NO06G02060, NO06G02060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_001986497.1 (GH21393 [Drosophila grimshawi] >EDW01364.1 GH21393 [Drosophila grimshawi]) HSP 1 Score: 102.1 bits (253), Expect = 4.000e-18 Identity = 78/279 (27.96%), Postives = 126/279 (45.16%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPT-PKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVL--AASSPSAPLPSSFTARQEETI 333 F+PEG + Q+ +A +A+ GS +I + D VVL E+R SPL+V T KI ++ +H+ +GL+ D R L+ R R Q HWF Y EE+ + + +S + A + G +G + G + S R FGV LFAG +E G+ ++ M PSG ++R+SA+AIG G E A+ L+ +Y P+M+L L + V+ + + L + T+++E T+ Sbjct: 15 FSPEGRLFQVEYAIEAIKLGSTAIGICTNDSVVLAVEKRITSPLMVPKTVEKIVKVDEHIGCATSGLMADARTLIERARVECQNHWFVYNEEMTVESCAQAVSTL-------AIQFGDSGDSDGAAAMS----------------------------RPFGVAILFAG--------------IENGKP-------------QLWHMDPSGTYIRYSAKAIGSGSEGAQQNLQDKYTPEMTLSDATDLCLNTLKQVMEEKLNETNVELMTMTTSKREFTM 231
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRX26879.1 (Proteasome subunit alpha type-5 [Trichinella nelsoni]) HSP 1 Score: 102.1 bits (253), Expect = 4.000e-18 Identity = 82/305 (26.89%), Postives = 133/305 (43.61%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQ 361 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Q Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQLFQ 258
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRX42299.1 (Proteasome subunit alpha type-5, partial [Trichinella murrelli]) HSP 1 Score: 102.1 bits (253), Expect = 4.000e-18 Identity = 82/305 (26.89%), Postives = 133/305 (43.61%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQ 361 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Q Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQLFQ 258
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRX84976.1 (Proteasome subunit alpha type-5 [Trichinella sp. T6]) HSP 1 Score: 102.1 bits (253), Expect = 4.000e-18 Identity = 82/305 (26.89%), Postives = 133/305 (43.61%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQ 361 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Q Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQLFQ 258
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRZ53423.1 (Proteasome subunit alpha type-5 [Trichinella nativa]) HSP 1 Score: 102.1 bits (253), Expect = 4.000e-18 Identity = 82/305 (26.89%), Postives = 133/305 (43.61%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQ 361 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Q Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQLFQ 258
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRZ94497.1 (Proteasome subunit alpha type-5 [Trichinella sp. T8]) HSP 1 Score: 102.1 bits (253), Expect = 4.000e-18 Identity = 82/305 (26.89%), Postives = 133/305 (43.61%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQ 361 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Q Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQLFQ 258
BLAST of NO06G02060 vs. NCBI_GenBank
Match: OUC39895.1 (putative proteasome subunit alpha [Trichinella nativa]) HSP 1 Score: 102.1 bits (253), Expect = 4.000e-18 Identity = 82/305 (26.89%), Postives = 133/305 (43.61%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQ 361 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Q Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQLFQ 258
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_003380246.1 (proteasome subunit alpha type-2-A [Trichinella spiralis] >EFV60138.1 proteasome subunit alpha type-2-A [Trichinella spiralis]) HSP 1 Score: 101.7 bits (252), Expect = 5.300e-18 Identity = 81/303 (26.73%), Postives = 132/303 (43.56%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEEL 359 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQL 256
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRX94808.1 (Proteasome subunit alpha type-5 [Trichinella pseudospiralis]) HSP 1 Score: 101.7 bits (252), Expect = 5.300e-18 Identity = 79/306 (25.82%), Postives = 133/306 (43.46%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQL 362 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L++ KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG + R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D + L+ EE+ L Sbjct: 28 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMIPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAGYD----------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYEANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTKDSG----FEILAKEEVENL 249
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRY37059.1 (Proteasome subunit alpha type-5, partial [Trichinella spiralis]) HSP 1 Score: 101.7 bits (252), Expect = 5.300e-18 Identity = 81/303 (26.73%), Postives = 132/303 (43.56%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEEL 359 F+PEG + Q+ +A +A+ GS +I + ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQL 256 The following BLAST results are available for this feature:
BLAST of NO06G02060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02060 ID=NO06G02060|Name=NO06G02060|organism=Nannochloropsis oceanica|type=gene|length=1536bpback to top protein sequence of NO06G02060.1 >NO06G02060.1-protein ID=NO06G02060.1-protein|Name=NO06G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=384bpback to top Synonyms
Publications
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