NO06G00880, NO06G00880 (gene) Nannochloropsis oceanica

Overview
NameNO06G00880
Unique NameNO06G00880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length987
Alignment locationchr6:295730..296716 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:295730..296716 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009003Trypsin-like_Pept_dom
Homology
BLAST of NO06G00880 vs. NCBI_GenBank
Match: XP_009845445.1 (hypothetical protein H257_18134 [Aphanomyces astaci] >ETV65086.1 hypothetical protein H257_18134 [Aphanomyces astaci])

HSP 1 Score: 77.0 bits (188), Expect = 1.200e-10
Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = 0
Query:   24 VSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQN 142
            +++T+ F+LP +GM  +E+LSRG+A  VH    K   +         L+  TC+HV  PWR+P  YP  WL++V E     TL + +   G  +    L+P    H S D+ +L L++
Sbjct:    7 LALTTLFRLPHEGMEAFEVLSRGSAMLVHRTRAKRNPSL--------LHVLTCAHVACPWRYPAYYPHEWLQHVDEGFVKHTLALREIGSGATMWEVDLEPHTAVHPSRDLALLELKS 116          
BLAST of NO06G00880 vs. NCBI_GenBank
Match: OQR90569.1 (hypothetical protein THRCLA_09278 [Thraustotheca clavata])

HSP 1 Score: 72.4 bits (176), Expect = 2.900e-9
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0
Query:   21 RMSVSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRL 140
            R  +++T+ F+LP +GM+ YE+LSRG+A       GK      V+      +  TC+HV  PW +P  YP  WL++V E     T+ + D      V  F L+  V+ H S D  VL L
Sbjct:    3 RRVLALTTHFRLPHEGMVEYEVLSRGSAI-----VGK----RMVDKDPTRFHVLTCAHVACPWLFPSYYPNDWLQHVDERFIKYTVALHDLVSNDKVWEFQLENRVMLHSSRDFAVLEL 112          
BLAST of NO06G00880 vs. NCBI_GenBank
Match: XP_008612429.1 (hypothetical protein SDRG_08326 [Saprolegnia diclina VS20] >EQC34117.1 hypothetical protein SDRG_08326 [Saprolegnia diclina VS20])

HSP 1 Score: 71.6 bits (174), Expect = 5.000e-9
Identity = 42/125 (33.60%), Postives = 60/125 (48.00%), Query Frame = 0
Query:   21 RMSVSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYA 146
            R  +++T+ F+LP +GM  YE+LSRG+A        K  S          L+  TC+HV  PW +P  YP  WLE+V E +   TL + D           L+  V  H S D+  L L   ++A
Sbjct:    3 RRVLALTTQFRLPHEGMAAYEVLSRGSAVLGQRMVDKDASR---------LHVLTCAHVACPWLFPAYYPNDWLEHVDEAYVKHTLSLHDEVTCEKAWEIELEAHVTLHGSRDLAALELNLDKHA 118          
BLAST of NO06G00880 vs. NCBI_GenBank
Match: XP_012898320.1 (uncharacterized protein [Blastocystis hominis] >CBK24272.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 70.5 bits (171), Expect = 1.100e-8
Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0
Query:   24 VSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCS-HVTAPWRWPKLYP---LPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYAIRQMAKYGLRLEPLVLGSNVPAP 169
            +++TSW+++P +GM R+E+L+  +  CV   A K              Y F C  HV AP+ +   +P    PWL+YV E++ + T    D   G +  R  +   V+ H+  D+C   L  +E A+  +  YG+   P     + P P
Sbjct:    1 MTVTSWYRVPAKGMDRFELLAMSS--CVPFKASKQYDYK---------YHFVCPFHVVAPYLFKSYFPDSSYPWLQYVTEDNVILTAEFRD-MNGNITNRVGVNNKVIAHNYRDLCCFHLHKEEEALETLKMYGMDPSPSKPPQSQPRP 137          
BLAST of NO06G00880 vs. NCBI_GenBank
Match: OQS01633.1 (hypothetical protein ACHHYP_00524 [Achlya hypogyna])

HSP 1 Score: 68.2 bits (165), Expect = 5.600e-8
Identity = 42/134 (31.34%), Postives = 62/134 (46.27%), Query Frame = 0
Query:   21 RMSVSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYAIRQMAKYGL 155
            R  +++T+ F+LP +GM  YE+LSRG+A      A    S          L+  TC+HV  PW +P  YP  WL++V E +   TL + D           L+  V  H + D+  L L      +  +A Y L
Sbjct:    3 RRVLALTTQFRLPHEGMASYEVLSRGSAILGQRLANLDPSR---------LHVVTCAHVACPWLFPAYYPNDWLQHVDEAYVKHTLSLHDAESCTKTWEIDLESHVSLHPTRDLAALELNLITANVPDLAGYDL 127          
BLAST of NO06G00880 vs. NCBI_GenBank
Match: XP_020427118.1 (hypothetical protein PPL_12018 [Heterostelium album PN500] >EFA74984.1 hypothetical protein PPL_12018 [Heterostelium album PN500])

HSP 1 Score: 65.9 bits (159), Expect = 2.800e-7
Identity = 57/254 (22.44%), Postives = 103/254 (40.55%), Query Frame = 0
Query:   24 VSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYP---LPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYAIRQMAKYGLRLEPLVLGSNVPAPGHPVVSPGFAVEREGKGIGSAHDNNYDNNTAGILEDSDTGKTVHLDLKADEEPRRLCVSMGTVNKYKDRHSRGFAVMDRELGDGMCGAPLLDLRDEGRCIGLVEGI 275
            ++I+S+F+ P+ G+  Y  LSRG+ F V  P+G       + +A+ P+Y  +C+H+T P+ +P LY      W+  + E +    +   D + G V+    ++     H +LD+   R+  +++    +      LE  +     P  GH     G+ +  E   I     + Y  N                     EEP R  V   + +                   GMCG P ++  +E   +G++EG+
Sbjct:  624 LTISSYFKYPEYGVNEYVNLSRGSLFLVKTPSG-------LFSASRPIYAISCAHITHPFNFPFLYKEENHKWIFALGESNIKAEIEYRDPKTGKVLHSLPIEKPYYLHPTLDLVCFRVNLEDFTRSNLPYIPSVLE--LEDYEHPRKGHTGKLFGYQLVNEKDNIMMPLASEYKFNV--------------------EEPNRHFVQTQSASPM-----------------GMCGGPAINFDNE--VVGMIEGL 829          
BLAST of NO06G00880 vs. NCBI_GenBank
Match: GAY02014.1 (Hypothetical protein PINS_009847 [Pythium insidiosum])

HSP 1 Score: 65.1 bits (157), Expect = 4.700e-7
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 0
Query:   21 RMSVSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLY--PLPWLEYVKEE---HTLCTLHV--TDGRRGPVVKRFLLQPTVVHHDSLDVCVLR 139
            R+++S+T+ F LP +GM + E LSRG+AF +     K   TS  E     L   TC HV  PW +PK +     WL++V EE   H+L  L +  T  R   V+    LQ  V  H   DV +L+
Sbjct:   13 RLALSLTTRFCLPHEGMEKLEYLSRGSAFLLQ---DKADMTSLNE-----LKVLTCQHVACPWLFPKYFAEKWDWLQFVSEEFVQHSLQLLEIPSTTSRSASVLVDIPLQQHVWIHPDRDVAMLQ 129          
The following BLAST results are available for this feature:
BLAST of NO06G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 17
Match NameE-valueIdentityDescription
XP_009845445.11.200e-1033.90hypothetical protein H257_18134 [Aphanomyces astac... [more]
OQR90569.12.900e-935.29hypothetical protein THRCLA_09278 [Thraustotheca c... [more]
XP_008612429.15.000e-933.60hypothetical protein SDRG_08326 [Saprolegnia dicli... [more]
XP_012898320.11.100e-828.86uncharacterized protein [Blastocystis hominis] >CB... [more]
OQS01633.15.600e-831.34hypothetical protein ACHHYP_00524 [Achlya hypogyna... [more]
XP_020427118.12.800e-722.44hypothetical protein PPL_12018 [Heterostelium albu... [more]
GAY02014.14.700e-736.80Hypothetical protein PINS_009847 [Pythium insidios... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00880.1NO06G00880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00880.1NO06G00880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00880 ID=NO06G00880|Name=NO06G00880|organism=Nannochloropsis oceanica|type=gene|length=987bp
ATGGCAGCCCGCCGCGCCTTGAGCACCAGCAATAGCAGCGGTGCTACCTT
ACCATTACATCGCATGAGTGTCTCTATCACTTCCTGGTTCCAACTGCCTG
ACCAAGGCATGATGCGGTACGAAATGCTCAGTCGAGGCACGGCCTTTTGC
GTGCACCCGCCTGCAGGGAAAGGAGGCAGCACGAGCCCTGTCGAAGCAGC
AAATGTTCCCCTCTATTTCTTCACCTGCTCACATGTGACGGCACCCTGGC
GCTGGCCAAAACTTTACCCGTTGCCATGGCTGGAGTACGTGAAAGAGGAA
CACACCCTGTGCACGCTGCATGTAACAGATGGGAGGAGGGGCCCGGTAGT
GAAGCGATTCCTACTACAGCCCACCGTCGTCCACCATGACTCGCTAGACG
TGTGTGTGCTTCGACTTCAGAATCAAGAATATGCCATACGGCAGATGGCC
AAGTATGGACTGCGACTTGAGCCCCTTGTACTGGGCAGCAACGTACCCGC
GCCGGGTCATCCCGTGGTCTCGCCAGGTTTTGCAGTGGAGCGCGAAGGAA
AGGGAATAGGCAGTGCCCATGACAACAACTACGACAACAACACTGCCGGG
ATACTTGAAGACTCCGATACTGGCAAGACGGTACATTTAGATCTGAAAGC
AGACGAGGAGCCCCGTCGACTGTGTGTGAGTATGGGCACGGTGAATAAGT
ACAAGGACCGACACAGCCGTGGCTTTGCTGTCATGGACCGTGAATTGGGT
GATGGGATGTGTGGTGCCCCTTTGTTGGATTTAAGGGATGAAGGGAGATG
TATAGGGCTTGTGGAAGGAATTGCTCCACCGATGGAGGAGGAAAAAAAGA
AAGAGGAAGTGGAGGGGATGGAGCCGACGGTGAGAAAAGCGCTGGAGGTC
CGGAGGGCAATTGCGGGGAATGCCGCCTTCATTTATGGCCGTGAGTTGGT
GGATCTTCTTGCGAAAGCTTCTTCAAGCACTCAATAA
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protein sequence of NO06G00880.1

>NO06G00880.1-protein ID=NO06G00880.1-protein|Name=NO06G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=329bp
MAARRALSTSNSSGATLPLHRMSVSITSWFQLPDQGMMRYEMLSRGTAFC
VHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEE
HTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYAIRQMA
KYGLRLEPLVLGSNVPAPGHPVVSPGFAVEREGKGIGSAHDNNYDNNTAG
ILEDSDTGKTVHLDLKADEEPRRLCVSMGTVNKYKDRHSRGFAVMDRELG
DGMCGAPLLDLRDEGRCIGLVEGIAPPMEEEKKKEEVEGMEPTVRKALEV
RRAIAGNAAFIYGRELVDLLAKASSSTQ*
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Synonyms
Publications