NO06G02250, NO06G02250 (gene) Nannochloropsis oceanica

Overview
NameNO06G02250
Unique NameNO06G02250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1729
Alignment locationchr6:654905..656633 -

Link to JBrowse

Properties
Property NameValue
DescriptionHeat shock protein Hsp33
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:654905..656633 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR016154Heat_shock_Hsp33_C
IPR016153Heat_shock_Hsp33_N
IPR000397Heat_shock_Hsp33
Homology
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_013900488.1 (putative chaperonin [Monoraphidium neglectum] >KIZ01469.1 putative chaperonin [Monoraphidium neglectum])

HSP 1 Score: 183.7 bits (465), Expect = 1.200e-42
Identity = 104/299 (34.78%), Postives = 175/299 (58.53%), Query Frame = 0
Query:  123 QDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSA----EKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIE 418
            +DV + +LSQ G V V  +   N+V   K +   +  AT  LGR ++  +L+A+  KD+E +Q++F GDG   GV AI+D   +V+  +GNS+ D    P+  K  +  AVG+G L VV++HP    PY G+V+I SGE+A D+A Y+A SEQ N+AL +G+ ++    +V +AGG+ V+++P   EE++ ++E NL+ +      + +G         TP  +   +LDG+G + A  ++      C A    +++ RA++ LG +EV  I+ ++G I+ +CE C E Y  T E++++
Sbjct:   22 EDVLLRSLSQLGEVAVLAVDGTNLVADAKRRHSTAPTATAALGRTLMGALLMASFRKDDEAVQVSFKGDGVLGGVFAIADTRGHVKGKVGNSNADPPLRPDG-KLAVGDAVGEGVLSVVRSHPLQPQPYTGMVKIVSGEIAEDLATYMAESEQTNSALALGVAIN-RDCSVNAAGGYLVQVLPFCSEETLEQLEKNLSSLPSVTKLLQSG--------ATPQDITDRILDGIGTAGAPLAITPKYGPCEADALKDRMKRAVASLGPKEVRSIIEEQGKIEVRCELCNEAYHFTEEEVLD 310          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_001700446.1 (heat shock protein 33 [Chlamydomonas reinhardtii] >AAL13317.1 MT4 [Chlamydomonas reinhardtii])

HSP 1 Score: 181.4 bits (459), Expect = 6.000e-42
Identity = 105/297 (35.35%), Postives = 175/297 (58.92%), Query Frame = 0
Query:  123 QDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAE----KVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQL 416
            +D  + +LS+   V+V V+    +V   K + +L+  AT  +GR +L  +L+ +  K++E +Q+TF G+G A  ++AI+D   NV+  I N   D    P+  K ++  AVG+G L VV++HP    PY G+V I SGEVA D+A YL  SEQ N+ALG+G+ +D    NV SAGG+ V+++P   EE+++++E NL  +     S+ A     L E ++P  + + +L GLGV   +E +      C  E    ++ RA++ LG++EV DI+A+EG ++  C+ C + Y  ++ ++
Sbjct:   37 EDYLLRSLSEGAEVSVLVVDGTQLVAEAKRRHKLAPTATAAMGRTLLGALLMGSFRKEDEQVQITFQGNGPAGSILAIADTRGNVKGKINNPAADPPLRPDG-KLNVGGAVGQGVLAVVRSHPLEPQPYTGMVPIVSGEVAEDLANYLVDSEQTNSALGLGVALD-RDCNVKSAGGWLVQILPFCSEETLVQLEQNLTTMP----SITA----MLNEGMSPEAVTERILQGLGVMPGAERVVPKYGPCEEETLKKRMIRAVASLGKKEVADIIAQEGKLEVTCDLCQQTYNFSQGEV 323          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: PNW70318.1 (hypothetical protein CHLRE_17g715000v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 181.4 bits (459), Expect = 6.000e-42
Identity = 105/297 (35.35%), Postives = 175/297 (58.92%), Query Frame = 0
Query:  123 QDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAE----KVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQL 416
            +D  + +LS+   V+V V+    +V   K + +L+  AT  +GR +L  +L+ +  K++E +Q+TF G+G A  ++AI+D   NV+  I N   D    P+  K ++  AVG+G L VV++HP    PY G+V I SGEVA D+A YL  SEQ N+ALG+G+ +D    NV SAGG+ V+++P   EE+++++E NL  +     S+ A     L E ++P  + + +L GLGV   +E +      C  E    ++ RA++ LG++EV DI+A+EG ++  C+ C + Y  ++ ++
Sbjct:   10 EDYLLRSLSEGAEVSVLVVDGTQLVAEAKRRHKLAPTATAAMGRTLLGALLMGSFRKEDEQVQITFQGNGPAGSILAIADTRGNVKGKINNPAADPPLRPDG-KLNVGGAVGQGVLAVVRSHPLEPQPYTGMVPIVSGEVAEDLANYLVDSEQTNSALGLGVALD-RDCNVKSAGGWLVQILPFCSEETLVQLEQNLTTMP----SITA----MLNEGMSPEAVTERILQGLGVMPGAERVVPKYGPCEEETLKKRMIRAVASLGKKEVADIIAQEGKLEVTCDLCQQTYNFSQGEV 296          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_002952668.1 (hypothetical protein VOLCADRAFT_62890 [Volvox carteri f. nagariensis] >EFJ46221.1 hypothetical protein VOLCADRAFT_62890 [Volvox carteri f. nagariensis])

HSP 1 Score: 179.5 bits (454), Expect = 2.300e-41
Identity = 102/296 (34.46%), Postives = 173/296 (58.45%), Query Frame = 0
Query:  124 DVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAE----KVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQL 416
            DV + +LS N  V+V V+    +V   + + +L+  AT  LGR +L  +L+ +  K++E +Q+TF GDG+A  ++AI+D   NV+  + N   D    P+  K ++ +AVGKG L VV++HP    PY G+V I SGEVA D+A YL  SEQ N+ALG+G+ +D     V SAGG+ V+++P   EE++ ++E NL  +      ++ G        ++   +   +LDGLGV    +++      C  E    ++ RA++ LG++EV DI+ +EG ++  C+ C + Y+ +++++
Sbjct:   36 DVLLRSLSTNAEVSVLVVDGTKLVSEAQVRHKLAPTATAALGRSLLGALLMGSFRKEDEQVQITFQGDGEAGSILAIADTRGNVKGKVNNPAADPPLRPDG-KLNVGAAVGKGVLAVVRSHPLEPQPYTGMVPIVSGEVAEDLANYLVDSEQTNSALGLGVSLD-RDCRVKSAGGWLVQILPFCSEETLAQLEQNLTTMPTITTMLNDG--------MSVQDITARILDGLGVLPDGQTVMPKYGPCEEEALKKRMIRAVAALGKQEVADIIKQEGKLEVTCDLCQQTYQFSQQEI 321          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: CEM01924.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 178.3 bits (451), Expect = 5.100e-41
Identity = 102/305 (33.44%), Postives = 174/305 (57.05%), Query Frame = 0
Query:  124 DVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWI-GNSDLDDLRDPE-TLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGV--SMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTRE---QLIELREQ 422
            D  +SALS +G + V+ +SA+N+VQ    + +LS V  + LG V +  +L+A+G+KD E LQLT  G+G   G+ +I+DG  +V+A + G+      +D   + +  I+  +G+G +Q+V++HP W  P+  + EI +  +  +VAF L  +EQR +A+  G++V      V +A G+YVE +P   EE++ +VE NL  +K    S         +  +T   LV  +L+G+GV     S   P+Y+C+CS E+    L  L   E+E I+ K+ +++  C FC E Y ++ +   +L+++ EQ
Sbjct:   14 DTLVSALSADGGIVVRAVSARNLVQDALIRLQLSPVPAQALGEVAVCNLLLASGLKDREQLQLTIAGNGPISGITSIADGHGDVKAMLQGDRKFTGQQDASGSREKSIRRGIGRGQIQLVRSHPDWIQPFQSITEIRNVSIPINVAFALLETEQRTSAIDAGVEVS--GALVQAAAGYYVERLPDASEETLQRVEENLKGLKNDSLST------LFRSGLTAPDLVDRILEGVGVMHGTYSTGAPSYKCSCSPERFLYRLKALPRPELEQIILKQEILEMTCAFCGEVYHISWDRVRKLLDISEQ 310          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_005712914.1 (oxidative stress-dependent heat shock protein 33, GWD [Chondrus crispus] >CDF33111.1 oxidative stress-dependent heat shock protein 33, GWD [Chondrus crispus])

HSP 1 Score: 176.0 bits (445), Expect = 2.500e-40
Identity = 117/327 (35.78%), Postives = 171/327 (52.29%), Query Frame = 0
Query:   89 RRFMTSPPTHANAGSDDFVPIEPATLNWEKVGPDQDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLD-DLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAK--CEFCAERYELTR 413
            RR    P   A A ++D  P E   L     G   D  +  +S  G V+ +V+S   +V         + VA+   GR +   +L++ G KD ETLQL F G G  KG+ AIS+G+  VR ++GNS +   LR+    + D+ +A+GKG L VV+N P  + PY G+V+I+SGEVA D+A YLA SEQ  +ALG G+ +    G V +AGG+ V+++PG  E +   VE N+  I      V AG         TP ++V  L+  L     +   P Y C C  ++V R ++L+ E EV  +L  +G I+ K     C+E   L R
Sbjct:   77 RRPKRRPTFRACAPTEDTPPFEALFLKGPVPG---DRIVRTISATGEVSCRVVSCTGLVSGATRLHRTTPVASTAFGRALTCALLLSAGKKDGETLQLEFRGAGPIKGITAISNGSGEVRGYVGNSAVSVPLRNG---RVDVSAAIGKGVLAVVRNTPFSKQPYTGLVQISSGEVAEDLAKYLAESEQTPSALGAGIYLGE-GGAVTAAGGYLVQLLPGASERTAEIVERNVRAIGTPTELVRAG--------CTPDEIVDNLMKDLSPIKVASVSPRYCCHCGVDRVKRTVALIPELEVRQLLQDQGKIEGKLTVRVCSELGALFR 388          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_005793526.1 (hypothetical protein EMIHUDRAFT_317418 [Emiliania huxleyi CCMP1516] >EOD41097.1 hypothetical protein EMIHUDRAFT_317418 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 174.5 bits (441), Expect = 7.300e-40
Identity = 106/297 (35.69%), Postives = 167/297 (56.23%), Query Frame = 0
Query:  128 SALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVV--KNHPSWRIP--YNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIELRE 421
            +A+S +G ++ K +    +V      + L  +A   LGR +  T+LVA+G+KDEET Q+TFNGDG  +GVMA ++G    R ++GN  +  L      K D+   VGKG+LQVV  K+ P   +P  Y+ + EI +GE+  D+ ++L  SEQR  AL  G+ V  +   V + GG+YV+++P   EES++++E N+A +  R           ++E + P ++V +LLDGL    A +            +V R ++L+  EE+E++L    VI+A+CEFC   Y  T E+L E  E
Sbjct:    3 TAVSADGSISAKAVVTTPLVAEATRLQGLGMLAAAALGRALTCTLLVADGLKDEETFQVTFNGDGPLRGVMATANGKLESRGYVGNPAV-TLPPTGAGKLDVGGGVGKGSLQVVRQKHLPGADLPSQYSSITEIRTGEIPEDINYFLLESEQRQGALAAGVFVAGV--RVDAGGGWYVQLLPFAAEESIVRLEENIAKLASR------SPTSLVREGLGPREIVDLLLDGLEPVFADD---------KPARVLRTMALIPREELEEMLTSNEVIEARCEFCGTLYRSTPEELREKLE 281          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: EFJ07312.1 (hypothetical protein SELMODRAFT_186164 [Selaginella moellendorffii])

HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39
Identity = 104/302 (34.44%), Postives = 167/302 (55.30%), Query Frame = 0
Query:  124 DVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEP---ITPYKLVKMLLDGLGVSMASESLPTYRCTCSAE----KVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIEL 419
            D  +  +S+N  V+V  I  K++VQ  + + + S  A+  LGR +L T+LVA+   D ET+Q++F G G    +  ++  +  V+ ++ N  L DL      K D+ +AVG G L VV+NHP W+ PY G   I SGEVA D+A YLA SEQ NTALG+G+      G V +A G+ V+ +P   EE++ ++E N+A             + +L +P   +T  +++  LL+G+G    S+ +      C  +    ++ RA++ LG  +V ++L++ G ++ KCEFCAE      E L E+
Sbjct:   11 DQILRCVSKNAEVSVLSIVGKHLVQEAQRRHQTSPTASAALGRALLGTLLVASLKDDAETVQISFLGRGPLGQMTTVASQSKLVKGFVSN-PLCDLPLTPQGKLDVGTAVGAGALNVVRNHPRWKQPYTGSTPIYSGEVAEDIARYLAESEQINTALGIGVAFS-TQGTVKAARGYLVQALPFCSEETLTRLEKNVA------------SMHSLSDPSLDMTAREMITRLLEGIGTDSFSDPVFPEFGPCGVDDLKPRMIRAVASLGASDVRELLSENGYVEVKCEFCAETVRFVEEDLKEI 298          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_002991558.2 (uncharacterized protein LOC9632366 [Selaginella moellendorffii])

HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39
Identity = 104/302 (34.44%), Postives = 167/302 (55.30%), Query Frame = 0
Query:  124 DVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEP---ITPYKLVKMLLDGLGVSMASESLPTYRCTCSAE----KVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIEL 419
            D  +  +S+N  V+V  I  K++VQ  + + + S  A+  LGR +L T+LVA+   D ET+Q++F G G    +  ++  +  V+ ++ N  L DL      K D+ +AVG G L VV+NHP W+ PY G   I SGEVA D+A YLA SEQ NTALG+G+      G V +A G+ V+ +P   EE++ ++E N+A             + +L +P   +T  +++  LL+G+G    S+ +      C  +    ++ RA++ LG  +V ++L++ G ++ KCEFCAE      E L E+
Sbjct:   38 DQILRCVSKNAEVSVLSIVGKHLVQEAQRRHQTSPTASAALGRALLGTLLVASLKDDAETVQISFLGRGPLGQMTTVASQSKLVKGFVSN-PLCDLPLTPQGKLDVGTAVGAGALNVVRNHPRWKQPYTGSTPIYSGEVAEDIARYLAESEQINTALGIGVAFS-TQGTVKAARGYLVQALPFCSEETLTRLEKNVA------------SMHSLSDPSLDMTAREMITRLLEGIGTDSFSDPVFPEFGPCGVDDLKPRMIRAVASLGASDVRELLSENGYVEVKCEFCAETVRFVEEDLKEI 325          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_002971735.1 (uncharacterized protein LOC9640261 [Selaginella moellendorffii] >EFJ27484.1 hypothetical protein SELMODRAFT_412307 [Selaginella moellendorffii])

HSP 1 Score: 172.6 bits (436), Expect = 2.800e-39
Identity = 104/302 (34.44%), Postives = 166/302 (54.97%), Query Frame = 0
Query:  124 DVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEP---ITPYKLVKMLLDGLGVSMASESLPTYRCTCSAE----KVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIEL 419
            D  +  +S+N  V+V  I   ++VQ  + + + S  A+  LGR +L T+LVA+   D ET+Q++F G G    +  ++  +  V+ ++ N  L DL      K D+ +AVG G L VV+NHP W+ PY G   I SGEVA D+A YLA SEQ NTALG+G+      G V +A G+ V+ +P   EE++ ++E N+A             + +L +P   +T  +++  LL+G+G    S+ +      C  E    ++ RA++ LG  +V ++L++ G ++ KCEFCAE      E L E+
Sbjct:   38 DQILRCVSKNAEVSVLSIVGNHLVQEAQRRHQTSPTASAALGRALLGTLLVASLKDDAETVQISFLGRGPLGQMTTVASQSKLVKGFVSN-PLCDLPLTSQGKLDVGTAVGAGALNVVRNHPRWKQPYTGSTPIYSGEVAEDIARYLAESEQINTALGIGVAFS-TQGTVKAARGYLVQALPFCSEETLTRLEKNVA------------SMHSLSDPSLDMTAREMITRLLEGIGTDSFSDPVFPEFGPCGVEDLKPRMIRAVASLGASDVRELLSENGYVEVKCEFCAETVRFVEEDLKEI 325          
The following BLAST results are available for this feature:
BLAST of NO06G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_013900488.11.200e-4234.78putative chaperonin [Monoraphidium neglectum] >KIZ... [more]
XP_001700446.16.000e-4235.35heat shock protein 33 [Chlamydomonas reinhardtii] ... [more]
PNW70318.16.000e-4235.35hypothetical protein CHLRE_17g715000v5 [Chlamydomo... [more]
XP_002952668.12.300e-4134.46hypothetical protein VOLCADRAFT_62890 [Volvox cart... [more]
CEM01924.15.100e-4133.44unnamed protein product [Vitrella brassicaformis C... [more]
XP_005712914.12.500e-4035.78oxidative stress-dependent heat shock protein 33, ... [more]
XP_005793526.17.300e-4035.69hypothetical protein EMIHUDRAFT_317418 [Emiliania ... [more]
EFJ07312.12.100e-3934.44hypothetical protein SELMODRAFT_186164 [Selaginell... [more]
XP_002991558.22.100e-3934.44uncharacterized protein LOC9632366 [Selaginella mo... [more]
XP_002971735.12.800e-3934.44uncharacterized protein LOC9640261 [Selaginella mo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000235NSK000235Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02250.1NO06G02250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597290gene_6541Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100025g51gene4285Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02250.1NO06G02250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02250 ID=NO06G02250|Name=NO06G02250|organism=Nannochloropsis oceanica|type=gene|length=1729bp
AACACAAGCACAGAGATGAAGGACACGAGATCCCTTACCTTCTTTTTCGC
TCCCTTCCGTTGGTATTCCCTATCTTTGTGTTGTTGTTGCCTGTTGCTCT
TCCCGACCATGCTTTCCGCCTTGATCACCACGACCTCCCGCCTCCGGCCC
AACTTGAGCGGCCGCCGCGCGTTGACTACGACCACCAGCATGCGCGCTGG
AATTGGTGGAGGCTATAACAATCAGTCGTACCAGTACCGTCGCAATGTGC
AGCGGCCTACGCCTCGGGGCCCGGCCTTCCGGCGCTTCATGACCAGTCCC
CCCACTCATGCCAATGCCGGCAGCGATGACTTCGTGCCCATCGAGCCTGC
GACTCTGAATTGGGAAAAGGTTGGCCCGGACCAAGATGTATTTATAAGTG
CCTTGTCGCAAAATGGCCATGTAAATGTGAAGGTTATCTCGGCTAAGAAC
ATGGTGCAGGCCATAAAGGAAAAGAGGGAGTTGTCAGGAGTCGCCACGGA
GCTCCTTGGGCGAGTCATGCTTAGCACGATGCTGGTGGCCAACGGCATCA
AGGACGAAGAGACCTTGCAGCTCACTTTCAACGGTGATGGGCAAGCCAAG
GGAGTCATGGCCATTTCGGACGGAGCATGCAACGTCCGTGCGTGGATTGG
TAATAGCGACTTGGATGATTTACGGGACCCCGAAACACTTAAAGCGGACA
TTAAATCCGCAGTCGGGAAAGGCACCTTACAAGTTGTCAAGAACCATCCA
TCCTGGCGTATTCCTTATAATGGGGTGGTGGAGATTGCCTCAGGGGAGGT
GGCCCCGGATGTGGCGTTCTACCTGGCGTCTTCCGAGCAGCGCAATACGG
CGTTAGGTGTCGGGTTGCAGGTGGATCCATTGAGCGGGAACGTCGCTTCC
GCCGGTGGGTTTTATGTGGAAATGATGCCTGGGGTGGAGGAGGAGAGTGT
GCTGAAGGTGGAAGTGAATCTAGCGGTGATCAAGGAGCGGTTTGGGAGCG
TGGATGCGGGGCATTTGTTTGCGCTAAAGGAGCCGATAACGCCTTACAAG
CTGGTGAAGATGCTCTTAGATGgtaaatggggaaaagggggagggagaga
agggagggaagaaggagagagagacgtagggcgtgcgcggaaggtaggtt
gtcaacgttgagggaaccggtggcgctgtgtgtgacggtcaggacggtgt
tggactaaacggggggagaaaggagggagggagggagggagggagggaca
gaagggagggaggaatgggtggtttggacgtgtagatataagtgtaacgt
gtgactggtttgtagtaggttgacaggcggctccacattttgtgtcccaa
cacttacgttgtctctgtagattcacttacccatcgtcctctcccctccg
accctccatccctccctcccccagGCCTCGGCGTCAGCATGGCTTCCGAA
AGCCTGCCAACCTACCGCTGCACCTGCTCGGCAGAAAAGGTCTTTCGTGC
CTTGAGCCTACTGGGGGAGGAGGAGGTTGAGGACATCCTGGCAAAAGAGG
GGGTTATTGACGCGAAATGTGAGTTCTGTGCCGAGAGGTATGAGTTGACT
AGGGAGCAGTTGATTGAGCTTAGAGAGCAGGCGCTGGCGGCGGCGGCGGC
GGGGGAGCCCTGGCCGGCGACCCGGTGAGAGAGAGAGAGGAGAAGCACAG
GAGCAAAATGGCTAAGAATTATAATATTA
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protein sequence of NO06G02250.1

>NO06G02250.1-protein ID=NO06G02250.1-protein|Name=NO06G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=437bp
MKDTRSLTFFFAPFRWYSLSLCCCCLLLFPTMLSALITTTSRLRPNLSGR
RALTTTTSMRAGIGGGYNNQSYQYRRNVQRPTPRGPAFRRFMTSPPTHAN
AGSDDFVPIEPATLNWEKVGPDQDVFISALSQNGHVNVKVISAKNMVQAI
KEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAI
SDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIP
YNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFY
VEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKML
LDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAK
CEFCAERYELTREQLIELREQALAAAAAGEPWPATR*
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Synonyms
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