NO06G00780, NO06G00780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00780 vs. NCBI_GenBank
Match: EWM26102.1 (Zinc finger, HIT-type [Nannochloropsis gaditana]) HSP 1 Score: 266.9 bits (681), Expect = 4.700e-68 Identity = 140/188 (74.47%), Postives = 150/188 (79.79%), Query Frame = 0 Query: 1 MSKRNRSAWDEAMVQAGAAASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNYVGNVEEEPDEEYVDSEDGNRPTAKREAKRRRNAAPKSGQASKLISSFRKKSVAQWVYEAGYNPSDGPNYLTAAAKPSRLPTRHFCSVCGYWGLYACTRCGMRYCCGKCAETHKETRCLKFAT 189 MS RSAWDEAM AGA + KKK KR+SGR VLSKAM VDEETR EVRDARLEALEADNYV N EE DE YVDSE+ RP KREAKR+R+ A + A+KLISSFRKK +AQWVYEAGY S+GPNYLTAAA+PS LPTR FCSVCGYWGLY CTRCGMRYC KCAETHKETRCLKFAT Sbjct: 1 MSTNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYVDSEEEGRPKVKREAKRKRSMAQRQQMANKLISSFRKKPLAQWVYEAGYERSNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFAT 188
BLAST of NO06G00780 vs. NCBI_GenBank
Match: XP_009836185.1 (hypothetical protein H257_11047 [Aphanomyces astaci] >ETV74527.1 hypothetical protein H257_11047 [Aphanomyces astaci]) HSP 1 Score: 138.7 bits (348), Expect = 1.900e-29 Identity = 82/191 (42.93%), Postives = 119/191 (62.30%), Query Frame = 0 Query: 2 SKRNRSAWDEAMVQAGAAASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNYVGNVEEEPDEEYV--DSEDGNRPT-AKREAKRRRNAAPKSGQASKLISSFRKKSVAQWVYEA---GYNPSDGPNYLTAAAKPSRLPTRHFCSVCGYWGLYACTRCGMRYCCGKCAETHKETRCLKF 187 +K + WD+ M +G A + K S KR SGRT +SKAM VDEETR +VR+ARL+ALEADNY+ + + ++ +V D +D +PT K +AK ++ P++ +++ + KS+ Q ++E G + +D NY+TAA KP++ P RHFC VCG Y C RCG ++CC +C HKET CLKF Sbjct: 3 AKNAKRQWDQTMASSGLAVPGSAKVSRKRFSGRTVKISKAMKHVDEETRRQVRNARLDALEADNYMESTDGADEDMFVLDDDDDAKKPTKPKSKAKANKHQVPQALGRHRMVR--KVKSLRQLIFEECGDGMSSTD-INYVTAAVKPAKTPPRHFCCVCGLLSSYTCGRCGSKFCCVRCGNQHKETGCLKF 190
BLAST of NO06G00780 vs. NCBI_GenBank
Match: CBJ28040.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 138.3 bits (347), Expect = 2.500e-29 Identity = 91/194 (46.91%), Postives = 110/194 (56.70%), Query Frame = 0 Query: 1 MSKRNRSAWDEAMVQAGAAASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNYVGNVEEEPDEEYV---DSEDGNRPTAKREAKRRRNAAPKSGQASKLISSFRKKSVAQWVYEAGYNPSDGPNYLTAA---AKPSRLPTRHFCSVCGYWGLYACTRCGMRYCCGKCAETHKETRCLKFAT 189 MS+ R AWD + +G +R K KR SGRT VLSK+M VDEETR +V+DARLEALEADNY + E D+E+ D E G+RP + A + + KS+ Q +YE S P TA A S+ P R FCSVCGY GLY CTRCG R+C KC E HKETRCLKFA+ Sbjct: 1 MSQSKRKAWDATVQASGHVPTRTKT---KRASGRTVVLSKSMRVVDEETRNQVKDARLEALEADNYTEDHGGEQDDEFALDEDDERGDRPRGRSRAGKAPXXXXXXXGEKDPWKERKFKSLHQVLYELTNELSAYPGGATAVSIEAPVSKHPPRAFCSVCGYHGLYTCTRCGSRFCSSKCYEQHKETRCLKFAS 191
BLAST of NO06G00780 vs. NCBI_GenBank
Match: XP_008617788.1 (hypothetical protein SDRG_13475 [Saprolegnia diclina VS20] >EQC28793.1 hypothetical protein SDRG_13475 [Saprolegnia diclina VS20]) HSP 1 Score: 137.1 bits (344), Expect = 5.600e-29 Identity = 88/191 (46.07%), Postives = 113/191 (59.16%), Query Frame = 0 Query: 2 SKRNRSAWDEAMVQAGAAASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNYVGNVEEEPDEEYVDSED--GNRPTAKREAKRRRNA--APKSGQASKLISSFRKKSVAQWVY-EAGYNPSDGPNYLTAAAKPSRLPTRHFCSVCGYWGLYACTRCGMRYCCGKCAETHKETRCLKFA 188 SK + WD+ M +G A A + KR SGR +SKAM VDEETR +VR+ARL+ALEADNYV E+ DE+ ED G + +K AK + A P S + + + KS+AQ V+ E G GPNY+TAA KP+ P R FC VCG + YAC RCG R+C KC + H+ET CLKF+ Sbjct: 3 SKNAKRQWDQTMASSGLALPAAPR---KRNSGRAVKISKAMKLVDEETRKQVRNARLDALEADNYVEPTEDGEDEDLYIEEDAMGPKKPSKSRAKGKAKAPIVPVSSSGRRRVVR-KVKSLAQLVFEECGTGEGLGPNYVTAAVKPATTPPRKFCVVCGLFSNYACGRCGSRFCSVKCGDQHRETGCLKFS 189
BLAST of NO06G00780 vs. NCBI_GenBank
Match: XP_012207725.1 (hypothetical protein SPRG_13358 [Saprolegnia parasitica CBS 223.65] >KDO21548.1 hypothetical protein SPRG_13358 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 133.3 bits (334), Expect = 8.100e-28 Identity = 88/197 (44.67%), Postives = 115/197 (58.38%), Query Frame = 0 Query: 2 SKRNRSAWDEAMVQAGAAASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNYVGNVEEEPDEEYVDSED--GNRPTAKREAKRRRNA--APKSGQASKLISSFRKKSVAQWVY-EAGYNPSDGPNYLTAAAKPSRLPTRHFCSVCGY------WGLYACTRCGMRYCCGKCAETHKETRCLKFA 188 SK + WD+ M +G A A + KR SGR +SKAM VDEETR +VR+ARL+ALEADNYV E+ DE+ +D G + ++K AK + A P S + + + KS+AQ V+ E G GPNY+TAA KP+ P R FC VCGY + YAC RCG R+C KC + H+ET CLKF+ Sbjct: 3 SKNAKRQWDQTMASSGLALPTAPR---KRNSGRAVKISKAMKHVDEETRKQVRNARLDALEADNYVEPTEDGDDEDLYIEDDAVGPKKSSKSRAKGKAKAPVVPISSSGRRRVVR-KVKSLAQLVFEECGTGEGLGPNYVTAAVKPATTPPRKFCVVCGYPFDRTLFSNYACGRCGSRFCSVKCGDQHRETGCLKFS 195
BLAST of NO06G00780 vs. NCBI_GenBank
Match: OQR86981.1 (hypothetical protein ACHHYP_09634 [Achlya hypogyna]) HSP 1 Score: 127.1 bits (318), Expect = 5.800e-26 Identity = 87/216 (40.28%), Postives = 113/216 (52.31%), Query Frame = 0 Query: 2 SKRNRSAWDEAMVQAGAAASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNYVGNVEEEPDEEYVDSEDGNRPTAKREAKRRRNAAPKSGQASKLISSFRK-----KSVAQWVYEAGYNPSD--GPNYLTAAAKPSRLPTRHFCSVCGY------------------------WGLYACTRCGMRYCCGKCAETHKETRCLKF 187 SK + WD+ M +G A +A + KR SGRT +SKAM VDEETR +VR+ARL+ALEADNYV ++ DE+ +D P +K+ K R A K IS R+ KS+A ++E D PNY+TAA KP++ P RHFC VCGY + Y C RCG R+C +C + HKET CLKF Sbjct: 3 SKNAKRQWDQTMASSGLALPQAPR---KRYSGRTVKISKAMKHVDEETRKQVRNARLDALEADNYVEPTDDGEDEDLYIEDDSGTP-SKKPLKSRAKAKSKGTVVPVSISGRRRIVRKVKSLAHLIFEECGTGEDTQRPNYITAAVKPAKTPPRHFCVVCGYPFRYSLHAACTSKTVLRSLTRRTLFSDYTCGRCGSRFCSVRCGDQHKETGCLKF 214
BLAST of NO06G00780 vs. NCBI_GenBank
Match: CCI42802.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 122.5 bits (306), Expect = 1.400e-24 Identity = 89/208 (42.79%), Postives = 110/208 (52.88%), Query Frame = 0 Query: 9 WDEAM-VQAGAAASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNY-------VGNVEEEPDEEYVDSEDGNRP--TAKREAKRRRNAAPK--------------------SGQASKLISSFRKKSVAQWVYEAGYNPSDGPNYLTAAAKPSRLPTRHFCSVCGYWGLYACTRCGMRYCCGKCAETHKETRCLKF 187 W+E + QA A A + KR SGRTT LSK M VDEETR VR+ARLE+LEADNY + + + DE Y+D + P + R +K+ R+ K +AS L S RK S Q S PNYLTAAAKPS P RHFC +CGY+ Y+CTRCG R+C KC + HK+T CLKF Sbjct: 11 WNETIAAQAFKNAPAAALSAQKRYSGRTTKLSKTMKHVDEETRAIVRNARLESLEADNYGIDEADCITDQADLKDELYIDEKVKAVPKNNSPRVSKKPRDKIEKLLKARYPAKRLAQLVFEEFGHSEASFLASLSRKSSADQSNERYKSIWSSAPNYLTAAAKPSTTPARHFCCICGYFASYSCTRCGSRFCRIKCGDQHKKTGCLKF 218
BLAST of NO06G00780 vs. NCBI_GenBank
Match: POM74018.1 (Ca2 :Cation Antiporter (CaCA) Family [Phytophthora palmivora var. palmivora] >POM79492.1 Ca2 :Cation Antiporter (CaCA) Family [Phytophthora palmivora var. palmivora]) HSP 1 Score: 122.1 bits (305), Expect = 1.900e-24 Identity = 83/196 (42.35%), Postives = 114/196 (58.16%), Query Frame = 0 Query: 6 RSAWDEAMVQAGAAASRAKKKSG------KRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNY-----VGNVEEEPDEEYVDSEDG--NRPTAKREAKRRRNAAPKSGQASKLISSFRKKSVAQWVYEAGYN--PSDGPNYLTAAAKPSRLPTRHFCSVCGYWGLYACTRCGMRYCCGKCAETHKETRCLKF 187 + W+E ++ A +RA SG KR SGRT LS AM +VD++TR EVR+ARL+ALEADN+ G+ ++ DE YVD E+G + + RE R++ + + K+ KS+AQ V+E N ++GPNYLTAAA P P R FC VCG++ Y C RCG RYC C + H E+ C+KF Sbjct: 8 KKRWNETIL---ATTARASTTSGRHTAVKKRLSGRTHKLSAAMRRVDDDTRNEVRNARLDALEADNFGEDADDGDGTQDGDEAYVDEEEGGVSATSGSREFLRKKRRVAVTNKKWKV------KSLAQLVFEELGNGENTEGPNYLTAAAGPPTRPARRFCCVCGFFANYNCRRCGSRYCSVGCGDQHNESGCMKF 194
BLAST of NO06G00780 vs. NCBI_GenBank
Match: XP_008876910.1 (hypothetical protein H310_11858 [Aphanomyces invadans] >ETV94595.1 hypothetical protein H310_11858 [Aphanomyces invadans]) HSP 1 Score: 121.7 bits (304), Expect = 2.400e-24 Identity = 74/195 (37.95%), Postives = 107/195 (54.87%), Query Frame = 0 Query: 2 SKRNRSAWDEAMVQAGAAASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNYVGNVEEEPDEEYVDSEDGNRPTAKREAKRRRNA------APKSGQASKLISSFRKKSVAQWVYEAGYNPSDGP----NYLTAAAKPSRLPTRHFCSVCGYWGLYACTRCGMRYCCGKCAETHKETRCLKF 187 +K + WD+ M +G A + KR SGRT +SK M VDEETR +VR+ARL+ALEADNY+ N ++ ++ +V ED + K P++ +++ KS+ ++E + + G NY+TAA KP + P RHFC VCG +Y+C RCG ++CC +C HKET CLKF Sbjct: 3 TKNAKRQWDQTMASSGVVAPGSGHVPRKRFSGRTMKISKTMKHVDEETRRQVRNARLDALEADNYMENTDDGDEDMFVLDEDDDAVAKKASXXXXXXXXXGTLHVPQAQGRHRVVRKI--KSLRHLIFEECGDVAPGNDSVINYVTAAVKPPKTPPRHFCCVCGLLSVYSCGRCGSKFCCVRCGNQHKETGCLKF 195
BLAST of NO06G00780 vs. NCBI_GenBank
Match: XP_024574732.1 (hypothetical protein, variant 1 [Plasmopara halstedii] >CEG38363.1 hypothetical protein, variant 1 [Plasmopara halstedii]) HSP 1 Score: 116.3 bits (290), Expect = 1.000e-22 Identity = 81/198 (40.91%), Postives = 109/198 (55.05%), Query Frame = 0 Query: 6 RSAWDEAMVQAGA---AASRAKKKSGKRTSGRTTVLSKAMGKVDEETRLEVRDARLEALEADNYVGNVE-----EEPDEEYVDSED-------GNRPTAKREAKRRRNAAPKSGQASKLISSFRKKSVAQWVYEAGYN--PSDGPNYLTAAAKPSRLPTRHFCSVCGYWGLYACTRCGMRYCCGKCAETHKETRCLKF 187 + W+E ++ A A + KR SGRT LS AM VD+ETR EVR ARL+ALEADN+ ++E ++ DE Y+D E+ G R T++ K RR P ++ KS+AQ V+E N ++ PNYLT AA PS P R FC VCG++ Y+C RCG +YC C HKE+ C+KF Sbjct: 1160 KKRWNETILATTARDSATGGRHAATKKRLSGRTHKLSVAMRHVDDETRNEVRSARLDALEADNFGEDIEDGVGTQDGDETYIDEEERDVKFISGGRETSR---KSRRTVIPGK-------KKWKVKSLAQLVFEELGNGENAEKPNYLTVAAGPSTFPARKFCCVCGFFANYSCRRCGSKYCSVGCENHHKESGCMKF 1347 The following BLAST results are available for this feature:
BLAST of NO06G00780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00780 ID=NO06G00780|Name=NO06G00780|organism=Nannochloropsis oceanica|type=gene|length=3033bpback to top protein sequence of NO06G00780.1 >NO06G00780.1-protein ID=NO06G00780.1-protein|Name=NO06G00780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=190bpback to top Synonyms
Publications
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