NO06G01330, NO06G01330 (gene) Nannochloropsis oceanica

Overview
NameNO06G01330
Unique NameNO06G01330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1108
Alignment locationchr6:429358..430465 -

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic translation initiation factor 3 subunit G
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:429358..430465 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003676nucleic acid binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR017334eIF3_g
IPR024675eIF3g_N
IPR000504RRM_dom
Homology
BLAST of NO06G01330 vs. NCBI_GenBank
Match: EWM26171.1 (initiation factor 3g [Nannochloropsis gaditana])

HSP 1 Score: 433.0 bits (1112), Expect = 8.300e-118
Identity = 224/316 (70.89%), Postives = 241/316 (76.27%), Query Frame = 0
Query:    1 MSRDMKDWGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQSIAIEDPNSLAEEEPAADIKNLGLIRQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDTTLNYSTASNLTHGTER 317
            MSR+++DWGDYEDDEELPQ VE  PD+NGVVTRT W WKD RKVRYVQKF+VEE+ T VPKRTF RKTWARFGDA DAHVRAEEQSIAIEDP+SLAE+EPAAD+KNLGLI+QKL ARK GLLPS+ PG+S+AEY  G                                                EEDKFPT+RVTNVSEDTTDDDLK LFGRFG LHRVFLAKDKERNTSRGFAFVSFL K DAQ+AMD LQGYGYDHLILRLEWANPPTQRREER     GL+ GFVSGYGQRLAQDTT+ YSTASNLTHGTER
Sbjct:   13 MSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGG------------SGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREER----DGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER 312          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_005853381.1 (translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526] >EKU22978.1 translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 431.4 bits (1108), Expect = 2.400e-117
Identity = 223/316 (70.57%), Postives = 240/316 (75.95%), Query Frame = 0
Query:    1 MSRDMKDWGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQSIAIEDPNSLAEEEPAADIKNLGLIRQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDTTLNYSTASNLTHGTER 317
            MSR+++DWGDYEDDEELPQ VE  PD+NGVVTRT W WKD RK RYVQKF+VEE+ T VPKRTF RKTWARFGDA DAHVRAEEQSIAIEDP+SLAE+EPAAD+KNLGLI+QKL ARK GLLPS+ PG+S+AEY  G                                                EEDKFPT+RVTNVSEDTTDDDLK LFGRFG LHRVFLAKDKERNTSRGFAFVSFL K DAQ+AMD LQGYGYDHLILRLEWANPPTQRREER     GL+ GFVSGYGQRLAQDTT+ YSTASNLTHGTER
Sbjct:  448 MSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKARYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGG------------SGIGGMNGGEEGAPRRTMGERFGGGGPGPQMGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREER----DGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER 747          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: GBG29776.1 (Eukaryotic translation initiation factor 3 subunit G [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 159.5 bits (402), Expect = 1.800e-35
Identity = 114/319 (35.74%), Postives = 157/319 (49.22%), Query Frame = 0
Query:    5 MKDWGDYED--------DEELPQAVESGPDQNGVVTRTHWDWKDGRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQS-------IAIEDP---NSLAEEEPAADIKNL---GLIRQKLE---ARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            M DW D +D        D+ LP+A E GPD  G+ T   +  +DG+K + ++K +V   + +V KR  ER  W +FG A DA    EE++       + IE+P   N   + E    IK L    L R+K E   A++  +L S   G       A                                                 EE+   TLRVTN+SEDTT+DDL+ LF  FG + RV+LA+D+E   SRGFA++SF  + DAQRAMD+L G+GYDHLIL++EWA P T  R++ G     + +G VSGYG  L Q+
Sbjct:    1 MADWADDDDNVDVTTELDDYLPEAYEEGPDDKGIKTLVSFRIQDGQKQKVIRKVKVVTKKKKVSKRIQERLAWKKFGLAEDAPPGPEEETTIVSRDDVHIENPGDENKAQKREEDEMIKRLRSGALNRKKREEFAAKESTILGSEGMGQGLRTGTA-----------LSQMADAPSSLAAAGGPGGKYVPMHLRGGDAAASMSRFEEEDQTTLRVTNISEDTTEDDLRDLFQPFGRIQRVYLARDRETQISRGFAYISFHYRDDAQRAMDKLNGFGYDHLILKVEWAKPST--RDDAGT-QSVMKAGIVSGYGGALPQN 305          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_024581228.1 (eukaryotic translation initiation factor 3g1 [Plasmopara halstedii] >CEG44859.1 eukaryotic translation initiation factor 3g1 [Plasmopara halstedii])

HSP 1 Score: 158.3 bits (399), Expect = 3.900e-35
Identity = 110/318 (34.59%), Postives = 150/318 (47.17%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E+D+ LPQ  ES PD NGV     W   + G KV+ ++K +      R+ KR  ERK WA+FGDA +        ++  EE  + ++DPN+          EE   A +KN  ++             L+   K         D     ++G                                                  D   TLRVTNVS DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P T   +   E  G + + F SGYG+ L Q+
Sbjct:    8 WGD-EEDDLLPQRTESEPDSNGVRQIIEWKVNEAGDKVKIIKKVKXXTEVERISKRALERKKWAKFGDALNDGDGSNVTYMSYEE--VKLDDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKDELEQDMAKRAESGETAEAAASSANLGARSSALDDASGPSKYVPPGLRGRVGATGGDAGGDNARDDSATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPST---KPANEDAGSMGTTFRSGYGKALPQN 319          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: OWZ16574.1 (Eukaryotic translation initiation factor 3 subunit G [Phytophthora megakarya])

HSP 1 Score: 157.5 bits (397), Expect = 6.700e-35
Identity = 139/320 (43.44%), Postives = 172/320 (53.75%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E+D+ LPQ VES PD NGV     W   D G KV+  +K +      RV KR  ERK WA+FGDA D        ++  EE  + +EDPN+          EE   A +KN  ++             L+   K         D     +AG  XXXXXXXXXXXXXXX                         XXXXXXXX  D   TLRVTNVS DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA++AM +LQGYGYDHLIL+LEWA P  +  +   E  G + + F SGYG+ L Q+
Sbjct:    8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKLNDAGDKVKVTKKVKKVTEVERVSKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VTLEDPNADQILPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAEAGEXXXXXXXXXXXXXXXXALDGAFGSSKYVPPSLRGRAGAGGDXXXXXXXXXXDDSCTLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKAMAKLQGYGYDHLILKLEWAKPSNKPAQ---EDAGSMGTTFRSGYGKALPQN 321          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: POM81424.1 (Eukaryotic translation initiation factor 3 subunit G [Phytophthora palmivora var. palmivora])

HSP 1 Score: 156.0 bits (393), Expect = 2.000e-34
Identity = 139/320 (43.44%), Postives = 174/320 (54.37%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGD--SYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E+D+ LPQ VES PD NGV     W   + G KV+  +K +      R+ KR  ERK WA+FGDA D        ++  EE  + +EDPN+          EE   A +KN  ++             L+   K         D    AE    XXXXXXXXXXXXXXXXX                      XXXXXXXX   D   TLRVTNVS DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA++AM++LQGYGYDHLIL+LEWA P  +  +   E  G + + F SGYG+ L Q+
Sbjct:    8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKVNEAGDKVKITKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VTLEDPNADQILPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAEXXXXXXXXXXXXXXXXXXXXXLDGAFVSSKYVPPSLRGRAGAGXXXXXXXXNSRDDSCTLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKAMNKLQGYGYDHLILKLEWAKPSNKPAQ---EDAGSMGTTFRSGYGKALPQN 321          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: ETI45427.1 (hypothetical protein F443_09995 [Phytophthora parasitica P1569] >ETK85372.1 hypothetical protein L915_09799 [Phytophthora parasitica] >ETL38799.1 hypothetical protein L916_09704 [Phytophthora parasitica] >ETL91923.1 hypothetical protein L917_09624 [Phytophthora parasitica] >ETM45215.1 hypothetical protein L914_09672 [Phytophthora parasitica] >ETO74063.1 hypothetical protein F444_10093 [Phytophthora parasitica P1976] >ETP15229.1 hypothetical protein F441_09948 [Phytophthora parasitica CJ01A1] >ETP43308.1 hypothetical protein F442_09902 [Phytophthora parasitica P10297])

HSP 1 Score: 154.5 bits (389), Expect = 5.700e-34
Identity = 117/318 (36.79%), Postives = 155/318 (48.74%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E+D+ LPQ VES PD NGV     W   + G KV+  +K +      R+ KR  ERK WA+FGDA D        ++  EE  + +EDPN+          EE   A +KN  ++             L+   K         D     ++G                                          XXXXXX  D   TLRVTNVS DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P  +      +  G + + F SGYG+ L Q+
Sbjct:    8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VKLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESGEAAAPAAASAEPAARGSALDGAFGSSKYVPPSLRGRAGAGGDXXXXXXXXDS-ATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPSNKPAH---DDAGSMGTTFRSGYGKALPQN 318          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_008893074.1 (hypothetical protein PPTG_01498 [Phytophthora parasitica INRA-310] >ETN21259.1 hypothetical protein PPTG_01498 [Phytophthora parasitica INRA-310] >KUF83585.1 Eukaryotic translation initiation factor 3 subunit G [Phytophthora nicotianae])

HSP 1 Score: 154.5 bits (389), Expect = 5.700e-34
Identity = 117/318 (36.79%), Postives = 155/318 (48.74%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E+D+ LPQ VES PD NGV     W   + G KV+  +K +      R+ KR  ERK WA+FGDA D        ++  EE  + +EDPN+          EE   A +KN  ++             L+   K         D     ++G                                          XXXXXX  D   TLRVTNVS DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P  +      +  G + + F SGYG+ L Q+
Sbjct:    8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VKLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESGEAAAPAAASAEPAARGSALDGAFGSSKYVPPSLRGRAGAGGDXXXXXXXXDS-ATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPSNKPTH---DDAGSMGTTFRSGYGKALPQN 318          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: KUF87986.1 (hypothetical protein AM588_10001651 [Phytophthora nicotianae])

HSP 1 Score: 154.5 bits (389), Expect = 5.700e-34
Identity = 111/318 (34.91%), Postives = 149/318 (46.86%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E+D+ LPQ VES PD NGV     W   + G KV+  +K +      R+ KR  ERK WA+FGDA D        ++  EE  + +EDPN+          EE   A +KN  ++             L+   K         D     ++G                                                  D   TLRVTNVS DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P  +      +  G + + F SGYG+ L Q+
Sbjct:    8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VKLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESG---------------EAAAPAAASASLPLVVPLWTAPLAPASDAGGDSSRDDSATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPSNKPTH---DDAGSMGTTFRSGYGKALPQN 304          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_009526349.1 (hypothetical protein PHYSODRAFT_559962 [Phytophthora sojae] >EGZ17291.1 hypothetical protein PHYSODRAFT_559962 [Phytophthora sojae])

HSP 1 Score: 154.1 bits (388), Expect = 7.400e-34
Identity = 126/322 (39.13%), Postives = 160/322 (49.69%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E+D+ LPQ  ES PD  GV     W   D G KV+  +K +      RV KR  ERK WA+FGDA D        ++  EE  + +EDPN+          EE   A +KN  ++             L+   K         D     +AG    XXXXXXXXXXXXX                                     D   TLRVTNVS DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P     +   E  G + + F SGYG+ L Q+
Sbjct:    8 WGD-EEDDVLPQRTESEPDSQGVRQIVEWKLNDAGDKVKVTKKIKKVTEVERVSKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VKLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAEAGESAXXXXXXXXXXXXXXRGSALDGAFGSSKYVPPSLRGRAGGSGGDVGGGDNSRDDSATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFVYREDAEKALNKLQGYGYDHLILKLEWAKP---SNKPANEDAGSMGTTFRSGYGKALPQN 323          
The following BLAST results are available for this feature:
BLAST of NO06G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26171.18.300e-11870.89initiation factor 3g [Nannochloropsis gaditana][more]
XP_005853381.12.400e-11770.57translation initiation factor 3 subunit G [Nannoch... [more]
GBG29776.11.800e-3535.74Eukaryotic translation initiation factor 3 subunit... [more]
XP_024581228.13.900e-3534.59eukaryotic translation initiation factor 3g1 [Plas... [more]
OWZ16574.16.700e-3543.44Eukaryotic translation initiation factor 3 subunit... [more]
POM81424.12.000e-3443.44Eukaryotic translation initiation factor 3 subunit... [more]
ETI45427.15.700e-3436.79hypothetical protein F443_09995 [Phytophthora para... [more]
XP_008893074.15.700e-3436.79hypothetical protein PPTG_01498 [Phytophthora para... [more]
KUF87986.15.700e-3434.91hypothetical protein AM588_10001651 [Phytophthora ... [more]
XP_009526349.17.400e-3439.13hypothetical protein PHYSODRAFT_559962 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR145ngnoR145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000320NSK000320Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01330.1NO06G01330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100121g8gene4358Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01330.1NO06G01330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01330 ID=NO06G01330|Name=NO06G01330|organism=Nannochloropsis oceanica|type=gene|length=1108bp
ATGTCTCGCGACATGAAGGACTGGGGGGATTACGAGGATGATGAGGAGCT
CCCGCAAGCAGTGGAGgtaagtcttgtgtttgttgcttgtgggaaaagga
agggtgggtggcaaaatattgagagacttggatggcgttgaaatgaggtc
ctgcctttacctcgcatgaacacctccttcctcctttcccccccaacttc
ttctcccactacacacacgatagAGCGGCCCTGATCAGAATGGGGTGGTG
ACACGGACGCACTGGGACTGGAAGGACGGCCGCAAGGTCCGCTACGTCCA
GAAATTTCGAGTGGAGGAGGTCAGGACCCGCGTGCCCAAGCGAACCTTCG
AACGCAAGACCTGGGCCCGGTTCGGAGACGCATGTGATGCCCATGTTCGC
GCAGAGGAACAGAGCATTGCGATTGAGGACCCGAATAGTCTAGCGGAGGA
AGAGCCGGCAGCGGACATTAAAAATTTGGGGTTGATTCGACAGAAGCTCG
AGGCCCGAAAGAAGGGCTTGTTACCGTCGTCGGCGCCAGGGGATTCCTAC
GCCGAATATCAGGCAGGGGGAGGGGGAGGGATGGGGGTAGGCGGGGAGGA
GGGGGGGATGCGAGGCGGAATGATGGGCGGGGGTACGGGAAGGACTATGG
GGGAGAGGTTTGGTGCGGGTGGAGGGGGAGGGCCGGGGCCTCAGGGTGGA
CCTGGGGGGAGGGAGGAAGACAAGTTCCCTACACTTCGTGTGACGAATGT
ATCGGAGGACACGACGGACGATGATTTGAAGCAGTTGTTTGGGCGGTTTG
GGTCATTGCATCGTGTGTTCCTTGCCAAGGATAAGGAACGAAATACCAGC
CGGGGGTTTGCGTTTGTCTCTTTCCTCAGTAAGAGCGATGCCCAGAGGGC
CATGGATGAGTTACAGGGGTACGGGTACGATCACTTGATTCTTCGGTTGG
AGTGGGCCAATCCCCCGACGCAGAGGAGGGAGGAGAGGGGAGAGGGCTTG
GGGGGGCTGTCGTCAGGGTTTGTATCCGGGTACGGGCAGAGGCTTGCGCA
GGATACGACGTTGAATTACTCAACGGCCTCGAATCTAACGCATGGGACAG
AGAGATAA
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protein sequence of NO06G01330.1

>NO06G01330.1-protein ID=NO06G01330.1-protein|Name=NO06G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MSRDMKDWGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGRKVRYVQKF
RVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQSIAIEDPNSLAEEEP
AADIKNLGLIRQKLEARKKGLLPSSAPGDSYAEYQAGGGGGMGVGGEEGG
MRGGMMGGGTGRTMGERFGAGGGGGPGPQGGPGGREEDKFPTLRVTNVSE
DTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMD
ELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDT
TLNYSTASNLTHGTER*
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Synonyms
Publications