NO06G01610, NO06G01610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01610 vs. NCBI_GenBank
Match: POM65973.1 (Thioredoxin-like protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 169.5 bits (428), Expect = 1.700e-38 Identity = 95/182 (52.20%), Postives = 122/182 (67.03%), Query Frame = 0 Query: 116 DEEDDVEDENGL-----DAELKMIREKRMAQLKAQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIA-EERVQGFEGLTEGMAKG--------------AEDEFPTSVLATKLANLGAI 278 +EE D +DE L D EL+ IR R+ QLK + +EK ++KGHG+YREI+QDEFL EVTGS V VHFYH+DF RCKIMD HL LA +H+E KFLK+NAEKAPFFV KL +++LPT++ FK+ IA ERV GF+GLT+ + + D FPT+ LA KL +GA+ Sbjct: 84 EEEVDSDDEAMLDELDEDPELERIRAARLKQLKQEFEEKQTLMAKGHGEYREITQDEFLKEVTGSPFVAVHFYHRDFERCKIMDMHLEKLARSHIECKFLKLNAEKAPFFVEKLVIRVLPTVVCFKDGIAFPERVIGFDGLTDDEEEAELANFGSRANHHATSSDNFPTAALAHKLVKIGAL 265
BLAST of NO06G01610 vs. NCBI_GenBank
Match: XP_009834793.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV75662.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 167.5 bits (423), Expect = 6.600e-38 Identity = 86/138 (62.32%), Postives = 103/138 (74.64%), Query Frame = 0 Query: 128 DAELKMIREKRMAQLKAQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIAEE-RVQGFEGLTEGMAKGAEDEFPT 265 D + +RE R+ QL+ Q++ KAENL+KGHG YREI QDEFL EVT S VLVHFYH+DF RCK+MD HL +A HVE K LKI+AEKAPFFV KL V++LPTII F+ IA + RV GFEGL + + G EDEFPT Sbjct: 107 DPDFMRLREVRLKQLQEQYKLKAENLAKGHGDYREILQDEFLKEVTSSARVLVHFYHRDFERCKVMDMHLGRIAKRHVEVKVLKIDAEKAPFFVAKLVVRVLPTIILFENGIANDTRVVGFEGLADDLPLGREDEFPT 244
BLAST of NO06G01610 vs. NCBI_GenBank
Match: XP_024585090.1 (thioredoxin-like protein [Plasmopara halstedii] >CEG48721.1 thioredoxin-like protein [Plasmopara halstedii]) HSP 1 Score: 163.3 bits (412), Expect = 1.200e-36 Identity = 91/176 (51.70%), Postives = 118/176 (67.05%), Query Frame = 0 Query: 117 EEDDVEDENGL--DAELKMIREKRMAQLKAQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIA-EERVQGFEGLTEGMAKG------------AEDEFPTSVLATKLANLGAI 278 + DD E N L D EL+ IR R+ QLK +++E+ L+KGHG++REISQDEFL EVT S V VHFYH+DF RCKIMD HLA LA +H+E KFLK++AEKAPFF KL +++LP+I+ F++ +A ER+ GFEGLT K A D FPT+ LA K+ +G I Sbjct: 90 DSDDEEMLNQLDDDPELERIRTARLKQLKNEYEEQQILLAKGHGEFREISQDEFLKEVTSSPLVAVHFYHRDFERCKIMDMHLAKLARSHIECKFLKLDAEKAPFFAKKLMIRVLPSIVCFRDGVAFSERIIGFEGLTSDDEKAEASNFGSRKTAHANDNFPTAALARKMVEIGVI 265
BLAST of NO06G01610 vs. NCBI_GenBank
Match: CDW72684.1 (phosducin-like protein 3 isoform 1 [Stylonychia lemnae]) HSP 1 Score: 161.0 bits (406), Expect = 6.200e-36 Identity = 97/212 (45.75%), Postives = 130/212 (61.32%), Query Frame = 0 Query: 109 HKANLLSDEEDDVEDENGLDAELKMIREKRMAQLKAQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIAEERVQGFEGLTEGMAKGAEDEFPTSVLATKLANLGAIEYTAPPTLEELRKFQLKKTMGAIRAGGGGTCLYDDDEDFNGDI 321 H+ N + DD + + ++ IRE+R++Q+K Q+QEK ENL KGHGQY EI +DEFL VT S+ V+ HFYHKDF RCKI+D HL +A HVEA+FL +NAE+APFF+ KLQV++LPT+I F + IA +R+ GFE L GA D+FP L +L G ++ L + K Q+ IR GG D +ED DI Sbjct: 60 HQPN--KQDSDDEFFDXXXEKIMRDIREQRLSQMKNQYQEKQENLIKGHGQYTEIKEDEFLANVTKSKFVVCHFYHKDFERCKIVDMHLRNIARNHVEARFLYLNAEQAPFFIKKLQVQVLPTMICFIDGIAVDRIVGFEDL------GARDDFPQISLTRRLIRSGVLK-----PLTKAEKGQIN-----IRRGGN-----DSEEDSGDDI 248
BLAST of NO06G01610 vs. NCBI_GenBank
Match: GAX94863.1 (thioredoxinlike protein putative [Pythium insidiosum]) HSP 1 Score: 159.5 bits (402), Expect = 1.800e-35 Identity = 83/156 (53.21%), Postives = 109/156 (69.87%), Query Frame = 0 Query: 138 RMAQLKAQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIA-EERVQGFEGL-------------TEGMAKGAEDEFPTSVLATKLANLGAIEY 280 R+AQL+AQH+++ E L+KGHG+YREI+QDEFL EVT S VLVHFYH DF RCKIMD HL LA H+E KFLK+NAEKAPFFV KL+V++LPT++ F++ +A +R+ GF+GL T K D FPT LA +L +G +++ Sbjct: 111 RLAQLQAQHKKQQELLAKGHGEYREITQDEFLKEVTSSPLVLVHFYHNDFERCKIMDMHLNRLAKHHIECKFLKLNAEKAPFFVEKLRVRVLPTVVGFRDGVAFPQRIIGFDGLSADDEDEELSAFGTRASHKKPSDTFPTIALARRLEAIGVLQH 266
BLAST of NO06G01610 vs. NCBI_GenBank
Match: KUF72698.1 (Phosducin protein 3 [Phytophthora nicotianae] >KUF84053.1 Phosducin protein 3 [Phytophthora nicotianae]) HSP 1 Score: 156.0 bits (393), Expect = 2.000e-34 Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 0 Query: 115 SDEEDDVEDENGL-----DAELK---MIREKRMAQLKAQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIA-EERVQGFEGLTEGMAKG--------------AEDEFPTSVLATKLANLGAIE 279 ++EE D +DE L D EL+ +IR R+ QLK + +EK ++KGHG+YREI+QDEFL EVTGS V VHFYH+DF RCKIMD H++ LA +H+E KFLK+NAEKAPFFV KL +++LPT++ FK+ +A ERV GF+GLTE + + D FPT+ LA+ +I+ Sbjct: 85 TEEELDSDDEAMLAELDEDPELERSLLIRAARLKQLKHEFEEKQSLMAKGHGEYREITQDEFLKEVTGSPLVAVHFYHRDFERCKIMDMHMSKLARSHIECKFLKLNAEKAPFFVEKLVIRVLPTVVCFKDGVAFPERVIGFDGLTEDDEEAELANFGSRANHHATSSDNFPTAADENILADWASID 271
BLAST of NO06G01610 vs. NCBI_GenBank
Match: EJY73770.1 (hypothetical protein OXYTRI_04981 (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 155.6 bits (392), Expect = 2.600e-34 Identity = 93/206 (45.15%), Postives = 125/206 (60.68%), Query Frame = 0 Query: 115 SDEEDDVEDENGLDAELKMIREKRMAQLKAQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIAEERVQGFEGLTEGMAKGAEDEFPTSVLATKLANLGAIEYTAPPTLEELRKFQLKKTMGAIRAGGGGTCLYDDDEDFNGDI 321 SD+ED+ +DE + ++ IR+KR+ Q++ + Q K EN KGHG Y EI ++EFLP VT S+ L HFYHKDF RCKI+D HL +A H EAKF+ INAE APFF+ KLQV++LPTII F + +A +RV GFE L GA+D+FP L +L G ++ L + K Q+ ++ G G D D D DI Sbjct: 69 SDDEDNWDDEE--EKIMREIRDKRLVQMQKEFQTKQENRIKGHGTYTEIKEEEFLPTVTKSKFTLCHFYHKDFERCKIVDMHLRNIASVHTEAKFVYINAEMAPFFIQKLQVQVLPTIICFIDGVAVDRVVGFEDL------GAKDDFPMIALTRRLIRSGVLK-----ALSKAEKGQI-----FVKRGKKG----DSDSDSGDDI 252
BLAST of NO06G01610 vs. NCBI_GenBank
Match: CCA23852.1 (thioredoxinlike protein putative [Albugo laibachii Nc14] >CCA24036.1 thioredoxinlike protein putative [Albugo laibachii Nc14]) HSP 1 Score: 153.7 bits (387), Expect = 9.900e-34 Identity = 79/142 (55.63%), Postives = 104/142 (73.24%), Query Frame = 0 Query: 144 AQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIA-EERVQGFEGLTEGMA------KGAE-DEFPTSVLATKLANLGAI 278 A+H K + LSKGHG+Y+EISQDEFLP VT S V+VHFYHK+F RC+IMDKHL L+P +VE KFLKI+AEKAPFFV +L V++LPT++ F+ +A ER+ GFEGL + + + E D+FPT LA +LA +G + Sbjct: 122 AEHTRKQQLLSKGHGEYQEISQDEFLPNVTSSELVVVHFYHKEFERCEIMDKHLLQLSPQYVECKFLKIDAEKAPFFVERLNVRVLPTLVGFRNGVALPERIVGFEGLVDDSSLPNDSYRAVEADKFPTFALAKRLAGIGVL 263
BLAST of NO06G01610 vs. NCBI_GenBank
Match: XP_005854521.1 (thioredoxin-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU21838.1 thioredoxin-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 153.3 bits (386), Expect = 1.300e-33 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 0 Query: 181 HFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIAEERVQGFEGLTEGMAKGAEDEFPTSVLATK 271 HFYHKDFMRCKIMDKHLA LAP HVE KFLKINAEKAPFFVGKL VKILPT+I+FK+SIAEER+QGFEGL +G KG EDEFPT+ +A + Sbjct: 1 HFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQPKGEEDEFPTARVAAR 90
BLAST of NO06G01610 vs. NCBI_GenBank
Match: CCI48144.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 152.5 bits (384), Expect = 2.200e-33 Identity = 77/144 (53.47%), Postives = 103/144 (71.53%), Query Frame = 0 Query: 142 LKAQHQEKAENLSKGHGQYREISQDEFLPEVTGSRHVLVHFYHKDFMRCKIMDKHLAILAPAHVEAKFLKINAEKAPFFVGKLQVKILPTIIYFKESIA-EERVQGFEGLTEGMAKGAE-------DEFPTSVLATKLANLGAI 278 LKA+H K + LSKGHG+Y+EI+QDEFLP VT S V+VHFYH +F RCKIMD+HL L+ H+E KFLKINAEKAPFFV +L +++LPTI+ F+ +A ER+ GFEGL + + + D+F T LA +LA++G + Sbjct: 90 LKAEHIRKQQLLSKGHGEYQEITQDEFLPNVTSSELVVVHFYHNEFERCKIMDQHLGQLSSKHIECKFLKINAEKAPFFVERLNIRVLPTILGFRNGVAFPERIVGFEGLVDDPSASKDSLRALEADKFSTFALAKRLASIGVL 233 The following BLAST results are available for this feature:
BLAST of NO06G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01610 ID=NO06G01610|Name=NO06G01610|organism=Nannochloropsis oceanica|type=gene|length=1120bpback to top protein sequence of NO06G01610.1 >NO06G01610.1-protein ID=NO06G01610.1-protein|Name=NO06G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bpback to top Synonyms
Publications
|