NO06G00940, NO06G00940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00940 vs. NCBI_GenBank
Match: XP_005707552.1 (peroxisomal membrane MPV17/PMP22-like protein [Galdieria sulphuraria] >EME31032.1 peroxisomal membrane MPV17/PMP22-like protein [Galdieria sulphuraria]) HSP 1 Score: 212.6 bits (540), Expect = 1.100e-51 Identity = 100/180 (55.56%), Postives = 126/180 (70.00%), Query Frame = 0 Query: 6 WTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDAPEVVK 186 W +YN LE+ PLL K++TSL GF LGDILAQKF+ D + R R+ FGFL+HGPTGH FY+ LDK IPGT VA KVAIDQ+LW P F ++FF +L + E +SF +AK++ D TA+ SW VW AH +NFRF+PS QRLLYIN++QI YN+FLS +GNK+ P V K Sbjct: 111 WMRYNQLLESRPLLTKSLTSLIGFILGDILAQKFLSSDGI-LHLDRLLRMALFGFLIHGPTGHIFYTQLDKAIPGTEAWKVACKVAIDQVLWAPIFALIFFGFLAVLERQSFKQFEAKLRQDWKTAIFASWKVWPLAHAINFRFIPSHQRLLYINAVQIFYNVFLSIIGNKRTQIPRVSK 289
BLAST of NO06G00940 vs. NCBI_GenBank
Match: CBJ27540.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 210.7 bits (535), Expect = 4.200e-51 Identity = 98/175 (56.00%), Postives = 128/175 (73.14%), Query Frame = 0 Query: 3 GRLWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKK 178 G +W Y + L + PLL K++TS+TGF LGD+LAQKF+ E+ D+ R +L SFG L+HG +GH+FY++LD +IPGTA TVA KV IDQ+LWNP FG MFF Y+G +G + I KIKN+L T+V GSWTVW AH +NFR +P+SQRLLYIN+IQI YN FLS + ++ Sbjct: 124 GVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEE-IDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRMIPTSQRLLYINTIQIFYNCFLSVIAQRE 297
BLAST of NO06G00940 vs. NCBI_GenBank
Match: XP_005776476.1 (putative peroxisomal membrane protein [Emiliania huxleyi CCMP1516] >EOD24047.1 putative peroxisomal membrane protein [Emiliania huxleyi CCMP1516]) HSP 1 Score: 204.1 bits (518), Expect = 3.900e-49 Identity = 97/179 (54.19%), Postives = 119/179 (66.48%), Query Frame = 0 Query: 2 FGRLWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDA 181 F W KYN L+ PLL+KA TS GF +GDILAQ F+ ++ +D R RL SFGFLVHG + H+FY LD IPG + V TKV IDQ+LWNP G+MFFSY+ E K + K +N+L V GSW VW AH +NFRF+PSSQR+LYINSIQIGYN FLS + N+ +A Sbjct: 96 FASAWKKYNELLDEKPLLMKAFTSFLGFAIGDILAQIFI--QKQDFDWYRLFRLASFGFLVHGTSSHWFYGMLDSAIPGKGAQPVFTKVFIDQVLWNPILGIMFFSYVACLEWKGLQYVIDKTRNELLRQVTGSWKVWPLAHAINFRFIPSSQRVLYINSIQIGYNCFLSLISNRDAEA 272
BLAST of NO06G00940 vs. NCBI_GenBank
Match: EWM28728.1 (Mpv17/PMP22 [Nannochloropsis gaditana]) HSP 1 Score: 202.2 bits (513), Expect = 1.500e-48 Identity = 94/175 (53.71%), Postives = 117/175 (66.86%), Query Frame = 0 Query: 3 GRLWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKK 178 G LW KYN L+TNPL KA+TSL GFT+GD+LAQ F+ DV R RL SFG VHGP GH+FY LD++ P +TVA KV IDQ+LW P F V+FF+++ + +G I+ KI DL V SW VW H +NFRF+P QRLLYIN+IQIGYN+FLS L ++K Sbjct: 79 GLLWDKYNEVLDTNPLPTKAVTSLVGFTIGDLLAQSFLGEKGAPLDVKRLLRLASFGLAVHGPVGHFFYGALDEKFPKKDAQTVAIKVLIDQVLWAPVFTVIFFAWIEVLQGAGLQKIKQKINQDLVRGVTASWKVWPLVHVINFRFIPPQQRLLYINTIQIGYNVFLSMLASRK 253
BLAST of NO06G00940 vs. NCBI_GenBank
Match: CBN79193.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 200.3 bits (508), Expect = 5.700e-48 Identity = 92/174 (52.87%), Postives = 122/174 (70.11%), Query Frame = 0 Query: 3 GRLWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNK 177 G W YN+AL P+L+KA TS GF++GD LAQK ++ + R AR+ +FGFL HG H+FY+ LD +PGTA TV KV IDQ+ W P F ++FF+++G+ G S ++I AK+K+DL VVGSWTVW AH +NF+FVP+ QRLLYINSIQI YN+FLS +G+K Sbjct: 124 GGAWDAYNSALADKPILVKACTSFVGFSIGDFLAQKGT--SKESFSYARLARMAAFGFLFHGTISHFFYNALDSALPGTAAMTVIQKVIIDQVFWAPIFTLIFFTWIGVTSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 295
BLAST of NO06G00940 vs. NCBI_GenBank
Match: OEU19890.1 (hypothetical protein FRACYDRAFT_206674 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 195.3 bits (495), Expect = 1.800e-46 Identity = 89/171 (52.05%), Postives = 115/171 (67.25%), Query Frame = 0 Query: 6 WTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNK 177 W YN AL+T+PL KA TSL G+ LGD+LAQ F+ +DV R L +FG L HGP+GHYFY+WLD +IPG +VA K+ IDQ LW P F +FF+YLGL G SF I KIK DL A GSW VW HF+NF+F+ S R+L++N +Q+ +N+FLS +G+K Sbjct: 65 WASYNKALDTSPLTAKACTSLVGWALGDVLAQIFISGGP--FDVKRFVTLSAFGLLYHGPSGHYFYNWLDDKIPGKDGLSVAKKILIDQTLWCPLFMTVFFTYLGLVSGDSFGTIGTKIKTDLFAACQGSWKVWPVVHFINFKFISSKHRILFLNVVQVAFNMFLSLIGSK 233
BLAST of NO06G00940 vs. NCBI_GenBank
Match: GAX16827.1 (peroxisomal membrane protein 2 [Fistulifera solaris]) HSP 1 Score: 194.5 bits (493), Expect = 3.100e-46 Identity = 90/171 (52.63%), Postives = 117/171 (68.42%), Query Frame = 0 Query: 6 WTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNK 177 W YN AL+ PL+ KAMTSL G+ LGD+LAQ F+ +D+ R L FGF+ HGP+GH+FY+WLDKQI G + VA KV IDQL+W P F +FF+YLGL G S I K+KNDL TA GSW VW H VNF+F+ + RL++IN++QI +N+FLS +G+K Sbjct: 62 WAAYNEALDKKPLITKAMTSLVGWALGDLLAQIFISGGP--FDMKRFITLSVFGFIYHGPSGHFFYNWLDKQIEGKEAQHVALKVGIDQLIWCPIFMTVFFTYLGLVNGDSVAVIVDKVKNDLFTACQGSWKVWPIVHAVNFKFISTKHRLVFINAVQIAFNMFLSIIGSK 230
BLAST of NO06G00940 vs. NCBI_GenBank
Match: OSX77133.1 (hypothetical protein BU14_0161s0053 [Porphyra umbilicalis]) HSP 1 Score: 193.4 bits (490), Expect = 7.000e-46 Identity = 98/168 (58.33%), Postives = 115/168 (68.45%), Query Frame = 0 Query: 9 YNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNK 177 Y L P+L KA+TS GF +GDILAQ F+ D +D R AR+ SFGF++HG TGH +Y LD+ +PGT VA KVA DQLLW P F M+FSYLGLAEG+S IQAKI+ND V SW VW H V+FRFVP+ R+LYINSIQI YNIFLS LGNK Sbjct: 34 YEMWLGKKPILTKALTSAVGFAIGDILAQCFLGGD-AAFDWARFARVASFGFVLHGTTGHVWYGKLDQLLPGTEAWKVAVKVAADQLLWAPIFTAMYFSYLGLAEGRSMDYIQAKIQNDTMAGVTASWKVWPIVHAVSFRFVPTELRILYINSIQIFYNIFLSVLGNK 200
BLAST of NO06G00940 vs. NCBI_GenBank
Match: OSX77134.1 (hypothetical protein BU14_0161s0053 [Porphyra umbilicalis]) HSP 1 Score: 193.4 bits (490), Expect = 7.000e-46 Identity = 98/168 (58.33%), Postives = 115/168 (68.45%), Query Frame = 0 Query: 9 YNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNK 177 Y L P+L KA+TS GF +GDILAQ F+ D +D R AR+ SFGF++HG TGH +Y LD+ +PGT VA KVA DQLLW P F M+FSYLGLAEG+S IQAKI+ND V SW VW H V+FRFVP+ R+LYINSIQI YNIFLS LGNK Sbjct: 33 YEMWLGKKPILTKALTSAVGFAIGDILAQCFLGGD-AAFDWARFARVASFGFVLHGTTGHVWYGKLDQLLPGTEAWKVAVKVAADQLLWAPIFTAMYFSYLGLAEGRSMDYIQAKIQNDTMAGVTASWKVWPIVHAVSFRFVPTELRILYINSIQIFYNIFLSVLGNK 199
BLAST of NO06G00940 vs. NCBI_GenBank
Match: EJK54998.1 (hypothetical protein THAOC_25323 [Thalassiosira oceanica]) HSP 1 Score: 193.0 bits (489), Expect = 9.100e-46 Identity = 92/168 (54.76%), Postives = 115/168 (68.45%), Query Frame = 0 Query: 9 YNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNK 177 Y+ AL+ NP+ +KA+TSL G+ LGD+LAQ F+ D R A L FGF+ HGP+GHYFY+WLD +IPGT V TKVAIDQL W P F +FF+YLG+ G S I KIKNDL TA GSW VW H +NFRFV + R+ YIN++QI +N+FLS LG+K Sbjct: 71 YSEALDKNPITMKALTSLVGWFLGDLLAQLFIAGGP--VDYKRLATLSFFGFIYHGPSGHYFYNWLDSKIPGTDAAPVFTKVAIDQLFWCPIFMSVFFTYLGVVNGDSLATIGNKIKNDLLTACQGSWKVWPIVHLINFRFVSNKWRIPYINAVQIAFNMFLSLLGSK 236 The following BLAST results are available for this feature:
BLAST of NO06G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00940 ID=NO06G00940|Name=NO06G00940|organism=Nannochloropsis oceanica|type=gene|length=1912bpback to top protein sequence of NO06G00940.1 >NO06G00940.1-protein ID=NO06G00940.1-protein|Name=NO06G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=200bpback to top Synonyms
Publications
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