NO06G01470, NO06G01470 (gene) Nannochloropsis oceanica

Overview
NameNO06G01470
Unique NameNO06G01470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2157
Alignment locationchr6:466767..468923 -

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Properties
Property NameValue
DescriptionAlpha beta fold family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:466767..468923 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR000073AB_hydrolase_1
Homology
BLAST of NO06G01470 vs. NCBI_GenBank
Match: EWM26182.1 (alpha beta fold family protein [Nannochloropsis gaditana])

HSP 1 Score: 498.8 bits (1283), Expect = 1.300e-137
Identity = 236/281 (83.99%), Postives = 257/281 (91.46%), Query Frame = 0
Query:   59 PLVASVMDQ-AMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            PL+ S +DQ  +P  P K+TRP LPTTFW WKR PGE+Y+IRYHQSG+KGPA++LIHGFGGNA+HWAQNVPDLNPHYRV+ALDLLGYGYSDKPSPKGR PTELFNFETW+AMTEAF+ DI+H Q+       EE  GVY+VCNSVGGLVGLQLAVDRP LV+GVMLLNISLRMLHLKKQPW+LKPFVKALQTTLRETRLGQLFFAQVATP+GVKNALSQAYHDK RVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLP+V+VPVYIGWGEEDPW
Sbjct:   48 PLMVSTLDQETLP--PPKSTRPQLPTTFWTWKRGPGEDYRIRYHQSGDKGPAVILIHGFGGNADHWAQNVPDLNPHYRVFALDLLGYGYSDKPSPKGRAPTELFNFETWAAMTEAFVKDIVHEQALAGVSPSEE--GVYVVCNSVGGLVGLQLAVDRPDLVKGVMLLNISLRMLHLKKQPWFLKPFVKALQTTLRETRLGQLFFAQVATPQGVKNALSQAYHDKTRVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPRVDVPVYIGWGEEDPW 324          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: XP_024356405.1 (uncharacterized protein LOC112272657 [Physcomitrella patens] >PNR34527.1 hypothetical protein PHYPA_024344 [Physcomitrella patens])

HSP 1 Score: 321.2 bits (822), Expect = 3.800e-84
Identity = 148/256 (57.81%), Postives = 188/256 (73.44%), Query Frame = 0
Query:   83 TTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            T  W W+     E+ IRY ++G  GPA+VLIHGFGGN +HW +N+P L   +RV+A+DLLGYG+SDKP+P+ +PP  L++FETW +    F++D+++             D  +L+CNSVGG+VGL+ ++  P  VRG+ML+N+SLRMLHLKKQ WY++PFVKALQ  LR T LGQ FF  VA PE VK  L + YHD + VTDELVE IL PGL+PGAVDVFLDFI YSGGPLPEE+LP+V VPV I WGE+DPW
Sbjct:   94 TGTWKWR-----EHNIRYQRAGGSGPAVVLIHGFGGNCDHWRKNIPYLAKSHRVFAIDLLGYGFSDKPNPRDQPPNTLYSFETWGSQILDFLSDVVN-------------DRAFLICNSVGGVVGLEASLKDPQKVRGLMLVNVSLRMLHLKKQQWYVRPFVKALQNVLRTTTLGQQFFKSVAKPEAVKKILRECYHDDSAVTDELVEKILTPGLQPGAVDVFLDFICYSGGPLPEEMLPQVKVPVVIAWGEKDPW 331          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: XP_024032018.1 (uncharacterized protein LOC21402061 [Morus notabilis])

HSP 1 Score: 315.8 bits (808), Expect = 1.600e-82
Identity = 156/313 (49.84%), Postives = 203/313 (64.86%), Query Frame = 0
Query:   27 LIPPPALSPSTSSRCGSLIRNSRGPRGVQRVGPLVAS-VMDQAMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            + PPP     T     S  R      G+++ G ++ S + DQ         +   + T  W W+      Y IRY   G  GPALVLIHGFG N++HW +N+P L   +RVY++DL+GYGYSDKP+P+    T  + FETW+A    F  +++             KD  + +CNS+GG+VGLQ AV  P++ RGVMLLNISLRMLH+KKQPWY +PF+++ Q  LR T LGQ FF  VATPE V+N L Q YHD ++VT++LV++IL+PGLEPGAVDVFL+FI YSGGPLPEELLPKV  PV I WG++DPW
Sbjct:   27 ITPPPLNFTGTH----SFPRKIHTLSGLKKSGSVLFSRLNDQIAQKSLSTGSELQVQTKMWKWR-----GYTIRYQYCGTSGPALVLIHGFGANSDHWRKNIPILAKMHRVYSIDLIGYGYSDKPNPRQFGDTSFYTFETWAAQLNDFCKEVV-------------KDEAFFICNSIGGVVGLQAAVMEPTICRGVMLLNISLRMLHIKKQPWYGRPFIRSFQNLLRNTALGQYFFKSVATPEAVRNILCQCYHDTSQVTEDLVQSILQPGLEPGAVDVFLEFICYSGGPLPEELLPKVKCPVLIAWGDKDPW 317          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: XP_003614614.1 (pheophytinase, chloroplastic [Medicago truncatula] >AES97572.1 alpha/beta fold hydrolase [Medicago truncatula])

HSP 1 Score: 315.5 bits (807), Expect = 2.100e-82
Identity = 143/277 (51.62%), Postives = 189/277 (68.23%), Query Frame = 0
Query:   62 ASVMDQAMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            +S  +Q +  L  +     + T+ W WK      Y IRY  SG  GPALVL+HGFG N++HW +N+PDL   +RVY++DL+GYGYSDKP+P+       + F+TW+A    F  D++             KD  + +CNS+GG+VGLQ A+  P + +G++LLNISLRMLH+KKQPW+ +PF+ + Q  LR+T +G+ FF  VAT E VKN L Q YHD ++VTDELV+ IL PGLEPGAVDVFL+FI YSGGPLPEELLP+V  PV I WG++DPW
Sbjct:   35 SSFSNQIVSKLSIQNEELQVQTSMWNWK-----GYNIRYQYSGNNGPALVLVHGFGANSDHWRKNIPDLAKSHRVYSIDLIGYGYSDKPNPRQIGDDSFYTFDTWAAQLNEFCLDVV-------------KDEAFFICNSIGGVVGLQAAITEPQICKGILLLNISLRMLHIKKQPWFARPFISSFQRLLRDTSVGKFFFKAVATKESVKNILCQCYHDTSQVTDELVQLILSPGLEPGAVDVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPW 293          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: PON64144.1 (Alpha/beta hydrolase fold [Parasponia andersonii])

HSP 1 Score: 315.5 bits (807), Expect = 2.100e-82
Identity = 154/312 (49.36%), Postives = 204/312 (65.38%), Query Frame = 0
Query:   33 LSPSTS-SRCGSLIRNSRGPRGVQRVGPLVAS-----VMDQAMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            + PS S S+  SL R   G  G++  G +V S     V ++++       +   + T  W W+      Y IRY  SG  GPALVLIHGFG N++HW +N+P L   +RVY++DL+GYGYSDKP+P+    T  + FETW+     F  +++             KD  + +CNS+GG+VGLQ AV  P + +G+MLLNISLRMLH+KKQPW+ +PF+++ Q  LR T +GQ FF  VATPE V+N LSQ YHD  +VT+ELV++IL PGLEPGA DVFL+FI YSGGPLPEELLP+V  PV I WG++DPW
Sbjct:   25 IQPSLSLSKITSLPRKIYGFSGIKSDGFVVFSRLNDPVAEKSLASSTNNGSELQVRTRMWNWR-----GYSIRYQYSGTSGPALVLIHGFGANSDHWRKNIPVLAKSHRVYSIDLIGYGYSDKPNPRQFGDTSFYTFETWATQLNDFCKEVV-------------KDEAFFICNSIGGVVGLQAAVMEPKICKGIMLLNISLRMLHIKKQPWFGRPFIRSFQNLLRSTAVGQYFFKSVATPEAVRNILSQCYHDTTQVTEELVQSILLPGLEPGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPW 318          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: PON98058.1 (Alpha/beta hydrolase fold [Trema orientalis])

HSP 1 Score: 313.5 bits (802), Expect = 7.900e-82
Identity = 154/312 (49.36%), Postives = 204/312 (65.38%), Query Frame = 0
Query:   33 LSPSTS-SRCGSLIRNSRGPRGVQRVGPLVAS-----VMDQAMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            + PS S S+  SL R   G  G++  G +V S     V ++++       +   + T  W W+      Y IRY  SG  GPALVLIHGFG N++HW +N+P L   +RVY++DL+GYGYSDKP+P+    T  + FETW+     F  +++             +D  + +CNS+GG+VGLQ AV  P + +G+MLLNISLRMLH+KKQPW+ +PFV++ Q  LR T +GQ FF  VATPE V+N LSQ YHD  +VT+ELV++IL PGLEPGA DVFL+FI YSGGPLPEELLP+V  PV I WG++DPW
Sbjct:   25 IQPSLSLSKITSLPRKIYGFSGIKSDGCVVFSRLNDPVAEKSLASSTNNGSELQVHTRTWNWR-----GYSIRYQYSGTIGPALVLIHGFGANSDHWRKNIPVLGKSHRVYSIDLIGYGYSDKPNPRQFGDTSFYTFETWATQLNDFCKEVV-------------EDEAFFICNSIGGVVGLQAAVMEPKICKGIMLLNISLRMLHIKKQPWFGRPFVRSFQNLLRSTAVGQYFFKSVATPEAVRNILSQCYHDTTQVTEELVQSILLPGLEPGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPW 318          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: XP_021593649.1 (uncharacterized protein LOC110600993 isoform X1 [Manihot esculenta] >OAY28972.1 hypothetical protein MANES_15G108100 [Manihot esculenta])

HSP 1 Score: 312.4 bits (799), Expect = 1.800e-81
Identity = 142/261 (54.41%), Postives = 184/261 (70.50%), Query Frame = 0
Query:   78 RPDLPTTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            +P++ ++ W WK      Y IRY  SG  GPALVL+HGFG N++HW +N+P L   +RVY++DL+GYGYSDKP+P+       + F+TW+     F  D+I             KD  + +CNS+GGLVGLQ AV  P + RG++LLNISLRMLH+KKQPW+ +PF+++ Q+ L+ T LG+LFF  VAT E V+N L Q YHD A+VT+ELV+ IL PGLEPGAVDVFLDFI YS GPLPEELLP+V  PV I WG++DPW
Sbjct:   89 KPEVQSSIWKWK-----GYSIRYQYSGNSGPALVLVHGFGANSDHWRKNIPVLAKKHRVYSIDLIGYGYSDKPNPREFGDNSFYTFQTWATQLNDFCADVI-------------KDKAFFICNSIGGLVGLQAAVMEPQMCRGIVLLNISLRMLHIKKQPWFGRPFIRSFQSLLKNTALGKLFFKSVATSESVRNILCQCYHDTAQVTEELVQKILLPGLEPGAVDVFLDFICYSDGPLPEELLPQVKCPVLIAWGDKDPW 331          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: XP_018443169.1 (PREDICTED: pheophytinase, chloroplastic [Raphanus sativus])

HSP 1 Score: 312.0 bits (798), Expect = 2.300e-81
Identity = 151/291 (51.89%), Postives = 194/291 (66.67%), Query Frame = 0
Query:   48 SRGPRGVQRVGPLVASVMDQAMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            SR P+G   V    +S  ++A      +   P++ T  W WK      Y IRY  +G  GPALVL+HGFG N++HW +N P L   YRVY++DL+GYGYSDKP+P+       + FETW      F  D++             KD  + +CNS+GGLVGLQ AV +P + RG+ML+NISLRMLH+KKQP+  +PF+++ Q  LR T +G+LFF  +A PE V++ LSQ YHD ++VTDELVEAILKPGLEPGAVDVFL+FI YSGGPLPE+LLP V  PV I WGE+DPW
Sbjct:   50 SRTPKGTGSVS--CSSATEKASSTF--EDVSPEVRTLTWNWK-----GYSIRYQCAGTSGPALVLVHGFGANSDHWRKNTPILGKSYRVYSIDLIGYGYSDKPNPREFGGKPFYTFETWGDQLNDFCLDVV-------------KDEAFFICNSIGGLVGLQAAVSKPEICRGLMLINISLRMLHIKKQPFIARPFIRSFQNLLRNTPVGKLFFKSIAKPETVRSILSQCYHDSSQVTDELVEAILKPGLEPGAVDVFLEFICYSGGPLPEDLLPLVKCPVLIAWGEKDPW 318          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: XP_010535924.1 (PREDICTED: pheophytinase, chloroplastic [Tarenaya hassleriana])

HSP 1 Score: 311.6 bits (797), Expect = 3.000e-81
Identity = 143/260 (55.00%), Postives = 183/260 (70.38%), Query Frame = 0
Query:   79 PDLPTTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            P + T  W W+      Y IRY  +G+ GPALVL+HGFG N++HW +N+P L   +RVY++DL+GYGYS KP+P+       + FETW      F  D++             KD  + +CNS+GGLVGLQ AV +P + +G+MLLNISLRMLH+KKQP+  KPF+++ Q  LR + +G+LFF  VATPE V+N L Q YHD+ +VTDELVEAIL+PGLEPGAVDVFL+FI YSGGPLPEELLP V  PV IGWG++DPW
Sbjct:   92 PQVRTLTWNWR-----GYSIRYQCAGDSGPALVLVHGFGANSDHWRKNIPFLGKSHRVYSIDLIGYGYSSKPNPREFGGKPFYTFETWGDQLNDFCLDVV-------------KDEAFFICNSIGGLVGLQAAVSKPQICKGLMLLNISLRMLHIKKQPFIAKPFIRSFQNLLRNSPVGKLFFKSVATPESVRNILRQCYHDRTQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLPEELLPLVQCPVLIGWGDKDPW 333          
BLAST of NO06G01470 vs. NCBI_GenBank
Match: XP_007205351.1 (pheophytinase, chloroplastic isoform X1 [Prunus persica] >ONI01511.1 hypothetical protein PRUPE_6G143300 [Prunus persica])

HSP 1 Score: 311.2 bits (796), Expect = 3.900e-81
Identity = 145/271 (53.51%), Postives = 185/271 (68.27%), Query Frame = 0
Query:   73 PKKTTRPDLP-----TTFWIWKRSPGEEYKIRYHQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKPSPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCNSVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTTLRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPGAVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPW 339
            P+ T   + P     +  W W+      Y IRY  +G +GPALVLIHGFG N++HW +N+P L   +RVY++DL+GYGYSDKP+P+    +  + FETW      F  D++             KD  + +CNS+GGLVGLQ AV  P L +G+MLLNISLRMLH+KKQPWY +P +++ Q  LR T +G+ FF  VATPE V+N L Q YHD ++VT+ELV+ IL PGLEPGAVDVFL+FI YSGGPLPEELLP+V  PV IGWGE+DPW
Sbjct:   69 PEATANNNAPEVQVQSRIWNWR-----AYSIRYQHAGNRGPALVLIHGFGANSDHWRKNIPVLAKSHRVYSIDLIGYGYSDKPNPRQFGESSFYTFETWGTQLNDFCIDVV-------------KDEAFFICNSIGGLVGLQAAVMEPQLCKGIMLLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTDVGKYFFKTVATPESVRNILCQCYHDTSQVTEELVQKILLPGLEPGAVDVFLEFICYSGGPLPEELLPQVKCPVLIGWGEKDPW 321          
The following BLAST results are available for this feature:
BLAST of NO06G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26182.11.300e-13783.99alpha beta fold family protein [Nannochloropsis ga... [more]
XP_024356405.13.800e-8457.81uncharacterized protein LOC112272657 [Physcomitrel... [more]
XP_024032018.11.600e-8249.84uncharacterized protein LOC21402061 [Morus notabil... [more]
XP_003614614.12.100e-8251.62pheophytinase, chloroplastic [Medicago truncatula]... [more]
PON64144.12.100e-8249.36Alpha/beta hydrolase fold [Parasponia andersonii][more]
PON98058.17.900e-8249.36Alpha/beta hydrolase fold [Trema orientalis][more]
XP_021593649.11.800e-8154.41uncharacterized protein LOC110600993 isoform X1 [M... [more]
XP_018443169.12.300e-8151.89PREDICTED: pheophytinase, chloroplastic [Raphanus ... [more]
XP_010535924.13.000e-8155.00PREDICTED: pheophytinase, chloroplastic [Tarenaya ... [more]
XP_007205351.13.900e-8153.51pheophytinase, chloroplastic isoform X1 [Prunus pe... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000305NSK000305Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100072g9gene4343Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01470.3NO06G01470.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G01470.2NO06G01470.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G01470.1NO06G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01470.3NO06G01470.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G01470.2NO06G01470.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G01470.1NO06G01470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01470 ID=NO06G01470|Name=NO06G01470|organism=Nannochloropsis oceanica|type=gene|length=2157bp
AGTAGGCTAGGAAAACATGCCGGCCCCGTCACGACCGAACGCGGGGCTGC
TTTCCATGCTTTTTTTGCTATTGGGCTGCTGCGTGCATGCTTTCCTCATT
CCACCGCCTGCGCTGTCACCATCAACATCTTCACGATGTGGATCACTGAT
AAGAAACAGCAGAGGCCCGAGGGGTGTGCAGCGAGTCGGACCTTTGGTAG
CCTCGGTAATGGACCAAGgtatatgtcgggagtgaaagaaatcatgttgt
cataacatgttccgtgtaaaatagagtgtcaggagggaggggaggtcgaa
gatgtggcaacgcgcagcccgagtgtgtggcataagtgcatgtgcttctt
tataagtgcgtggatgaaggtttctagaaattaacgactaccatctaaat
tctgcatttctcattcccctccatcaacaagCCATGCCAGGCCTCCCGAA
GAAGACGACGCGCCCAGACTTGCCCACTACATTTTGGATCTGGAAGCGAA
GCCCTGGCGAGGAGTACAAGATTCGATACCACCAAAGTGGAGAAAAGGGC
CCTGCGCTTGTTTTGATTCATGgtgcgttggttgtggaaattgaagggag
aagacgggtgggagcgggacagaaacggaatgatcggaggactggaaggc
agaggagatgctattttggaatcaagatgtacacaacatgcaccacattt
tatgaatcgtcatttattcactcatataccactgtatccttgacagGATT
TGGCGGTAATGCCAACCATTGGGCGCAGAATGTACCTGATCTCAACCCGC
ACTACCGCGTTTATGCACTGGATCTGCTAGgtaagcatgaaggataagaa
cgagaggagaaggagagaggcaaagagcgtcacgtgggacatgacacaga
agatatggaccggaaaatggatcgagtcgcgttccacagacggccgatta
atatactcactgagaattacctaaccctccctccctccttccctccctcc
ctccttccctccctctcttctgcagGCTACGGATATAGCGACAAGCCCTC
TCCCAAGGGCCGGCCCCCCACTGAGCTGTTTAATTTTGAGACCTGGTCGG
CCATGACTGAGGCATTCATCACAGATATCATCCACCCACAATCCCCGCTG
GATAAACCGGAGGAGGAAGAGAAAGATGGGGTCTACTTGGTCTGCAACAG
TGTCGGGGGGCTGGTCGGGCTCCAGTTGGCAGTTGACAGGCCTTCCCTAG
TCCGCGGCGTCATGCTCCTCAACATTTCCCTCCGCATGCTCCACCTCAAA
AAACAGCCCTGGTACCTCAAGCCCTTCGTCAAAGCCCTACAAACCACCCT
ACGGGAGACCAGACTGGGGCAGCTTTTCTTCGCACAAGTCGCCACCCCCG
AGGGCGTGAAGAATGCTCTCTCGCAAGCCTACCACGATAAGGCTAGGGTC
ACCGACGAGCTGGTCGAAGCAATCCTAAAGCCAGGGTTGGAGCCCGGGGC
GGTGGATGTATTTCTTGATTTTATCTCTTATTCGGGAGGTCCCCTGCCGG
AAGAGCTGTTGCCGAAAGTGAATGTTCCTGTTTACATCGGCTGGGGGGAA
GAGGATCCATGGTATGTTTGAAAGATTAGGAGGAAGCGAGGAGAGGGAGG
AAGCGAGAGAGGGAGAGCACCTTTGGTTTTTCCAAAGACATCATACAGGA
ATGATGTGAAAGGAGGCTGCGACGATATTGTTCACCTCCTCTACCTATTA
TATTCTTTCTTATATTTTTTGTCACAAATAGGGAGCCCATTGCCTTGGGT
CGTGCCTATGGCGAGTTCCCCTGCGTCCGCGAGTTCAGGCCCTTCCCTCT
TCTTGGCCACTGCCCTATGGgtgagtgagaatatatggaggtggctttat
ttggttattgtgtctgtgtgggttatgattttactcgtccactcacaaat
caccctgtattcactttcatacctcctccttccccattccctcccacacg
gatggcatacacagACGAAGGCCCTGACATTATCGACCCCTTTATTAGAG
AGATGGTTGATACACTCGAGCAGGAACGAAAGACTGCTGCACTGAAGTGA
TTTAAAGATTGTGGGTGGTTTGTGATAATAAAAGGGGAGGAAAAAAAGCA
AAATGCA
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protein sequence of NO06G01470.3

>NO06G01470.3-protein ID=NO06G01470.3-protein|Name=NO06G01470.3|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp
MPAPSRPNAGLLSMLFLLLGCCVHAFLIPPPALSPSTSSRCGSLIRNSRG
PRGVQRVGPLVASVMDQAMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRY
HQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKP
SPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCN
SVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTT
LRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPG
AVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPWYV*
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protein sequence of NO06G01470.2

>NO06G01470.2-protein ID=NO06G01470.2-protein|Name=NO06G01470.2|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp
MPAPSRPNAGLLSMLFLLLGCCVHAFLIPPPALSPSTSSRCGSLIRNSRG
PRGVQRVGPLVASVMDQAMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRY
HQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKP
SPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCN
SVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTT
LRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPG
AVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPWYV*
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protein sequence of NO06G01470.1

>NO06G01470.1-protein ID=NO06G01470.1-protein|Name=NO06G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=396bp
MPAPSRPNAGLLSMLFLLLGCCVHAFLIPPPALSPSTSSRCGSLIRNSRG
PRGVQRVGPLVASVMDQAMPGLPKKTTRPDLPTTFWIWKRSPGEEYKIRY
HQSGEKGPALVLIHGFGGNANHWAQNVPDLNPHYRVYALDLLGYGYSDKP
SPKGRPPTELFNFETWSAMTEAFITDIIHPQSPLDKPEEEEKDGVYLVCN
SVGGLVGLQLAVDRPSLVRGVMLLNISLRMLHLKKQPWYLKPFVKALQTT
LRETRLGQLFFAQVATPEGVKNALSQAYHDKARVTDELVEAILKPGLEPG
AVDVFLDFISYSGGPLPEELLPKVNVPVYIGWGEEDPWEPIALGRAYGEF
PCVREFRPFPLLGHCPMDEGPDIIDPFIREMVDTLEQERKTAALK*
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