88%), Query Frame = 0 Query: 22 DIPGQRRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAG 204 D RP VLLAA+GSVA +K+P +AV+L A V++++T +A F D A Y+P A F+AL + +L D DEW W ++GD VLHIQ+RDWAD++ IAPLSANT+ KLA+GLCDNLLT V RAW +PV+VAPAMNT M+ H T+ QL +L++ GY VVPPVSK LACG+ G Sbjct: 128 DATKSSRPRVLLAASGSVAAVKIPALAVQLA--AVADVRILVTKAATFFLDMAAAYDPVAHAAFDAL--ALPILHDDDEWSAWSSLGDPVLHIQLRDWADVLCIAPLSANTMAKLAHGLCDNLLTCVARAWSPTKPVIVAPAMNTQMYQHRVTSSQLALLRS-FGYTVVPPVSKTLACGEVG 304
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_023278250.1 (phosphopantothenoylcysteine decarboxylase isoform X1 [Seriola lalandi dorsalis] >XP_023278251.1 phosphopantothenoylcysteine decarboxylase isoform X2 [Seriola lalandi dorsalis]) HSP 1 Score: 193.7 bits (491), Expect = 6.000e-46 Identity = 96/192 (50.00%), Postives = 128/192 (66.67%), Query Frame = 0 Query: 30 HVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYL 222 H+L+ TGSVA +K+P + +L + V+V+ T A+HF YNPA + + + DKDEWE W D VLHI++R WADL++IAPL ANTLGK+ANG+CDNLLT VVRAWD RP++ PAMNT MW HP TARQ+ L+ + GY +P ++K L CGD G+G +A V +V+AVK+YL Sbjct: 22 HILVGVTGSVAALKLPLLVSQLLQLSGVDVRVITTEHAKHF------YNPA--------EVSVKIYSDKDEWEMWTQRSDPVLHIELRRWADLLVIAPLDANTLGKVANGICDNLLTCVVRAWDTSRPLLFCPAMNTAMWQHPITARQVSSLK-EFGYVEIPCIAKKLVCGDEGKGAMAEVSTIVSAVKQYL 198
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_006682439.1 (hypothetical protein BATDEDRAFT_33781 [Batrachochytrium dendrobatidis JAM81] >EGF77003.1 hypothetical protein BATDEDRAFT_33781 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 193.4 bits (490), Expect = 7.800e-46 Identity = 96/194 (49.48%), Postives = 129/194 (66.49%), Query Frame = 0 Query: 30 HVLLAATGSVATIKVPEIAVRLTKDI--SAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYL 222 H+L+ TGSVATIK+P + +L + + ++K++ T ++QHF + + I VL DKDEW+ W + D VLHI +R+WADL +IAPL ANT+ K +GLCDNLLT V+RAWD +PVVV PAMNTHMW+HP T++QL +L +LGY +V P+SK LACGD G G +A V D+VA K L Sbjct: 2 HILVGVTGSVATIKLPLLIKQLKESFPTNLEIKIIATHASQHFINTHE-------------IGSISVLTDKDEWDAWKKIPDPVLHIDLRNWADLFIIAPLDANTMAKAVHGLCDNLLTCVLRAWDSSKPVVVCPAMNTHMWSHPITSKQLTVLSQELGYVIVHPISKQLACGDVGIGAMADVSDIVAVALKTL 182 The following BLAST results are available for this feature:
BLAST of NO06G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02960 ID=NO06G02960|Name=NO06G02960|organism=Nannochloropsis oceanica|type=gene|length=675bpback to top protein sequence of NO06G02960.1 >NO06G02960.1-protein ID=NO06G02960.1-protein|Name=NO06G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=225bpback to top Synonyms
Publications
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