NO06G00960, NO06G00960 (gene) Nannochloropsis oceanica

Overview
NameNO06G00960
Unique NameNO06G00960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2249
Alignment locationchr6:318015..320263 -

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Properties
Property NameValue
DescriptionSumo ligase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:318015..320263 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR023321PINIT
IPR004181Znf_MIZ
IPR001965Znf_PHD
Homology
BLAST of NO06G00960 vs. NCBI_GenBank
Match: EWM26145.1 (sumo ligase [Nannochloropsis gaditana])

HSP 1 Score: 454.1 bits (1167), Expect = 7.500e-124
Identity = 223/386 (57.77%), Postives = 285/386 (73.83%), Query Frame = 0
Query:    2 LGRTPTGFGAV-GGGVSKGSNVLIQCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSMQTQTEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSEPVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWKLFNSSKA 387
            LGR   G G        K +   +QCVCGQ     DEV C+EC+  FH+QCYG SMR+RNK + A CFLCLS +QNPF EV+ET+V P+R++ R+++E+    K+S Q Q ++  SR+ G +  G L +LVRCFPLNLLE  +P PG +    + K P+YPTHCWPLESQL VN   V IKQRQ YF G QRK KG SEPVD++   R+GINR+ L+HND  K FV++VQ+V+ V V++L ++V+ SPDTP+A ESLERI QSF+ CS+DSD E    MATVTRLSLRCPLG+T I+ PARG +C HLQCFDL TFLRYNERG+AAGW+CGVC+  LT+EGL+VDAFMR+IL +++ R++    E+LDSI+IN +GEW+LFNSS A
Sbjct:  165 LGRQQGGPGGPHSAPAGKLAGTFVQCVCGQAVTPWDEVKCAECHIAFHDQCYGTSMRARNKTFSAACFLCLSRRQNPFLEVVETLVPPSRVTSRARMETNFQFKLSHQQQRDMLASRQGGSRNEGSLQLLVRCFPLNLLETARPSPGHD----EGKLPFYPTHCWPLESQLRVNTECVPIKQRQTYFYGSQRKSKGHSEPVDVFLLARTGINRVGLMHNDEGKGFVIMVQIVKVVGVQRLLRKVVESPDTPTAEESLERIRQSFRGCSVDSDTEDGELMATVTRLSLRCPLGMTPIRIPARGTDCHHLQCFDLDTFLRYNERGAAAGWRCGVCNTVLTLEGLRVDAFMRNILAQIEARKE--MNEDLDSIEINHQGEWELFNSSAA 544          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: CBN74942.1 (similar to retinoic acid induced 17 [Ectocarpus siliculosus])

HSP 1 Score: 164.1 bits (414), Expect = 1.500e-36
Identity = 106/307 (34.53%), Postives = 158/307 (51.47%), Query Frame = 0
Query:   76 NPFYEVIETIVNPTRISRRSKVESTVAVKVSMQTQ----TEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSEPVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEW 379
            +PF EV  T+  P ++ R S  ++   +  ++         ++LS      +     +L+R +   L+       G E             H WPLES   VN     +KQR+V+F G  RK KG   P+DI   CR G NR+ L  +DPDKH VL+ + +R V         ++S     ++E  E+I +   A   DSD   +  MAT TRLSLRCPLGL  I  P RG+ C+HLQCFDL TFL +N+  + A WKCGVC+  +  E L VD ++ +++  L+E+   G  ++ + ++I+  G W
Sbjct:  124 DPFVEVSRTLAGPMKLERGSGSQNLAVLGFNLDANDHAAVRLSLSLGKSTDEGRKTHLLLRSY--QLISDSLEGAGAEAAKYSE-----GAHVWPLESVCQVNGGFQQLKQRKVFFQGQNRKLKGDCSPLDIGASCRPGENRVELYSSDPDKHAVLIQEALRRVKRSFKGCLDLNSHLEGDSSED-EQIGKG--AGGDDSD---DDLMATATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQ---GLTDDAEEVEIHQDGHW 414          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: XP_024571462.1 (sumo ligase [Plasmopara halstedii] >CEG35093.1 sumo ligase [Plasmopara halstedii])

HSP 1 Score: 151.4 bits (381), Expect = 1.000e-32
Identity = 106/361 (29.36%), Postives = 173/361 (47.92%), Query Frame = 0
Query:   25 QCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSMQTQTEVNL-----SRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSE-PVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWK 380
            +C C  +  +G  V C +C  + H +C+ +   S +      C +C S   +PFY+V +T+++P  + R +K  ST  ++  + T  ++N        + G    G L + +RCF +                   K      HCWP  +QL VN   V I QR     G     K   E P +I+ + R G N + +   +    F ++VQ+V    +  L   V  +    +   + E + +SF      S+ E +  +ATVT LS+RCPLGL  I  PARG  C+HLQCFDL TF+ + ++  +  W+C VCH  +    L++D +++ +L E++     GE E+L+ ++I   G WK
Sbjct:  171 RCFCATHGVSGKVVKCVDCGLMVHAKCHQLITLSSDWY----CEMCRSKTYDPFYQVQKTVLDPNFV-RFAKAASTFRLEYYI-TDNDLNTMYAKRDPKPGSMSPGSLELQLRCFAV-------------------KEDLATGHCWPASTQLNVNGFGVPITQRAP--PGHANPSKVLREIPANIFQYSRVGRNVIDIRTVENPSVFGIMVQIVEVRDINDLVNEVKEASKNVTYESAKEVVIKSF-----GSEDEDDV-VATVTMLSVRCPLGLCVIDLPARGIHCKHLQCFDLKTFILFCKKARSKAWRCTVCHQFIKASDLRIDPYLKKLLIEVQ-----GE-EDLEEVEIFPDGSWK 492          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: XP_009529970.1 (hypothetical protein PHYSODRAFT_351727 [Phytophthora sojae] >EGZ16221.1 hypothetical protein PHYSODRAFT_351727 [Phytophthora sojae])

HSP 1 Score: 149.4 bits (376), Expect = 3.900e-32
Identity = 104/357 (29.13%), Postives = 169/357 (47.34%), Query Frame = 0
Query:   25 QCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSM-QTQTEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSE-PVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWK 380
            +C C     +G  V C +C    H +C+ +   S  + Y   C +C S   +PFY V +T+++P  + R +K  S+  ++  +       N   + G    G L + +RCF +                   K      HCWP  +QL VN   V I QR     G     K   E P +I+ + R G N + +   +    F  +VQ+V    +  L   V  +    +   + + + +SF      S+ E +  +ATVT LS+RCPLGL+ I  PARG  C+HLQCFDL TF+ ++++  +  W+C VCH  +    L++D +++ +L E++     GE +EL+ ++I   G WK
Sbjct:  184 RCFCVMQGVSGKVVKCVDCGLAVHAKCHQLITLS-GEWY---CEMCRSKTYDPFYRVQKTVLDPNFV-RFAKTSSSFRLEYYITDNDLYANRDPKPGSMTPGNLELQLRCFAV-------------------KEDLAAGHCWPASTQLSVNGFGVPITQRAP--PGHANPSKVLRELPANIFQYSRVGRNVVDIRTTENPSVFGFMVQIVEVRDINDLVTEVKEASKNLTYEGAKQEVIKSF-----GSEDEDDV-VATVTILSVRCPLGLSVISLPARGLHCKHLQCFDLKTFMLFSKKARSKAWRCTVCHQFIKASDLRIDPYLKKLLAEVE-----GE-DELEEVEIFPDGSWK 502          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: OWZ15431.1 (SUMO ligase [Phytophthora megakarya])

HSP 1 Score: 148.3 bits (373), Expect = 8.800e-32
Identity = 102/360 (28.33%), Postives = 168/360 (46.67%), Query Frame = 0
Query:   25 QCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSMQTQ----TEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSE-PVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWK 380
            +C C     +G  V C++C    H +C+ +   S +      C +C +   +PFY V +T+++P  + R +K   +  ++  +  Q       N   + G    G L + +RCF L                   K      HCWP  +QL VN   V I QR     G     K   E P +++ + R G N + +   +    F  +VQ+V   ++  L   V  +    +   + + + +SF      S+ E +  +ATVT LS+RCPLGL  I  PARG  C+HLQCFDL TF+ Y+++  +  W+C VC   +    L++D +++ +L E++     GE +EL+ ++I   G WK
Sbjct:  160 RCFCAMQGVSGKVVKCADCGLAVHAKCHQLITMSGDWY----CEMCRAQTYDPFYRVQKTVLDPNFV-RFAKSACSFRLEYYITDQDLNSMFANRDPKPGSMTPGSLELQLRCFAL-------------------KEDLGAGHCWPASTQLTVNGFVVPITQRAP--PGHANPSKVLRELPANVFQYSRVGRNVVDIRTTENPSVFGFMVQIVEVRNINDLVDEVKEASKNLTYESAKQEVIKSF-----GSEDEDDV-VATVTMLSVRCPLGLCVINLPARGVHCKHLQCFDLKTFMLYSKKARSKAWRCTVCFQFIKASDLRIDPYLKKLLAEVE-----GE-DELEEVEIFPDGSWK 481          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: ETI53654.1 (hypothetical protein F443_03430 [Phytophthora parasitica P1569] >ETK93527.1 hypothetical protein L915_03305 [Phytophthora parasitica] >ETL46923.1 hypothetical protein L916_03272 [Phytophthora parasitica] >ETP23460.1 hypothetical protein F441_03416 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 145.6 bits (366), Expect = 5.700e-31
Identity = 102/360 (28.33%), Postives = 169/360 (46.94%), Query Frame = 0
Query:   25 QCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSMQ----TQTEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSE-PVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWK 380
            +C C     +G  + C +C    H +C+ +   S  + Y   C +C +   +PFY V +T+++P  + R +K  S+  ++  +          N   + G    G L + +RCF +                   K      HCWP  +QL VN   V I QR     G     K   E P +I+ + R G N + +   +    F  +VQ+V   ++  L   V  +    +   + + + +SF      S+ E +  +ATVT LS+RCPLGL  I  PARG  C+HLQCFDL TF+ ++++  +  W+C VCH  +    L++D +++ +L E++     GE +EL+ ++I   G WK
Sbjct:  175 RCFCVTQGVSGKVIKCVDCGLAVHAKCHQLITLS-GEWY---CEMCRAKTYDPFYRVQKTVLDPNFV-RFAKPASSFRLEYYITDNDLNNMYANRDPKPGSMTPGSLELQLRCFAV-------------------KEDLAAGHCWPASTQLSVNGFGVPITQRAP--PGHANPSKVLRELPANIFQYSRVGRNVVDIRTTENPSVFGFMVQIVEVRNINDLVNEVKEASKNLTYEGAKQEVIKSF-----GSEDEDDV-VATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMMFSKKARSKAWRCTVCHRFIKATDLRIDPYLKKLLAEVE-----GE-DELEEVEIFPDGSWK 496          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: ETL86648.1 (hypothetical protein L917_13951 [Phytophthora parasitica])

HSP 1 Score: 145.6 bits (366), Expect = 5.700e-31
Identity = 102/360 (28.33%), Postives = 169/360 (46.94%), Query Frame = 0
Query:   25 QCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSMQ----TQTEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSE-PVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWK 380
            +C C     +G  + C +C    H +C+ +   S  + Y   C +C +   +PFY V +T+++P  + R +K  S+  ++  +          N   + G    G L + +RCF +                   K      HCWP  +QL VN   V I QR     G     K   E P +I+ + R G N + +   +    F  +VQ+V   ++  L   V  +    +   + + + +SF      S+ E +  +ATVT LS+RCPLGL  I  PARG  C+HLQCFDL TF+ ++++  +  W+C VCH  +    L++D +++ +L E++     GE +EL+ ++I   G WK
Sbjct:  175 RCFCVTQGVSGKVIKCVDCGLAVHAKCHQLITLS-GEWY---CEMCRAKTYDPFYRVQKTVLDPNFV-RFAKPASSFRLEYYITDNDLNNMYANRDPKPGSMTPGSLELQLRCFAV-------------------KEDLAAGHCWPASTQLSVNGFGVPITQRAP--PGHANPSKVLRELPANIFQYSRVGRNVVDIRTTENPSVFGFMVQIVEVRNINDLVNEVKEASKNLTYEGAKQEVIKSF-----GSEDEDDV-VATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMMFSKKARSKAWRCTVCHRFIKATDLRIDPYLKKLLAEVE-----GE-DELEEVEIFPDGSWK 496          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: ETM39816.1 (hypothetical protein L914_14074 [Phytophthora parasitica])

HSP 1 Score: 145.6 bits (366), Expect = 5.700e-31
Identity = 102/360 (28.33%), Postives = 169/360 (46.94%), Query Frame = 0
Query:   25 QCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSMQ----TQTEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSE-PVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWK 380
            +C C     +G  + C +C    H +C+ +   S  + Y   C +C +   +PFY V +T+++P  + R +K  S+  ++  +          N   + G    G L + +RCF +                   K      HCWP  +QL VN   V I QR     G     K   E P +I+ + R G N + +   +    F  +VQ+V   ++  L   V  +    +   + + + +SF      S+ E +  +ATVT LS+RCPLGL  I  PARG  C+HLQCFDL TF+ ++++  +  W+C VCH  +    L++D +++ +L E++     GE +EL+ ++I   G WK
Sbjct:  175 RCFCVTQGVSGKVIKCVDCGLAVHAKCHQLITLS-GEWY---CEMCRAKTYDPFYRVQKTVLDPNFV-RFAKPASSFRLEYYITDNDLNNMYANRDPKPGSMTPGSLELQLRCFAV-------------------KEDLAAGHCWPASTQLSVNGFGVPITQRAP--PGHANPSKVLRELPANIFQYSRVGRNVVDIRTTENPSVFGFMVQIVEVRNINDLVNEVKEASKNLTYEGAKQEVIKSF-----GSEDEDDV-VATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMMFSKKARSKAWRCTVCHRFIKATDLRIDPYLKKLLAEVE-----GE-DELEEVEIFPDGSWK 496          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: XP_008916257.1 (hypothetical protein PPTG_24616 [Phytophthora parasitica INRA-310] >ETM98455.1 hypothetical protein PPTG_24616 [Phytophthora parasitica INRA-310])

HSP 1 Score: 145.6 bits (366), Expect = 5.700e-31
Identity = 102/360 (28.33%), Postives = 169/360 (46.94%), Query Frame = 0
Query:   25 QCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSMQ----TQTEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSE-PVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWK 380
            +C C     +G  + C +C    H +C+ +   S  + Y   C +C +   +PFY V +T+++P  + R +K  S+  ++  +          N   + G    G L + +RCF +                   K      HCWP  +QL VN   V I QR     G     K   E P +I+ + R G N + +   +    F  +VQ+V   ++  L   V  +    +   + + + +SF      S+ E +  +ATVT LS+RCPLGL  I  PARG  C+HLQCFDL TF+ ++++  +  W+C VCH  +    L++D +++ +L E++     GE +EL+ ++I   G WK
Sbjct:  175 RCFCVTQGVSGKVIKCVDCGLAVHAKCHQLITLS-GEWY---CEICRAKTYDPFYRVQKTVLDPNFV-RFAKPASSFRLEYYITDNDLNNMYANRDPKPGSMTPGSLELQLRCFAV-------------------KEDLAAGHCWPASTQLSVNGFGVPITQRAP--PGHANPSKVLRELPANIFQYSRVGRNVVDIRTTENPSVFGFMVQIVEVRNINDLVNEVKEASKNLTYEGAKQEVIKSF-----GSEDEDDV-VATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMMFSKKARSKAWRCTVCHRFIKATDLRIDPYLKKLLAEVE-----GE-DELEEVEIFPDGSWK 496          
BLAST of NO06G00960 vs. NCBI_GenBank
Match: ETO82339.1 (hypothetical protein F444_03499 [Phytophthora parasitica P1976])

HSP 1 Score: 145.6 bits (366), Expect = 5.700e-31
Identity = 102/360 (28.33%), Postives = 169/360 (46.94%), Query Frame = 0
Query:   25 QCVCGQNARTGDEVVCSECNKVFHNQCYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVESTVAVKVSMQ----TQTEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQELIDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSE-PVDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDTPSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPARGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRDILEELKERRDGGEGEELDSIQINDKGEWK 380
            +C C     +G  + C +C    H +C+ +   S  + Y   C +C +   +PFY V +T+++P  + R +K  S+  ++  +          N   + G    G L + +RCF +                   K      HCWP  +QL VN   V I QR     G     K   E P +I+ + R G N + +   +    F  +VQ+V   ++  L   V  +    +   + + + +SF      S+ E +  +ATVT LS+RCPLGL  I  PARG  C+HLQCFDL TF+ ++++  +  W+C VCH  +    L++D +++ +L E++     GE +EL+ ++I   G WK
Sbjct:  175 RCFCVTQGVSGKVIKCVDCGLAVHAKCHQLITLS-GEWY---CEMCRAKTYDPFYRVQKTVLDPNFV-RFAKPASSFRLEYYITDNDLNNMYANRDPKPGSMTPGSLELQLRCFAV-------------------KEDLAAGHCWPASTQLSVNGFGVPITQRAP--PGHANPSKVLRELPANIFQYSRVGRNVVDIRTTENPSVFGFMVQIVEVRNINDLVNEVKEASKNLTYEGAKQEVIKSF-----GSEDEDDV-VATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMMFSKKARSKAWRCTVCHRFIKATDLRIDPYLKKLLAEVE-----GE-DELEEVEIFPDGSWK 496          
The following BLAST results are available for this feature:
BLAST of NO06G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26145.17.500e-12457.77sumo ligase [Nannochloropsis gaditana][more]
CBN74942.11.500e-3634.53similar to retinoic acid induced 17 [Ectocarpus si... [more]
XP_024571462.11.000e-3229.36sumo ligase [Plasmopara halstedii] >CEG35093.1 sum... [more]
XP_009529970.13.900e-3229.13hypothetical protein PHYSODRAFT_351727 [Phytophtho... [more]
OWZ15431.18.800e-3228.33SUMO ligase [Phytophthora megakarya][more]
ETI53654.15.700e-3128.33hypothetical protein F443_03430 [Phytophthora para... [more]
ETL86648.15.700e-3128.33hypothetical protein L917_13951 [Phytophthora para... [more]
ETM39816.15.700e-3128.33hypothetical protein L914_14074 [Phytophthora para... [more]
XP_008916257.15.700e-3128.33hypothetical protein PPTG_24616 [Phytophthora para... [more]
ETO82339.15.700e-3128.33hypothetical protein F444_03499 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000354NSK000354Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00960.1NO06G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100014g29gene4392Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00960.1NO06G00960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00960 ID=NO06G00960|Name=NO06G00960|organism=Nannochloropsis oceanica|type=gene|length=2249bp
ATGCTGGGTCGGACCCCAACAGGGTTTGGTGCTGTTGGTGGAGGAGTATC
AAAAGGATCGAATGTGCTGATTCAGTGCGTGTGCGGGCAGAATGCAAGGA
CTGGGGATGAGGTGGTGTGTTCGGAGTGTAATAAAGTCTTCCACAACCAA
TGTTATGGCATCTCCATGCGATCCCGTAACAAGCTCTACCCCGCCCGGTG
CTTCCTCTGCCTCTCCTTAAAGCAAAATCCTTTCTACGAAGTAATCGAGA
CTATCGTCAACCCCACCCGCATCTCCAGGCGGTCCAAGGTCGAATCCACG
GTGGCCGTCAAAGTCAGCATGCAAACCCAAACCGAGGTCAACCTCTCTCG
CCGCGCCGGCCCCCAAAAAGCAGGCATCCTCTCCATCCTCGTCCGCTGCT
TTCCCCTCAACCTCTTGGAAATGGTCAAGCCGAAGCCCGGGCAAGAGCTC
ATAGACCAGCAGCATAAACCTCCCTACTACCCCACTCATTGCTGGCCCCT
TGAGTCTCAGCTCTTGGTTAACAACTTGCCGGTAGCGATAAAGCAACGAC
AGGTCTATTTCTGTGGTGTGCAACGGAAATGGAAGGGGCAGTCCGAGCCC
GTGGACATCTACAATTTCTGTCGCTCGGGAATTAATCGTCTTACCCTTGT
CCACAACGACCCCGACAAGCACTTCGTCCTCCTCGTTCAGGTTGTTCGAT
CTGTCTCAGTCGAGCAGCTGCAGCAGCGCGTGATCTCCTCCCCTGATACT
CCCAGTGCGGCTGAAAGTCTTGAGAGAATCTGCCAGTCTTTCAAGGCATG
CTCGATCGATTCAGATGGTGAGGGTGAGACGCCCATGGCCACGGTGACGC
GGCTTTCTCTCCGTTGTCCGCTGGGCCTGACGCATATCCAAACCCCGGCC
CGAGGGAAGGAGTGTCAGCACTTGCAGTGTTTTGATTTGGGGACTTTCTT
GAGATATAATGAACGGGGTTCAGCGGCGGGATGGAAGTGTGGGGTATGTC
ACGCAGGGTTAACCGTGGAGGGGTTGCAGGTCGATGCATTTATGAGGGAC
ATTCTTGAGGAGCTGAAGGAGCGGAGGGATGGGGGGGAGGGGGAGGAGTT
GGACTCGATTCAAATAAATGATAAAGGGGAATGGAAGCTGTTTAATTCGA
GTAAGGCCGCAGAGGAACGCGCAAACAACCGAAAGAGGAAGGCGGAGGTT
GCAACGGAGGCTGAGGGGGGGGGAGAAAGAGGAGGAGGACGAGGAGAAGA
AGGGAGAAGAGGGGGAGGAGGAGGAGGGGCGGTGAGTGTGGATGTTGATG
ATGATGGTGTGGCAGTCTTGACAGAGGCGGGTTCGAGGAGGTCTTCGGCG
GGAGGGGGAGAGGGTGGAAGTGGAAGTGGGGGCCAGCAGCAGAACGAGGG
GGAGGGAGGGTGGGAAGGACAAAGAGGAGGGGAAGGAAGGGGAGGAGGAG
GGCGGCCAGTGGGGGCGTCGGTTGCGATTGACCTTACTGTGAGCAGTGAC
GAGGAGCCTGAGGACAACGGAAAGGGAAACATGGACGAGGAAGAGGACGA
GGAAGGGTTGGTGAAGAGTAGCCGAAAGCGCCGCGGGCGGTTTATCGAAG
ACGACGAGTCAGAGGATGAGGACGAGAACGAGGCTGAGGGACGGGGTGAG
AAGCACCACGCGGGCACCGTCGAAGGGATGCGACATCATCCCGCCATTTG
TGCTGCTGCTACCACCACTGCCCTTGGGAATGCTGATTCTGCGACCGCCC
GGCGCCTTCCCCTCGCACCCGCTTCCGCGCTCGCATCAGTCCCTGCACCC
TTTGCGGCTCCTACGGCCGAGCCGGCAGAGCCAACAGCGCCTGCATCCAT
CCATACCCATGCCGCAGCGTTATCCCCTACTCCCTCAGCAGCAGGAACAG
GAACAGCAATACTCCCCAGGTCTGTGCAAGCAGTAGCACCAGCAGCACAA
GCAGCAGCAGTGGCGATATCAGAGCCCGCAGGCTCTGGAGGAGAGGCGCT
GTCGATGTCAAATGAACTAACTCTTCCCAATGACATAAATGACCTGTGGG
CATGAATGAGGGAAGAAAGCGGAGAAGGAGGAGACTTCCAAGTGAAAATT
GTTCGTCCCACGGACGTATTGACAAGTGGGCAGAGGGGGGGAAAGGGAGC
AAAGAGAATAGAAGAATGTACATAAACACAAGTAGTAGTAGCAGAGGGGG
GGAAAGGGAGCAAAGAGAATAGAAGAATGTACATAAACACAAGTAGTAG
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protein sequence of NO06G00960.1

>NO06G00960.1-protein ID=NO06G00960.1-protein|Name=NO06G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=685bp
MLGRTPTGFGAVGGGVSKGSNVLIQCVCGQNARTGDEVVCSECNKVFHNQ
CYGISMRSRNKLYPARCFLCLSLKQNPFYEVIETIVNPTRISRRSKVEST
VAVKVSMQTQTEVNLSRRAGPQKAGILSILVRCFPLNLLEMVKPKPGQEL
IDQQHKPPYYPTHCWPLESQLLVNNLPVAIKQRQVYFCGVQRKWKGQSEP
VDIYNFCRSGINRLTLVHNDPDKHFVLLVQVVRSVSVEQLQQRVISSPDT
PSAAESLERICQSFKACSIDSDGEGETPMATVTRLSLRCPLGLTHIQTPA
RGKECQHLQCFDLGTFLRYNERGSAAGWKCGVCHAGLTVEGLQVDAFMRD
ILEELKERRDGGEGEELDSIQINDKGEWKLFNSSKAAEERANNRKRKAEV
ATEAEGGGERGGGRGEEGRRGGGGGGAVSVDVDDDGVAVLTEAGSRRSSA
GGGEGGSGSGGQQQNEGEGGWEGQRGGEGRGGGGRPVGASVAIDLTVSSD
EEPEDNGKGNMDEEEDEEGLVKSSRKRRGRFIEDDESEDEDENEAEGRGE
KHHAGTVEGMRHHPAICAAATTTALGNADSATARRLPLAPASALASVPAP
FAAPTAEPAEPTAPASIHTHAAALSPTPSAAGTGTAILPRSVQAVAPAAQ
AAAVAISEPAGSGGEALSMSNELTLPNDINDLWA*
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Synonyms
Publications