NO06G02230, NO06G02230 (gene) Nannochloropsis oceanica

Overview
NameNO06G02230
Unique NameNO06G02230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1332
Alignment locationchr6:650822..652153 -

Link to JBrowse

Properties
Property NameValue
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:650822..652153 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO:0008017microtubule binding
GO:0005524ATP binding
GO:0005515protein binding
GO:0003774motor activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO:0009987cellular process
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR027640Kinesin-like_fam
IPR001752Kinesin_motor_dom
Homology
BLAST of NO06G02230 vs. NCBI_GenBank
Match: EWM26228.1 (hypothetical protein Naga_100025g48 [Nannochloropsis gaditana])

HSP 1 Score: 661.4 bits (1705), Expect = 1.900e-186
Identity = 351/420 (83.57%), Postives = 369/420 (87.86%), Query Frame = 0
Query:    1 MSSAAIGGDSAGNEEGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRDGNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVGDEVAGEEGVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLLDPEMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLKGRQKQLEEIEAMGVGGEERREEG 421
            MSSAA    +AGNEEGICVAIRARP+S +EK+QGQRALWRCLPAH+SITLTG DGNPLPDR+PG  FFTYDKVFSEN+STSDVY AIGRPIVSSV+QGFNGTIFAYGQTSSGKTYTMVGDE  GEEGVLHLAARD+FRLISET DRDFLLRVSFVEIYNENIRDLLDPE P+L IREDPRKGVY+EAHESIITDFDSI+TALKTGS+HRRVE+TAMNERSSRSHTIF+MIVE                          DGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDG+ HKGFRDSKLTRILQPSLSGNAKMAVVCCITAAE+YLEETRSTLQFASRAKMVRT AVVNEVLDDRAQLKRLKKELQDLKGRQ+QLEE EA G  G    E G
Sbjct:    1 MSSAA--PSAAGNEEGICVAIRARPLSSREKIQGQRALWRCLPAHDSITLTGPDGNPLPDRSPGLSFFTYDKVFSENSSTSDVYHAIGRPIVSSVLQGFNGTIFAYGQTSSGKTYTMVGDETGGEEGVLHLAARDIFRLISETNDRDFLLRVSFVEIYNENIRDLLDPETPSLSIREDPRKGVYLEAHESIITDFDSIMTALKTGSRHRRVESTAMNERSSRSHTIFRMIVE-------------------------RDGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGSVHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAERYLEETRSTLQFASRAKMVRTRAVVNEVLDDRAQLKRLKKELQDLKGRQRQLEECEAAGGLGARGGEGG 393          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: CBJ28848.1 (kinesin family-like protein [Ectocarpus siliculosus])

HSP 1 Score: 432.2 bits (1110), Expect = 1.900e-117
Identity = 234/417 (56.12%), Postives = 293/417 (70.26%), Query Frame = 0
Query:   14 EEGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRDGNPLPDRNPGFG-FFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVGDEVAGEEGVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLLDPEMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLKGRQKQLEEIEAMGVGGE-------ERREEGER 423
            E    VAIR RP++ +EK  GQ  +WRC+P HNS+T T  +GNPLPD   G G FFTYD++F E++ST  VY    R IV SV +G NGTIFAYGQTSSGKT+TM G       G++ +A RD+FRLI E  DR FL+RVS++EIY E IRDLL+PE   + +REDPRKG+YI+AHE  + DF+++L  L+ G K R V  T MN RSSRSHTIF+++VES++       T+  E              VD + LVATLNLVDLAGSESVRHTGATG R KEGG INQSLLTLSRVI  L Q G++H  +RDSKLTRILQPSLSGNA+MA++CC TAAE +LEETRSTLQFASRAK ++T A+VNE++DD+ Q++R+ +EL  LK  +K  E+      GGE       E+ E+ E+
Sbjct:   22 ETSTTVAIRLRPLNDREKEGGQNKIWRCVPTHNSVTQTSPEGNPLPD---GKGTFFTYDRIFDEDSSTQAVYDGAARDIVHSVSRGMNGTIFAYGQTSSGKTFTMQGGGSEANPGIVQIATRDLFRLIQEKTDRMFLMRVSYLEIYQEEIRDLLNPENTNMQVREDPRKGIYIDAHEETVGDFETVLKILRVGEKQRHVGCTEMNSRSSRSHTIFRLVVESQQMFDEKVHTSQEE--------------VDPSTLVATLNLVDLAGSESVRHTGATGTRQKEGGMINQSLLTLSRVIQTLTQPGHSHVNYRDSKLTRILQPSLSGNARMAIICCATAAEGFLEETRSTLQFASRAKEIKTRAIVNEIVDDKTQIRRMAQELATLK--RKHAEQQGGAAAGGELVEALQQEKAEQAEK 419          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: XP_002183195.1 (kinesin family-like protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC45413.1 kinesin family-like protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 415.6 bits (1067), Expect = 1.800e-112
Identity = 228/386 (59.07%), Postives = 285/386 (73.83%), Query Frame = 0
Query:   19 VAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRDGNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVGDEV-------AGEEGVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLL--DPEMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQD 396
            VAIR RP++  E    ++ +W+ LP ++SI  T  DG PLP+R  G  FFT+DK FSE+++T  VY  + + IV+SVV G NGTIFAYGQTSSGKT+TM G          +G  GV+H+AA+D+F  I  + DR FL+R SF+EIYNE +RDLL  DP   TL +REDPR+GV+++++E I+TDF+S+L+ L  G K R   +TAMNERSSRSHTIF++ +ES+ + +G S        A       ADG  DGAVL++TLNLVDLAGSESVRHTGATG+R KEGG INQSLLTLSRVI ALG    TH  FRDSKLTRILQPSLSGNA+MAV+CC T +E YLEETRSTLQFASRAK+V+T A VNEVLDDR+ ++RL+KEL +
Sbjct:    1 VAIRMRPLNSNE--SARQRVWKVLPKYSSIAQTTPDGKPLPERVTGRTFFTFDKAFSESSTTQQVYDDVAKNIVNSVVTGLNGTIFAYGQTSSGKTFTMQGSGTIQEGSNGSGGGGVVHMAAQDIFNRIENSPDRIFLVRASFLEIYNEEVRDLLADDPHTRTLAVREDPRRGVFVQSNEEIVTDFESLLSILFRGEKSRAFASTAMNERSSRSHTIFRITIESRLKASGDS--------AGDKENDDADGG-DGAVLISTLNLVDLAGSESVRHTGATGDRQKEGGMINQSLLTLSRVIVALGTPNQTHINFRDSKLTRILQPSLSGNARMAVICCATPSELYLEETRSTLQFASRAKLVKTNAQVNEVLDDRSVIRRLQKELAE 375          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: OEU19982.1 (kinesin-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 406.0 bits (1042), Expect = 1.500e-109
Identity = 221/384 (57.55%), Postives = 271/384 (70.57%), Query Frame = 0
Query:   19 VAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRDGNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVG-----DEVAGEEGVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLLDPEMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLK 398
            VAIR RP++  E        W+ LP + SI  T RDG PL +R  G  FFT+DK F E+ +   VY ++ + IV+S V G NGTIFAYGQTSSGKTYTM G       + GE GV+H+AA D+F  I + Q+R FL+RVSF+EIYNE +RDLL     TL IREDPR+GVY+E++E ++TDFD +L  L  G K R   +TAMNERSSRSHTI ++ +ES+E+            A     +   +   DGAV ++TLNLVDLAGSESVRHTGATG R KEGG INQSLLTLSRVI ALG    TH  FRDSKLTRILQPSLSGNA+MAV+CC T +E YLEETRSTLQFASRAK+V+T A VNEVLD+R+ ++RL+K+L + K
Sbjct:    2 VAIRMRPLNNAE--GNNERTWKVLPKYASIAQTTRDGKPLSERITGRTFFTFDKTFGEDTNNKQVYNSVAKGIVNSAVDGLNGTIFAYGQTSSGKTYTMQGAGNLEQGMGGEGGVVHMAANDIFSQIVQKQERIFLVRVSFLEIYNEEVRDLLGDPNQTLKIREDPRRGVYVESNEEVVTDFDGLLKILVRGDKSRTFASTAMNERSSRSHTILRITIESREK-----------DADEGMDIENREPSSDGAVRISTLNLVDLAGSESVRHTGATGERQKEGGLINQSLLTLSRVIVALGAPNQTHINFRDSKLTRILQPSLSGNARMAVICCATPSELYLEETRSTLQFASRAKLVKTNAQVNEVLDERSMIRRLQKQLAEAK 372          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: GAX09675.1 (centromeric protein E [Fistulifera solaris])

HSP 1 Score: 394.4 bits (1012), Expect = 4.400e-106
Identity = 215/390 (55.13%), Postives = 273/390 (70.00%), Query Frame = 0
Query:   14 EEGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRDGNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVGDEVAGE------EGVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLLDPEMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLK 398
            EEGI VAIR RPM+ KE     + +W+ LP   S+T    DG PL +R  G  FFTYDK F E A+T DVY A+ + IV S + G NGT+FAYGQTSSGKT+TM G     E       G++H+AA D+F+ I+   +R FL+R SF+EIYNE++RDLL  +  TL IREDPR+GV+++  E I+++F+ +L  L  G K R   +TAMNERSSRSHTI ++ +ES+E+    ++                D D  GAVLV+TLNLVDLAGSESVRHTGATG R KEGG INQSLLTLSRVI ALG    TH  FRDSKLTRILQPSLSGN++++ +CC T  E  LEETRSTLQFA+RAK+V+T A VNEVLDDR+ +K+L++EL++ +
Sbjct:   50 EEGIQVAIRMRPMNKKE--AQSKKIWKVLPRFASVTQMTPDGQPLSERVTGRTFFTYDKAFPETATTRDVYDAMAKEIVQSAITGVNGTVFAYGQTSSGKTFTMQGCGTIEEGLNGNGGGIVHMAAADIFQNIANQPNRVFLVRASFLEIYNEDVRDLLSSDNKTLPIREDPRRGVFVQCEEEIVSNFEDLLGVLFRGDKSRSFASTAMNERSSRSHTILRITIESREKTVDDAT--------------GDDSDGGGAVLVSTLNLVDLAGSESVRHTGATGERQKEGGMINQSLLTLSRVIVALGSSNQTHINFRDSKLTRILQPSLSGNSRISFICCATPTEMCLEETRSTLQFAARAKLVKTNARVNEVLDDRSIIKKLQRELEEAR 423          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: GAX19565.1 (centromeric protein E [Fistulifera solaris])

HSP 1 Score: 393.7 bits (1010), Expect = 7.500e-106
Identity = 219/407 (53.81%), Postives = 279/407 (68.55%), Query Frame = 0
Query:   14 EEGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRDGNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVGDEVAGE------EGVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLLDPEMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLKGRQKQLEEIEAMGVGGE 415
            EEGI VAIR RP++ KE     + +W+ LP   S+T    DG PL +R  G  FFTYDK F E A+T DVY A+ + IV S + G NGT+FAYGQTSSGKT+TM G     E       G++H+AA D+F+ I+   +R FL+R SF+EIYNE++RDLL  +  T+ IREDPR+GV+++  E I+++F+ +L  L  G K R   +TAMNERSSRSHTI ++ +ES+E+    +S                D D  GAVLV+TLNLVDLAGSESVRHTGATG R KEGG INQSLLTLSRVI ALG    TH  FRDSKLTRILQPSLSGN++++ +CC T  E  LEETRSTLQFA+RAK+V+T A VNEVLDDR+ +K+L++EL++ +         +A GVG E
Sbjct:   50 EEGIQVAIRMRPLNKKE--AQSKPIWKVLPRFASVTQMTPDGQPLSERVTGRTFFTYDKAFPETATTRDVYNAMAKEIVESAITGVNGTVFAYGQTSSGKTFTMQGCGTIEEGLNGNGGGIVHMAAADIFQNIANQPNRVFLVRASFLEIYNEDVRDLLSSDNKTIPIREDPRRGVFVQCEEEIVSNFEDLLGVLFRGDKSRSFASTAMNERSSRSHTILRITIESREKTVDDAS--------------GEDSDGGGAVLVSTLNLVDLAGSESVRHTGATGERQKEGGMINQSLLTLSRVIVALGSSNQTHINFRDSKLTRILQPSLSGNSRISFICCATPTEMCLEETRSTLQFAARAKLVKTNARVNEVLDDRSIIKKLQRELEEARR--------QANGVGVE 432          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: EJK46449.1 (hypothetical protein THAOC_34878 [Thalassiosira oceanica])

HSP 1 Score: 372.9 bits (956), Expect = 1.400e-99
Identity = 215/412 (52.18%), Postives = 274/412 (66.50%), Query Frame = 0
Query:   13 NEEGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRDGNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVG-----DEVAGEE-----GVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLL--DPEMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESK---ERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLKGRQKQLEEIEAM 410
            NEEGI VAIR RP++ +E  Q  R +W+ L  H+ +     +G P+P R  G  FF YD+VF E ++T  VY      IV  V  G NGTIFAYGQTSSGKT+TM G     D  A        G++H+AARD+F  I +   R FL+RV+F+EIYNE +RDLL       TL IRED R+GV+++++E+I+T  +++L  L  G K+R V +TAMNERSSRSHTIF++ VES+   E P G                         AV ++TLNLVDLAGSESVRHTGATG+R KEGGKINQSLLTLSRVI  LG+ G  H  FRDSKLTRILQPSLSGNA+MAV+CC T +E YLEETRSTL+FA   K+V+TCA VNE++DDR+ +K+L++EL++ +      E +E M
Sbjct:   85 NEEGILVAIRMRPLNDRES-QNTR-VWKVLQKHSGVAQCTAEGKPVPGRQAGQNFFRYDRVFGERSTTGQVYSETSGEIVGGVCGGLNGTIFAYGQTSSGKTFTMQGSGSIEDGAAPASSLEGGGIVHMAARDIFGHIEKDPMRVFLVRVAFIEIYNEEVRDLLVTGGGKSTLTIREDKRRGVFVDSNETIVTSSENLLGVLFAGEKNRSVGSTAMNERSSRSHTIFRITVESRIREEEPAGGDXXXXXXXXXXXXXXXXXXXXXXXAVRISTLNLVDLAGSESVRHTGATGDRQKEGGKINQSLLTLSRVIEGLGK-GAAHVNFRDSKLTRILQPSLSGNARMAVICCTTPSELYLEETRSTLKFAEGCKLVKTCAQVNEIMDDRSLIKKLQRELREARRGGPDKEAMEQM 493          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: POM81946.1 (Kinesin-like protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 363.6 bits (932), Expect = 8.300e-97
Identity = 200/410 (48.78%), Postives = 276/410 (67.32%), Query Frame = 0
Query:    1 MSSAAIGGDSAGNEEGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRD-GNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVGD--------EVAGEEGVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLLDP--EMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQDGNTHKG--FRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLK 398
            ++SA +   +    E I V IR RPM+ +E          C+P  N ++LT  + G PL  +      F YD++F  ++ +  +Y+++GR IV S + G NGTIFAYGQTSSGKTYTM GD          +   GVL LA  D+F  I   +DRDFLLRVSF+EIYNE ++DLL P  +   L +REDPRKGVY+E  E IIT+++ I+T L+TG+++R    TAMNE+SSRSH++F++++ESKE+               +     ++ DV+GAVLVA+LNLVDLAGSES+RHTGA G R +E G IN+SLLTL+RVI++L   G   +   FRDSKLTR+LQ SL GN +  ++CC+T +++Y+EET+STLQFA+RAK ++T A VNEVLDD+ QL+RLK+E+ +LK
Sbjct:  233 VNSALMEVSAPAEAENIAVCIRVRPMNERETRSHDAPALACVPKLNVVSLTDPETGAPLSGKG---NVFQYDQIFDASSDSHAIYESVGRRIVHSTLSGINGTIFAYGQTSSGKTYTMQGDGGMPFEPEAESSRPGVLQLAVEDIFNYIENCKDRDFLLRVSFLEIYNEVVKDLLSPSEKGANLKLREDPRKGVYVECREEIITNYEDIVTLLQTGNQNRTTGQTAMNEKSSRSHSVFRIVIESKEK---------------SDSRRQSEEDVNGAVLVASLNLVDLAGSESLRHTGAEGIRQREAGNINKSLLTLARVINSLASSGGRGQNAPFRDSKLTRLLQNSLGGNTRTLIICCVTPSDRYIEETKSTLQFAARAKDIKTSATVNEVLDDQTQLRRLKREVHELK 624          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: GAY00781.1 (Hypothetical protein PINS_008597, partial [Pythium insidiosum])

HSP 1 Score: 362.8 bits (930), Expect = 1.400e-96
Identity = 211/439 (48.06%), Postives = 273/439 (62.19%), Query Frame = 0
Query:   12 GNEEGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRDGNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVGDEVA----------------GEEGVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLLDPEMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHAL----GQDGNTHKG-----FRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLKGRQKQLEEIEAMGVGGEERREEGEREGA 426
            G  E I V IR RP++ +E       + R + A N I++T RDG P P +      F YD +F   +ST  +Y  + + IV S + G NGTIFAYGQTSSGKTYTM G   A                G+ G+L LA  D+F  I ++ DRDF LRVSFVEIYNE ++DLL P+   L +REDPRKGVY+E  E IIT +D IL  L+ G+  R V  TAMN+RSSRSH+IF++++ESKE+ T                   ++ DV+GAVLVA L+LVDLAGSESVRHT A G R +E G IN+SLLTLSRVI+ L    GQ  N   G     FRDSKLTR+LQ SL GN +  ++CC+T +++YL+ET+STLQFA+RAK ++T A VNE+LDD AQL+RLK+E+ +LK      +   A+    E  + E  R  A
Sbjct:  618 GEAENIAVCIRVRPLNXREIRNKDVPVLRTVNALNLISITDRDGQPQPGKQ---NVFQYDHIFDATSSTRAMYDRVAKRIVRSALDGINGTIFAYGQTSSGKTYTMTGASGADADASGTXGXNPGSGGGDLGILQLAVEDIFSFIEQSTDRDFXLRVSFVEIYNEVVKDLLTPDSDNLKLREDPRKGVYVECREEIITTYDDILQLLQIGTTRRTVGTTAMNDRSSRSHSIFRVVIESKEKSTS---------------RRQSEDDVNGAVLVACLSLVDLAGSESVRHTAADGLRQREAGNINKSLLTLSRVINTLASSQGQGHNAAAGASAAPFRDSKLTRLLQNSLDGNTRTLIICCVTPSDRYLDETKSTLQFAARAKTIQTSAHVNEILDDHAQLRRLKREVHELKRLLNGRDAYHALKAENEALQHEQNRNKA 1038          
BLAST of NO06G02230 vs. NCBI_GenBank
Match: ETI51795.1 (hypothetical protein F443_04910 [Phytophthora parasitica P1569])

HSP 1 Score: 357.5 bits (916), Expect = 5.900e-95
Identity = 197/396 (49.75%), Postives = 271/396 (68.43%), Query Frame = 0
Query:   15 EGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITLTGRD-GNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFNGTIFAYGQTSSGKTYTMVGD-----EVAGEE---GVLHLAARDVFRLISETQDRDFLLRVSFVEIYNENIRDLLDP--EMPTLHIREDPRKGVYIEAHESIITDFDSILTALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAAAAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQSLLTLSRVIHALGQD--GNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAAEKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLK 398
            E I V IR RPM+ +E     ++   C+PA N ++LT  + G P+  +      F YD++F   + +  +Y+ + R IV S + G NGTIFAYGQTSSGKTYTM GD     E   E    G+L LA  D+F  I    DRDFLLRVSF+EIYNE ++DLL+P  +   L +REDPRKGVY+E  E IIT+++ I+T L+TG+++R    TAMN++SSRSH++F++++ESK++               A     ++ DV+GAVLVA+LNLVDLAGSES+R+TGA G R +E G IN+SLLTLSRVI++L     G  +  FRDSKLTR+LQ SL GN +  ++CC+T +++++EET+STLQFA+RAK ++T A VNEVLDD+ QL+RLK+E+ DLK
Sbjct:   11 ENIAVCIRVRPMNERETRANDQSALACVPALNVVSLTDPETGAPMTGKG---NVFQYDQIFDATSDSHAIYERVARRIVHSTLGGINGTIFAYGQTSSGKTYTMQGDGGMPFEPEAESCRPGILQLAVEDIFSYIESCVDRDFLLRVSFLEIYNEVVKDLLNPKDKGANLKLREDPRKGVYVECKEEIITNYEDIVTLLQTGNQNRTTGQTAMNDKSSRSHSVFRIVIESKQK---------------AESRRHSEEDVNGAVLVASLNLVDLAGSESLRYTGAEGIRQREAGNINKSLLTLSRVINSLASSGGGGQNAPFRDSKLTRLLQNSLGGNTRTLIICCVTPSDRFIEETKSTLQFAARAKDIQTSATVNEVLDDQTQLRRLKREVHDLK 388          
The following BLAST results are available for this feature:
BLAST of NO06G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26228.11.900e-18683.57hypothetical protein Naga_100025g48 [Nannochlorops... [more]
CBJ28848.11.900e-11756.12kinesin family-like protein [Ectocarpus siliculosu... [more]
XP_002183195.11.800e-11259.07kinesin family-like protein, partial [Phaeodactylu... [more]
OEU19982.11.500e-10957.55kinesin-domain-containing protein, partial [Fragil... [more]
GAX09675.14.400e-10655.13centromeric protein E [Fistulifera solaris][more]
GAX19565.17.500e-10653.81centromeric protein E [Fistulifera solaris][more]
EJK46449.11.400e-9952.18hypothetical protein THAOC_34878 [Thalassiosira oc... [more]
POM81946.18.300e-9748.78Kinesin-like protein [Phytophthora palmivora var. ... [more]
GAY00781.11.400e-9648.06Hypothetical protein PINS_008597, partial [Pythium... [more]
ETI51795.15.900e-9549.75hypothetical protein F443_04910 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02230.1NO06G02230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625947gene_6539Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02230.1NO06G02230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02230 ID=NO06G02230|Name=NO06G02230|organism=Nannochloropsis oceanica|type=gene|length=1332bp
ACAGCAACCGCAAGGCTCAAGGAACACTTTCGGTGAAGCGAACGCCCACC
AGCCATGTCGTCCGCCGCCATAGGGGGGGACTCGGCCGGCAACGAAGAAG
GCATCTGCGTCGCCATCCGCGCCCGGCCCATGAGCGGCAAGGAGAAGCTT
CAAGGTCAACGCGCTTTGTGGCGGTGCTTGCCTGCCCACAATTCCATTAC
CTTGACGGGTCGTGATGGCAACCCCCTCCCGGACCGCAACCCGGGCTTCG
GCTTCTTCACATACGATAAGGTATTTTCCGAGAACGCCAGCACCAGCGAC
GTGTATCAGGCTATTGGCCGCCCAATCGTGTCGTCGGTCGTGCAGGGATT
TAATGGCACCATATTTGCGTACGGGCAGACGTCCTCCGGCAAGACCTACA
CGATGGTAGGGGACGAGGTCGCGGGGGAGGAGGGGGTGTTGCATCTGGCG
GCCCGAGATGTGTTTCGACTGATTTCGGAGACGCAAGATCGTGACTTTTT
GCTGCGCGTCTCATTTGTGGAGATTTATAATGAGAATATTCGTGACTTGC
TCGATCCGGAGATGCCTACTCTGCACATTCGGGAGGACCCACGAAAGGGG
GTTTATATAGAGGCACATGAGAGTATCATCACTGATTTTGATTCGATCCT
AACGGCGCTCAAGACGGGCTCGAAGCATCGCCGGGTGGAGGCGACAGCGA
TGAATGAGCGTTCCTCTCGCTCGCATACGATCTTCAAAATGATTGTCGAG
AGCAAGGAACGTCCTACGGGCGTGTCTAGCACTGCTGTACCGGAAACAGC
AGCAGCAGCAGCGCCGATGCCGGCGGCAGATGGTGACGTGGACGGGGCTG
TGCTGGTTGCGACTCTGAATTTAGTGGATCTAGCGGGCTCGGAGAGCGTG
CGACACACAGGTGCGACGGGGAATCGGGCGAAGGAGGGAGGGAAGATCAA
TCAAAGTTTGCTTACGCTTAGTAGGGTGATTCATGCCCTGGGCCAAGATG
GAAATACGCATAAGGGTTTTCGGGACTCAAAATTGACGCGAATTTTGCAG
CCAAGCTTGTCTGGTAATGCTAAGATGGCGGTGGTGTGTTGCATCACGGC
GGCGGAAAAATACCTCGAGGAAACGAGGAGTACCCTTCAGTTTGCGTCGC
GGGCGAAGATGGTCAGGACGTGTGCGGTGGTAAATGAGGTATTGGATGAT
AGGGCACAGCTAAAGAGGTTAAAGAAGGAGCTGCAAGATCTAAAGGGGCG
ACAGAAACAATTGGAAGAGATAGAGGCAATGGGTGTTGGGGGGGAGGAGA
GGAGGGAGGAGGGGGAGAGGGAGGGGGCTTGA
back to top

protein sequence of NO06G02230.1

>NO06G02230.1-protein ID=NO06G02230.1-protein|Name=NO06G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=426bp
MSSAAIGGDSAGNEEGICVAIRARPMSGKEKLQGQRALWRCLPAHNSITL
TGRDGNPLPDRNPGFGFFTYDKVFSENASTSDVYQAIGRPIVSSVVQGFN
GTIFAYGQTSSGKTYTMVGDEVAGEEGVLHLAARDVFRLISETQDRDFLL
RVSFVEIYNENIRDLLDPEMPTLHIREDPRKGVYIEAHESIITDFDSILT
ALKTGSKHRRVEATAMNERSSRSHTIFKMIVESKERPTGVSSTAVPETAA
AAAPMPAADGDVDGAVLVATLNLVDLAGSESVRHTGATGNRAKEGGKINQ
SLLTLSRVIHALGQDGNTHKGFRDSKLTRILQPSLSGNAKMAVVCCITAA
EKYLEETRSTLQFASRAKMVRTCAVVNEVLDDRAQLKRLKKELQDLKGRQ
KQLEEIEAMGVGGEERREEGEREGA*
back to top
Synonyms
Publications