NO06G02530, NO06G02530 (gene) Nannochloropsis oceanica

Overview
NameNO06G02530
Unique NameNO06G02530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1605
Alignment locationchr6:712447..714051 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:712447..714051 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004040amidase activity
GO:0016787hydrolase activity
GO:0016740transferase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR036928AS_sf
IPR000120Amidase
IPR023631Amidase_dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Homology
BLAST of NO06G02530 vs. NCBI_GenBank
Match: EWM26268.1 (glutamyl-trna amidotransferase subunit a [Nannochloropsis gaditana])

HSP 1 Score: 717.2 bits (1850), Expect = 3.700e-203
Identity = 369/490 (75.31%), Postives = 425/490 (86.73%), Query Frame = 0
Query:   44 SPNSIHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAVREMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPITGGREGESS---LPVGLQIIGQRFAEAQILQVAKALEL 531
            S  +IHD+VE  ++GQ SV  VTK+TL +IE +D A+GAFL LSGD A+++A+ LD KLA ++  T+ +PLLGLP+A+KDNICTAG+PTTA S+VLQGY+PSYDATAV RL+AAG +L+GKTN+DEFGMGSTTESSGYHVTRNPRDL+RSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSR+GL+AYGSSTDVIGPLT  VMD+AR+L+ LAG D  HD TTS AP  +D+V AV+E E +G +PLAG ++ L++ETL +RVE+GV++ V+ AV  LE LGA +MEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRP+ A SAKTVMLGSRG GFGEEVKQRILLGTFSLSAGY+DAYYLKSQQLRSVLS++F  +F  ADVL+ PT+PTVAYPLGKAA SKVDMYADDLFTVPASLAGLPAISLP+       +S   LPVGLQIIGQRFAEA ILQVA+ LEL
Sbjct:   46 SSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGSTTESSGYHVTRNPRDLSRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRHGLLAYGSSTDVIGPLTGTVMDSARLLSALAGADPLHDATTSLAPAAEDYVSAVKEAETRGERPLAGTRIGLIRETLQTRVEDGVSTVVQDAVARLEGLGAEIMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPRDAGSAKTVMLGSRGEGFGEEVKQRILLGTFSLSAGYADAYYLKSQQLRSVLSEAFKSAFETADVLISPTAPTVAYPLGKAAGSKVDMYADDLFTVPASLAGLPAISLPVGKAPSSSASSDFLPVGLQIIGQRFAEASILQVARILEL 535          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: CEM34011.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 448.7 bits (1153), Expect = 2.500e-122
Identity = 259/527 (49.15%), Postives = 351/527 (66.60%), Query Frame = 0
Query:   13 LAVAVHTTTAFHPPPKLRQISRNPSILLSASSPNSIHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAH-DTTTSQAPELQDFVGA-VREMEGKGSKPLAGVKVALVKETL---HSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAE-SAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPITGGREGESSLPVGLQIIGQRFAEAQILQVAKALELAQG 534
            LA  +   +AF   P L +        LSAS   SI    +  R G  +V  V ++TL+R+E  D  V  + ++ G+ AL++A+ LD   A +     + PL GLP+AVKD I    +P T  SRVL+GY+PS+DA  V RLKAAG ++IGKTN DEF MGSTTE+S +  T NP DL+R+PGGSSGGS+A V++G V AALG+DTGGSIRQPASW G VGLKPTYGRVSR GL+AYGSSTD IGP+  +V D A +L  +AG D     +  +  PE    V   +   E    +PL+ +++ L+KETL     R++  V +A + ++++ + LGA ++EV IP L  +CA+YY+ V+SEAS+NLA+YDG+RYGLR    +  AK VM+ SR +GFG+EVKQRILLGTF+LSAGYSDAYY K+Q++R+ L+ +F   F + D L+ PT+PT AY LG+  E+KV+ Y DDL TVPASL+GLPA+S+P     E    LP+GLQI+G+   E ++LQ+    + A G
Sbjct:   25 LAWLLSAASAFRLAPSLLRRHTRSGRPLSAS---SIAQTTKGIRDGTLTVEEVVRDTLRRVEASD--VHGWCSVDGESALSRARELDKGRANEGD---LPPLYGLPIAVKDTISVRDMPCTGGSRVLEGYVPSFDAPCVERLKAAGAVVIGKTNCDEFAMGSTTETSFFEQTVNPFDLSRTPGGSSGGSSAVVSNGEVPAALGSDTGGSIRQPASWCGVVGLKPTYGRVSRRGLLAYGSSTDCIGPMCTSVEDCAILLEAMAGHDPLDVSSLDAPVPEYAKLVDQFLNNKESLSGRPLSKMRIGLLKETLDDGEGRMQPAVMAAFKDSLSVFKALGAELIEVDIPNLKEYCAAYYITVMSEASSNLAKYDGIRYGLRTSSEDPRAKRVMVDSRETGFGQEVKQRILLGTFALSAGYSDAYYKKAQKMRAALASNFERVFELVDALILPTAPTTAYRLGQFKENKVETYIDDLLTVPASLSGLPALSVPCGISAE---DLPIGLQIVGKPLDELRLLQIGAGYDEATG 540          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: PSC74438.1 (glutamyl-tRNA(Gln) amidotransferase subunit chloroplastic mitochondrial [Micractinium conductrix])

HSP 1 Score: 441.4 bits (1134), Expect = 3.900e-120
Identity = 256/523 (48.95%), Postives = 351/523 (67.11%), Query Frame = 0
Query:   15 VAVHTTTAFHPPPK---LRQISRNPSILLSASSPNSIHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAVREMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPI-TGGREGESSLPVGLQIIGQRFAEAQILQVAKALELAQG 534
            V ++T+      PK     + S +  IL SAS   ++   V       AS   VT+  L+ ++  +G + +F++++ + ALAQA+ +D +LA  +    VLPL G+P+A+KDN+CT G PTTA SR L+GY P YDATAV RL+AAG +L+GKTNMDEFGMGS+ E+SG+  T NP D  R PGGSSGGSA+AVA+  V+AALG+DTGGSIRQPAS+ G VG+KPTYGRVSR GL+AY SS D IGP+ Q+V DAA +L+V+AG D A D+T SQ P  +DF   +   E   S PLAG ++A+++ET    V+ GVA+A+   +  L+ LGA V EVS+P       +YYV  LSEAS+NL+RYDGVRYG R + AE  +++   +R  G G EV +RIL+GT++LSAGY DAYY ++QQ+R+++ +  + +    D L+CP +PT AY LG+ +   + MY  DL TV  +LAGLPA+ LP     + G + LPVG+Q+IG+ F EA +LQ+A  LE   G
Sbjct:  486 VDIYTSAYAKTQPKRMFAEEESISMRILASASPLMAVRQSVGK----AASARDVTQSYLRGLQSVEGKLQSFISVNAEDALAQAEAVDRRLAQGE----VLPLAGVPIAIKDNLCTQGQPTTAGSRQLEGYTPPYDATAVARLRAAGAVLLGKTNMDEFGMGSSCENSGFQPTFNPWDTERVPGGSSGGSASAVAANQVVAALGSDTGGSIRQPASFCGVVGVKPTYGRVSRNGLIAYASSLDCIGPMAQSVADAAALLSVIAGPDGA-DSTCSQRPG-EDFAAGLLPAEALTSTPLAGRRLAVIRETSGEGVDAGVAAALDSTIAHLQGLGAEVEEVSLPSFAFGLPAYYVIALSEASSNLSRYDGVRYGRRAQ-AEELRSMYGQTRHEGLGSEVARRILMGTYALSAGYYDAYYKRAQQVRTLIQREMNAALSKYDALLCPAAPTPAYRLGEKSADPLAMYKGDLMTVNLNLAGLPAVCLPCGFADQAGGAKLPVGVQLIGRAFGEADLLQLAHTLEQTAG 997          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: KXZ47016.1 (hypothetical protein GPECTOR_38g252 [Gonium pectorale])

HSP 1 Score: 440.7 bits (1132), Expect = 6.700e-120
Identity = 257/508 (50.59%), Postives = 331/508 (65.16%), Query Frame = 0
Query:   33 SRNPSILLSASSPNSIHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAV---REMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPI--------TGGREGESSLPVGLQIIGQRFAEAQILQVAKALE 530
            S++ + L SA S + I ++ E     Q S   VT+  L  I + D AV +F+ +  + ALAQA+ LD  +A   T   + PL G+PLA+KDNICT G  TTA S++L+ Y+P +DATAV RL+ AG + +GKTNMDEFGMGS+TE+S Y  TRNP D  R PGGSSGGSAAAVA+     ALG+DTGGSIRQPA + G VGLKPTYGRVSRYGL++Y SS D IGP+T  V DAA +L  +AG D  HD T+S     +DF   +    ++ G GS+PLAG ++ LV+ETL   VE  V +AVR A   LE LGA V EVS+P       +YYV  LSEAS+NL+RYDGVRYG R  GA    ++  GSRG G G EVK+RIL+GT++LSAGY DAYY ++QQ+R+++      +    D L+ PT+P  AY LG+ +   + MY  DL TV  +LAGLPAI LP           G  G   LP+G+Q+IG+ F EA +LQ+A A E
Sbjct:   24 SKHTTSLASAKS-SVIREIHEHIVSKQRSAVEVTQHYLDAIGKADSAVCSFITVDAEQALAQARALDAHIASSGT-DGLGPLTGVPLAIKDNICTQGTRTTAGSQILRDYVPPFDATAVARLRGAGAVFVGKTNMDEFGMGSSTENSSYKPTRNPWDPERVPGGSSGGSAAAVAARECAGALGSDTGGSIRQPAHFCGIVGLKPTYGRVSRYGLISYASSLDCIGPMTHTVEDAALLLNAIAGGD-PHDATSS-GRAAEDFAARLLPPEQLGGGGSRPLAGRRIGLVRETLGEGVEPAVEAAVRGAAAHLESLGAVVEEVSLPTFGLGLPAYYVLALSEASSNLSRYDGVRYGARAPGAADLASLYGGSRGGGLGGEVKRRILMGTYALSAGYYDAYYKRAQQVRTLVQSEMGSALERFDALLTPTAPGPAYRLGEKSADPLAMYKGDLMTVNVNLAGLPAIVLPAGYTPAPEPASGGPGHGQLPIGMQLIGRAFDEAGLLQLAHAYE 527          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: OGW39965.1 (aspartyl/glutamyl-tRNA amidotransferase subunit A [Nitrospirae bacterium GWC2_56_14])

HSP 1 Score: 438.7 bits (1127), Expect = 2.500e-119
Identity = 238/485 (49.07%), Postives = 331/485 (68.25%), Query Frame = 0
Query:   47 SIHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAVREMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPITGGREGESSLPVGLQIIGQRFAEAQILQVAKALELA 532
            +IHDL +   +G+ +   +T+  L RI   D  V A++ ++ D A  QAK  D +    D A+   PLLG+PLA+KDN+CT G+ TT AS++L+ +IP YDAT V RLK AG ++ GK NMDEF MGS+TE+SG+  T+NP DL+R PGGSSGGSAAAVA+G  + +LG+DTGGSIRQPA+  G VGLKPTYGRVSR+GL+A+ SS D IGP+T++V D A ++  +AG D   D+T++    + D   A++       K L G+K+ L KE     ++ GV  AV+ A+  L+ LGAT++EVS+P+ D   A+YY+   SEAS+NLARYDG++YG R +GA+    + + SR  GFG EVK+RI+LGT++LSAGY DAYY K QQ R+++ + F E+F V DV+  PT+PT A+ +G+ +   + MY  D+FT+  +LAG+P IS+P   G  GE +LPVGLQ++G  F E  IL+ A A E A
Sbjct:    7 TIHDLHDMLTKGETTSEAITESVLARIAAVDDKVKAYITVTADAARQQAKDADKRRKAGDHAS---PLLGIPLAIKDNMCTEGIATTCASKILKNFIPPYDATVVSRLKQAGAVICGKPNMDEFAMGSSTENSGFFATKNPWDLSRIPGGSSGGSAAAVAAGECIGSLGSDTGGSIRQPAACCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITKDVTDTALIMNAIAGHD-PRDSTSANI-FMPDLTKALK-------KDLQGMKIGLPKEYFIEGMDPGVDKAVKAAMQTLKGLGATLVEVSLPHTDYAVATYYILATSEASSNLARYDGIKYGFRAEGAKDLLDLYMKSRSQGFGPEVKRRIMLGTYALSAGYYDAYYKKGQQARTLIKKDFEEAFKVCDVIATPTAPTAAFKIGEKSSDPLQMYLSDIFTISVNLAGIPGISIPC--GFTGE-NLPVGLQLLGNHFDEEAILRAAFAYEQA 476          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: OGW19011.1 (aspartyl/glutamyl-tRNA amidotransferase subunit A [Nitrospirae bacterium GWC1_57_7] >OGW29484.1 aspartyl/glutamyl-tRNA amidotransferase subunit A [Nitrospirae bacterium GWC2_57_13] >OGW45617.1 aspartyl/glutamyl-tRNA amidotransferase subunit A [Nitrospirae bacterium GWD2_57_8])

HSP 1 Score: 437.6 bits (1124), Expect = 5.700e-119
Identity = 234/485 (48.25%), Postives = 329/485 (67.84%), Query Frame = 0
Query:   47 SIHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAVREMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPITGGREGESSLPVGLQIIGQRFAEAQILQVAKALELA 532
            ++H+L E  ++ + +   +T+  L RI   DG + A++ ++   AL  A+  D  +A +   T   PL G+P+A+KDN+CT GV TT AS++L  ++P YDAT V +L+A G +  GK NMDEF MGS+TE+SGY  TRNP DL R PGGSSGGSAAAVA+G  +AALG+DTGGSIRQPA+  G VGLKPTYGRVSRYGL+A+ SS D IGP+T++V DAA VL  +AG D   D+T++  P + DF  A++       + + G+K+ + KE     ++  V  +VR+AV  LERLGAT +EVS+P+     A+YY+   SEAS+NLARYDGV+YG+R  GA+    + L SR  GFG EV++RI+LGT++LSAGY DAYY K QQ+R+++ + F E+F   D++  PT+PT A+ +G+ +   + MY  D+FT+  +LAG+P IS+P    + G   LP+GLQI+G+ F E  +L+ A A E A
Sbjct:    7 TLHELHEKLKKKEITSRSITESVLGRIRSVDGKIKAYITVADQEALGSAEAADKAMAQQGPRT---PLQGIPVALKDNLCTTGVLTTCASKILGNFVPPYDATVVAKLRAEGAVFCGKANMDEFAMGSSTENSGYFTTRNPWDLDRIPGGSSGGSAAAVAAGECIAALGSDTGGSIRQPAACCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITKDVRDAAIVLNAIAGRD-GRDSTSADIP-VPDFTKALQ-------RDVKGLKIGIPKEYFIEGMDPEVERSVREAVKTLERLGATTVEVSLPHTGYAVATYYILATSEASSNLARYDGVKYGVRADGAKDLLDLYLKSRSRGFGAEVQRRIMLGTYALSAGYYDAYYKKGQQVRTLIKRDFDEAFKTVDIIATPTAPTAAFKIGEKSADPLQMYLSDIFTISVNLAGIPGISIPCGFTKGG---LPIGLQILGRHFDEETVLRAAFAYEQA 476          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: XP_001690552.1 (glutamyl tRNA amidotransferase, subunit A [Chlamydomonas reinhardtii] >PNW77502.1 hypothetical protein CHLRE_10g439400v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 432.2 bits (1110), Expect = 2.400e-117
Identity = 240/498 (48.19%), Postives = 326/498 (65.46%), Query Frame = 0
Query:   40 LSASSPNS-IHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAVREMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLP---ITGGREGESSLPVGLQIIGQRFAEAQILQVAKALELAQG 534
            ++ASS  S I ++ E     + S   VT++ L  I + D  V +++ + G+ ALAQA+ +D ++A  +T   + PL G+PLA+KDNICT+G  TTA S++L+ Y+P++DATAV RL+ AG + +GKTNMDEFGMGS+TE+S +  TRNP D  R PGGSSG     VA+    AALG+DTGGSIRQPA + G VGLKPTYGRVSRYGL++Y SS D IGP+   V DAA +L+ +AG D +HD T+S  P +    G    +   GS+PLAG ++ LV +T+   V   +  AVR A   LE LGATV EVS+P       +YYV  LSEAS+NL+RYD VRYG R   A    ++  GSR  G G EVK+RIL+GT++LSAGY DAYY ++QQ+R+++ Q    + G  D L+ P +P+ AY LG+ +   + MY  DL TV  +LAGLPA+ LP   + G  EG + LP+GLQ++G+ F EA +L +  A E   G
Sbjct:   28 VAASSKQSVIREIHEQLSNKKRSAVEVTQQYLDAIARTDSTVCSYITVDGEQALAQARAVDARIAAGET---LGPLAGVPLAIKDNICTSGTRTTAGSQILRDYVPNFDATAVSRLRGAGAVFLGKTNMDEFGMGSSTENSSFKPTRNPWDAERVPGGSSGXXXXXVAAHECAAALGSDTGGSIRQPAHFCGIVGLKPTYGRVSRYGLISYASSLDCIGPMAHTVEDAALLLSGIAGGD-SHDATSSGRPVVDFAAGLATGLAAGGSRPLAGKRIGLVAQTMGEGVAPAIDEAVRAAARHLESLGATVEEVSLPTFGQGLPAYYVLALSEASSNLSRYDSVRYGARSPAATDLASLFAGSRAEGLGGEVKRRILMGTYALSAGYYDAYYKRAQQVRTLVQQEMVAALGRCDALLSPAAPSAAYKLGEKSSDPLAMYKGDLMTVNVNLAGLPALVLPAGFVPGSAEGGAELPIGLQLVGRAFDEAGLLGLGYAYEQTAG 521          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: WP_012627965.1 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [Cyanothece sp. PCC 7425] >B8HY89.1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A >ACL44892.1 glutamyl-tRNA(Gln) amidotransferase, A subunit [Cyanothece sp. PCC 7425])

HSP 1 Score: 429.9 bits (1104), Expect = 1.200e-116
Identity = 235/486 (48.35%), Postives = 321/486 (66.05%), Query Frame = 0
Query:   47 SIHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTS-QAPELQDFVGAVREMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPITGGREGESSLPVGLQIIGQRFAEAQILQVAKALELA 532
            SI +L +     + S   +T++ L++I+Q +  V AFL L+ + ALAQA+ +D ++A   T T +  L G+P+A+KDN+CT G+PTT  S++LQG+IP Y++T   RL AAG +++GKTN+DEF MGS+TE+S Y +T NP DL R PGGSSGGSAAAVA+G  L ALG+DTGGSIRQPAS+ G VGLKPTYG VSRYGL+AY SS D IGP   NV DAA +L  +AG D    T+ +   P+   F+  + +++GK        K+ +++ET    ++  V     KA+  LE LGA V E+S P       +YY+   SEASANLARYDGV+YG R    E+  ++   +R  GFG EVK+RI++GT++LSAGY DAYYLK+Q++R+++ Q F  +F   DVLVCPT+PT A+  G      + MY  DL T+P +LAGLP +SLP    ++G   LP+GLQ+IG    E  + QVA A E A
Sbjct:    3 SIRELHQQLVSKERSAKEITQDALEKIQQLEPKVHAFLTLTAEQALAQAERVDQQIA---TGTEIGLLAGIPIAIKDNLCTKGIPTTCGSKILQGFIPPYESTVTSRLAAAGAVMVGKTNLDEFAMGSSTENSAYQLTANPWDLQRVPGGSSGGSAAAVAAGETLIALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPFATNVEDAALLLGAIAGHDPQDSTSLNVPIPDYTQFL--IPDLKGK--------KIGIIQETYGEGLDPQVEQVTHKAIQQLEELGAEVREISCPRFRYGLPTYYIIAPSEASANLARYDGVKYGFRSPDPENLLSMYTRTRAEGFGPEVKRRIMIGTYALSAGYYDAYYLKAQKVRTLIKQDFEAAFEQVDVLVCPTAPTTAFAAGAKTADPLSMYLSDLMTIPVNLAGLPGLSLPCGFDQQG---LPIGLQLIGNVLREDLVFQVAYAYEQA 472          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: PDO11501.1 (aspartyl/glutamyl-tRNA amidotransferase subunit A [Paenibacillaceae bacterium JTherm])

HSP 1 Score: 429.5 bits (1103), Expect = 1.500e-116
Identity = 249/481 (51.77%), Postives = 325/481 (67.57%), Query Frame = 0
Query:   55 FRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAVREMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLP--ITGGREGESSLPVGLQIIGQRFAEAQILQVAKALELAQG 534
            F + + SV+ +     +RI   DG +GAFL L  + A A+AK LD  LA   +  A   L GLP  +KDNI T G+ TT AS++L  YIP Y+ATAV RL+AA  + IGK N+DEF MGS+ E+S ++ TRNP DL R PGGSSGG AAAVA+GMV  ALG+DTGGSIRQPA+  G VGLKPTYG VSR+GL+A+ SS D IGP+T+ V DAA VL  +AG D   D+T++  P + D+ GA+       +  + G++VA+ KE     ++EGV S VR+A+  LE+LGA V EVS+P+ +   A+YY+   SEAS+NLAR+DGVRYG+R   A     V L SR  GFG EVK+RI+LGTF+LSAGY DAYYLK+Q++R+++ Q F   F   DV+V PTSPT A+ LG+  E  + MY +D+ T+P SLAG+PAIS+P    GG      LPVGLQIIG+ F E  +L++A A E   G
Sbjct:   15 FSKKECSVSDLVDAAFRRIAVLDGRIGAFLTLDEERARAKAKRLDDALA---SGEADGLLFGLPAGIKDNIVTRGLRTTCASKILANYIPIYNATAVDRLEAANAVTIGKLNLDEFAMGSSNENSAFYPTRNPWDLERVPGGSSGGPAAAVAAGMVRFALGSDTGGSIRQPAALCGIVGLKPTYGLVSRFGLVAFASSLDQIGPMTRTVEDAAAVLQAIAGHD-PMDSTSADVP-VPDYAGAL-------TGDIRGLRVAVPKEYFGEGIDEGVKSCVREALRALEQLGAAVGEVSLPHTEYAVATYYLIASSEASSNLARFDGVRYGVRSPNAADLAEVYLKSRSEGFGPEVKRRIMLGTFALSAGYYDAYYLKAQRVRTLIRQDFDRVFESFDVIVGPTSPTTAFKLGEKIEDPLQMYMNDVLTIPVSLAGVPAISVPCGFAGG------LPVGLQIIGKPFDEPTVLRIAHAYEQHAG 477          
BLAST of NO06G02530 vs. NCBI_GenBank
Match: GBD08167.1 (Glutamyl-tRNA(Gln) amidotransferase subunit A [bacterium HR22])

HSP 1 Score: 429.5 bits (1103), Expect = 1.500e-116
Identity = 246/487 (50.51%), Postives = 330/487 (67.76%), Query Frame = 0
Query:   47 SIHDLVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDTKLA--MKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATAVVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGGSAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYGSSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAVREMEGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVSIPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRGSGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADVLVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPITGGREGESSLPVGLQIIGQRFAEAQILQVAKALELA 532
            +IH+ +E  R+G+ S   VT+  L RIE  D  + A+L ++ D ALAQA+  D + A   +D AT + PL G+PLA+KD IC  GV  T  SR+L+ ++P Y+ATAV RL+ AG + +GKTN DEF MGS+TE+S +  TRNP DL R PGGSSGGSAAAVA+ +   ALGTDTGGS+RQPA+  G VGLKPTYGRVSRYGL+AYGSS D IGP+T++V DAA +L  +AG D   D T+  AP + D+  A+          L G++V +  E     ++  V  AVR+A+ +L  LGA VMEVS+P+      +YY+   +EASANLARYDGV+YGLR +G     T  L +RG GFG EVK+RI+LGT++LSAGY DAYYLK+Q++R+++ + F ++F   DV+VCPTSPT A+ LG+     + MY  D+FT+ A+LAG+  IS+P     +G   LP+GLQI+G    E +IL+VA A E A
Sbjct:    7 TIHETLEHLRQGKISAVEVTEAYLARIEALDPILHAYLTVTPDLALAQAREADERWAAWRRDPATPLPPLNGIPLAIKDVICVQGVRCTCGSRILENFVPPYEATAVARLREAGAVFLGKTNTDEFAMGSSTENSAFGPTRNPWDLERVPGGSSGGSAAAVAADLCAGALGTDTGGSVRQPAALCGVVGLKPTYGRVSRYGLVAYGSSLDQIGPITKDVWDAAILLQWMAGHD-PRDATSWSAP-VPDYTRAL-------IPDLKGMRVGVPPEYFTPGMQPEVERAVREAIEVLAELGAEVMEVSLPHTAYALPTYYMIAPAEASANLARYDGVKYGLRIQGETIWDTYRL-TRGRGFGPEVKRRIMLGTYALSAGYYDAYYLKAQKVRTLIRRDFEQAFEKVDVIVCPTSPTTAFRLGERTSDPLQMYLADIFTITANLAGICGISIPCGFDSQG---LPIGLQILGPALGEEKILRVAYAYEQA 480          
The following BLAST results are available for this feature:
BLAST of NO06G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26268.13.700e-20375.31glutamyl-trna amidotransferase subunit a [Nannochl... [more]
CEM34011.12.500e-12249.15unnamed protein product [Vitrella brassicaformis C... [more]
PSC74438.13.900e-12048.95glutamyl-tRNA(Gln) amidotransferase subunit chloro... [more]
KXZ47016.16.700e-12050.59hypothetical protein GPECTOR_38g252 [Gonium pector... [more]
OGW39965.12.500e-11949.07aspartyl/glutamyl-tRNA amidotransferase subunit A ... [more]
OGW19011.15.700e-11948.25aspartyl/glutamyl-tRNA amidotransferase subunit A ... [more]
XP_001690552.12.400e-11748.19glutamyl tRNA amidotransferase, subunit A [Chlamyd... [more]
WP_012627965.11.200e-11648.35Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCA... [more]
PDO11501.11.500e-11651.77aspartyl/glutamyl-tRNA amidotransferase subunit A ... [more]
GBD08167.11.500e-11650.51Glutamyl-tRNA(Gln) amidotransferase subunit A [bac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000207NSK000207Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02530.1NO06G02530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|651539gene_6572Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100145g14gene4257Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02530.1NO06G02530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02530 ID=NO06G02530|Name=NO06G02530|organism=Nannochloropsis oceanica|type=gene|length=1605bp
ATGCGTCCATCACTTTATCCACGACTCCTGCTTTTCCTTGCCGTCGCCGT
CCACACGACAACCGCCTTCCACCCTCCACCAAAACTCCGCCAGATTTCAA
GAAATCCTTCGATCCTCCTCTCTGCTTCCTCCCCCAACTCCATCCATGAT
CTAGTCGAGAGTTTCCGCCGAGGCCAAGCGAGCGTCACCGGCGTAACCAA
GGAAACCTTGCAGCGGATCGAGCAACAAGACGGGGCAGTAGGGGCCTTTC
TCGCCTTGAGTGGAGATCACGCCCTCGCGCAAGCGAAAATACTCGACACT
AAACTTGCCATGAAGGATACAGCTACCGCGGTATTGCCCTTATTAGGCCT
ACCCTTGGCAGTCAAGGATAACATCTGTACCGCGGGCGTTCCCACTACTG
CAGCCTCCCGTGTCTTGCAAGGCTACATCCCATCCTACGACGCTACAGCC
GTCGTCCGCCTCAAGGCCGCCGGCTGCATATTGATTGGAAAGACAAACAT
GGACGAGTTCGGAATGGGCTCCACGACGGAATCCTCTGGTTATCACGTCA
CGCGCAACCCTCGCGACCTCACCCGTTCTCCCGGTGGTTCCTCTGGAGGC
TCGGCCGCAGCGGTGGCAAGTGGCATGGTGCTCGCCGCACTAGGCACGGA
CACAGGGGGGTCGATTCGACAGCCCGCATCGTGGACGGGGACGGTAGGAT
TGAAGCCTACGTATGGGAGAGTGTCAAGGTACGGGTTGATGGCGTATGGG
TCGAGTACGGATGTGATAGGTCCCTTGACACAAAATGTAATGGATGCTGC
TCGAGTGCTTGCCGTGCTTGCAGGTGAGGATCATGCGCACGATACTACCA
CGAGTCAAGCGCCTGAGTTGCAGGATTTTGTGGGGGCTGTGCGGGAGATG
GAGGGGAAGGGAAGTAAGCCACTAGCTGGGGTGAAGGTGGCATTGGTGAA
GGAAACACTGCACAGTAGGGTGGAGGAGGGAGTGGCATCGGCGGTACGAA
AGGCGGTGAATCTGCTGGAGCGATTGGGAGCGACAGTGATGGAGGTGTCG
ATTCCTTATTTAGACGCGCATTGTGCTTCCTACTATGTGAATGTGTTGTC
GGAGGCCAGTGCGAATCTGGCGCGGTACGACGGGGTGCGGTATGGGTTGA
GGCCAAAGGGGGCAGAGAGCGCCAAGACGGTCATGTTGGGGAGTAGAGGA
AGCGGATTTGGGGAGGAGGTAAAGCAGAGAATATTGCTGGGGACGTTCTC
GTTGAGCGCCGGTTATTCAGACGCGTACTATTTGAAGAGCCAGCAGTTGC
GGTCGGTTTTGTCGCAGTCATTCAGCGAGAGTTTTGGGGTGGCGGATGTG
TTGGTGTGTCCGACATCGCCGACAGTGGCGTATCCATTGGGGAAGGCGGC
GGAAAGTAAGGTTGATATGTATGCAGACGATTTGTTCACGGTCCCTGCCA
GCCTGGCGGGACTGCCGGCAATCAGCTTACCTATCACGGGAGGGAGGGAG
GGGGAGTCGTCGCTTCCGGTGGGATTGCAAATTATCGGGCAGCGATTTGC
TGAAGCACAAATTTTGCAGGTGGCAAAGGCACTAGAACTGGCGCAAGGGA
GCTAG
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protein sequence of NO06G02530.1

>NO06G02530.1-protein ID=NO06G02530.1-protein|Name=NO06G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp
MRPSLYPRLLLFLAVAVHTTTAFHPPPKLRQISRNPSILLSASSPNSIHD
LVESFRRGQASVTGVTKETLQRIEQQDGAVGAFLALSGDHALAQAKILDT
KLAMKDTATAVLPLLGLPLAVKDNICTAGVPTTAASRVLQGYIPSYDATA
VVRLKAAGCILIGKTNMDEFGMGSTTESSGYHVTRNPRDLTRSPGGSSGG
SAAAVASGMVLAALGTDTGGSIRQPASWTGTVGLKPTYGRVSRYGLMAYG
SSTDVIGPLTQNVMDAARVLAVLAGEDHAHDTTTSQAPELQDFVGAVREM
EGKGSKPLAGVKVALVKETLHSRVEEGVASAVRKAVNLLERLGATVMEVS
IPYLDAHCASYYVNVLSEASANLARYDGVRYGLRPKGAESAKTVMLGSRG
SGFGEEVKQRILLGTFSLSAGYSDAYYLKSQQLRSVLSQSFSESFGVADV
LVCPTSPTVAYPLGKAAESKVDMYADDLFTVPASLAGLPAISLPITGGRE
GESSLPVGLQIIGQRFAEAQILQVAKALELAQGS*
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Synonyms
Publications