NO06G00770, NO06G00770 (gene) Nannochloropsis oceanica

Overview
NameNO06G00770
Unique NameNO06G00770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5322
Alignment locationchr6:266851..272172 +

Link to JBrowse

Properties
Property NameValue
DescriptionExpressed uncaracterized protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:266851..272172 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ
Homology
BLAST of NO06G00770 vs. NCBI_GenBank
Match: EWM26112.1 (expressed uncaracterized protein [Nannochloropsis gaditana])

HSP 1 Score: 1551.6 bits (4016), Expect = 0.000e+0
Identity = 923/1780 (51.85%), Postives = 1142/1780 (64.16%), Query Frame = 0
Query:   24 YPVPPVA-LVKDEELDALHQSPPPAPPPTLPHPCLVAYRDLLRPVPPEGGDSIRVEYTCVHVASEYLVCGSNTGVVDIYGHDGAGGECRLLKALVPPRGSQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQDAIRCLTWDDVGQRLYSGCDGGVIVESRLARQNDVVAN-LSNGESGIRGGSGGTPSVGGLLGSRQFGPLLTLFQTC-SSGVLHREVSELVQLTFYAVAGRLPADMQREGDIPADAILLATHARRCNVHLLNRSLAKSLLYSIQVEGGGTAASGRTIYGATLQAFMDSTGDNLEKLHLYVSRPRGKFWMVDLGSANTVKTLTPTLATVYSPDEPENEDEKSKYGVTAKQTASVADALCGRLMLAPFPAPARDCLISWTHMGGLSLVSLENGQAVSLWITGIHDLATFKGKGTVLMMVLLHGAEKTVGMLKVSLVPKGDAEEDGWTRQQAATVLQQAWRRSRVRRAEAMQEKVQMLLDEISTAVERARERETLLVNQPRQNEVCR-QETGPRAQAFWEEVESICAKALEFLERAPSTSAIGEGFSLGEDGIAVLDPSSLTLVNMVNKLLVESQRMLASPVQRIPPISPSIAGAFENQTREAVASVENEETIPVIYKRVGRRWRERQEGAMTADAESSRSVVVTVKEIEGEESVNVGSAISALAALEYEVRLVASSGLGLDLAFVGNGVVVRELAFLADGRPSPAQLCGRIRPGDALLAVNGIVLEPLALKDKLAALLALAGEHDTEISLRFTAKEASSWTRSLVSLGLGAADGAEDTGQKEEINPFLPMMGPITPSHLQQPRXXXXXXXXXXXXXXXXXXXXXXQEQLRVMEKMVELGLAAPNPGQSSGTDQLRQQQSVVQHFLTSTLLPWKTRFWEDGGKGGAGVFLGLGRTHAGMASCRKKWGEFGPSEMNLGLMLAPEEMKSDLDRIARDIWTVWTTEERASKSRFYDDNHRFAASLGQLQAAVES-----RLSLDE---HKRLMAEHRLGRAREGGRAFKGKHDRLLHFKDLVKTSVACSQA-ASTEWEMGGRSRADR-RRADSTDNSPSLLFLSEPTRLPPPPIPAYLEAVPLTDVLAELGDGTNAKMEGGEEESQDLDAAMEVLSRVLEATLGGMVGGA-EETEAMVFAGPLSVEGQPWPPIQLTHVTGMAVAVQQAHAILGSSETMLQGWLRCFQPLPPSQRHMIWESSASFLSQHINPEDAEMIHQHHLLTCELVTLYFQLHTVWPLLEKAIRRPECAESGSACGDVEGIEGFGDSGMGMEELRLRVSWGREAAEGEDVGDVFDAALGVLHTGSRRGPGRPTQWQEDEALIFLEEYGAYVMLEGIVKACLARGFKRALWFTLRDLGPQEERFQQAQKSLAEGLKAKSGNETGLIRQVKETECPLSLAVALLPEVVASSSFATPAMVAELHRAFFPDLRPWLVQDILAAREKGKEKLDSYGSNSFAAAALIISHNVDEAW-----WSCLRAVGFQGQEKVSEAARTSIPQQEEQWR--------VQRQSQPPLAPEAGISVRVLQTALRHRLKLLRRAVSAGDLMTRIQTHIWGTIASSCASSGLSFVPPSLLGIALLEIFVSGRQLSSTKATWLEENDNNXXXXQEHARR--LFSSMSSVNEAEEKLPCLVDPIEGQGGTGIILYPKKTYVCGVCQLPCWGYSVDAGLVTSR-RRRRDADSLEVEWRGRGQDWEDENDENRGVRGNRERGNTLLILFTCNHMYHSACLPEQACVLCLRENFSP 1773
            Y + P+A   K+ E DA           T PH CLV+YRD+LRPV P    +IR+EYTCVH++ +YLVCGSNTGVVD+Y HDGAGG CRL KAL+PP+GSQH NVKVTC+KLDPTQR+LAVGNILGAVNVL L+   G+ QR+LHSHVLHQ ++RCL WDD+GQRLYSGCDGG +VE  LARQ+    +    G+S   GG GG+P      G R  GPLL LFQ   SS VLH+E S+ VQL F AV G LP+ MQR GDIPAD ILLA+HARRCNVHLLNR+L++SLLYSIQVEGGGTA SG++IYGATLQ  MDS G  LEKL+LYV RPR +FW++DLGS N V+TL P L     P + +  D + K   +A+  A  A    GRL++  FP P   CL+SW+H GGL+L+SLE  Q V +W  G +DLA   G G VL + +L G EK VGML VSL P    +     R++AA +LQ+AWR    R+AE M+ K++ +L  +    ERAR   +L   Q    E      + P A     E E++CA   +FL RA   S    G S        LD +SL L+ M  +LL+ES+R+L SP       SP I+           +++ +    PV+Y  +G+RWRERQEG +  + ++S S +  V+E+EG    NVGSAISALAALEYEV+LVAS GLGLDLAFVGNGVVVR LAFLADGRPSPAQLCGRIR GDALLAVNGI LEPLALKDKL  LLALA E DTEI LRF AKEASSWTRSLV LGLG          KEE +P  P      PS L  P                       Q+Q R +EK++E+G+  P  G S+G DQLR QQS++QHFLTSTLLPWK++  E+             +  A   S +K+WGEF  S+M+LGL+LA EEM++DLDRIARD+ T+WTT +RA+ SRFYDD H F A L ++QA   +     ++SL+    H R+ A  R    R+  R + G    LL+FKDL++T+   SQ  A+   + G   RA +    +  ++S +L   S P   P  PI  YLEAVPLTDVLAEL DG    +E   +ESQDL+AAMEVL+ VLEATL  MVG A ++  A  F  P    G+PWPP+QLTHVTGMA+AVQQAHAIL SSETMLQ WLRCFQPLPPSQRHMIW+SS SFLSQHI+P+DAEMI QHHLLTCEL TLYFQ+HTVWPLLEK++   E                  D+  G EE+RL ++ G    +G   G  FDA+LG+LH GSRRG G PTQWQE+EAL FLEEYGAYVMLEG VKACLARGF+ ALW+ +R+LGPQE RFQQA+K+L + L A   +E  L+R V+ET  PLSLAVA+LPEVVAS SF TP +V ELHR FFP LRPWL+++ILAAR K K K+D Y  ++FA AAL+I+ NVDEAW      + L+A+   GQ+ V   A + +       R         +  + PP++ E G  V  LQ ALR RL+LLRRA+ AGDLMTRIQTHIW   ++S A +GL+ +PPSLLGIAL+E    G QLS+           +    +E  R    FS     + A+    C  +P+EGQGG GI+    + Y+CGVCQL C        +V SR  R R  +    E R    D E  + E     G+ +     ++ FTC H +HS CL E+ACV+CLR NF P
Sbjct:    5 YDLKPIAQKSKETEEDAQDHG-------TSPHSCLVSYRDVLRPVAPGDDSNIRIEYTCVHISYQYLVCGSNTGVVDVYRHDGAGGNCRLQKALIPPKGSQHVNVKVTCIKLDPTQRILAVGNILGAVNVLLLNFDGGQPQRLLHSHVLHQGSVRCLAWDDLGQRLYSGCDGGTVVEMLLARQDGPSEHGAGGGDSVAGGGRGGSP------GRRSLGPLLGLFQASPSSSVLHQEESDTVQLIFLAVTGPLPSGMQRAGDIPADGILLASHARRCNVHLLNRTLSRSLLYSIQVEGGGTATSGKSIYGATLQPLMDSRGQQLEKLYLYVGRPRDRFWVIDLGSENAVQTLAPLLVPTPLPADHDPADGEQKDAESAR-NAPPAGPFGGRLVMTRFPPPGGPCLLSWSHSGGLALISLERLQTVPIWGGGAYDLAVLPGSGAVLTLAVLRGREKAVGMLNVSLEPADGTDGRAAERREAAALLQRAWRSQHARQAEKMRLKMERVLGAVREVGERARTHLSLPSEQHASQEPSAVPGSDPGAAKLLGEAEALCADVRQFLARAAPASEAALGKS-------ALDSTSLKLMAMAEELLLESRRVL-SPRDEC-AASPRISEYNSGSVTALPSAMADLRETPVLYGGLGQRWRERQEGEIAGNGKASLSRIAGVEELEG-GGANVGSAISALAALEYEVQLVASGGLGLDLAFVGNGVVVRGLAFLADGRPSPAQLCGRIRAGDALLAVNGIALEPLALKDKLGVLLALAREEDTEILLRFMAKEASSWTRSLVGLGLGXXXXXXXXXAKEERSPSRP---GGEPSSLSFP--------------PSQAPAALMQDQERAIEKILEMGVTLPKHGLSNGADQLRHQQSLIQHFLTSTLLPWKSKIREEEKSRST------QQKCAIATSEKKRWGEFFRSDMSLGLVLAAEEMENDLDRIARDVRTLWTTMDRANDSRFYDDQH-FGALLSRVQALASNPPADLKMSLERCSAHARIKAGGR--TPRDIAREYLG----LLYFKDLLRTTTFHSQGKAAITSKKGIEYRAKKDEELEPKESSAALYEASMPESSPCSPIQVYLEAVPLTDVLAELSDGVRENIEQVGKESQDLEAAMEVLTHVLEATLAEMVGCAGDKVAAEDF--PFLAGGKPWPPVQLTHVTGMAIAVQQAHAILSSSETMLQEWLRCFQPLPPSQRHMIWDSSDSFLSQHIHPDDAEMIRQHHLLTCELATLYFQMHTVWPLLEKSVSTKEQRSEKD------------DNRDGTEEVRLDIAGGCAVLDG---GGRFDASLGILHVGSRRGEGMPTQWQEEEALAFLEEYGAYVMLEGAVKACLARGFELALWYLVRNLGPQEGRFQQAEKALVQRLTANKEDELALVRHVQETAFPLSLAVAILPEVVASPSFGTPTVVTELHRVFFPHLRPWLIRNILAARGKEKVKVDPYAGHTFATAALLITRNVDEAWRDYHTTAGLKAITATGQD-VGRTALSPLDDLISPMRCLSTTIAAAKEGNAPPISDE-GSGVPRLQAALRQRLELLRRAIVAGDLMTRIQTHIWDMGSASSAVAGLNVLPPSLLGIALVENGTRGPQLST-----------HTPSKEEGMREPPAFSVGIERDGAKTPSTCAWNPVEGQGGVGIVHDLAEEYLCGVCQLDCC-----REVVRSRPTRHRGHEHGTEEVRRLNGDAEGVSGEGCSGAGDGKS----IVFFTCGHAFHSLCLQEKACVVCLRGNFPP 1691          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: GAY04142.1 (Hypothetical protein PINS_011947, partial [Pythium insidiosum])

HSP 1 Score: 90.9 bits (224), Expect = 4.300e-14
Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = 0
Query:   76 RVEYTCVHVASEYLVCGSNTGVVDIYGHDGAGGEC-----------RLLKALVPPRGSQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQD-AIRCLTWDDVGQRLYSGCDGGVIVESRL 203
            +V +TCVH +  +LVCG+NTG V +Y    A  +             L+K + PP G  H  + V C+ + P Q+ L VG + G V  + L       +++  +H  HQ   + C  WD +G +LYS C+GG++V++ L
Sbjct:   34 KVRFTCVHASDNFLVCGTNTGTVYLYATSAARTDANDSARTFPAKYHLVKMISPPSG--HDRIGVACLSICPVQKRLVVGTMRGLVYGIQLVDYNKIGEKVEFTHDFHQGFPVTCFLWDKLGLKLYSACNGGMVVQTAL 170          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: CBN79836.1 (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 87.4 bits (215), Expect = 4.800e-13
Identity = 90/345 (26.09%), Postives = 130/345 (37.68%), Query Frame = 0
Query: 1103 PPPPIPA-------YLEAVPLTDVLAELGDGTNAKMEGGEEESQDLDAAMEVLS-RVLEATLGGMVG----GAEETEAMVFAGPLSVEGQPWPPIQLTHVTGMAVAVQQAHAILGSSETMLQGWLRCFQPLPPSQRHMIWESSASFLSQHINPEDAEMIHQHHLLTCELVTLYFQLHTVWPLLEKAIRRPECAESGSACGDVEGIEGFGDSGMGMEELRLRVSW--------------------------GREAAEGEDVGDVFDAALGVLHTGSRRGPGRPTQWQEDEALIFLEEYGAYVMLEGIVKACLARGFKRALWFTLRDLGPQEERFQQAQKSLAEGLK 1410
            PP P+PA        LE+V         G    A + G +    D D      S R L    GG  G      E  E  V AG +      WPP +LT   G+  A Q AHA+   +E ++Q W+RCF P+    R  +W   A      +N    E    H  L C L+TLY Q+H  WP L +    P+                     +G+  LRL  +W                                    G   +A  G +  G       P QW E++A+ F+++YGAY+  + +  A   R  + AL   LR L  Q E ++  ++ L + L+
Sbjct:  578 PPRPLPAAAYDLQTALESVQHFATQTLAGVVQAAAVRGSDLYDNDYDPLSGARSPRHLAG--GGRAGKGSAAKEAREGGVAAGLVEEWEAAWPPRELTAALGLVTARQMAHAMRCDTEPLIQIWMRCFTPVDAKHRTKLWGGLAP--PPSVNDRFLEAGRWHRQLVCGLLTLYAQVHMSWPFLARPKDDPD--------------------AVGLRSLRLETTWFGTQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSWDEAGGGAVGRG-------PLQWDEEKAVGFIQDYGAYLEGDAVAAAASCREMEWALDEVLR-LAEQCEDYKSKERVLHQLLR 890          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: XP_009831448.1 (hypothetical protein H257_07574 [Aphanomyces astaci] >ETV78729.1 hypothetical protein H257_07574 [Aphanomyces astaci])

HSP 1 Score: 84.3 bits (207), Expect = 4.000e-12
Identity = 98/428 (22.90%), Postives = 156/428 (36.45%), Query Frame = 0
Query:   71 GGDSIRVEYTCVHVASEYLVCGSNTGVVDIYGH--------DGAGGECRLLKALVPPRG-SQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQD-AIRCLTWDDVGQRLYSGCDGGVIVESRLARQNDVVANLSNGESGIRGGSGGTPSVGGLLGSRQFGPLLTLFQTCSSGVLHREVSELVQLTFYAVAGRLPADMQREGDIPADAILLATHARRCNVHLLNRSLAKSLLYSIQVEGGGTAASGRTIYGATLQAFMDSTGDNLEKLHLYVSRPRGKFWMVDLGSANTVKTL-----TPTLATVYSPDEPENEDEKSKYGVTAKQTASVADALCGRLMLAPFPAPARDCLISWTHMGGLSLVSLENGQAVSLW---ITGIHDLATFKGKGTVLMMVLLHGAEKTVGMLK 481
            GG      +TCV V + +L CG+  G V I+            +    RLLK + PP   S      VTC+   P QR L VG   GAV  +SL       +++  SH LH   ++  L WD+ G R++SGC GG +                  ++ IR G                  +  +F + S+  L +E + +VQL  +                         H+      LL  S  + L+ ++  +GG      +   G     F     D  +++ +Y SRP  + W+ D  S     TL      P     + P+    +D      V+AK       +L   +  +    P    LISW       ++    G  +  W   +  IHDL          + V+LHG    + +++
Sbjct:   31 GGAHTAKRFTCVDVCARFLACGATNGSVYIFARSQKKQGNTSSSSVTFRLLKMISPPSATSDRHQDPVTCLSFCPVQRYLVVGTSRGAVYAISLLDPARIGEKIEFSHPLHHGFSVSALLWDEPGARVFSGCTGGTV-----------------AQTSIRAG------------------VSAIFGSSSTEFLLKEDTSIVQLDIH-------------------------HSNATGDLLLVSSQTRVLVLNLSTDGGIVQVGTKLRQGNFGGCFFVDPDD--KQVKVYSSRPGKRVWVADPASGTVSSTLRFSMSVPPTPFFHGPNVAPADD------VSAKNVTLSHVSLFKYIHESMDFTPDLPQLISWAPNSSALVLLDPIGVELVEWHVDLGVIHDLKVLDAS----VFVVLHGDPGKIAIVR 386          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: XP_009831449.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV78730.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 84.3 bits (207), Expect = 4.000e-12
Identity = 98/428 (22.90%), Postives = 156/428 (36.45%), Query Frame = 0
Query:   71 GGDSIRVEYTCVHVASEYLVCGSNTGVVDIYGH--------DGAGGECRLLKALVPPRG-SQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQD-AIRCLTWDDVGQRLYSGCDGGVIVESRLARQNDVVANLSNGESGIRGGSGGTPSVGGLLGSRQFGPLLTLFQTCSSGVLHREVSELVQLTFYAVAGRLPADMQREGDIPADAILLATHARRCNVHLLNRSLAKSLLYSIQVEGGGTAASGRTIYGATLQAFMDSTGDNLEKLHLYVSRPRGKFWMVDLGSANTVKTL-----TPTLATVYSPDEPENEDEKSKYGVTAKQTASVADALCGRLMLAPFPAPARDCLISWTHMGGLSLVSLENGQAVSLW---ITGIHDLATFKGKGTVLMMVLLHGAEKTVGMLK 481
            GG      +TCV V + +L CG+  G V I+            +    RLLK + PP   S      VTC+   P QR L VG   GAV  +SL       +++  SH LH   ++  L WD+ G R++SGC GG +                  ++ IR G                  +  +F + S+  L +E + +VQL  +                         H+      LL  S  + L+ ++  +GG      +   G     F     D  +++ +Y SRP  + W+ D  S     TL      P     + P+    +D      V+AK       +L   +  +    P    LISW       ++    G  +  W   +  IHDL          + V+LHG    + +++
Sbjct:   31 GGAHTAKRFTCVDVCARFLACGATNGSVYIFARSQKKQGNTSSSSVTFRLLKMISPPSATSDRHQDPVTCLSFCPVQRYLVVGTSRGAVYAISLLDPARIGEKIEFSHPLHHGFSVSALLWDEPGARVFSGCTGGTV-----------------AQTSIRAG------------------VSAIFGSSSTEFLLKEDTSIVQLDIH-------------------------HSNATGDLLLVSSQTRVLVLNLSTDGGIVQVGTKLRQGNFGGCFFVDPDD--KQVKVYSSRPGKRVWVADPASGTVSSTLRFSMSVPPTPFFHGPNVAPADD------VSAKNVTLSHVSLFKYIHESMDFTPDLPQLISWAPNSSALVLLDPIGVELVEWHVDLGVIHDLKVLDAS----VFVVLHGDPGKIAIVR 386          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: OWZ13846.1 (hypothetical protein PHMEG_00012769 [Phytophthora megakarya])

HSP 1 Score: 84.3 bits (207), Expect = 4.000e-12
Identity = 44/140 (31.43%), Postives = 70/140 (50.00%), Query Frame = 0
Query:   71 GGDSIRVEYTCVHVASEYLVCGSNTGVVDIYG-------HDGAGGECRLLKALVPPRGSQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQD-AIRCLTWDDVGQRLYSGCDGGVIVESRL 203
            G  + +V +TCVH +  +L CG+N G V +Y         D A  +  L+K + PP    +  V VTC+ + P Q+ L VG + G V  + L       +++  SH  H    + C  WD  G RL+S C+ G++ ++ L
Sbjct:   26 GTQNRKVRFTCVHASENFLACGANNGSVYLYATSPSRSEGDRASAKYHLVKMISPP---SNDRVAVTCLSICPMQKRLVVGTMRGVVYAIQLSDYHKIGEKVEFSHDFHAGFPVTCFLWDKRGARLFSACNAGLVCQTVL 162          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: XP_008878232.1 (hypothetical protein H310_12808 [Aphanomyces invadans] >ETV93210.1 hypothetical protein H310_12808 [Aphanomyces invadans])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-11
Identity = 47/142 (33.10%), Postives = 68/142 (47.89%), Query Frame = 0
Query:   71 GGDSIRVEYTCVHVASEYLVCGSNTGVVDIYGHD--------GAGGECRLLKALVPPRG-SQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQD-AIRCLTWDDVGQRLYSGCDGGVIVESRL 203
            GG      +TCV V + +L CG+  G V I+            +    RLLK + PP   S      +TC+   P QR L VG   GAV  +SL       +++  SH LH   ++  L WD+ G RL+SGC GG + ++ +
Sbjct:   28 GGAHTAKRFTCVDVCARFLACGATNGSVYIFARSQKKQGTNASSSVTFRLLKMISPPSATSDRHQDPITCLSFCPAQRYLVVGTSRGAVYAISLLDPARIGEKIEFSHPLHHGFSVSALLWDEPGARLFSGCCGGTVAQTTI 169          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: ETM52042.1 (hypothetical protein L914_04230 [Phytophthora parasitica] >ETM52043.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM52044.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM52045.1 hypothetical protein, variant 3 [Phytophthora parasitica])

HSP 1 Score: 80.9 bits (198), Expect = 4.500e-11
Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 0
Query:   47 APPPTLPHPCLVAYRDLLRPVPPEGGDSIRVEYTCVHVASEYLVCGSNTGVVDIYG--------HDGAGGECRLLKALVPPRGSQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQD-AIRCLTWDDVGQRLYSGCDGGVIVESRL 203
            A  P    P L+ Y+DL       G  + +V +TCVH +  ++ CG+N G V +Y          D    +  L+K + PP    +  V VTC+ + P Q+ L VG + G V  + L       +++  SH  H    + C  WD  G RL+S C+ G++ ++ L
Sbjct:    9 AATPVRSRP-LLHYKDL-----GLGTQNRKVRFTCVHASENFIACGANNGSVYLYATSALGRSESDRVSAKYHLVKTISPP---SNDRVAVTCLSICPLQKRLVVGTMRGVVYAIQLSDYHKIGEKVEFSHDFHAGFPVTCFLWDKRGTRLFSACNAGLVCQTVL 164          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: ETM52046.1 (hypothetical protein, variant 4 [Phytophthora parasitica] >ETM52047.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETM52048.1 hypothetical protein, variant 6 [Phytophthora parasitica] >ETM52049.1 hypothetical protein, variant 7 [Phytophthora parasitica])

HSP 1 Score: 80.9 bits (198), Expect = 4.500e-11
Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 0
Query:   47 APPPTLPHPCLVAYRDLLRPVPPEGGDSIRVEYTCVHVASEYLVCGSNTGVVDIYG--------HDGAGGECRLLKALVPPRGSQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQD-AIRCLTWDDVGQRLYSGCDGGVIVESRL 203
            A  P    P L+ Y+DL       G  + +V +TCVH +  ++ CG+N G V +Y          D    +  L+K + PP    +  V VTC+ + P Q+ L VG + G V  + L       +++  SH  H    + C  WD  G RL+S C+ G++ ++ L
Sbjct:    9 AATPVRSRP-LLHYKDL-----GLGTQNRKVRFTCVHASENFIACGANNGSVYLYATSALGRSESDRVSAKYHLVKTISPP---SNDRVAVTCLSICPLQKRLVVGTMRGVVYAIQLSDYHKIGEKVEFSHDFHAGFPVTCFLWDKRGTRLFSACNAGLVCQTVL 164          
BLAST of NO06G00770 vs. NCBI_GenBank
Match: XP_009522508.1 (hypothetical protein PHYSODRAFT_359810 [Phytophthora sojae] >EGZ19791.1 hypothetical protein PHYSODRAFT_359810 [Phytophthora sojae])

HSP 1 Score: 80.5 bits (197), Expect = 5.800e-11
Identity = 47/155 (30.32%), Postives = 74/155 (47.74%), Query Frame = 0
Query:   57 LVAYRDLLRPVPPEGGDSIRVEYTCVHVASEYLVCGSNTGVVDIYG--------HDGAGGECRLLKALVPPRGSQHTNVKVTCVKLDPTQRLLAVGNILGAVNVLSLDLTEGRAQRMLHSHVLHQD-AIRCLTWDDVGQRLYSGCDGGVIVESRL 203
            L+ Y+DL       G  + +V +TCVH +  +L CG+N G V +Y          D    +  L+K + PP    +  V VT + + P Q+ L VG + G V  + L       +++  SH  H    I C  WD  G RL+S C+ G++ ++ L
Sbjct:   16 LLHYKDL-----GLGTQNRKVRFTCVHASENFLACGANNGSVYLYATSALSRGEGDSRAAKYHLVKMISPP---SNDRVAVTSLSICPLQKRLVVGTMRGVVYAIQLSDYHKIGEKVEFSHDFHAGFPITCFLWDKRGTRLFSACNAGLVCQTVL 162          
The following BLAST results are available for this feature:
BLAST of NO06G00770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26112.10.000e+051.85expressed uncaracterized protein [Nannochloropsis ... [more]
GAY04142.14.300e-1433.09Hypothetical protein PINS_011947, partial [Pythium... [more]
CBN79836.14.800e-1326.09expressed unknown protein [Ectocarpus siliculosus][more]
XP_009831448.14.000e-1222.90hypothetical protein H257_07574 [Aphanomyces astac... [more]
XP_009831449.14.000e-1222.90hypothetical protein, variant [Aphanomyces astaci]... [more]
OWZ13846.14.000e-1231.43hypothetical protein PHMEG_00012769 [Phytophthora ... [more]
XP_008878232.11.500e-1133.10hypothetical protein H310_12808 [Aphanomyces invad... [more]
ETM52042.14.500e-1129.70hypothetical protein L914_04230 [Phytophthora para... [more]
ETM52046.14.500e-1129.70hypothetical protein, variant 4 [Phytophthora para... [more]
XP_009522508.15.800e-1130.32hypothetical protein PHYSODRAFT_359810 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000374NSK000374Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00770.1NO06G00770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100014g47gene4408Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00770.1NO06G00770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00770 ID=NO06G00770|Name=NO06G00770|organism=Nannochloropsis oceanica|type=gene|length=5322bp
ATGGCCAAGACTCTGATGCCATTTCCCTTTCGAGGGAAGGAGGCAGGACG
TGCACTAACACACTTGCTGTACCCTGTCCCGCCCGTGGCGCTCGTGAAGG
ATGAGGAACTGGACGCTCTGCACCAAAGCCCACCTCCCGCGCCTCCCCCA
ACGCTTCCGCACCCTTGCCTTGTAGCCTACCGCGATTTACTGCGGCCTGT
GCCTCCAGAAGGCGGCGACAGCATTCGTGTCGAGTATACATGTGTGCATG
TAGCCAGTGAGTATCTGGTCTGCGGCTCCAACACGGGAGTTGTGGACATA
TACGGGCACGACGGGGCAGGCGGGGAATGCCGGCTTTTAAAAGCTTTGGT
GCCGCCCAGGGGGAGTCAGCATACCAACGTCAAGGTTACCTGCGTCAAGC
TGGACCCCACCCAGCGGTTACTAGCGGTCGGCAATATTTTGGGTGCTGTG
AACGTACTGTCACTAGACTTAACTGAAGGGCGCGCACAACGAATGCTTCA
CAGCCACGTCCTTCACCAAGACGCAATTCGGTGCCTGACCTGGGACGACG
TAGGCCAGCGGTTGTACTCGGGCTGCGATGGCGGGGTTATCGTTGAGTCA
CGTTTGGCGAGGCAGAATGATGTCGTCGCAAACTTGTCAAATGGAGAAAG
TGGAATTAGAGGCGGTAGCGGAGGGACACCTTCGGTTGGAGGACTGTTGG
GCAGCCGGCAGTTCGGACCATTGCTGACCCTTTTTCAGACCTGTTCGAGT
GGCGTCTTGCACCGAGAGGTTTCAGAACTGGTGCAATTGACATTCTATGC
GGTAGCGGGGCGGTTGCCTGCGGACATGCAGCGTGAGGGCGACATCCCGG
CCGATGCCATCTTGCTCGCCACGCACGCCCGACGCTGCAACGTGCACCTT
TTAAACCGCAGCTTGGCCAAGAGCCTGCTCTATTCCATCCAGGTAGAGGG
GGGTGGTACAGCAGCCTCAGGCCGGACTATATACGGAGCGACGCTGCAGG
CTTTCATGGACAGCACTGGAGACAATCTGGAGAAGCTGCACCTATATGTC
TCGCGCCCCCGTGGGAAGTTTTGGATGGTGGACCTTGGGTCGGCCAACAC
TGTGAAGACGCTCACCCCAACCCTAGCAACTGTCTACTCGCCGGACGAGC
CAGAGAATGAAGATGAGAAGTCGAAATATGGAGTGACGGCCAAACAGACC
GCGTCTGTGGCCGATGCGTTGTGCGGGCGGCTAATGTTGGCCCCTTTCCC
AGCACCAGCGAGGGATTGCCTCATCAGCTGGACGCATATGGGTGGTCTGT
CCCTTGTCTCCTTGGAAAATGGCCAAGCCGTCTCGTTGTGGATCACAGGC
ATCCACGATCTCGCCACTTTTAAAGGGAAGGGGACGGTGCTGATGATGGT
GCTCCTGCACGGCGCGGAAAAGACAGTGGGCATGCTGAAAGTGAGCCTGG
TGCCAAAGGGCGATGCGGAGGAAGACGGGTGGACGCGGCAGCAGGCTGCC
ACTGTGCTGCAGCAGGCCTGGCGGCGATCCCGGGTCCGTCGAGCTGAAGC
CATGCAGGAAAAGGTGCAAATGCTGCTGGATGAGATTTCGACCGCCGTGG
AACGGGCCCGCGAGCGGGAAACTTTGCTCGTGAACCAGCCGAGGCAGAAC
GAAGTCTGCCGTCAGGAGACTGGCCCGCGAGCTCAGGCATTTTGGGAGGA
GGTGGAGTCGATTTGCGCGAAAGCCTTGGAGTTTCTTGAGAGGGCACCAT
CGACGTCAGCGATAGGAGAGGGGTTTTCTTTAGGGGAAGATGGGATTGCC
GTGTTGGACCCGTCGTCCTTGACACTGGTGAATATGGTTAACAAGCTTTT
GGTCGAAAGTCAACGCATGCTGGCCTCGCCCGTTCAACGCATCCCACCGA
TATCGCCGTCAATCGCTGGCGCTTTTGAAAACCAAACCAGAGAAGCGGTG
GCAAGTGTAGAAAATGAGGAGACCATACCTGTGATCTACAAGCGAGTGGG
CAGGAGATGGAGAGAGCGTCAGGAGGGAGCTATGACAGCAGACGCAGAGT
CTTCACGCTCAGTGGTCGTGACAGTGAAGGAGATCGAAGGGGAAGAGTCC
GTCAACGTGGGGTCGGCTATCTCGGCCCTGGCGGCCTTGGAGTACGAGGT
CCGGCTGGTGGCGAGCAGCGGGCTCGGGTTGGACTTGGCCTTCGTGGGGA
ACGGCGTGGTCGTGCGGGAGCTAGCATTTCTGGCGGATGGACGACCCAGC
CCCGCCCAGCTTTGCGGTCGAATCAGACCAGGAGATGCGCTGCTGGCGGT
TAACGGTATTGTCCTGGAGCCTCTGGCGCTCAAAGACAAACTTGCCGCGC
TCCTGGCCTTGGCCGGCGAGCACGACACAGAGATTTCCCTCCGTTTTACG
GCCAAGGAGGCATCCAGCTGGACTCGTTCGTTGGTCAGCCTAGGTCTGGG
GGCAGCGGACGGAGCCGAGGACACGGGTCAGAAAGAGGAGATTAATCCCT
TTCTGCCCATGATGGGGCCGATTACTCCCTCGCACCTCCAGCAACCCCGA
CCGCCTTCCCCATCACTTTCTGTGACTCCTGCTCCCCCTTCATCGTTCTC
GACAGCAACATCTTCACAGGAGCAGCTGCGAGTTATGGAGAAGATGGTGG
AGCTGGGTTTAGCGGCGCCTAACCCAGGGCAGAGTTCTGGGACTGATCAG
CTTCGTCAACAGCAGTCTGTCGTGCAGCACTTTTTGACCTCGACTCTTCT
CCCGTGGAAGACACGATTCTGGGAAGACGGTGGTAAAGGCGGAGCCGGGG
TTTTTTTGGGACTGGGGCGCACCCATGCCGGCATGGCGTCGTGTCGGAAG
AAGTGGGGCGAGTTTGGGCCGTCAGAAATGAACTTGGGGCTGATGTTGGC
ACCGGAGGAGATGAAGAGCGACCTTGATCGTATTGCTCGGGATATCTGGA
CTGTGTGGACGACAGAAGAGCGAGCTAGCAAATCGCGCTTTTATGATGAC
AATCATCGTTTCGCAGCATCGCTAGGTCAATTGCAGGCTGCAGTGGAGTC
GCGTCTTTCCCTTGATGAGCATAAGAGGCTTATGGCTGAGCACCGATTAG
GCCGGGCAAGGGAGGGTGGTAGAGCGTTCAAAGGAAAGCATGATCGTCTC
CTTCATTTCAAGGATTTGGTCAAGACTTCAGTCGCTTGCAGCCAAGCCGC
TTCTACTGAATGGGAGATGGGGGGCAGAAGTCGAGCGGACCGTCGACGCG
CCGACTCCACTGACAACTCTCCCTCCTTACTTTTTCTCTCGGAACCCACG
CGCCTGCCACCTCCGCCAATTCCAGCTTATTTGGAAGCTGTGCCTTTAAC
GGATGTTCTGGCAGAGCTAGGCGACGGGACCAACGCGAAGATGGAAGGAG
GAGAGGAGGAATCGCAGGATTTGGACGCTGCCATGGAGGTCTTGTCTCGA
GTGCTGGAAGCCACCCTTGGGGGAATGGTGGGAGGGGCGGAGGAGACAGA
GGCCATGGTATTTGCGGGACCGCTTTCCGTTGAAGGGCAACCGTGGCCGC
CTATTCAACTGACGCATGTGACTGGAATGGCGGTGGCGGTGCAGCAGGCG
CATGCCATCTTGGGCTCCTCCGAGACCATGTTGCAGGGGTGGCTACGGTG
CTTCCAGCCCTTGCCGCCCTCACAACGGCACATGATTTGGGAGAGCAGTG
CCTCGTTTCTGAGCCAACACATCAATCCGGAGGATGCTGAAATGATCCAC
CAGCACCATCTCCTAACCTGTGAGCTCGTCACGCTCTACTTCCAGTTGCA
CACTGTCTGGCCCCTGCTCGAGAAAGCAATCCGCAGGCCGGAGTGTGCGG
AAAGCGGCAGTGCATGTGGGGACGTGGAAGGCATAGAAGGTTTTGGTGAT
AGTGGCATGGGTATGGAGGAGTTAAGGCTTCGCGTTTCTTGGGGCCGGGA
GGCAGCTGAGGGAGAGGACGTGGGCGATGTTTTTGACGCCGCTTTGGGCG
TGCTGCACACGGGTTCGAGGCGAGGCCCGGGGCGACCCACTCAATGGCAG
GAGGACGAAGCGCTGATATTTCTGGAGGAGTATGGGGCCTATGTGATGTT
GGAGGGGATCGTCAAGGCTTGCCTCGCGAGAGGTTTCAAGCGTGCGCTCT
GGTTCACGTTGCGCGACCTGGGCCCGCAGGAAGAGCGCTTTCAGCAGGCG
CAGAAATCATTGGCGGAAGGGCTCAAGGCCAAATCGGGAAATGAGACTGG
GTTAATTCGACAAGTGAAGGAGACGGAGTGCCCCTTGTCTCTGGCGGTGG
CCCTTTTGCCTGAGGTGGTGGCCTCGTCTTCTTTTGCTACCCCCGCCATG
GTGGCCGAGCTACATCGGGCATTCTTTCCCGACCTGCGGCCATGGCTCGT
CCAGGACATCCTAGCCGCGCGCGAGAAAGGGAAGGAAAAGCTGGATTCCT
ATGGCAGCAATTCTTTCGCAGCGGCCGCTCTCATCATCTCCCATAATGTG
GACGAGGCGTGGTGGTCATGTCTTCGGGCGGTGGGCTTTCAAGGACAGGA
GAAGGTCAGTGAGGCAGCCAGGACCAGCATCCCCCAGCAAGAAGAGCAGT
GGCGAGTGCAGCGGCAGTCACAACCACCACTAGCTCCTGAGGCTGGGATT
AGTGTGCGGGTCTTGCAAACGGCGCTTCGGCATCGCCTGAAACTACTCCG
GCGCGCGGTGTCTGCTGGAGATCTGATGACGCGGATTCAGACGCATATAT
GGGGCACCATAGCCTCCTCCTGTGCTTCGTCAGGCCTGAGCTTCGTGCCA
CCCTCACTGCTGGGCATCGCACTCCTGGAAATTTTCGTCAGTGGACGACA
GCTGTCGTCGACTAAAGCCACATGGCTGGAGGAGAACGACAACAATGAGG
AGGAAAATCAGGAGCACGCGCGTCGTCTATTTTCTTCAATGTCATCGGTA
AATGAGGCGGAGGAGAAGTTGCCCTGCTTGGTAGACCCCATTGAAGGCCA
AGGTGGCACTGGCATAATCCTCTATCCCAAGAAAACGTATGTGTGCGGTG
TCTGCCAGCTGCCCTGTTGGGGCTACAGCGTGGATGCTGGCCTTGTGACA
AGTCGGCGCCGCCGACGCGATGCAGACAGTTTGGAGGTGGAATGGCGAGG
GAGGGGTCAAGATTGGGAGGACGAGAACGACGAGAATCGAGGAGTGCGAG
GAAACAGGGAGAGGGGGAATACGCTTCTCATTTTGTTCACATGTAATCAT
ATGTACCACAGCGCATGCCTTCCCGAGCAGGCATGTGTGCTATGTCTGCG
GGAGAATTTCTCCCCTTTTTGA
back to top

protein sequence of NO06G00770.1

>NO06G00770.1-protein ID=NO06G00770.1-protein|Name=NO06G00770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1774bp
MAKTLMPFPFRGKEAGRALTHLLYPVPPVALVKDEELDALHQSPPPAPPP
TLPHPCLVAYRDLLRPVPPEGGDSIRVEYTCVHVASEYLVCGSNTGVVDI
YGHDGAGGECRLLKALVPPRGSQHTNVKVTCVKLDPTQRLLAVGNILGAV
NVLSLDLTEGRAQRMLHSHVLHQDAIRCLTWDDVGQRLYSGCDGGVIVES
RLARQNDVVANLSNGESGIRGGSGGTPSVGGLLGSRQFGPLLTLFQTCSS
GVLHREVSELVQLTFYAVAGRLPADMQREGDIPADAILLATHARRCNVHL
LNRSLAKSLLYSIQVEGGGTAASGRTIYGATLQAFMDSTGDNLEKLHLYV
SRPRGKFWMVDLGSANTVKTLTPTLATVYSPDEPENEDEKSKYGVTAKQT
ASVADALCGRLMLAPFPAPARDCLISWTHMGGLSLVSLENGQAVSLWITG
IHDLATFKGKGTVLMMVLLHGAEKTVGMLKVSLVPKGDAEEDGWTRQQAA
TVLQQAWRRSRVRRAEAMQEKVQMLLDEISTAVERARERETLLVNQPRQN
EVCRQETGPRAQAFWEEVESICAKALEFLERAPSTSAIGEGFSLGEDGIA
VLDPSSLTLVNMVNKLLVESQRMLASPVQRIPPISPSIAGAFENQTREAV
ASVENEETIPVIYKRVGRRWRERQEGAMTADAESSRSVVVTVKEIEGEES
VNVGSAISALAALEYEVRLVASSGLGLDLAFVGNGVVVRELAFLADGRPS
PAQLCGRIRPGDALLAVNGIVLEPLALKDKLAALLALAGEHDTEISLRFT
AKEASSWTRSLVSLGLGAADGAEDTGQKEEINPFLPMMGPITPSHLQQPR
PPSPSLSVTPAPPSSFSTATSSQEQLRVMEKMVELGLAAPNPGQSSGTDQ
LRQQQSVVQHFLTSTLLPWKTRFWEDGGKGGAGVFLGLGRTHAGMASCRK
KWGEFGPSEMNLGLMLAPEEMKSDLDRIARDIWTVWTTEERASKSRFYDD
NHRFAASLGQLQAAVESRLSLDEHKRLMAEHRLGRAREGGRAFKGKHDRL
LHFKDLVKTSVACSQAASTEWEMGGRSRADRRRADSTDNSPSLLFLSEPT
RLPPPPIPAYLEAVPLTDVLAELGDGTNAKMEGGEEESQDLDAAMEVLSR
VLEATLGGMVGGAEETEAMVFAGPLSVEGQPWPPIQLTHVTGMAVAVQQA
HAILGSSETMLQGWLRCFQPLPPSQRHMIWESSASFLSQHINPEDAEMIH
QHHLLTCELVTLYFQLHTVWPLLEKAIRRPECAESGSACGDVEGIEGFGD
SGMGMEELRLRVSWGREAAEGEDVGDVFDAALGVLHTGSRRGPGRPTQWQ
EDEALIFLEEYGAYVMLEGIVKACLARGFKRALWFTLRDLGPQEERFQQA
QKSLAEGLKAKSGNETGLIRQVKETECPLSLAVALLPEVVASSSFATPAM
VAELHRAFFPDLRPWLVQDILAAREKGKEKLDSYGSNSFAAAALIISHNV
DEAWWSCLRAVGFQGQEKVSEAARTSIPQQEEQWRVQRQSQPPLAPEAGI
SVRVLQTALRHRLKLLRRAVSAGDLMTRIQTHIWGTIASSCASSGLSFVP
PSLLGIALLEIFVSGRQLSSTKATWLEENDNNEEENQEHARRLFSSMSSV
NEAEEKLPCLVDPIEGQGGTGIILYPKKTYVCGVCQLPCWGYSVDAGLVT
SRRRRRDADSLEVEWRGRGQDWEDENDENRGVRGNRERGNTLLILFTCNH
MYHSACLPEQACVLCLRENFSPF*
back to top
Synonyms
Publications