NO06G01170, NO06G01170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_015477470.1 (cupin domain-containing protein [Pseudomonas sp. ATCC 13867] >AGI24614.1 hypothetical protein H681_13720 [Pseudomonas sp. ATCC 13867]) HSP 1 Score: 226.9 bits (577), Expect = 1.200e-55 Identity = 116/239 (48.54%), Postives = 156/239 (65.27%), Query Frame = 0 Query: 28 SEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPR---DAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 S W +R+GPF EE F+D P ER WT+LVQ VD+ +PEVA+LL+ F+FLP+WR+DD+MISYA GG+GPH DNYDVFLLQ HG RRW I + D S +LP++ +R+L +EE WVL PGDMLYLPPRV H G++ D DCMTYS+GFRAP+ AE+L + YSD ++ + D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 66 SPWELRRGPFKEETFKDLP---ERDWTLLVQAVDQFIPEVAELLEHFKFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGHRRWKIGQT----CDASSPMLPHADLRILAEFEESAEWVLEPGDMLYLPPRVAHYGIAED-DCMTYSVGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMSAVKGDEDQHKIQSDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 289
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_045214771.1 (cupin domain-containing protein [Pseudomonas sp. 21] >KJJ97959.1 cupin [Pseudomonas sp. 21]) HSP 1 Score: 226.9 bits (577), Expect = 1.200e-55 Identity = 115/240 (47.92%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPR---DAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 DS W +R+GPF E+ F P ER WT+LVQ VD+ +PEVA+LL+ F+FLP+WR+DD+MISYA GG+GPH DNYDVFLLQ HG RRW + + D S +LP++ +R+L +EE WVL PGDMLYLPPRV H G++ D DCMTYS+GFRAP+ AE+L + YSD +A + D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 65 DSPWELRRGPFQEDTFSQMP---ERDWTLLVQAVDQFIPEVAELLEHFKFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGRRRWKVGQT----CDASSPMLPHADLRILAEFEESADWVLEPGDMLYLPPRVAHYGIAED-DCMTYSVGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMAAMKGDFDQHQIQRDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 289
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_081520484.1 (cupin domain-containing protein [Pseudomonas sp. T] >OQR28543.1 cupin [Pseudomonas sp. T]) HSP 1 Score: 226.9 bits (577), Expect = 1.200e-55 Identity = 115/240 (47.92%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPR---DAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 DS W +R+GPF E+ F P ER WT+LVQ VD+ +PEVA+LL+ F+FLP+WR+DD+MISYA GG+GPH DNYDVFLLQ HG RRW + + D S +LP++ +R+L +EE WVL PGDMLYLPPRV H G++ D DCMTYS+GFRAP+ AE+L + YSD +A + D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 65 DSPWELRRGPFQEDTFSQMP---ERDWTLLVQAVDQFIPEVAELLEHFKFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGRRRWKVGQT----CDASSPMLPHADLRILAEFEESADWVLEPGDMLYLPPRVAHYGIAED-DCMTYSVGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMAAMKGDFDQHQIQRDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 289
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_019623280.1 (cupin domain-containing protein [Amphritea japonica]) HSP 1 Score: 226.5 bits (576), Expect = 1.500e-55 Identity = 105/236 (44.49%), Postives = 149/236 (63.14%), Query Frame = 0 Query: 28 SEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 ++W ++ GPFDE F PE WT+LVQ VD VPE +D+++ FRF+PNWR DD+M+S+A Q GG+GPH DNYDVFL+Q+ G RRW + D+ S PN+PV ++ WE +++WVL PGDMLY+PP+V HNG+ DCMTYS+GFRAP+ AE++ + ++ Y+D L L + GEI AL +++E+ S L D+ L W+GK +T P+ Sbjct: 63 ADWDIQHGPFDEATFSSLPES---HWTLLVQAVDHWVPEASDIVEQFRFIPNWRYDDLMVSFASQGGGVGPHYDNYDVFLIQTQGQRRWEVGGFY----DQNSPRRPNTPVMIMTEWEPEYNWVLEPGDMLYIPPQVGHNGIGESDDCMTYSVGFRAPSHAEIMRS---FTDFIGEKLTSESRYTDPDLLLQDNPGEIPAEALEKVREI----FTSYLQDDARLGEWLGKFVTDPK 284
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_037012450.1 (MULTISPECIES: cupin domain-containing protein [Pseudomonas] >OBY90180.1 cupin [Pseudomonas sp. AU11447] >SNS81779.1 50S ribosomal protein L16 3-hydroxylase [Pseudomonas nitroreducens]) HSP 1 Score: 226.1 bits (575), Expect = 2.000e-55 Identity = 114/240 (47.50%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPR---DAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 DS W +R+GPF E+ F P ER WT+LVQ VD+ +PEVA+LL+ F+FLP+WR+DD+MISYA GG+GPH DNYDVFLLQ HG RRW + + D S +LP++ +R+L +EE WVL PGDMLYLPPR+ H G++ D DCMTYS+GFRAP+ AE+L + YSD +A + D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 65 DSPWELRRGPFQEDTFSQMP---ERDWTLLVQAVDQFIPEVAELLEHFKFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGHRRWKVGQT----CDASSPMLPHADLRILAEFEESAEWVLEPGDMLYLPPRIAHYGIAED-DCMTYSVGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMAAMKGDFDQHQIQRDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 289
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_098074494.1 (cupin domain-containing protein [Longibacter salinarum] >PEN14316.1 cupin [Longibacter salinarum]) HSP 1 Score: 226.1 bits (575), Expect = 2.000e-55 Identity = 116/249 (46.59%), Postives = 155/249 (62.25%), Query Frame = 0 Query: 23 EDEKDSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWS-----IQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQTR 267 E+ + W +R GPFDEEDF PE WTVLVQEVDR +PEVADLL +F F+P WR+DD+M+SYAP+ G +G H+DNYDVFLLQ GTRRW +QN ++P+ VR+L +E D VL PGDMLYLPPRV H+GVSLD +CMTYSIGFRAP+ EL+ Y D L +P + GEI+ +AL+ ++ +++ S+ +D+ + RW G +T P++ R Sbjct: 60 EEGGEKPWELRFGPFDEEDFLSLPES---KWTVLVQEVDRLIPEVADLLDAFAFVPKWRIDDVMVSYAPKDGNVGAHIDNYDVFLLQGQGTRRWEWGEEPVQN---------EEIVPDLDVRMLKDFEADREAVLEPGDMLYLPPRVAHHGVSLDDECMTYSIGFRAPSHEELI---ADFMQYAMERIDPDARYGDPDLTVPDEPGEISADALASIRGLLR----SLTEDDDTIDRWFGAFVTEPKRDR 289
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_024765134.1 (MULTISPECIES: cupin domain-containing protein [Pseudomonas] >OBY58270.1 cupin [Pseudomonas sp. AU12215]) HSP 1 Score: 225.7 bits (574), Expect = 2.600e-55 Identity = 114/240 (47.50%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPR---DAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 DS W +R+GPF E+ F P ER WT+LVQ VD+ +PEVA+LL+ F+FLP+WR+DD+MISYA GG+GPH DNYDVFLLQ HG RRW + + D S +LP++ +R+L +EE WVL PGDMLYLPPR+ H G++ D DCMTYS+GFRAP+ AE+L + YSD +A + D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 65 DSPWELRRGPFQEDTFSQMP---ERDWTLLVQAVDQFIPEVAELLEHFKFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGHRRWKVGQT----CDASSPMLPHADLRILAEFEESAEWVLEPGDMLYLPPRIAHYGIAED-DCMTYSVGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMAALKGDFDQHQIQRDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 289
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_088421497.1 (cupin domain-containing protein [Pseudomonas nitroreducens] >OWP47782.1 cupin [Pseudomonas nitroreducens]) HSP 1 Score: 225.7 bits (574), Expect = 2.600e-55 Identity = 115/240 (47.92%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPR---DAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 DS W +R+GPF E+ F P ER WT+LVQ VD+ +PEVA+LL+ F+FLP+WR+DD+MISYA GG+GPH DNYDVFLLQ HG RRW + + D S +LP++ +R+L +EE WVL PGDMLYLPPRV H G++ D DCMTYS+GFRAP+ AE+L + YSD +A + D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 65 DSPWELRRGPFQEDTFSQMP---ERDWTLLVQAVDQFIPEVAELLEHFKFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGRRRWKVGQT----CDASSPMLPHADLRILAEFEECADWVLEPGDMLYLPPRVAHYGIAED-DCMTYSVGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMAAMKGDSDQHQIQRDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 289
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_084311103.1 (cupin domain-containing protein [Pseudomonas jinjuensis] >SDO43267.1 50S ribosomal protein L16 3-hydroxylase [Pseudomonas jinjuensis]) HSP 1 Score: 225.3 bits (573), Expect = 3.400e-55 Identity = 118/239 (49.37%), Postives = 155/239 (64.85%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAG--EITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 DS W +R+GPF EEDF+ P E WT+LVQ VD+ +PEVA+LL+ FRFLP+WR+DDIMISYA GG+GPH DNYDVFLLQ HG RRW I + D S LL + +R+L +E+ WVL PGDMLYLPPR+ H+GV+ D DCMTYSIGFRAP+ AE+L + YSD ++ +D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 65 DSPWELRRGPFKEEDFKKLP---ENDWTLLVQAVDQFIPEVAELLEHFRFLPSWRIDDIMISYAAPGGGVGPHFDNYDVFLLQGHGRRRWKIGQT----CDADSPLLNHPDLRILAQFEQTDEWVLEPGDMLYLPPRIAHDGVAED-DCMTYSIGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMSAIKDGDPHKIQRDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 288
BLAST of NO06G01170 vs. NCBI_GenBank
Match: PJI46014.1 (cupin [Pseudomonas sp.]) HSP 1 Score: 224.6 bits (571), Expect = 5.800e-55 Identity = 114/240 (47.50%), Postives = 154/240 (64.17%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPR---DAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 DS W +R+GPF E+ F P ER WT+LVQ VD+ +PEVA+LL+ F+FLP+WR+DD+MISYA GG+GPH DNYDVFLLQ HG R W + + D S +LP++ +R+L +EE WVL PGDMLYLPPRV H G++ D DCMTYS+GFRAP+ AE+L + YSD +A + D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 65 DSPWELRRGPFQEDTFSQMP---ERDWTLLVQAVDQFIPEVAELLEHFKFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGHRHWKVGQT----CDASSPMLPHADLRILAEFEESADWVLEPGDMLYLPPRVAHYGIAED-DCMTYSVGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMAAMKGDFDQHQIQRDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 289 The following BLAST results are available for this feature:
BLAST of NO06G01170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01170 ID=NO06G01170|Name=NO06G01170|organism=Nannochloropsis oceanica|type=gene|length=1973bpback to top protein sequence of NO06G01170.1 >NO06G01170.1-protein ID=NO06G01170.1-protein|Name=NO06G01170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=412bpback to top Synonyms
Publications
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