NO06G00880, NO06G00880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00880 vs. NCBI_GenBank
Match: XP_009845445.1 (hypothetical protein H257_18134 [Aphanomyces astaci] >ETV65086.1 hypothetical protein H257_18134 [Aphanomyces astaci]) HSP 1 Score: 77.0 bits (188), Expect = 1.200e-10 Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = 0 Query: 24 VSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQN 142 +++T+ F+LP +GM +E+LSRG+A VH K + L+ TC+HV PWR+P YP WL++V E TL + + G + L+P H S D+ +L L++ Sbjct: 7 LALTTLFRLPHEGMEAFEVLSRGSAMLVHRTRAKRNPSL--------LHVLTCAHVACPWRYPAYYPHEWLQHVDEGFVKHTLALREIGSGATMWEVDLEPHTAVHPSRDLALLELKS 116
BLAST of NO06G00880 vs. NCBI_GenBank
Match: OQR90569.1 (hypothetical protein THRCLA_09278 [Thraustotheca clavata]) HSP 1 Score: 72.4 bits (176), Expect = 2.900e-9 Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0 Query: 21 RMSVSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRL 140 R +++T+ F+LP +GM+ YE+LSRG+A GK V+ + TC+HV PW +P YP WL++V E T+ + D V F L+ V+ H S D VL L Sbjct: 3 RRVLALTTHFRLPHEGMVEYEVLSRGSAI-----VGK----RMVDKDPTRFHVLTCAHVACPWLFPSYYPNDWLQHVDERFIKYTVALHDLVSNDKVWEFQLENRVMLHSSRDFAVLEL 112
BLAST of NO06G00880 vs. NCBI_GenBank
Match: XP_008612429.1 (hypothetical protein SDRG_08326 [Saprolegnia diclina VS20] >EQC34117.1 hypothetical protein SDRG_08326 [Saprolegnia diclina VS20]) HSP 1 Score: 71.6 bits (174), Expect = 5.000e-9 Identity = 42/125 (33.60%), Postives = 60/125 (48.00%), Query Frame = 0 Query: 21 RMSVSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYA 146 R +++T+ F+LP +GM YE+LSRG+A K S L+ TC+HV PW +P YP WLE+V E + TL + D L+ V H S D+ L L ++A Sbjct: 3 RRVLALTTQFRLPHEGMAAYEVLSRGSAVLGQRMVDKDASR---------LHVLTCAHVACPWLFPAYYPNDWLEHVDEAYVKHTLSLHDEVTCEKAWEIELEAHVTLHGSRDLAALELNLDKHA 118
BLAST of NO06G00880 vs. NCBI_GenBank
Match: XP_012898320.1 (uncharacterized protein [Blastocystis hominis] >CBK24272.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-8 Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0 Query: 24 VSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCS-HVTAPWRWPKLYP---LPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYAIRQMAKYGLRLEPLVLGSNVPAP 169 +++TSW+++P +GM R+E+L+ + CV A K Y F C HV AP+ + +P PWL+YV E++ + T D G + R + V+ H+ D+C L +E A+ + YG+ P + P P Sbjct: 1 MTVTSWYRVPAKGMDRFELLAMSS--CVPFKASKQYDYK---------YHFVCPFHVVAPYLFKSYFPDSSYPWLQYVTEDNVILTAEFRD-MNGNITNRVGVNNKVIAHNYRDLCCFHLHKEEEALETLKMYGMDPSPSKPPQSQPRP 137
BLAST of NO06G00880 vs. NCBI_GenBank
Match: OQS01633.1 (hypothetical protein ACHHYP_00524 [Achlya hypogyna]) HSP 1 Score: 68.2 bits (165), Expect = 5.600e-8 Identity = 42/134 (31.34%), Postives = 62/134 (46.27%), Query Frame = 0 Query: 21 RMSVSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYPLPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYAIRQMAKYGL 155 R +++T+ F+LP +GM YE+LSRG+A A S L+ TC+HV PW +P YP WL++V E + TL + D L+ V H + D+ L L + +A Y L Sbjct: 3 RRVLALTTQFRLPHEGMASYEVLSRGSAILGQRLANLDPSR---------LHVVTCAHVACPWLFPAYYPNDWLQHVDEAYVKHTLSLHDAESCTKTWEIDLESHVSLHPTRDLAALELNLITANVPDLAGYDL 127
BLAST of NO06G00880 vs. NCBI_GenBank
Match: XP_020427118.1 (hypothetical protein PPL_12018 [Heterostelium album PN500] >EFA74984.1 hypothetical protein PPL_12018 [Heterostelium album PN500]) HSP 1 Score: 65.9 bits (159), Expect = 2.800e-7 Identity = 57/254 (22.44%), Postives = 103/254 (40.55%), Query Frame = 0 Query: 24 VSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLYP---LPWLEYVKEEHTLCTLHVTDGRRGPVVKRFLLQPTVVHHDSLDVCVLRLQNQEYAIRQMAKYGLRLEPLVLGSNVPAPGHPVVSPGFAVEREGKGIGSAHDNNYDNNTAGILEDSDTGKTVHLDLKADEEPRRLCVSMGTVNKYKDRHSRGFAVMDRELGDGMCGAPLLDLRDEGRCIGLVEGI 275 ++I+S+F+ P+ G+ Y LSRG+ F V P+G + +A+ P+Y +C+H+T P+ +P LY W+ + E + + D + G V+ ++ H +LD+ R+ +++ + LE + P GH G+ + E I + Y N EEP R V + + GMCG P ++ +E +G++EG+ Sbjct: 624 LTISSYFKYPEYGVNEYVNLSRGSLFLVKTPSG-------LFSASRPIYAISCAHITHPFNFPFLYKEENHKWIFALGESNIKAEIEYRDPKTGKVLHSLPIEKPYYLHPTLDLVCFRVNLEDFTRSNLPYIPSVLE--LEDYEHPRKGHTGKLFGYQLVNEKDNIMMPLASEYKFNV--------------------EEPNRHFVQTQSASPM-----------------GMCGGPAINFDNE--VVGMIEGL 829
BLAST of NO06G00880 vs. NCBI_GenBank
Match: GAY02014.1 (Hypothetical protein PINS_009847 [Pythium insidiosum]) HSP 1 Score: 65.1 bits (157), Expect = 4.700e-7 Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 0 Query: 21 RMSVSITSWFQLPDQGMMRYEMLSRGTAFCVHPPAGKGGSTSPVEAANVPLYFFTCSHVTAPWRWPKLY--PLPWLEYVKEE---HTLCTLHV--TDGRRGPVVKRFLLQPTVVHHDSLDVCVLR 139 R+++S+T+ F LP +GM + E LSRG+AF + K TS E L TC HV PW +PK + WL++V EE H+L L + T R V+ LQ V H DV +L+ Sbjct: 13 RLALSLTTRFCLPHEGMEKLEYLSRGSAFLLQ---DKADMTSLNE-----LKVLTCQHVACPWLFPKYFAEKWDWLQFVSEEFVQHSLQLLEIPSTTSRSASVLVDIPLQQHVWIHPDRDVAMLQ 129 The following BLAST results are available for this feature:
BLAST of NO06G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00880 ID=NO06G00880|Name=NO06G00880|organism=Nannochloropsis oceanica|type=gene|length=987bpback to top protein sequence of NO06G00880.1 >NO06G00880.1-protein ID=NO06G00880.1-protein|Name=NO06G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=329bpback to top Synonyms
Publications
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