NO06G00930, NO06G00930 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G00930
Unique Name	NO06G00930
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3400
Alignment location	chr6:307843..311242 +

Link to JBrowse

Properties


Property Name	Value
Description	casein kinase II, alpha chain 2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:307843..311242 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding
GO:0016301	kinase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom
IPR000719	Prot_kinase_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

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BLAST of NO06G00930 vs. NCBI_GenBank
Match: EWM26141.1 (Protein kinase, ATP binding site [Nannochloropsis gaditana])

HSP 1 Score: 1243.0 bits (3215), Expect = 0.000e+0
Identity = 630/920 (68.48%), Postives = 722/920 (78.48%), Query Frame = 0

Query:   34 MQYHALSLAQEDPAMDVSLVGYRGERCIPAVEKHPNIHVYYVDPFASEALRKKSFLVFAAIKIIALLFQLFELLLIKLPTRPEMLLVQNPPSIPTLFVAWAVAKLRGAILVIDWHNLGFSILAHT--RGDNHPLVTLAQLYERYFGGLADKHLCVTEAMRLWLLNNFGIQAKVLHDRPPSFFGPTSVADRHQIFLRLEPQLRAWQVEERYSAATGVVVGEGETLFTTRRGNGSSS-----------SDVALREAQRPALIVSSTSWTEDEDFNLLLEALQTVDAQWAAAAISSSYSSAGEKEIGSVKPFIVVVVTGKGPLKAEYEARMRVLPFQRIAVCTMWLEAEDYPRLVGCADLGVSLHTSTSGIDLPMKVLDMFGCQVPVCALGFSSLSELVRHGENGLVFRTAADLAAYLEELLGRFPMEKQELDVLRAGVAGMARWKENWQKHAAPYLLNGDVGVKKGEQKSKGRRWRCL--SWM-LVLVVIYLLV---FEGTLPAIVHSSSS--------------------------------SRTSLTTSSGIS--------RSCPPSPPFCFLRSS-CRDFRDKGMSGTGVGTSGSRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRANA 894
            MQYHALSLA+E+P + VSLVGYRGE+CIPAV+ +P I + YVDPFASEALRK SFL+FAA K+IAL+ QL +LLL +L T P ++LVQNPPSIPTLF+ W VA+LRG++ VIDWHN GFSILAH   R   HP+V +A+ YE  FG +ADKHLCVT  MR WL +NFG+QA VLHDRPPSFFGPTS+A +H++F+R+  QLR W+VEE+Y+AATG+VVGEGETLFTT  G+   S           +D+ LR+  RPAL+VSSTSWTEDEDF +LL AL+ +DA+WA     +   S G +   + KPF+VVVVTGKGPLKA YEA +R  P QR+A+CTMWLEAEDYP+L+G ADLGVSLHTSTSG+DLPMKVLDMFGCQVPVCA+GF SLSELVR   NG VF+TA +LA  L+ LLGRFPM+  +LD LRAGV GM RW+ +W++HAA YL   +V           + W C+  +W  L+L  ++  +        P+I+  ++S                                +  +L  SSG++         S     P  FLR++ C       MSGTG GTSGSRAR Y +VNVQRPR+YWDYEGLTVTWGDQE+YEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTL+DMDIR+YM ELLKALEYCHSNGIMHRDVKPHNVMI+HERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCM AGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLF YL+KYDLELDPQFDGILGRHSKK W KFVTPENRALVSDEA+DF+G+LLRYDHQERLTAQEAMAHPYFAPVRA+A
Sbjct:    1 MQYHALSLAKENPTIQVSLVGYRGEQCIPAVKNNPRIQLCYVDPFASEALRKASFLIFAAAKVIALILQLIKLLLFELKTPPALILVQNPPSIPTLFIGWLVARLRGSMFVIDWHNFGFSILAHAPERTRRHPMVRIARYYEHLFGRMADKHLCVTNGMRKWLNDNFGVQAHVLHDRPPSFFGPTSLAGQHELFMRIRRQLRHWKVEEKYTAATGIVVGEGETLFTTLIGSAQKSTRVNNAGSRLKTDIVLRDINRPALLVSSTSWTEDEDFRVLLAALRDLDAKWAV----NPSPSTGTRGSNASKPFVVVVVTGKGPLKAHYEALIRAHPLQRVAICTMWLEAEDYPKLIGSADLGVSLHTSTSGVDLPMKVLDMFGCQVPVCAMGFPSLSELVRDNVNGFVFQTATELAVCLDTLLGRFPMDTSKLDQLRAGVKGMERWEGHWRRHAASYLAIKEV----------TKSW-CVFGAWFGLLLAFVFAAITVKLSSVRPSIIDPTTSCPGLHRGSYGLAPSSIIGRPSDLWRIPLFCVAATGTLFFSSGVTSLAATLWPTSSTSFLPLYFLRNNPCSAL--PPMSGTGEGTSGSRARVYANVNVQRPRDYWDYEGLTVTWGDQEDYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLSDMDIRYYMLELLKALEYCHSNGIMHRDVKPHNVMINHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMLAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFAYLEKYDLELDPQFDGILGRHSKKPWQKFVTPENRALVSDEAIDFIGQLLRYDHQERLTAQEAMAHPYFAPVRASA 903

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BLAST of NO06G00930 vs. NCBI_GenBank
Match: OEU09405.1 (Pkinase-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 610.5 bits (1573), Expect = 8.200e-171
Identity = 280/331 (84.59%), Postives = 308/331 (93.05%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRANAAGGGEE 900
            SRAR Y DVNV RPR+YWDYE LTV WGDQEEYEV+RKIGRGKYSEVFEG+N  N T+CV+KILKPVKKKKIKREIKILQN+CGGTNII+LLDVVRDPQSKTPSLIFE+++NTDFK+LYPTLTD DIR+Y+ ELLKAL+YCHSNG+MHRDVKPHNVMIDHE+RQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGM+FRKEPFFHGH+NYDQLVKIAKVLGT++LF YLD YDLELDP FDGILGRHSKK+W KFVTPEN+ LVSDEA+D++ KLLRYDHQERL+A+EAMAH YFAPVR  A  GG +
Sbjct:    2 SRARVYADVNVHRPRDYWDYEALTVNWGDQEEYEVIRKIGRGKYSEVFEGINVVNSTKCVIKILKPVKKKKIKREIKILQNMCGGTNIIQLLDVVRDPQSKTPSLIFEHVNNTDFKILYPTLTDYDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKSWQKFVTPENQHLVSDEAIDYVSKLLRYDHQERLSAKEAMAHAYFAPVREAAMRGGNQ 332

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BLAST of NO06G00930 vs. NCBI_GenBank
Match: XP_002177936.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50750.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 609.8 bits (1571), Expect = 1.400e-170
Identity = 284/339 (83.78%), Postives = 308/339 (90.86%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAP-----VRANAAGGGEEGLR 903
            SRAR Y DVNV RPR+YWDYE LTV WGDQEEYEV+RKIGRGKYSEVFEG+N  N T+CVVKILKPVKKKKIKREIKILQN+CGGTNII+LLDVVRDPQSKTPSLIFE+++NTDFK+LYPTL+D DIRFY++ELLKAL+YCHSNG+MHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGM+FRKEPFFHGH+NYDQLVKI KVLGT++LF YLD YDLELDP FDGILGRHSKK W KFVTPEN+ LVSDEA+DF+ KLLRYDHQERL+AQEAM H YFAP     VR NA G G  G +
Sbjct:    2 SRARVYADVNVHRPRDYWDYEALTVNWGDQEEYEVIRKIGRGKYSEVFEGMNVVNNTKCVVKILKPVKKKKIKREIKILQNMCGGTNIIQLLDVVRDPQSKTPSLIFEHVNNTDFKILYPTLSDYDIRFYIYELLKALDYCHSNGVMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIGKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTPENQHLVSDEAIDFVSKLLRYDHQERLSAQEAMTHAYFAPVREAAVRENARGAGTAGFQ 340

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BLAST of NO06G00930 vs. NCBI_GenBank
Match: GAX25427.1 (casein kinase II subunit alpha [Fistulifera solaris])

HSP 1 Score: 608.2 bits (1567), Expect = 4.100e-170
Identity = 280/326 (85.89%), Postives = 305/326 (93.56%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRANAA 895
            SRAR Y DVNV RPREYWDYE LTV WGDQEEYEV+RKIGRGKYSEVFEGVN  N T+CV+KILKPVKKKKIKREIKILQN+CGGTNII+LLDVVRDPQSKTPSLIFE+++NTDFK+LYPTL+D DIR+Y+ ELLKAL+YCHSNG+MHRDVKPHNVMIDHE+RQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGM+FRKEPFFHGH+NYDQLVKIAKVLGT++LF YLD YDLELDP FDGILGRHSKK W KF+TPEN+ LVSDEA+DF+ KLLRYDHQERL+A+EAMAH YFAPVR  AA
Sbjct:    2 SRARVYPDVNVHRPREYWDYEALTVNWGDQEEYEVIRKIGRGKYSEVFEGVNVVNNTKCVIKILKPVKKKKIKREIKILQNMCGGTNIIQLLDVVRDPQSKTPSLIFEHVNNTDFKILYPTLSDFDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFITPENQHLVSDEAIDFVSKLLRYDHQERLSAKEAMAHMYFAPVREAAA 327

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BLAST of NO06G00930 vs. NCBI_GenBank
Match: GAX20956.1 (casein kinase II subunit alpha [Fistulifera solaris])

HSP 1 Score: 606.7 bits (1563), Expect = 1.200e-169
Identity = 279/326 (85.58%), Postives = 304/326 (93.25%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRANAA 895
            SRAR Y DVNV RPREYWDYE LTV WGDQEEYEV+RKIGRGKYSEVFEGVN  N T+CV+KILKPVKKKKIKREIKILQN+CGGTNII+LLDVVRDPQSKTPSLIFE+++NTDFK+LYPTL+D DIR+Y+ ELLKAL+YCHSNG+MHRDVKPHNVMIDHE+RQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGM+FRKEPFFHGH+NYDQLVKIAKVLGT++LF YLD YDLELDP FDGILGRHSKK W KF+TPEN+ LVSDEA+DF+ KLLRYDHQERL+A+EAM H YFAPVR  AA
Sbjct:    2 SRARVYPDVNVHRPREYWDYEALTVNWGDQEEYEVIRKIGRGKYSEVFEGVNVVNNTKCVIKILKPVKKKKIKREIKILQNMCGGTNIIQLLDVVRDPQSKTPSLIFEHVNNTDFKILYPTLSDFDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFITPENQHLVSDEAIDFVSKLLRYDHQERLSAKEAMGHMYFAPVREAAA 327

[Close]

BLAST of NO06G00930 vs. NCBI_GenBank
Match: EJK69095.1 (hypothetical protein THAOC_09683, partial [Thalassiosira oceanica])

HSP 1 Score: 599.4 bits (1544), Expect = 1.900e-167
Identity = 273/326 (83.74%), Postives = 305/326 (93.56%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRANAA 895
            SRAR Y DVNV RPR+YWDYE LTV WGDQE+YEV+RKIGRGKYSEVFEGVN +N ++CV+KILKPVKKKKIKREIKILQN+CGGTNII+LLDVVRDPQSKTPSLIFE+++NTDFK+LYPTL+D DIR+Y+ ELLKAL+YCHSNG+MHRDVKPHNVMIDHE+RQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDY+LDMWSLGCMFAGM+FRKEPFFHGH+NYDQLVKIAKVLGT++LF YLD YDLELDP FDGILGRHSKK W KFVT EN+ L+SDE++DF+ KLLRYDHQERL+A+EAM+HPYF PVR  AA
Sbjct:  117 SRARVYADVNVHRPRDYWDYEALTVNWGDQEDYEVIRKIGRGKYSEVFEGVNVSNNSKCVIKILKPVKKKKIKREIKILQNMCGGTNIIQLLDVVRDPQSKTPSLIFEHVNNTDFKILYPTLSDYDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYALDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTNENQHLISDESIDFVSKLLRYDHQERLSAKEAMSHPYFEPVRQAAA 442

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BLAST of NO06G00930 vs. NCBI_GenBank
Match: XP_002287329.1 (hypothetical protein THAPSDRAFT_39539 [Thalassiosira pseudonana CCMP1335] >EED94772.1 hypothetical protein THAPSDRAFT_39539 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 599.4 bits (1544), Expect = 1.900e-167
Identity = 275/328 (83.84%), Postives = 305/328 (92.99%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRANAAGG 897
            SRAR Y DVNV RPR+YWDYE LTV WGDQE+YEVVRKIGRGKYSEVFEG N  N ++CV+KILKPVKKKKIKREIKILQN+CGGTNII+LLDVVRDPQSKTPSLIFE+++NTDFK+LYPTL+D DIR+Y+ ELLKAL+YCHSNG+MHRDVKPHNVMIDHE+RQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGM+FRKEPFFHGH+NYDQLVKIAKVLGT++LF YLD YDLELDP FDGILGRHSKK W KFVT +N+ L+S+EA+DF+ KLLRYDHQERL+A+EAM+HPYFAPVR  AA G
Sbjct:    2 SRARVYADVNVHRPRDYWDYEALTVNWGDQEDYEVVRKIGRGKYSEVFEGHNVGNNSKCVIKILKPVKKKKIKREIKILQNMCGGTNIIQLLDVVRDPQSKTPSLIFEHVNNTDFKILYPTLSDFDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTNDNQHLISEEAIDFVSKLLRYDHQERLSAKEAMSHPYFAPVREAAATG 329

[Close]

BLAST of NO06G00930 vs. NCBI_GenBank
Match: CBN75759.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 592.8 bits (1527), Expect = 1.800e-165
Identity = 273/324 (84.26%), Postives = 299/324 (92.28%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRAN 893
            SRAR Y DVNV RPREYWDYE L V WGDQE+YEVVRKIGRGKYSEVFEG+N  N T+CV+KILKPVKKKKIKREIKILQNLCGGTNII+LLDVVRDPQSKTPSL+FEYI+NTDFKVLYPTLTD DIR+Y+ ELLKAL+Y HSNGIMHRDVKPHNVMIDHE++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGM+FRKEPFFHGH+NYDQLVKIAKVLGTD+LF YLDKY+LELDP FDGI+GRHS + W KFV  EN+ LVS++A+ F+G+LLRYDHQERLTA++AM HPYF  VRAN
Sbjct:    2 SRARVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKREIKILQNLCGGTNIIQLLDVVRDPQSKTPSLVFEYINNTDFKVLYPTLTDYDIRYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNTENQHLVSEDAISFVGQLLRYDHQERLTAKDAMDHPYFQAVRAN 325

[Close]

BLAST of NO06G00930 vs. NCBI_GenBank
Match: GAQ81057.1 (casein kinase II subunit alpha [Klebsormidium nitens])

HSP 1 Score: 577.0 bits (1486), Expect = 1.000e-160
Identity = 259/326 (79.45%), Postives = 298/326 (91.41%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRANAA 895
            S+AR Y DVNVQRP+EYWDYE LTV WGDQ++YEVVRK+GRGKYSEVFEGVNA N  RC++KILKPVKKKKIKREIKILQNLCGG N+I+LLD+VRDPQSKTPSL+FE+++NTDFKVLYPTLTD DIR+Y++ELLKAL+YCHS GIMHRDVKPHNVMIDHE+R+LRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVD Q+YDYSLDMWSLGCMFAGM+FRKEPFF+GH+NYDQLVKIAKVLGTD+L+ YL+KY +ELDP  + ++GRHS+K W KF+  +N+ LVS EA+DF+ KLLRYDHQERLTA+EA  HPYF PVR N A
Sbjct:    2 SKARVYADVNVQRPKEYWDYEALTVQWGDQDDYEVVRKVGRGKYSEVFEGVNAINSERCIIKILKPVKKKKIKREIKILQNLCGGPNVIKLLDIVRDPQSKTPSLVFEFVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELYAYLNKYRIELDPHLEALVGRHSRKQWSKFINADNQHLVSPEAIDFLDKLLRYDHQERLTAKEAQQHPYFYPVRQNEA 327

[Close]

BLAST of NO06G00930 vs. NCBI_GenBank
Match: XP_024368922.1 (casein kinase II subunit alpha-2 [Physcomitrella patens] >XP_024368923.1 casein kinase II subunit alpha-2 [Physcomitrella patens] >XP_024368924.1 casein kinase II subunit alpha-2 [Physcomitrella patens] >PNR60228.1 hypothetical protein PHYPA_003021 [Physcomitrella patens])

HSP 1 Score: 574.7 bits (1480), Expect = 5.000e-160
Identity = 260/324 (80.25%), Postives = 298/324 (91.98%), Query Frame = 0

Query:  569 SRARAYTDVNVQRPREYWDYEGLTVTWGDQEEYEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNLCGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMHELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPENRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRAN 893
            S+AR YTDVNVQRP++YWDYE LTV WGDQ++YEVVRK+GRGKYSEVFEGVNA N  RCV+KILKPVKKKKIKREIKILQNLCGG NI++LLD+VRD QSKTPSLIFEY++NTDFKVLYPTLTD DIR+Y+HELLKAL+YCHS GIMHRDVKPHNVMIDHE+R+LRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVD Q+YDYSLDMWSLGCMFAGM+FRKEPFF+GH+NYDQLVKIAKVLGTD+L +YL+KY LELDP  + ++GRHS+K W KF+  +N+ LV  EA+DF+ KLLRYDHQ+RLTA+EAMAHPYF PV+ +
Sbjct:    2 SKARVYTDVNVQRPKDYWDYEALTVQWGDQDDYEVVRKVGRGKYSEVFEGVNAVNSERCVMKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLTDFDIRYYIHELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNSYLNKYRLELDPHLEALVGRHSRKPWSKFINADNQHLVVPEAVDFLDKLLRYDHQDRLTAKEAMAHPYFYPVKVS 325

The following BLAST results are available for this feature:

BLAST of NO06G00930 vs. NCBI_GenBank

BLAST of NO06G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26141.1	0.000e+0	68.48	Protein kinase, ATP binding site [Nannochloropsis ...	[more]
OEU09405.1	8.200e-171	84.59	Pkinase-domain-containing protein [Fragilariopsis ...	[more]
XP_002177936.1	1.400e-170	83.78	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
GAX25427.1	4.100e-170	85.89	casein kinase II subunit alpha [Fistulifera solari...	[more]
GAX20956.1	1.200e-169	85.58	casein kinase II subunit alpha [Fistulifera solari...	[more]
EJK69095.1	1.900e-167	83.74	hypothetical protein THAOC_09683, partial [Thalass...	[more]
XP_002287329.1	1.900e-167	83.84	hypothetical protein THAPSDRAFT_39539 [Thalassiosi...	[more]
CBN75759.1	1.800e-165	84.26	conserved unknown protein [Ectocarpus siliculosus]	[more]
GAQ81057.1	1.000e-160	79.45	casein kinase II subunit alpha [Klebsormidium nite...	[more]
XP_024368922.1	5.000e-160	80.25	casein kinase II subunit alpha-2 [Physcomitrella p...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL091	nonsL091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR147	ngnoR147	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000359	NSK000359	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO06G00930.1	NO06G00930.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
Naga_100014g34	gene4395	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO06G00930.1	NO06G00930.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO06G00930 ID=NO06G00930|Name=NO06G00930|organism=Nannochloropsis oceanica|type=gene|length=3400bp
ATGGAAGATATACCGTCTCATATGCCGTCTCCAGATGCGGAGCGTTGTCG
TCGCCACGTAGTGGTTTTGGTACTGGGTGACGTGGGACGGTCGCCGAGGA
TGCAATACCATGCCCTCAGCCTCGCCCAAGAAGACCCCGCCATGGACGTG
TCCTTGGTGGGCTACCGGGGCGAGCGCTGCATTCCCGCCGTGGAAAAGCA
TCCGAACATTCATGTGTACTACGTTGACCCCTTTGCCAGTGAAGCGCTGC
Ggtaagaagggaaattttgttgaggagcagagtaggagcattagactcat
ctcccttccccccccttacacagCAAGAAGAGTTTCCTCGTCTTTGCCGC
TATCAAAATCATCGCCCTACTTTTCCAGCTCTTTGAACTCCTTCTCATCA
AGCTGCCCACACGGCCCGAAATGCTCCTGGTCCAGAATCCCCCAAGCATC
CCAACCCTCTTTGTGGCGTGGGCCGTGGCCAAGCTGCGTGGGGCTATCCT
CGTCATCGACTGGCACAACCTCGGCTTCTCCATTCTCGCGCACACCCGAG
GCGACAACCACCCTTTAGTAACTCTTGCCCAATTATACGAGCGGTACTTT
GGAGGGTTGGCAGACAAACACTTGTGCGTGACGGAAGCAATGCGTCTGTG
GCTTCTTAACAATTTCGGCATTCAAGCCAAGGTGCTACACGATCGCCCTC
CATCCTTCTTTGGGCCCACATCTGTCGCTGACCGCCACCAGATTTTCTTG
CGCCTCGAGCCGCAGCTACGCGCATGGCAGGTGGAAGAGCGGTACTCAGC
AGCGACGGGTGTAGTGGTAGGAGAAGGAGAGACTCTCTTTACGACGCGAA
GGGGGAATGGCAGTAGCAGTAGCGACGTGGCCTTGCGAGAAGCTCAGCGG
CCAGCGCTGATTGTGAGCTCGACGAGTTGGACGGAAGATGAAGACTTTAA
TTTGCTCCTGGAGGCTTTACAAACCGTGGACGCCCAGTGGGCAGCGGCAG
CCATCTCGTCTTCGTACTCCTCCGCTGGGGAGAAAGAAATAGGCAGCGTG
AAGCCTTTCATCGTCGTGGTGGTCACGGGCAAAGGACCCCTCAAGGCCGA
GTACGAGGCACGCATGCGAGTGCTACCCTTCCAACGTATCGCTGTATGCA
CGATGTGGTTAGAGGCGGAAGATTACCCTCGCTTGGTTGGGTGTGCTGAC
TTGGGAGTGTCTCTGCATACCTCCACCTCCGGTATCGATCTCCCCATGAA
GGTCCTGGATATGTTTGGATGTCAAGTACCGGTGTGTGCACTGGGGTTCT
CATCATTATCCGAGCTAGTGCGGCATGGAGAGAATGGACTGGTGTTTCGC
ACCGCAGCGGATTTGGCTGCTTATCTAGAGGAGCTGCTAGGGCGTTTTCC
GATGGAGAAGCAGGAGTTGGATGTATTGCGGGCTGGAGTGGCGGGCATGG
CGCGATGGAAGGAGAACTGGCAGAAGCATGCAGCGCCATATTTATTGAAT
GGGGATGTAGGAGTCAAAAAGGGCGAACAGAAATCGAAGGGCAGGCGGTG
GAGGTGCCTGTCATGGATGCTGGTGCTCGTCGTGATTTATTTGCTTGTCT
TCGAGgtaatcaaaagttaatgagaaattaaaaagagatatcgaaagtga
gcgaaagcaaccgtaaagcaagaaggaagaagtcagaaaaataaaaatta
aaaacggtgcctatgccattcgttttgatttcgtcacaagaatggcgatg
gtagaatgggccactgagagcaacggcacgcaccgcacgcttttgtctac
ggcgagcgagcagcagcctcactcggaagataaggatacctcgaagcttt
ctgagcccaaaaaataccctgctccgtatatggtgatgtggaggccacgg
ttttcatccttgcggcatcctgcacgaactccccccacaaatacagggtc
gagcgcgagagacactctctcatcggcgtgatcacctcccctcactcttt
ttttcggtgtggtgagacccgtacggccccgccccgtcttccaacatagg
gaagacgtctaggtacaccctaccggtcgcacacttcatattagttttgc
taggcgtggtacgtacaataagtgatcaagttctgcggaaaacaaaggat
cttctctagctagcctcccctctccttcctatctctcttgctcaccacat
tcttttctccttaaccttcagGGCACTCTCCCCGCCATTGTCCATTCCAG
TAGCAGCAGCAGAACTTCCCTCACCACCAGCAGCGGCATCAGTCGCAGCT
GCCCTCCCTCTCCTCCCTTCTGCTTCCTCCGCAGCTCCTGCCGAGACTTC
CGCGACAAAGGCATGAGTGGAACAGGCGTGGGCACGAGCGGGAGCCGCGC
CCGGGCGTACACAGATGTGAATGTGCAGCGGCCACGAGAGTATTGGGACT
ACGAAGGATTGACGGTCACATGGGGGGATCAGGAAGAGTACGAGGTGGTA
CGAAAGATCGGCCGGGGGAAGTACAGCGAGGTGTTTGAGGGGGTGAACGC
GGCGAATGGCACCCGCTGCGTGGTCAAGATTCTGAAACCCGTTAAGAAAA
AAAAGATCAAGCGGGAGATCAAGATCTTGCAGAATTTGTGCGGAGGGACG
AATATCATCGAGCTCTTGGATGTGGTGCGGGATCCGCAGTCGAAGACGCC
GTCGTTGATTTTTGAGTACATTCATAACACGGATTTTAAGGTGTTGTATC
CCACACTGACGGACATGGACATTAGATTTTATATGCATGAGTTGCTCAAG
GCATTGGAGTATTGTCACTCGAATGGTATCATGCACAGGGACGTGAAGCC
ACACAATGTGATGATAGACCATGAACGGAGACAGTTGCGGTTGATCGATT
GGGGCTTGGCCGAGTTTTATCATCCCGGGAGGGAATACAATGTGCGGGTA
GCAAGTCGGTATTTTAAGGGACCGGAACTCTTGGTGGATTTCCAGGAGTA
TGATTACAGCTTGGATATGTGGAGCTTGGGATGCATGTTTGCAGGGATGG
TGTTCCGGAAGGAACCTTTTTTCCACGGGCATAATAATTACGACCAGCTG
GTGAAGATCGCCAAGGTCCTGGGGACGGATGATTTATTTACGTACCTGGA
TAAGTATGACTTAGAGTTGGATCCGCAGTTTGACGGGATTCTAGGGAGGC
ATTCGAAGAAAGCCTGGGGAAAGTTCGTGACGCCGGAGAATAGGGCGTTG
GTGAGTGACGAGGCCCTGGATTTTATGGGAAAGTTGTTGAGGTACGATCA
CCAAGAGAGGCTAACGGCCCAGGAGGCAATGGCCCATCCGTATTTTGCGC
CGGTGCGGGCAAATGCCGCGGGGGGGGGGGAGGAGGGGCTGCGGGGGTGA

protein sequence of NO06G00930.1

>NO06G00930.1-protein ID=NO06G00930.1-protein|Name=NO06G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=904bp
MEDIPSHMPSPDAERCRRHVVVLVLGDVGRSPRMQYHALSLAQEDPAMDV
SLVGYRGERCIPAVEKHPNIHVYYVDPFASEALRKKSFLVFAAIKIIALL
FQLFELLLIKLPTRPEMLLVQNPPSIPTLFVAWAVAKLRGAILVIDWHNL
GFSILAHTRGDNHPLVTLAQLYERYFGGLADKHLCVTEAMRLWLLNNFGI
QAKVLHDRPPSFFGPTSVADRHQIFLRLEPQLRAWQVEERYSAATGVVVG
EGETLFTTRRGNGSSSSDVALREAQRPALIVSSTSWTEDEDFNLLLEALQ
TVDAQWAAAAISSSYSSAGEKEIGSVKPFIVVVVTGKGPLKAEYEARMRV
LPFQRIAVCTMWLEAEDYPRLVGCADLGVSLHTSTSGIDLPMKVLDMFGC
QVPVCALGFSSLSELVRHGENGLVFRTAADLAAYLEELLGRFPMEKQELD
VLRAGVAGMARWKENWQKHAAPYLLNGDVGVKKGEQKSKGRRWRCLSWML
VLVVIYLLVFEGTLPAIVHSSSSSRTSLTTSSGISRSCPPSPPFCFLRSS
CRDFRDKGMSGTGVGTSGSRARAYTDVNVQRPREYWDYEGLTVTWGDQEE
YEVVRKIGRGKYSEVFEGVNAANGTRCVVKILKPVKKKKIKREIKILQNL
CGGTNIIELLDVVRDPQSKTPSLIFEYIHNTDFKVLYPTLTDMDIRFYMH
ELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREY
NVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMVFRKEPFFHGHNN
YDQLVKIAKVLGTDDLFTYLDKYDLELDPQFDGILGRHSKKAWGKFVTPE
NRALVSDEALDFMGKLLRYDHQERLTAQEAMAHPYFAPVRANAAGGGEEG
LRG*

Synonyms

Publications