NO06G00820, NO06G00820 (gene) Nannochloropsis oceanica

Overview
NameNO06G00820
Unique NameNO06G00820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2633
Alignment locationchr6:279765..282397 -

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Properties
Property NameValue
DescriptionPentatricopeptide repeat-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:279765..282397 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
Homology
BLAST of NO06G00820 vs. NCBI_GenBank
Match: EWM26138.1 (pentatricopeptide repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 919.8 bits (2376), Expect = 5.700e-264
Identity = 498/799 (62.33%), Postives = 590/799 (73.84%), Query Frame = 0
Query:    3 LLLLFSVLLPLVSTTTKA-----FIPTTPLPVRTRTIMALASXXXXXQYPQEAQDSADKARRFSXXXXXXXXXLSPPPTAQRARSWTSTPLIEWSLRRVGTTPAIDLLESALEERGQGSDLNGEDDGLFTAALKECRSIGDGKRALRYLGIMKHRHMREIDVVSTIHACAAEGLTDDAIGTFRRLAEMKREQGRVISFGSPSYVAIIMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREVEYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVEDAVRLAARLETTSAMVGGVKRGKGKGGGRPQEDEKSFGVRVLTLLEQGQWEAAWRSIQEAETAAGHVPVPAMSYSVLVNAAAKEGRWQDAVDMLLHMREKRGLEPSTVDLSSAINACRMGGEVGMALKLLEVLKIRRQEYATAKSQXXXXXXXXXXXXXXXXXXXXXXXXEQGLQQSVVEEEEAHDPNPYQVSYGLVLDLLAKQLS 797
            LL L +V      TTT A     F+ T P P    +I AL        Y  E+++   ++R               PP     +  + +PL+EWSLRRVGTTPAIDLLE+ALEE    +   G+D+GL TAALKECRSIGDG+RALRYLG++    +REID VSTI+ACAAEGLTD+A+  FRRLA  +R++G V ++G P YVAII+ACSKG RP+DA+AFF EMGV G P PDAACYAAMMETYRR GRA++ALALL+++K  GM E   R APRG HLVLAATIRALTDLGR  EALERF+ A   +SG+IPDGGC+ AALEA ADLG+WRRAL LIEEMGREVEY N RG F+RRQLRVGRQHYVA +RACAKAGE+EQAL +L+DM+TRG +RPDEKC+RWALFACC+  QW RA+ ML+E   PP    PWTLPCYTTTMRALV VG+   VL LW+ LL RGLAPDA TGDIALS+AGK+K WE  +AIF  L  RG+EPY AG+GVV+EGLCQQG+L EA   LRQVS PNVIM+TS+LS MGR G++ GALALLEEMET+AG+TPDHVALTCLVDACLKAG VE+A RLA+RLE  +A+      G+ +G    QEDE+SFGVRV T+LEQG WE AWR+I++AET  GHVPVPAMSYSVL+NAAAKEGRW+DA++MLLHMREKRGLEPSTVDLSSAINACR+GGE   ALKLLE+L +RR+       +                            ++ V E EE  D +PYQV+YGLVLDLLA+Q S
Sbjct:    4 LLSLLTVGALSRRTTTYAFRFIPFLATRPAPPHLCSISAL---RFSNPYRHESREKTGQSRMPHPSPTTLLPHAQQPP---HGKGKSPSPLVEWSLRRVGTTPAIDLLENALEEDRLTNLGVGDDEGLLTAALKECRSIGDGRRALRYLGMVNDYQLREIDCVSTIYACAAEGLTDEAVSVFRRLA--RRKRGPVRAWGPPCYVAIIVACSKGGRPEDAVAFFSEMGVNGEPAPDAACYAAMMETYRRSGRASEALALLEDLKACGMAEAPGRPAPRGSHLVLAATIRALTDLGRPAEALERFDQARGLASGVIPDGGCYGAALEAAADLGDWRRALHLIEEMGREVEYKNVRGTFVRRQLRVGRQHYVAAMRACAKAGESEQALALLRDMRTRGGVRPDEKCHRWALFACCQDAQWRRAYAMLLEGPAPPSCDAPWTLPCYTTTMRALVRVGQTEEVLALWDLLLVRGLAPDAGTGDIALSVAGKQKKWELVKAIFDELQGRGVEPYEAGIGVVIEGLCQQGQLKEALAFLRQVSAPNVIMFTSVLSGMGRAGELAGALALLEEMETKAGVTPDHVALTCLVDACLKAGDVENAGRLASRLE-ANALAQVDCPGQAEG---MQEDERSFGVRVRTMLEQGYWEDAWRTIKDAETVEGHVPVPAMSYSVLLNAAAKEGRWRDALEMLLHMREKRGLEPSTVDLSSAINACRVGGETRTALKLLELLDLRRRARGRLGKRAAEPCHRNGGKVLP--------------RREVAESEE--DLSPYQVTYGLVLDLLARQAS 774          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_005856347.1 (pentatricopeptide repeat10, partial [Nannochloropsis gaditana CCMP526] >EKU20003.1 pentatricopeptide repeat10, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 628.2 bits (1619), Expect = 3.400e-176
Identity = 324/490 (66.12%), Postives = 379/490 (77.35%), Query Frame = 0
Query:  307 SSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREVEYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVEDAVRLAARLETTSAMVGGVKRGKGKGGGRPQEDEKSFGVRVLTLLEQGQWEAAWRSIQEAETAAGHVPVPAMSYSVLVNAAAKEGRWQDAVDMLLHMREKRGLEPSTVDLSSAINACRMGGEVGMALKLLEVLKIRRQEYATAKSQXXXXXXXXXXXXXXXXXXXXXXXXEQGLQQSVVEEEEAHDPNPYQVSYGLVLDLLAKQLS 797
            +SG+IPDGGC+ AALEA ADLG+WRRAL LIEEMGREVEY N RG F+RRQLRVGRQHYVA +RACAKAGE+EQAL +L+DM+TRG +RPDEKC+RWALFACC+  QW RA+ ML+E   PP    PWTLPCYTTTMRALV  G+   VL LW+ LL RGLAPDA TGDIALS+AGK+K WE  +AIF  L  RG+EPY AG+GVV+EGLCQQG+L EA   LRQVS PNVIM+TS+LS MGR G++ GALALLEEMET+AG+TPDHVALTCLVDACLKAG VE+A RLA+RLE  +A+      G+ +G    QEDE+SFGVRV T+LEQG WE AWR+I++AET  GHVPVPAMSYSVL+NAAAKEGRW+DA++MLLHMREKRGLEPSTVDLSSAINACR+GGE   ALKLLE+L +RR+       +                            ++ V E EE  D +PYQV+YGLVLDLLA+Q S
Sbjct:   57 ASGVIPDGGCYGAALEAAADLGDWRRALHLIEEMGREVEYKNVRGTFVRRQLRVGRQHYVAAMRACAKAGESEQALALLRDMRTRGGVRPDEKCHRWALFACCQDAQWRRAYAMLLEGPAPPSCDAPWTLPCYTTTMRALVRAGQTEEVLALWDLLLVRGLAPDAGTGDIALSVAGKQKKWELVKAIFDELQGRGVEPYEAGIGVVIEGLCQQGQLKEALAFLRQVSAPNVIMFTSVLSGMGRAGELAGALALLEEMETKAGVTPDHVALTCLVDACLKAGDVENAGRLASRLE-ANALAQVDCPGQAEG---MQEDERSFGVRVRTMLEQGYWEDAWRTIKDAETVEGHVPVPAMSYSVLLNAAAKEGRWRDALEMLLHMREKRGLEPSTVDLSSAINACRVGGETRTALKLLELLDLRRRARGRLGKRAAEPCHRNGGKVLP--------------RREVAENEE--DLSPYQVTYGLVLDLLARQAS 526          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_005856350.1 (mitochondrial protein, partial [Nannochloropsis gaditana CCMP526] >EKU20006.1 mitochondrial protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 236.1 bits (601), Expect = 3.800e-58
Identity = 118/169 (69.82%), Postives = 142/169 (84.02%), Query Frame = 0
Query:   85 STPLIEWSLRRVGTTPAIDLLESALEERGQGSDLNGEDDGLFTAALKECRSIGDGKRALRYLGIMKHRHMREIDVVSTIHACAAEGLTDDAIGTFRRLAEMKREQGRVISFGSPSYVAIIMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDAL 254
            ++PL+EWSLRRVGTTPAIDLLE+ALEE    +   G+D+GL TAALKECRSIGDG+RALRYLG++    +REID VSTI+ACAAEGLTD+A+  FRRLA  +R++G V ++G P YVAII+ACSKG RP+DA+AFF EMGV G P PDAACYAAMMETYRR GRA++AL
Sbjct:    1 TSPLVEWSLRRVGTTPAIDLLENALEEDRLTNLGVGDDEGLLTAALKECRSIGDGRRALRYLGMVNDYQLREIDCVSTIYACAAEGLTDEAVSVFRRLA--RRKRGPVRAWGPPCYVAIIVACSKGGRPEDAVAFFSEMGVNGEPAPDAACYAAMMETYRRSGRASEAL 167          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_011070072.1 (pentatricopeptide repeat-containing protein At5g27110 isoform X1 [Sesamum indicum] >XP_011070073.1 pentatricopeptide repeat-containing protein At5g27110 isoform X1 [Sesamum indicum])

HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11
Identity = 100/438 (22.83%), Postives = 177/438 (40.41%), Query Frame = 0
Query:  175 AIGTFRRLAEMKREQGRVISFGSPSYVAI----IMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLA-ATIRALTDLGRA---GEALERFELALDG-SSGIIPD----GGCFAAALEAVADLGN-----WRRALGLIEEMGREVEYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPD---EKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVED 592
            A G  RR+   ++    ++  G  S V I    I   +K      A+  F EM     P  D AC+  ++  Y + G+   AL   + M+  G+        P  +    A ++   L DL R     E + R  L +D   S  + D     GC   A E   ++ N     W   +G   ++G  V  I         ++R       ++L ACAK+ + +   + L     R ++R D   E       F C       R F M+     P  S + W +      +   V+ G     L++++++   G++PDA T   A++   +    E  + +   +    +      +G +L+   + G +++A  +  Q+S  +++ +TS++ A G  G    AL L +EM  +  I PD V    ++ AC  AG V++
Sbjct:  116 ACGGLRRVDYGEKIHNHLMKIGFLSDVVIASSLIGVYAKCGLFASAVKLFDEM-----PERDLACWNNVISCYYQSGQCQKALEYYERMRSNGL-------RPDSVSFTTAISSCARLLDLERGQRIHEEVLRSGLVMDAYVSATLVDMYGKCGCLERAKEVFDEIRNKSLVSWNAMIGGYSQVGDSVSCIELLVRMNEEKVRPSSTTISSLLVACAKSAQLQHG-KFLHGYIMRNNVRSDIFVESSLVDLYFKCGSVALAERVFHMM-----PKSSVVAWNV-----MISGYVSAGCYFEALSIYDEMREAGISPDAITFTSAVAACSQLAALERGKELHKCIIECRLNSNEVLMGALLDMYAKCGAVEQAASIFNQLSTRDLVSWTSMIVAYGSHGQAFEALKLFDEMLLK-HIRPDRVTFLAVISACSHAGLVDE 529          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_020547661.1 (pentatricopeptide repeat-containing protein At5g27110 isoform X2 [Sesamum indicum])

HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11
Identity = 100/438 (22.83%), Postives = 177/438 (40.41%), Query Frame = 0
Query:  175 AIGTFRRLAEMKREQGRVISFGSPSYVAI----IMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLA-ATIRALTDLGRA---GEALERFELALDG-SSGIIPD----GGCFAAALEAVADLGN-----WRRALGLIEEMGREVEYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPD---EKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVED 592
            A G  RR+   ++    ++  G  S V I    I   +K      A+  F EM     P  D AC+  ++  Y + G+   AL   + M+  G+        P  +    A ++   L DL R     E + R  L +D   S  + D     GC   A E   ++ N     W   +G   ++G  V  I         ++R       ++L ACAK+ + +   + L     R ++R D   E       F C       R F M+     P  S + W +      +   V+ G     L++++++   G++PDA T   A++   +    E  + +   +    +      +G +L+   + G +++A  +  Q+S  +++ +TS++ A G  G    AL L +EM  +  I PD V    ++ AC  AG V++
Sbjct:   39 ACGGLRRVDYGEKIHNHLMKIGFLSDVVIASSLIGVYAKCGLFASAVKLFDEM-----PERDLACWNNVISCYYQSGQCQKALEYYERMRSNGL-------RPDSVSFTTAISSCARLLDLERGQRIHEEVLRSGLVMDAYVSATLVDMYGKCGCLERAKEVFDEIRNKSLVSWNAMIGGYSQVGDSVSCIELLVRMNEEKVRPSSTTISSLLVACAKSAQLQHG-KFLHGYIMRNNVRSDIFVESSLVDLYFKCGSVALAERVFHMM-----PKSSVVAWNV-----MISGYVSAGCYFEALSIYDEMREAGISPDAITFTSAVAACSQLAALERGKELHKCIIECRLNSNEVLMGALLDMYAKCGAVEQAASIFNQLSTRDLVSWTSMIVAYGSHGQAFEALKLFDEMLLK-HIRPDRVTFLAVISACSHAGLVDE 452          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: OMO62011.1 (Cytochrome P450 [Corchorus olitorius])

HSP 1 Score: 79.7 bits (195), Expect = 4.500e-11
Identity = 98/413 (23.73%), Postives = 164/413 (39.71%), Query Frame = 0
Query:  214 DDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLA-ATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREV-EYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFACCKGG--QWGR--------------------AFDMLME-----------EEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVED 592
            D A   F EM     P  D AC+  ++  Y + GRA  AL LL  M+  G         P  + L +A ++   L DL R  E     EL  D   GI+ DG   +A ++     G          EM +EV E I  +GV            + +++   +  G++   +E+ + M   G I+P        L AC +    Q+G+                      D+  +           E  P    + W +      +   V+VG+    L  +E ++  GL PDA T    L+   +    E  + I   +T   +E     +G +L+   + G +DEA  +   +   +++ +TS+++A G  G    AL+L  EM+ ++   PD V    ++ AC   G V++
Sbjct:  158 DQATRMFDEM-----PERDVACWNTVISCYYQDGRAEKALELLGKMRDAGF-------EPNSVTLTVAISSCARLMDLERGKEI--HGELVKD---GIVLDGFFGSALVDMYGKCG--------CLEMAKEVFEQIPEKGVVT----------WNSMISGYSSVGDSRSCIELFRRMNAEG-IKPSLTTLSSILMACSRSAQLQYGKFIHGYIIRNMIGADIFVNNCLIDLYFKCGNFHSAESIFEMMPKTDVVSWNV-----MISGFVSVGKYFDALITYEDMIKAGLNPDAVTFSSVLAACSQLAALEKGKEIHNSITQSSLERNEVVMGALLDMYAKCGAVDEAFRIFCNLPERDLVSWTSMITAYGSHGRALEALSLFGEMQ-KSSSKPDAVTFLAVLSACSHGGLVDE 528          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: CBN76224.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 78.6 bits (192), Expect = 1.000e-10
Identity = 120/517 (23.21%), Postives = 191/517 (36.94%), Query Frame = 0
Query:  224 GVGG---IPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGM---------------VEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREVEYINSRGV-------------FLRRQLRVGRQH-------------YVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQ------GRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTG------ALALLEEMETEAGITPDHVALTCLVDACLKAGKVEDAVRLAARLETTSAMVGGVKRGKGKGGGRPQEDEKSFGVRVLTLLEQGQWEAAWRSIQEAETAAGHVPVPAMSYSVLVNAAAKEGRWQDAVDML 685
            G GG    P  DA  + + ME     GR  +  ALL  M   G+                 G  + A   L  +  A  +A T +G +GE         + ++G+ PD GC+AA +  + + G W++AL L+  + R+     + G               L  + R G                Y A L ACA+A E   AL++L++M+ RG    D + +  A+ AC   GQW +A  +L         ++       T    A    G G R+ T   +       PDA +   A++  G     + A  +   + S G EP V     V+  + +       G   E   +       +        +  G  G+  G      A  LL EM  EAG+TP+      ++  C +A   E A      LE  + M  G  +   + G R   D  + G  V T +E+                    P   +S++  + A  K G+W+ A+ +L
Sbjct:  340 GTGGGAAWPAADAVSFNSAMEACAIAGRWQEGTALLPRMLEVGVRPDVCSYGGHLACLRAGGQWQRAVEVLDEMTKAAAKAGTGIGGSGE---------EEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATWGEEPAARXXXXXXWDALAAEARGGGAAISSSPAAGPNLVCYNAALTACARAKEGSTALDLLEEMEGRGVF--DTESFNCAMLACRGKGQWHKATAILNRMVSGDAVRL-GEGSGGTAGGAAAGEGGWGARLRTTVPR-------PDAYSFASAITACGDVGRADVALELLRKMKSAGAEPNVVVFNAVIRAVSRGITGPAFGATPERAGVTAAWEEGSAAGDGYAAAGRGEGGEKAGRDSWRRAYFLLVEMR-EAGLTPEVKTYNTVLAVCQRAEAWEGA------LEVLAEMKSGTAKRPARSGPR-DRDASAHGAAVSTWIEEPA-----------------PPPDLVSFNTAMGACGKAGQWEKALSLL 812          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_015876554.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 78.2 bits (191), Expect = 1.300e-10
Identity = 89/406 (21.92%), Postives = 150/406 (36.95%), Query Frame = 0
Query:  231 PDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWR-------RALGLIEEMGREVE-----------YINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFAC-----------------------------------CKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDAC 584
            PD      ++  Y ++ R  DA  L + M  R  V                A I   + +G A EALE F L +  + G  P+   +  A+ A A  GN R       R   + +E+G  V             +NS G+     L      + ++L      GE E+AL+I      +  +  +E      L AC                                    K G+   A    +E +QP        LP +T  +   V  G+G   + L+ +L   GL P+  T    L     EK+    + + +++   G   ++  V  +L+   + G L++  E+ +Q+   NVI + SL+S     G    A+ LL++M  + G  P+    + ++  C
Sbjct:   33 PDVYTNNHLLSMYTKFKRMVDARNLFEIMPERNFVS-------------WTALISGYSQMGMAEEALECFRLMV--NDGFSPNDYTYVGAISACARTGNARYGKAIHGRIYRMEKELGSLVNNSLVNMYGKCGLLNSAGLVFDANLEPDSVSWTSLLSCYCHCGETEEALKIFL-RSLKAGVAVNEFSCATVLSACAALENLLVGMQTHPLIIKCGLALDKFVRTGLVDLYAKCGELELAHQAFLEVDQP-------ELPIWTALLGGFVQQGKGRDAIDLFHRLYYSGLKPNERTFSSVLGAFADEKDIAVGKRLHSLIIKMGFSSFIFVVNAILDFYSKCGLLEDTLEIFKQMDEHNVISWNSLISGFVSSGQYGEAIDLLKDMLCK-GFDPNLFTYSIILSIC 414          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_021653412.1 (pentatricopeptide repeat-containing protein At5g27110-like [Hevea brasiliensis])

HSP 1 Score: 78.2 bits (191), Expect = 1.300e-10
Identity = 94/396 (23.74%), Postives = 161/396 (40.66%), Query Frame = 0
Query:  216 ALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGRE--------VEYINSRG-------VFLRRQLRVGRQHYV---AVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWAL---FACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVE 591
            A+  F EM     P  D A +  ++  Y +YG A  AL L D M+  G            L  V+++  R L DL R G+ + R  +     SG + DG   +A ++     G    A  + E+M ++        +   +S G       +F R  +   +       ++L AC++A +       L     R SI  D       +   F C +       F+ML              + C+   +   V VG     L +++ +   G+ PDA T    LS   +    E  + I   ++ RG+E     +G +L+   + G +DEA  +  ++   +++ +TS+++A G  G    AL L  EM+ ++   PD V    ++ AC  AG V+
Sbjct:  160 AIQLFDEM-----PERDVASWNTVISCYYQYGDAKKALELFDKMRESGFEPNLVT-----LTTVISSCAR-LLDLER-GKEIHREMM----KSGKVLDGFVSSALVDLYGKCGCLDIAKDIFEQMPKKTLVAWNSMISGYSSVGDSRECIELFKRMNIEGTKPTLTTLSSILMACSRAAQLRHG-RFLHGYVIRNSIEADIFVNSGLIDLYFKCGRVQSAENVFEMLPRA----------NVVCWNVMISGYVTVGNYFEALNMYDDMKVAGVKPDAVTFSSVLSACSQLAALEKGKEIHNCISERGLESNEIVMGALLDMYAKCGAVDEAYNVFNKLPERDLVSWTSMITAYGSHGQALEALRLFGEMQ-QSNAKPDAVTFLEVLSACSHAGLVD 527          
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_021653376.1 (pentatricopeptide repeat-containing protein At5g27110-like [Hevea brasiliensis])

HSP 1 Score: 78.2 bits (191), Expect = 1.300e-10
Identity = 94/396 (23.74%), Postives = 161/396 (40.66%), Query Frame = 0
Query:  216 ALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGRE--------VEYINSRG-------VFLRRQLRVGRQHYV---AVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWAL---FACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVE 591
            A+  F EM     P  D A +  ++  Y +YG A  AL L D M+  G            L  V+++  R L DL R G+ + R  +     SG + DG   +A ++     G    A  + E+M ++        +   +S G       +F R  +   +       ++L AC++A +       L     R SI  D       +   F C +       F+ML              + C+   +   V VG     L +++ +   G+ PDA T    LS   +    E  + I   ++ RG+E     +G +L+   + G +DEA  +  ++   +++ +TS+++A G  G    AL L  EM+ ++   PD V    ++ AC  AG V+
Sbjct:  160 AIQLFDEM-----PERDVASWNTVISCYYQYGDAKKALELFDKMRESGFEPNLVT-----LTTVISSCAR-LLDLER-GKEIHREMM----KSGKVLDGFVSSALVDLYGKCGCLDIAKDIFEQMPKKTLVAWNSMISGYSSVGDSRECIELFKRMNIEGTKPTLTTLSSILMACSRAAQLRHG-RFLHGYVIRNSIEADIFVNSGLIDLYFKCGRVQSAENVFEMLPRA----------NVVCWNVMISGYVTVGNYFEALNMYDDMKVAGVKPDAVTFSSVLSACSQLAALEKGKEIHNCISERGLESNEIVMGALLDMYAKCGAVDEAYNVFNKLPERDLVSWTSMITAYGSHGQALEALRLFGEMQ-QSNAKPDAVTFLEVLSACSHAGLVD 527          
The following BLAST results are available for this feature:
BLAST of NO06G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26138.15.700e-26462.33pentatricopeptide repeat-containing protein [Nanno... [more]
XP_005856347.13.400e-17666.12pentatricopeptide repeat10, partial [Nannochlorops... [more]
XP_005856350.13.800e-5869.82mitochondrial protein, partial [Nannochloropsis ga... [more]
XP_011070072.13.500e-1122.83pentatricopeptide repeat-containing protein At5g27... [more]
XP_020547661.13.500e-1122.83pentatricopeptide repeat-containing protein At5g27... [more]
OMO62011.14.500e-1123.73Cytochrome P450 [Corchorus olitorius][more]
CBN76224.11.000e-1023.21conserved unknown protein [Ectocarpus siliculosus][more]
XP_015876554.11.300e-1021.92PREDICTED: pentatricopeptide repeat-containing pro... [more]
XP_021653412.11.300e-1023.74pentatricopeptide repeat-containing protein At5g27... [more]
XP_021653376.11.300e-1023.74pentatricopeptide repeat-containing protein At5g27... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000369NSK000369Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00820.1NO06G00820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100014g42gene4403Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00820.1NO06G00820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00820 ID=NO06G00820|Name=NO06G00820|organism=Nannochloropsis oceanica|type=gene|length=2633bp
ACAGGAATCTGCAGCAAGCCAGCGATGCCTTTGTAAGTTCATCCTTTTTT
GCTGCGTGTCAGCCACTCTAGCCTTATTCCAGCTCAAGGAGACATGCACC
TTCTGCTCCTCTTCAGCGTCCTCCTTCCCCTCGTTTCGACGACGACCAAG
GCATTCATCCCCACAACTCCACTGCCCGTACGCACCCGCACCATCATGGC
CTTGGCTTCCTCTTCCTCATCGAATCAGTATCCGCAGGAAGCCCAGGACA
GCGCGGACAAGGCTCGACGTTTCTCCTCCTCTACCGCGTCATCGAAGAGA
CCACTTTCACCACCGCCTACAGCGCAGCGTGCTCGATCCTGGACCTCAAC
GCCATTAATTGAATGGTCCCTGCGACGCGTGGGCACGACGCCAGCTATTG
ATTTGTTGGAAAGTGCTTTGGAGGAACGTGGACAGGGGAGCGACTTGAAT
GGCGAAGACGACGGGCTCTTCACGGCAGCCCTCAAGGAGTGCCGCTCCAT
CGGTGACGGCAAGCGGGCGTTACGGTACCTGGGCATTATGAAGCACCGAC
ACATGCGGGAAATAGATGTTGTGTCCACCATCCATGCCTGCGCGGCCGAA
GGGCTGACGGACGACGCAATCGGTACTTTTCGACGTCTTGCAGAAATGAA
AAGGGAACAAGGACGCGTCATTTCTTTCGGCTCACCAAGCTACGTGGCCA
TCATAATGGCCTGCAGCAAGGGCAACCGCCCGGATGATGCCCTGGCCTTC
TTTCAAGAAATGGGGGTGGGTGGCATCCCTCCACCAGATGCAGCGTGCTA
TGCAGCCATGATGGAAACTTACCGCCGCTATGGCCGAGCGACAGATGCCC
TCGCCCTTCTCGACAACATGAAAGTACGTGGCATGGTGGAAGGCCACAGC
CGAGCAGCCCCTCGAGGGTTACATCTAGTGCTGGCGGCTACTATAAGGGC
TTTGACAGATTTGGGCCGCGCAGGGGAGGCGTTGGAAAGGTTTGAGTTGG
CCTTGGATGGGAGCTCGGGTATCATCCCCGATGGAGGGTGTTTCGCAGCG
GCGCTTGAAGCCGTGGCCGATTTGGGGAATTGGCGAAGGGCTTTGGGTTT
GATTGAGGAGATGGGTCGCGAGGTGGAGTACATCAATTCAAGGGGGGTTT
TCCTCCGGCGGCAGCTACGGGTGGGGAGACAGCATTATGTGGCGGTGTTG
CGGGCTTGTGCCAAGGCAGGGGAGGCAGAACAGGCCTTGGAGATTTTACA
AGACATGCAGACTCGTGGCAGCATACGACCGGACGAAAAATGTTATCGCT
GGGCGTTGTTTGCCTGTTGCAAGGGCGGGCAGTGGGGCCGAGCCTTCGAC
ATGCTGATGGAGGAGGAGCAGCCCCCCTTGAGTCAAATCCCGTGGACTCT
GCCCTGTTACACCACCACCATGCGTGCCCTCGTCAATGTGGGAGAAGGAC
CGCGAGTGCTCACACTGTGGGAGAAGCTCTTAGCGCGTGGCCTGGCCCCG
GATGCGGCCACGGGAGATATAGCTTTGAGCATGGCGGGAAAGGAGAAAAA
TTGGGAGGCAGCCGAGGCGATATTTGCCGTGTTGACAAGTCGAGGGATGG
AGCCTTACGTGGCAGGTGTGGGGGTAGTGTTGGAGGGTCTGTGTCAGCAG
GGAAGGTTGGATGAGGCGAGAGAATTATTGAGGCAAGTGTCGGTGCCAAA
TGTGATAATGTACACGAGTCTGTTGTCGGCGATGGGGAGGGTGGGGGACG
TGACGGGGGCTCTGGCATTGTTGGAGGAGATGGAGACTGAGGCGGGTATC
ACTCCGGATCACGTGGCTTTGACGTGTTTGGTAGACGCGTGTTTGAAAGC
GGGGAAGGTGGAGGATGCGGTCCGCTTGGCGGCGCGACTGGAGACGACGA
GCGCTATGGTGGGTGGGGTGAAGAGAGGGAAGGGCAAGGGTGGGGGAAGG
CCGCAGGAAGATGAAAAAAGCTTTGGTGTGCGGGTGCTGACGCTGCTAGA
GCAGGGGCAGTGGGAGGCGGCCTGGCGGAGTATTCAAGAAGCAGAGACTG
CCGCGGGGCACGTGCCGGTCCCGGCAATGAGCTACAGTGTCTTGGTGAAC
GCAGCGGCGAAAGAGGGGCGGTGGCAGGACGCAGTGGACATGTTGCTCCA
CATGCGGGAGAAGCGAGGCTTGGAACCTAGCACCGTGGATCTTTCCTCGG
CGATCAACGCCTGTCGGATGGGGGGAGAGGTGGGCATGGCTCTGAAGCTG
CTGGAGGTCCTCAAAATTCGACGGCAAGAGTATGCGACGGCCAAGAGTCA
AGGGAGGAAGGGTGGCAAGGGCGGGAAGGGTCGTGGGAAGAAGGGGGAGG
ATTCCTCGAAGAAGATGGAAAAAGAGCAGGGCCTGCAGCAGTCAGTGGTA
GAGGAAGAGGAGGCGCACGATCCCAATCCCTACCAGGTCAGTTACGGGTT
GGTGCTGGACTTGCTCGCAAAGCAATTGTCCTCATCCTCTTCCGCGTCCT
CGGCCCAATCCTCGTCCTCGTAGATTCTGTGAGCTGTAATGGAAAAATAC
ACAACAAAAAATTGTAACAACAACGGGCAGAAAGACAAATTTTTCGACTA
CAAAATAAAGTATATGAGTAATATCTATGATGA
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protein sequence of NO06G00820.1

>NO06G00820.1-protein ID=NO06G00820.1-protein|Name=NO06G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=810bp
MHLLLLFSVLLPLVSTTTKAFIPTTPLPVRTRTIMALASSSSSNQYPQEA
QDSADKARRFSSSTASSKRPLSPPPTAQRARSWTSTPLIEWSLRRVGTTP
AIDLLESALEERGQGSDLNGEDDGLFTAALKECRSIGDGKRALRYLGIMK
HRHMREIDVVSTIHACAAEGLTDDAIGTFRRLAEMKREQGRVISFGSPSY
VAIIMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRAT
DALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERF
ELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREVEYINSR
GVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKC
YRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVG
EGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSR
GMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRV
GDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVEDAVRLAARLE
TTSAMVGGVKRGKGKGGGRPQEDEKSFGVRVLTLLEQGQWEAAWRSIQEA
ETAAGHVPVPAMSYSVLVNAAAKEGRWQDAVDMLLHMREKRGLEPSTVDL
SSAINACRMGGEVGMALKLLEVLKIRRQEYATAKSQGRKGGKGGKGRGKK
GEDSSKKMEKEQGLQQSVVEEEEAHDPNPYQVSYGLVLDLLAKQLSSSSS
ASSAQSSSS*
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Synonyms
Publications