NO06G02740, NO06G02740 (gene) Nannochloropsis oceanica

Overview
NameNO06G02740
Unique NameNO06G02740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length933
Alignment locationchr6:770498..771430 -

Link to JBrowse

Properties
Property NameValue
DescriptionC-1-tetrahydrofolate cytoplasmic
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:770498..771430 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004488methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR020630THF_DH/CycHdrlase_cat_dom
IPR020631THF_DH/CycHdrlase_NAD-bd_dom
IPR000672THF_DH/CycHdrlase
Homology
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: EWM26288.1 (c-1-tetrahydrofolate cytoplasmic [Nannochloropsis gaditana])

HSP 1 Score: 538.5 bits (1386), Expect = 1.400e-149
Identity = 274/312 (87.82%), Postives = 288/312 (92.31%), Query Frame = 0 
Query:    1 MATPSS---DNIIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKRKAQEG 310
            MATPSS   DNIIDGK IAE IRGEIK+EC ALL SS V PGLAVVLVGNRTDSATYVRMKIKACEEVGI+SFKF+FP DVTEADLIAKV ELNADPAVHGILVQLP+P HIHEQKVLDTILPDKDVDGLHPLNLA+LAHTNTHGS  KFDLK LP+HAACTPQGCIELIERSG VIEGKEAVVIGRSNIVGIPV LLLMQKNATVT++HSRTKDA+AVCKRADI+VAAVGRAEMVK D++KPGAVVIDVGINSVDDPTSK+GY+LVGDVDF GCK VAGKITPVPGGVGPMTIAMLLRNTLQGAKR    G
Sbjct:    1 MATPSSSSADNIIDGKVIAETIRGEIKEECAALLQSSGVTPGLAVVLVGNRTDSATYVRMKIKACEEVGIHSFKFDFPSDVTEADLIAKVAELNADPAVHGILVQLPLPGHIHEQKVLDTILPDKDVDGLHPLNLAQLAHTNTHGSSRKFDLKTLPYHAACTPQGCIELIERSGTVIEGKEAVVIGRSNIVGIPVFLLLMQKNATVTVIHSRTKDASAVCKRADIVVAAVGRAEMVKPDWIKPGAVVIDVGINSVDDPTSKKGYRLVGDVDFAGCKAVAGKITPVPGGVGPMTIAMLLRNTLQGAKRGLSGG 312
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: CBN74902.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 370.9 bits (951), Expect = 3.800e-99
Identity = 194/297 (65.32%), Postives = 226/297 (76.09%), Query Frame = 0 
Query:    9 IIDGKAIAEVIRGEIKDECTALLASS-DVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKL--AHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGA 303
            IIDGKA A  IR          + SS    PGLAVVLVG+R DSATYVRMK KAC+E+G++SF F+FPEDVT+  L+A V ELN+ P VHGILVQLP+P HI EQ VL  I P KDVDGLHP N+A L    T   G    + LK L FH  CTPQGCIEL++R G+ I GK AVV+GRSNIVGIPVS+LLM ++ATVT+ HS+T D A+V + ADI+V A GRAEMVKAD++KPGA VIDVGINSVDD T+K+GY+LVGDVDF+  K VA KITPVPGGVGPMTIAMLLRNT+ GA
Sbjct:  150 IIDGKATAAAIRAXXXXXXXXXVQSSGGPPPGLAVVLVGDRRDSATYVRMKKKACDEIGVSSFGFDFPEDVTQDTLLACVGELNSRPDVHGILVQLPLPKHIDEQSVLQAITPSKDVDGLHPANVAALCTGRTRAPGQAASWQLKDLDFHVPCTPQGCIELLDRYGVEISGKRAVVLGRSNIVGIPVSMLLMHRDATVTMTHSKTVDIASVVREADIVVCAAGRAEMVKADWIKPGAAVIDVGINSVDDATTKKGYRLVGDVDFKAAKEVAAKITPVPGGVGPMTIAMLLRNTVNGA 446
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: XP_006840503.1 (bifunctional protein FolD 2 [Amborella trichopoda] >ERN02178.1 hypothetical protein AMTR_s00045p00199380 [Amborella trichopoda])

HSP 1 Score: 358.6 bits (919), Expect = 1.900e-95
Identity = 184/298 (61.74%), Postives = 227/298 (76.17%), Query Frame = 0 
Query:    8 NIIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKRK 306
            N+IDGKAIA  IR EI  E + L       PGLAVV+VGNR DS +YV+MK KAC EVGI SF  + PEDV+E ++I KV E NADP VHGILVQLP+P HI+E+KVL  I  +KDVDG HPLN+ KLA       KG+      P    CTP+GC+EL+ RSG+ ++ K+AVV+GRSNIVG+PV+LLL++ +ATVTIVHSRT +  ++ + ADI++AA G+A M+K D++KPGA VIDVG NSVDDPT K GY+LVGDVDFE  K VAG +TPVPGGVGPMT+AMLL+NTL+GAKRK
Sbjct:   10 NLIDGKAIANTIRKEIASEVSYLSQKYGKVPGLAVVIVGNRKDSQSYVKMKRKACAEVGIKSFDTDLPEDVSEEEVIRKVHEFNADPDVHGILVQLPLPNHINEEKVLSEISIEKDVDGFHPLNIGKLA------MKGR-----EPLFLPCTPKGCLELLSRSGVSVKNKKAVVVGRSNIVGLPVALLLLKADATVTIVHSRTHNPESIIREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSVDDPTKKSGYRLVGDVDFEQAKRVAGWLTPVPGGVGPMTVAMLLKNTLEGAKRK 296
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: XP_012435936.1 (PREDICTED: bifunctional protein FolD 2 isoform X1 [Gossypium raimondii] >KJB47084.1 hypothetical protein B456_008G010500 [Gossypium raimondii] >KJB47087.1 hypothetical protein B456_008G010500 [Gossypium raimondii])

HSP 1 Score: 358.2 bits (918), Expect = 2.500e-95
Identity = 190/310 (61.29%), Postives = 229/310 (73.87%), Query Frame = 0 
Query:    1 MATPS--SDNIIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKRKAQE 309
            MA+PS     IIDGKAIA+ IR EI DE   L       PGLAVV+VGNR DS +YV MK KAC EVGI SF    PE+V E++LI+KV ELNA+P VHGILVQLP+P HI+E+KVL  I  +KDVDG HPLN+ KLA       KG+      P    CTP+GC+EL+ RSG+ ++GK AVV+GRSNIVG+PVSLLL++ +ATVTIVHSRT D   + + ADI++AA G+A M+K  ++KPGA VIDVG N+VDDPT + GY+LVGDVDFE    VAG ITPVPGGVGPMT+AMLLRNTL GAKR  +E
Sbjct:    1 MASPSDRKATIIDGKAIAQTIRSEIADEVRHLSQKYGKVPGLAVVIVGNRKDSLSYVGMKRKACAEVGIRSFDMNLPEEVLESELISKVHELNANPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLA------MKGR-----EPLFQPCTPKGCLELLSRSGVSVKGKNAVVVGRSNIVGLPVSLLLLKADATVTIVHSRTPDPERLVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDPTKRSGYRLVGDVDFEAAFRVAGWITPVPGGVGPMTVAMLLRNTLDGAKRVIEE 299
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: XP_004152261.1 (PREDICTED: bifunctional protein FolD 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 4.300e-95
Identity = 187/300 (62.33%), Postives = 227/300 (75.67%), Query Frame = 0 
Query:    9 IIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKRKAQE 309
            IIDGK IA+ +R EI +E   L       PGLAVV+VGNR DS TYV MK KAC EVGI SF+ + PE V+EA+LI+KV ELNA+P VHGILVQLP+P HI+E+KVL  I  +KDVDG HPLN+ KLA       KG+      P    CTP+GCIEL+ RSG+ I GK+AVV+GRSNIVG+PVSLLL++ +ATVTIVHSR+ D  +V + ADII+AA G+A+M+K  ++KPGA VIDVG N+VDDPT K GY+LVGDVDF+    VAG ITPVPGGVGPMT+AMLLRNTL GAKR  ++
Sbjct:   11 IIDGKKIAQTVRSEITEEVNKLSQKYGKIPGLAVVIVGNRKDSLTYVNMKRKACLEVGIKSFEIDLPEQVSEAELISKVHELNANPEVHGILVQLPLPNHINEEKVLSEISIEKDVDGFHPLNIGKLA------MKGRD-----PLFLPCTPKGCIELLSRSGISIRGKKAVVMGRSNIVGLPVSLLLLKADATVTIVHSRSVDPESVIREADIIIAAAGQAQMIKGSWIKPGAAVIDVGTNAVDDPTKKSGYRLVGDVDFQEACKVAGWITPVPGGVGPMTVAMLLRNTLDGAKRVIEQ 299
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: KGN52787.1 (hypothetical protein Csa_4G001540 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 4.300e-95
Identity = 187/300 (62.33%), Postives = 227/300 (75.67%), Query Frame = 0 
Query:    9 IIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKRKAQE 309
            IIDGK IA+ +R EI +E   L       PGLAVV+VGNR DS TYV MK KAC EVGI SF+ + PE V+EA+LI+KV ELNA+P VHGILVQLP+P HI+E+KVL  I  +KDVDG HPLN+ KLA       KG+      P    CTP+GCIEL+ RSG+ I GK+AVV+GRSNIVG+PVSLLL++ +ATVTIVHSR+ D  +V + ADII+AA G+A+M+K  ++KPGA VIDVG N+VDDPT K GY+LVGDVDF+    VAG ITPVPGGVGPMT+AMLLRNTL GAKR  ++
Sbjct:   85 IIDGKKIAQTVRSEITEEVNKLSQKYGKIPGLAVVIVGNRKDSLTYVNMKRKACLEVGIKSFEIDLPEQVSEAELISKVHELNANPEVHGILVQLPLPNHINEEKVLSEISIEKDVDGFHPLNIGKLA------MKGRD-----PLFLPCTPKGCIELLSRSGISIRGKKAVVMGRSNIVGLPVSLLLLKADATVTIVHSRSVDPESVIREADIIIAAAGQAQMIKGSWIKPGAAVIDVGTNAVDDPTKKSGYRLVGDVDFQEACKVAGWITPVPGGVGPMTVAMLLRNTLDGAKRVIEQ 373
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: XP_008454369.1 (PREDICTED: bifunctional protein FolD 2 isoform X1 [Cucumis melo])

HSP 1 Score: 357.1 bits (915), Expect = 5.700e-95
Identity = 185/300 (61.67%), Postives = 227/300 (75.67%), Query Frame = 0 
Query:    9 IIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKRKAQE 309
            IIDGK IA+ +R E+ +E   L       PGLAVV+VGNR DS TYV MK KAC EVGI SF+ + PE V+EA+LI+KV ELNA+P VHGILVQLP+P HI+E+KVL  I  +KDVDG HPLN+ KLA       KG+      P    CTP+GC+EL+ RSG+ I GK+AVV+GRSNIVG+PVSLLL++ +ATVTIVHSR+ D  +V + ADII+AA G+A+M+K  ++KPGA VIDVG N+VDDPT K GY+LVGDVDF+    VAG ITPVPGGVGPMT+AMLLRNTL GAKR  ++
Sbjct:   11 IIDGKKIAQTVRSEVAEEVNKLSEKYGKVPGLAVVIVGNRKDSLTYVNMKRKACLEVGIKSFEIDLPEQVSEAELISKVHELNANPEVHGILVQLPLPNHINEEKVLSEISIEKDVDGFHPLNIGKLA------MKGRD-----PLFLPCTPKGCLELLSRSGISIRGKKAVVMGRSNIVGLPVSLLLLKADATVTIVHSRSVDPESVIREADIIIAAAGQAQMIKGSWIKPGAAVIDVGTNAVDDPTKKSGYRLVGDVDFQEACKVAGWITPVPGGVGPMTVAMLLRNTLDGAKRAIEQ 299
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: XP_019256811.1 (PREDICTED: bifunctional protein FolD 2-like [Nicotiana attenuata] >XP_019256812.1 PREDICTED: bifunctional protein FolD 2-like [Nicotiana attenuata] >OIS95754.1 bifunctional protein fold 2 [Nicotiana attenuata])

HSP 1 Score: 357.1 bits (915), Expect = 5.700e-95
Identity = 187/306 (61.11%), Postives = 226/306 (73.86%), Query Frame = 0 
Query:    1 MATPSSD--NIIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKR 305
            MA+PS     IIDGKAIA+ IR EI  E   L       PGLAVV+VGNR DS +YV MK K+C E+GI SF  + PEDV E +LI+KV ELNA+P VHGILVQLP+P HI+E++VL  I  +KDVDG HPLN+ KLA  +             P    CTP+GCIEL+ RSG+ I+GK AVV+GRSNIVG+PVSLLL+++NATVTIVHSRTK+   + + ADII+AA G+A M+K  ++KPGA VIDVG N+VDDPT K GY+LVGDVDF+    VAG ITPVPGGVGPMT+AMLL+NTL GAKR
Sbjct:    1 MASPSDHKATIIDGKAIAQTIRSEIASEVRLLSEKYGKVPGLAVVIVGNRKDSQSYVNMKRKSCAELGIQSFDIDLPEDVAEDELISKVHELNANPDVHGILVQLPLPKHINEERVLGEISLEKDVDGFHPLNIGKLAMKDRQ-----------PLFLPCTPKGCIELLHRSGISIKGKNAVVVGRSNIVGLPVSLLLLKENATVTIVHSRTKEPEKIVREADIIIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDPTRKSGYRLVGDVDFQEACNVAGWITPVPGGVGPMTVAMLLKNTLDGAKR 295
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: OAY62556.1 (Bifunctional protein FolD 2, partial [Ananas comosus])

HSP 1 Score: 356.7 bits (914), Expect = 7.400e-95
Identity = 185/297 (62.29%), Postives = 228/297 (76.77%), Query Frame = 0 
Query:    9 IIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKRK 306
            IIDGKAIA+ IR EI  E  +L  +    PGLAVV+VG R DS +YV MK KAC EVGI SF  + PE ++E++LIAKV ELNA+P VHGILVQLP+P HI+++KVL  I  DKDVDG HPLN+ KLA       KG+  L  LP    CTP+GC+EL+ RSG+ I+GK AVV+GRSNIVG+PV+LLL++ +ATVTIVHS T D+ A+ + ADI++AA G+A M+K D++KPGA VIDVG N+VDDP+ K GY+LVGDVDF+    VAG ITPVPGGVGPMT+AMLL+NTL GAKRK
Sbjct:   32 IIDGKAIAQTIRNEIAQEVRSLSDAHHKVPGLAVVIVGTRKDSQSYVNMKRKACAEVGIRSFDLDLPEQISESELIAKVHELNANPDVHGILVQLPLPKHINDEKVLSEINIDKDVDGFHPLNIGKLA------MKGRESL-FLP----CTPKGCLELLSRSGITIKGKRAVVVGRSNIVGLPVALLLLKADATVTIVHSHTPDSEAIIREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVDDPSKKSGYRLVGDVDFQEASRVAGWITPVPGGVGPMTVAMLLKNTLDGAKRK 317
[Close]
BLAST of NO06G02740 vs. NCBI_GenBank
Match: XP_021765646.1 (bifunctional protein FolD 2-like [Chenopodium quinoa])

HSP 1 Score: 356.7 bits (914), Expect = 7.400e-95
Identity = 185/299 (61.87%), Postives = 225/299 (75.25%), Query Frame = 0 
Query:    6 SDNIIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTDSATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGILVQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLKALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKNATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGINSVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQGAKR 305
            S  IIDGKAIA+ IR EI DE   L  +    PGLAVV+VGNR DS +YV MK KAC EVGI SF  + PE V+E +LIAKV ELNA+P VHGILVQLP+P HI+E+ VL  I  +KDVDG HPLN+ KLA       KG+      P    CTP+GC+EL+ RSG+ I+GK+AVV+GRSNIVG+PVSLLL++ +AT++IVHSRT D  ++ + ADI++AA G+A M+K D++KPGA VIDVG N+VDDP+ K GY+LVGDVDF     VAG ITPVPGGVGPMT+AMLLRNTL GAKR
Sbjct:    2 SAKIIDGKAIAQTIRSEIADEVRLLSQNHAKVPGLAVVIVGNRKDSQSYVNMKRKACAEVGIKSFDIDLPEQVSEPELIAKVHELNANPEVHGILVQLPLPKHINEENVLSEISIEKDVDGFHPLNIGKLA------MKGRD-----PLFQPCTPKGCLELLSRSGISIKGKKAVVVGRSNIVGLPVSLLLLKADATISIVHSRTTDPESIIREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVDDPSKKSGYRLVGDVDFHEVSKVAGWITPVPGGVGPMTVAMLLRNTLDGAKR 289
The following BLAST results are available for this feature:
BLAST of NO06G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26288.11.400e-14987.82c-1-tetrahydrofolate cytoplasmic [Nannochloropsis ... [more]
CBN74902.13.800e-9965.32conserved unknown protein [Ectocarpus siliculosus][more]
XP_006840503.11.900e-9561.74bifunctional protein FolD 2 [Amborella trichopoda]... [more]
XP_012435936.12.500e-9561.29PREDICTED: bifunctional protein FolD 2 isoform X1 ... [more]
XP_004152261.14.300e-9562.33PREDICTED: bifunctional protein FolD 2 isoform X1 ... [more]
KGN52787.14.300e-9562.33hypothetical protein Csa_4G001540 [Cucumis sativus... [more]
XP_008454369.15.700e-9561.67PREDICTED: bifunctional protein FolD 2 isoform X1 ... [more]
XP_019256811.15.700e-9561.11PREDICTED: bifunctional protein FolD 2-like [Nicot... [more]
OAY62556.17.400e-9562.29Bifunctional protein FolD 2, partial [Ananas comos... [more]
XP_021765646.17.400e-9561.87bifunctional protein FolD 2-like [Chenopodium quin... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000184NSK000184Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02740.1NO06G02740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100073g14gene4240Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02740.1NO06G02740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02740 ID=NO06G02740|Name=NO06G02740|organism=Nannochloropsis oceanica|type=gene|length=933bp
ATGGCTACCCCTTCTTCCGACAATATCATCGACGGCAAGGCAATCGCAGA
GGTGATCCGAGGAGAGATTAAGGACGAGTGCACCGCCCTATTGGCATCTT
CGGACGTGAAGCCCGGCTTGGCTGTTGTGCTTGTGGGGAACCGTACGGAC
TCCGCGACCTACGTCCGAATGAAGATCAAGGCTTGTGAGGAGGTGGGGAT
CAATTCGTTCAAATTCGAGTTCCCCGAAGATGTGACCGAGGCAGATTTGA
TCGCCAAAGTTGAAGAATTGAATGCTGACCCAGCCGTGCATGGTATTTTG
GTACAGCTGCCCATTCCTCCTCACATTCATGAGCAGAAGGTCTTGGACAC
AATCCTGCCTGACAAGGACGTCGATGGTCTCCACCCTTTGAATCTGGCCA
AGCTGGCGCATACCAATACGCATGGATCCAAGGGGAAATTTGACTTAAAG
GCGTTGCCTTTCCACGCGGCCTGCACGCCCCAAGGGTGTATTGAGCTGAT
CGAGAGGTCCGGGATGGTGATTGAAGGCAAAGAAGCCGTAGTCATTGGGA
GGAGTAACATTGTTGGGATCCCCGTCTCTCTCCTTCTGATGCAAAAGAAT
GCAACCGTGACGATCGTGCACTCGCGAACAAAGGACGCGGCGGCGGTTTG
CAAACGCGCGGATATCATCGTGGCAGCCGTTGGGCGGGCGGAGATGGTCA
AGGCCGACTTTGTGAAGCCGGGGGCGGTGGTGATTGATGTGGGAATCAAC
AGTGTTGATGATCCGACGAGCAAGAGGGGGTATAAATTGGTGGGGGACGT
TGATTTTGAAGGCTGTAAGACGGTGGCGGGAAAGATAACCCCGGTGCCCG
GGGGTGTTGGCCCGATGACGATTGCGATGCTATTGAGGAATACGCTGCAG
GGGGCGAAGAGGAAGGCGCAAGAGGGGAAGTAG
back to top

protein sequence of NO06G02740.1

>NO06G02740.1-protein ID=NO06G02740.1-protein|Name=NO06G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MATPSSDNIIDGKAIAEVIRGEIKDECTALLASSDVKPGLAVVLVGNRTD
SATYVRMKIKACEEVGINSFKFEFPEDVTEADLIAKVEELNADPAVHGIL
VQLPIPPHIHEQKVLDTILPDKDVDGLHPLNLAKLAHTNTHGSKGKFDLK
ALPFHAACTPQGCIELIERSGMVIEGKEAVVIGRSNIVGIPVSLLLMQKN
ATVTIVHSRTKDAAAVCKRADIIVAAVGRAEMVKADFVKPGAVVIDVGIN
SVDDPTSKRGYKLVGDVDFEGCKTVAGKITPVPGGVGPMTIAMLLRNTLQ
GAKRKAQEGK*
back to top
Synonyms
Publications