NO06G02680, NO06G02680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_023249434.1 (retinol dehydrogenase 13-like [Seriola lalandi dorsalis]) HSP 1 Score: 223.0 bits (567), Expect = 1.400e-54 Identity = 127/303 (41.91%), Postives = 173/303 (57.10%), Query Frame = 0 Query: 11 IVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEW---LIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 I +A+ K+ + V L+GK ++TGA+ GIGKET R LA+ A VVMA R+ + E+IR + G G++ + +DLA SVR FA +L+S LD+LINNAG++ +TEDG E NHLGHFLLT LL+ L++SAPSRV+ VSS AH G+IDLD+L S TY+ +Y +KL NVLF EL RR + SGV S LHPG ++TE R V W L + L + +G++T + A P E G YF CA K+ D+ +A WE+S + Sbjct: 51 ICVAVLRKWIAGGVCRCSVRLDGKTILITGANTGIGKETSRDLARRGARVVMACRDLTRAERAAEEIRRTTGNGNVVIR--HLDLASVYSVRQFAKDFLDSEDRLDILINNAGVMMCPKWLTEDGFETQLAVNHLGHFLLTNLLLPKLKSSAPSRVVNVSSIAHRGGRIDLDDLFFSRRTYSSLESYRQSKLANVLFSRELARRLRGSGVSSFCLHPGVIRTELGRHVHGWFPLLGALLSLPSLLLMKTPAQGSQTTVYCAVTPGLEERSGRYFSDCAEKEVAPEGQDDVVARKLWEESSRLV 351
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_019647856.1 (PREDICTED: retinol dehydrogenase 14-like [Branchiostoma belcheri]) HSP 1 Score: 222.6 bits (566), Expect = 1.800e-54 Identity = 127/287 (44.25%), Postives = 173/287 (60.28%), Query Frame = 0 Query: 31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPE---WLI----PISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 L+GK IVTGA+AGIGKET R LA A V++A R+T+K +DIR + G G++ VE E++LA SVR FAA+ + LDVLINNA + + +TEDG E TNHLGHFLLT LL+ L+ SAPSRV+ VS+ + GKID D++ +S ++Y+ Y +KL NVLF EL RR + +GV + +LHPG V TE R+ W++ P A LFA+ +GA+T + A E E+ GVYF C P + + D+A A W+ SEE + Sbjct: 8 LDGKTAIVTGANAGIGKETARALAAKGARVILACRDTSKAETAAKDIRETTGNGNVVVE--ELNLASLASVRKFAARIKKRETSLDVLINNAAVSACPKWVTEDGFERQFATNHLGHFLLTNLLLDLLKKSAPSRVVIVSAVLYKRGKIDFDDI-NSEKSYSPHGAYCQSKLANVLFMRELARRLEGTGVTANALHPGVVDTELSRNFSTTLGWIMLLLGPFFTAWVYLFAKTAKQGAETSVHLAVDKELETTSGVYFSDCKPNELAPVGKDDATAKKLWQISEEMV 291
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_024000143.1 (retinol dehydrogenase 12-like [Salvelinus alpinus]) HSP 1 Score: 222.6 bits (566), Expect = 1.800e-54 Identity = 125/288 (43.40%), Postives = 164/288 (56.94%), Query Frame = 0 Query: 29 VNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEW---LIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAINKV 314 V L GK +VTGA+ GIGKET R +A+ A VVMA R+ + + ++IR + G +I V +DLA SVR A ++ S LD+LINNAG++ +TEDG E NHLGHFLLT LL+G L++SAPSRV+ VSS AH GKI D+L + YN +Y +KL NVLF EL RR K +GV S SLHPG ++TE R V W L I A L + +GA+T I A P E G YF CA + D+A+A W++S + + Sbjct: 40 VQLRGKTVLVTGANTGIGKETCRDMARRGARVVMACRDLTRAASAADEIRQATGNSNIVVR--HLDLASMYSVRELAKEFTASEDRLDILINNAGVMMCPKWLTEDGFETQLAVNHLGHFLLTNLLLGKLKSSAPSRVVNVSSIAHKGGKIQFDDLFFAKRPYNSLVSYRQSKLANVLFSRELARRLKGTGVTSYSLHPGVIRTELTRHVETWFPMLRAILSAPSVLLMKTPTQGAQTSIYCAVTPGLEHKSGSYFSDCAMTETAPEGRDDAVAKRLWKESARLVGYI 325
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_005744155.1 (PREDICTED: retinol dehydrogenase 12-like [Pundamilia nyererei]) HSP 1 Score: 222.2 bits (565), Expect = 2.400e-54 Identity = 125/303 (41.25%), Postives = 169/303 (55.78%), Query Frame = 0 Query: 11 IVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPIS---KAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 I +A+ K+ + V L+GK ++TGA+AGIGKET R LA+ A VVMA R+ + E+IR S G G++ + +DLA S+R FA +L+S LD+LINNAG++ +TED E NHLGHFLLT LL+ L++S+PSRV+ VSS AH G+ID D+L S Y +Y +KL N+LF EL RR SGV S SLHPG ++TE R V W + K L + EG +T + A P E + G YF CA K+ D+ +A WE S + Sbjct: 46 ICVAVLRKWIAGGVCRCSVRLDGKTVVITGANAGIGKETSRDLARRGARVVMACRDLTRAERAAEEIRRSTGNGNVVIR--HLDLASTYSIRQFAKDFLDSEERLDILINNAGVMMCPKQLTEDNFETQLAVNHLGHFLLTNLLLPKLKSSSPSRVVNVSSVAHRGGRIDFDDLFFSRRPYGALESYRQSKLANILFSRELARRLSGSGVSSFSLHPGVIRTELGRHVEGWFPLVGLLLKLPSLLLMKTPWEGCQTSLYCAVTPGLEELSGCYFSDCAEKETAPEGQDDVVARKLWEVSTRLV 346
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_008296569.1 (PREDICTED: retinol dehydrogenase 12-like isoform X1 [Stegastes partitus]) HSP 1 Score: 221.5 bits (563), Expect = 4.100e-54 Identity = 127/303 (41.91%), Postives = 171/303 (56.44%), Query Frame = 0 Query: 11 IVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEW---LIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 I +A+ K+ + V L+GK ++TGA+ GIGKET R +AQ A VVMA R+ + E++R S G G++ + +DLA SV+ FA +L+S LD+LINNAG++ +TEDG E NHLGHFLLT LL+ L++SAPSRVI VSS AH G+ID D+L S TY+ +Y +KL NVLF EL R K SGV S SLHPG ++TE R V W L + + L + +G +T + A P E G YF CA K+ D+ A WE+S + Sbjct: 52 ICMAVLRKWIGGGVCRCSVRLDGKTVLITGANTGIGKETSRDMAQRGARVVMACRDLTRAERAAEEVRRSTGNGNVVIR--HLDLASVYSVKQFAKDFLDSEDRLDILINNAGVMMCPKWLTEDGFETQLAVNHLGHFLLTNLLVPKLKSSAPSRVINVSSIAHQGGRIDFDDLFFSRRTYSSLESYRQSKLANVLFSRELACRLKGSGVSSFSLHPGVIRTELGRHVEGWFPLLGMLLRLPSLLLMKTPWQGCQTTVYCAVTPGLEERSGRYFSDCAEKETAPEGRDDVAARRLWEESARLV 352
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_005935948.1 (PREDICTED: retinol dehydrogenase 12-like isoform X1 [Haplochromis burtoni]) HSP 1 Score: 221.1 bits (562), Expect = 5.300e-54 Identity = 124/303 (40.92%), Postives = 169/303 (55.78%), Query Frame = 0 Query: 11 IVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPIS---KAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 I +A+ K+ + V L+G+ ++TGA+AGIGKET R LA+ A VVMA R+ + E+IR S G G++ + +DLA S+R FA +L+S LD+LINNAG++ +TED E NHLGHFLLT LL+ L++S+PSRV+ VSS AH G+ID D+L S Y +Y +KL N+LF EL RR SGV S SLHPG ++TE R V W + K L + EG +T + A P E + G YF CA K+ D+ +A WE S + Sbjct: 79 ICVAVLRKWIAGGVCRCSVRLDGRTVVITGANAGIGKETSRDLARRGARVVMACRDLTRAERAAEEIRRSTGNGNVVIR--HLDLASTYSIRQFAKDFLDSEERLDILINNAGVMMCPKQLTEDNFETQLAVNHLGHFLLTNLLLPKLKSSSPSRVVNVSSVAHRGGRIDFDDLFFSRRPYGALESYRQSKLANILFSRELARRLSGSGVSSFSLHPGVIRTELGRHVEGWFPLVGLLLKLPSLLLMKTPWEGCQTSLYCAVTPGLEELSGCYFSDCAEKETAPEGQDDVVARKLWEVSTRLV 379
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_005935949.1 (PREDICTED: retinol dehydrogenase 12-like isoform X2 [Haplochromis burtoni]) HSP 1 Score: 221.1 bits (562), Expect = 5.300e-54 Identity = 124/303 (40.92%), Postives = 169/303 (55.78%), Query Frame = 0 Query: 11 IVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPIS---KAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 I +A+ K+ + V L+G+ ++TGA+AGIGKET R LA+ A VVMA R+ + E+IR S G G++ + +DLA S+R FA +L+S LD+LINNAG++ +TED E NHLGHFLLT LL+ L++S+PSRV+ VSS AH G+ID D+L S Y +Y +KL N+LF EL RR SGV S SLHPG ++TE R V W + K L + EG +T + A P E + G YF CA K+ D+ +A WE S + Sbjct: 46 ICVAVLRKWIAGGVCRCSVRLDGRTVVITGANAGIGKETSRDLARRGARVVMACRDLTRAERAAEEIRRSTGNGNVVIR--HLDLASTYSIRQFAKDFLDSEERLDILINNAGVMMCPKQLTEDNFETQLAVNHLGHFLLTNLLLPKLKSSSPSRVVNVSSVAHRGGRIDFDDLFFSRRPYGALESYRQSKLANILFSRELARRLSGSGVSSFSLHPGVIRTELGRHVEGWFPLVGLLLKLPSLLLMKTPWEGCQTSLYCAVTPGLEELSGCYFSDCAEKETAPEGQDDVVARKLWEVSTRLV 346
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_015246769.1 (PREDICTED: retinol dehydrogenase 13-like [Cyprinodon variegatus]) HSP 1 Score: 221.1 bits (562), Expect = 5.300e-54 Identity = 125/285 (43.86%), Postives = 163/285 (57.19%), Query Frame = 0 Query: 29 VNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEW---LIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 V L+GK +VTGA+ GIGKET R LA A VVMA R+ + E++R S G G++ + +DLA SV FA +L+S LD+LINNAG++ ITEDG E NHLGHFLLT LL+ L++SAPSRVI VSS AH G+ID D+L S Y+ +Y +KL NVLF EL RR K SGV + LHPG ++TE R V W L + + L + EG++T + A P E + G YF CA K+ D+ A WE+S + Sbjct: 65 VRLDGKTVLVTGANTGIGKETCRDLAGRGARVVMACRDLTRAERAAEEVRHSTGNGNVVIR--HLDLASVYSVSQFAKDFLDSEERLDILINNAGVMMCPRWITEDGFETQLAVNHLGHFLLTNLLLPMLKSSAPSRVINVSSIAHQGGRIDFDDLFFSRRPYSALESYRQSKLANVLFTRELARRLKGSGVSAFCLHPGVIRTELSRHVEGWFPLLGALLRIPAWLLMKTPKEGSQTTVFCAVTPGLEELSGKYFSDCAEKEVAPEGRDDEAAQRLWEESARLV 347
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_019643816.1 (PREDICTED: retinol dehydrogenase 13-like [Branchiostoma belcheri]) HSP 1 Score: 221.1 bits (562), Expect = 5.300e-54 Identity = 121/287 (42.16%), Postives = 171/287 (59.58%), Query Frame = 0 Query: 31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPE----W---LIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 L+GK ++TG +AGIGKET R LA+ A V++A R+ + +IR G G++ VE +++LA SVR FAAK+ LD+LINNAG+++ TEDG E+ TNHLGHFLLT L+ L+ SAPSRV+ V+S H +G I D++ + E+Y YG +KL NVLF EL R+ K +GV + SLHPG + T R + + W + P+ +LF + +GA+T I A + E+ G+YF CAPK+P A DEA+A WE SE+ + Sbjct: 39 LDGKTVVITGGNAGIGKETARDLAKRGARVILACRDPKRAEEAAAEIRKDTGNGNVVVE--KLNLASLNSVREFAAKFNADESRLDILINNAGIMTCPQWRTEDGFEMQFGTNHLGHFLLTNQLLDKLKTSAPSRVVTVASSGHAVGHIHFDDI-NLEESYTPIKAYGQSKLANVLFTKELARKIKGTGVTAYSLHPGGINTGLQRHLGDSYGWWFTLIKPLFAGGLSLFGKTPQQGAQTTIHCAVSEGLETSSGLYFTDCAPKEPIPEAKDEAVAKKLWELSEKMV 322
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_024660086.1 (retinol dehydrogenase 12-like [Maylandia zebra]) HSP 1 Score: 221.1 bits (562), Expect = 5.300e-54 Identity = 124/303 (40.92%), Postives = 169/303 (55.78%), Query Frame = 0 Query: 11 IVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPIS---KAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311 I +A+ K+ + V L+G+ ++TGA+AGIGKET R LA+ A VVMA R+ + E+IR S G G++ + +DLA S+R FA +L+S LD+LINNAG++ +TED E NHLGHFLLT LL+ L++S+PSRV+ VSS AH G+ID D+L S Y +Y +KL N+LF EL RR SGV S SLHPG ++TE R V W + K L + EG +T + A P E + G YF CA K+ D+ +A WE S + Sbjct: 13 ICVAVLRKWIAGGVCRCSVRLDGRTVVITGANAGIGKETSRDLARRGARVVMACRDLTRAERAAEEIRRSTGNGNVVIR--HLDLASTYSIRQFAKDFLDSEERLDILINNAGVMMCPKQLTEDNFETQLAVNHLGHFLLTNLLLPKLKSSSPSRVVNVSSVAHRGGRIDFDDLFFSRRPYGALESYRQSKLANILFSRELARRLSGSGVSSFSLHPGVIRTELGRHVEGWFPLVGLLLKLPSLLLMKTPWEGCQTSLYCAVTPGLEELSGCYFSDCAEKETAPEGQDDVVARKLWEVSTRLV 313 The following BLAST results are available for this feature:
BLAST of NO06G02680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02680 ID=NO06G02680|Name=NO06G02680|organism=Nannochloropsis oceanica|type=gene|length=1780bpback to top protein sequence of NO06G02680.1 >NO06G02680.1-protein ID=NO06G02680.1-protein|Name=NO06G02680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=340bpback to top Synonyms
Publications
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