NO06G00560, NO06G00560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00560 vs. NCBI_GenBank
Match: EWM26078.1 (abc transporter atp-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 937.9 bits (2423), Expect = 1.500e-269 Identity = 472/591 (79.86%), Postives = 519/591 (87.82%), Query Frame = 0 Query: 1 MPPGPLLCLGRRLSARLTTIRHRLLYHPLSNAAASTASSSSTPSTGEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIRQRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRISGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEYVTYRAQQAKAKWKE 592 MPP RL+ ++HR + L + ++ S+ PSTGEIICSL+DVTKVLPGGRVLL+DTRLSF RGAKIGVLGVNGSGKSSLLK+ISGVD EHHG VWRKP +KFMYL QEPQLDPALDV+GNVRLGIAEQEAL+++FD IA KMGE DAD D LLEEQAELQ RIEALDCWN+EHRVDTVMKALHLPPPDAS+ SLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSV WLERFLQ+YRGT+IAVTHDRYFLDNIA WVLEVDRGSL+PF+GNYTQWL HKAARLD+ERGKEAAQARALQ EL+WIR RS Q SKARVK+ E R+ EQ+GLA+KI QLETGKI+IPPGPRLGDRVM+V+ LSKR+S KVLF++VSF LE GAIVGVIGANGCGKSTLFNVLCGR E DAGSV+IGSTV LGLVSQ+RD+ELDD K+VYEEVAQSEDVI + RTVHTRAYLAAFNLKG MQEK+VG LSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDV TLRALEEALR+F GC+VVISHDRWFLDRVCTHTLAFE G+V MF GNY EYV +RAQ+ + K +E Sbjct: 1 MPPILQRLAKLRLALPRLGLQHR---YRLYSCQGGGSNPSNAPSTGEIICSLSDVTKVLPGGRVLLKDTRLSFFRGAKIGVLGVNGSGKSSLLKIISGVDQEHHGVVWRKPDVKFMYLAQEPQLDPALDVKGNVRLGIAEQEALVQKFDEIAMKMGETDADLDKLLEEQAELQGRIEALDCWNVEHRVDTVMKALHLPPPDASIISLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVAWLERFLQEYRGTVIAVTHDRYFLDNIARWVLEVDRGSLLPFQGNYTQWLEHKAARLDLERGKEAAQARALQAELEWIRLRSKQASKARVKAVEVRRIEQQGLADKIHQLETGKIVIPPGPRLGDRVMTVENLSKRVSSKVLFDNVSFDLEAGAIVGVIGANGCGKSTLFNVLCGRAEPDAGSVQIGSTVSLGLVSQVRDQELDDRKSVYEEVAQSEDVIVLEGRTVHTRAYLAAFNLKGSMQEKLVGSLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVQTLRALEEALREFPGCSVVISHDRWFLDRVCTHTLAFEGAGSVKMFAGNYTEYVAHRAQRGRKKGQE 588
BLAST of NO06G00560 vs. NCBI_GenBank
Match: CBJ26334.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 630.2 bits (1624), Expect = 6.600e-177 Identity = 309/534 (57.87%), Postives = 396/534 (74.16%), Query Frame = 0 Query: 55 VTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIRQRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRISGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEE-----------KGNVCMFPGNYNEY 578 V+K LPGGR L D L+F+RGAKIGVLGVNGSGKS++LK+I+G D E G +W + GL+ YL QEP LD +L+V N+R GIAEQE ++ F+ MG+PDAD D LLEEQA LQ++IE D WNL+HRVD M+ L +PP D+ V LSGGE+RRVALCR+LLEQPDV+LLDEPTNHLDA+SV WLE +L+ ++GT+I++THDRYFLDN+A W+LEVDRGSL+PFKGNY+ WLV K RLD E K+A A+ L+ EL+WIR VSKAR E E+K A K+QQL GKI+IPPGPRLG ++V+ LSK+ + LF V+F ++PG++VGV+G NG GK+TLFN++ G EAD G+VE G K+GLVSQ R LD K+ EE+++ D I +GDR V+ RAY AAFNL+G Q+K+VG +SGGERNRVHLAKV+K+ HN+L LDEP+NDLDV TLR+LEEA+ F+G +++SHDRWFLDRVC+HT+AFE+ + V +F GN+ EY Sbjct: 4 VSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMENIRRGIAEQENMVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFKGNYSAWLVQKQNRLDREHSKQAQVAKRLESELEWIRTGRASVSKARANKYEKAVAERKEGAAKLQQLSEGKIVIPPGPRLGRSGLTVKDLSKKYGDRTLFSGVNFTVDPGSVVGVVGPNGSGKTTLFNLIAGVEEADGGTVEWGRLAKVGLVSQGR-SGLDPDKSAIEEISEGGDTIQIGDRQVNVRAYTAAFNLRGASQDKLVGTMSGGERNRVHLAKVLKQGHNVLLLDEPTNDLDVDTLRSLEEAINGFAGSVLIVSHDRWFLDRVCSHTIAFEDXXXXXXXXXKGESRVVVFQGNHGEY 536
BLAST of NO06G00560 vs. NCBI_GenBank
Match: XP_009532959.1 (ABC transporter ABCF family [Phytophthora sojae] >EGZ12626.1 ABC transporter ABCF family [Phytophthora sojae]) HSP 1 Score: 607.1 bits (1564), Expect = 6.000e-170 Identity = 306/557 (54.94%), Postives = 401/557 (71.99%), Query Frame = 0 Query: 30 SNAAASTASSSSTPSTGEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIR--QRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRI-SGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEYVTYRAQ 584 S AA S S++ G+ +C L DV +PGG+ L + L FLRGAKIGVLG NGSGKS+LLKVI+GV ++ G+ W K G K YL QEPQLDP+ +V N+ G+ E + L+ +FD ++ MGEPDADFD LLEEQA+LQ +IE L CW+L H V+ M AL +P DA V LSGGERRRVALCR+LLE+PD+LLLDEPTNHLDA+SV WLE FLQ YRGT++++THDRYFLDN+A WVLE+DRG ++GNYT+WL + RL+M+R +A +A+ + E+ W R Q S + +KAR+K + ++ E G ++E G+I++P G RLG++V+ V L K++ G+VLF+ +SF + P AIVG++G NG GKSTLFN++ G E D G VE+G TV LG VSQ RD EL +TVYEE++ + + +G ++TRAY+A+FNL+G MQEK VG LSGGERNRVHLAK++ HN++ LDEP+NDLDV TLR+LE AL DF G ++VISHDRWFLDR+C+H +AFE G+V F GNY EY R Q Sbjct: 38 SFAAPSGGSNAGGGVPGDFVCHLRDVGVTIPGGKKLFERVSLGFLRGAKIGVLGPNGSGKSTLLKVIAGVRSDFDGERWVKDGFKVGYLPQEPQLDPSKNVYENIMDGLRESQTLLAKFDEVSMAMGEPDADFDALLEEQAKLQDQIETLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTEWLTQRRNRLNMQRKSDAIRAKQIASEIAWSRDHQGSKKANKARLK--KLQEMESSGFRAS-SRVEEGQIVVPSGVRLGNKVIKVTNLRKQLDDGRVLFDKLSFEIPPHAIVGIVGGNGMGKSTLFNIIAGIEEPDEGDVELGKTVSLGFVSQSRD-ELSGRRTVYEEISGDNEFVEIGGDRINTRAYIASFNLRGGMQEKKVGSLSGGERNRVHLAKMLLGGHNVVMLDEPTNDLDVDTLRSLEAALSDFDGVSMVISHDRWFLDRICSHIIAFEGNGHVEFFDGNYTEYERERKQ 590
BLAST of NO06G00560 vs. NCBI_GenBank
Match: POM78693.1 (ABC transporter ABCF family [Phytophthora palmivora var. palmivora]) HSP 1 Score: 603.2 bits (1554), Expect = 8.700e-169 Identity = 300/549 (54.64%), Postives = 399/549 (72.68%), Query Frame = 0 Query: 32 AAASTASSSSTPSTGEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIR--QRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRI-SGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEY 578 AA S +S++ G+ +C L DV +PGG+ L L FLRGAKIGVLG NGSGKS+LLKVI+GV ++ G+ W K GLK YL QEPQLDP+ +V N+ G+ E + L+ +FD ++ MGEPDADFD LL+EQA+LQ +IE L CW+L H V+ M AL +P PDA V LSGGERRRVALCR+LLE+PD+LLLDEPTNHLDA+SV WLE FLQ Y+GT++++THDRYFLDN+A WVLE+DRG ++GNYT+WL + R +M+R +A +A+ + E+ W R Q S + +KAR+K + ++ E G ++E G+I++P G RLG++V+ V L K++ G+VLF+ +SF + P AIVG++G NG GKSTLFN++ G + D GSV++G TV LG VSQ RD EL ++VYEE++ + + +G ++TRAY+A+FNL+G MQEK VG LSGGERNRVHLAK++ HN++ LDEP+NDLDV TLR+LE AL DF G ++VISHDRWFLDR+C+H +AFE G V F GNY EY Sbjct: 41 AAPSGSSNAGGGVPGDFVCHLRDVGVTIPGGKKLFDRVSLGFLRGAKIGVLGSNGSGKSTLLKVIAGVSSDFDGERWIKDGLKVGYLPQEPQLDPSKNVYENIMDGLKESQTLLAKFDEVSMAMGEPDADFDALLDEQAKLQDQIEHLGCWDLSHEVEKAMAALRVPAPDADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYKGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTEWLTQRRNRFNMQRKSDAIRAKQIASEIAWSRDHQGSKKANKARLK--KLQEMESSGFRAS-SRVEEGQIVVPSGVRLGNKVIKVNNLRKQLDDGRVLFDKLSFEIPPHAIVGIVGGNGMGKSTLFNIIAGVEDPDEGSVDLGKTVSLGFVSQSRD-ELSGRRSVYEEISGDNEFVEIGGDRINTRAYIASFNLRGGMQEKKVGSLSGGERNRVHLAKMLLGGHNVVMLDEPTNDLDVDTLRSLEAALTDFDGVSMVISHDRWFLDRICSHIIAFEGNGRVEFFDGNYTEY 585
BLAST of NO06G00560 vs. NCBI_GenBank
Match: XP_002997751.1 (ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] >EEY67889.1 ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 602.4 bits (1552), Expect = 1.500e-168 Identity = 306/577 (53.03%), Postives = 408/577 (70.71%), Query Frame = 0 Query: 14 SARLTTIRHRLL---YHPLSNAAASTASSSSTPST-GEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIR--QRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRI-SGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEYVTYRAQ 584 S R +T+ L HP + A A+S++ G+ +C L V +PGG+ L + L FLRGAKIGVLG NGSGKS+LLK+++GV + G+ W K GLK YL QEPQLDP+ +V N+ G+ E + L+ +FD ++ MGEPDADFD LLEEQA LQ +IE L CW+L H V+ M AL +P DA V LSGGERRRVALCR+LLE+PD+LLLDEPTNHLDA+SV WLE FLQ YRGT++++THDRYFLDN+A WVLE+DRG ++GNYT+WL + R +M+R +A +A+ + E+ W R Q S + +KAR++ + ++ E G + ++E G+I++P G RLG++V+ V+ L K++ G+VLFE +SF + P AIVG++G NG GKSTLFN++ G D GSVE+G TV LG VSQ RD EL ++VYEE++ + + +G ++TRAY+A+FNL+G MQEK VG LSGGERNRVHLAK++ HN++ LDEP+NDLDV TLR+LE AL DF G ++VISHDRWFLDR+C+H +AFE +G V F GNY EY R Q Sbjct: 15 SLRTSTLAQNWLIAAQHPFNAARGFAAASNAGGGVPGDFVCHLRGVGMTIPGGKKLFERVSLGFLRGAKIGVLGANGSGKSTLLKIVAGVRNDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMDGLKESQTLLAKFDEVSMAMGEPDADFDALLEEQATLQDQIETLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTEWLSQRRNRFNMQRKSDAIRAKQIASEIAWSRDHQGSKKANKARLR--KLQEMESSGF-KASSRVEEGQIVVPSGVRLGNKVIKVKNLRKQLDDGRVLFEKLSFEIPPHAIVGIVGGNGMGKSTLFNIIAGIETPDQGSVELGKTVSLGFVSQSRD-ELSGRRSVYEEISGDNEFVEIGGDRINTRAYIASFNLRGGMQEKKVGSLSGGERNRVHLAKMLLGGHNVVMLDEPTNDLDVDTLRSLEAALTDFDGVSMVISHDRWFLDRICSHIIAFEGEGRVQFFDGNYTEYERERKQ 587
BLAST of NO06G00560 vs. NCBI_GenBank
Match: ETO86339.1 (hypothetical protein F444_00114 [Phytophthora parasitica P1976]) HSP 1 Score: 600.9 bits (1548), Expect = 4.300e-168 Identity = 300/555 (54.05%), Postives = 401/555 (72.25%), Query Frame = 0 Query: 27 HPLSNAAASTASSSSTPST-GEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIR--QRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRI-SGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEY 578 HP + A A+S++ G+ +C L DV +PGG+ L + L FLRGAKIGVLG NG+GKS+LLK+I+GV + G+ W K GLK YL QEPQLDP+ +V N+ G+ E + L+ +FD ++ MGEPDADFD LLEEQA+LQ +IE L CW+L H V+ M AL +P DA V LSGGERRRVALCR+LLE+PD+LLLDEPTNHLDA+SV WLE FLQ YRGT++++THDRYFLDN+A WVLE+DRG ++GNYT+WL + R +M+R +A +A+ + E+ W R Q S + +KAR++ + ++ E G + ++E G+I++P G RLG++V+ V L K++ G+VLF+ +SF + P AIVG++G NG GKSTLFN++ G + D GSVE+G TV LG VSQ RD EL ++VYEE++ + + +G ++TRAY+A+FNL+G MQEK VG LSGGERNRVHLAK++ HN++ LDEP+NDLDV TLR+LE AL DF G ++VISHDRWFLDR+C+H +AFE G V F GNY EY Sbjct: 46 HPYNAARGFAAASNAGGGVPGDFVCHLRDVGMTIPGGKKLFERVSLGFLRGAKIGVLGANGTGKSTLLKIIAGVRKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMDGLKESQELLAKFDEVSMAMGEPDADFDALLEEQAKLQDQIETLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTEWLTQRRNRFNMQRKSDAIRAKQIASEIAWSRDHQGSKKANKARLR--KLQEMESSGF-KASSRVEEGQIVVPSGVRLGNKVIKVNNLRKQLDDGRVLFDKLSFEIPPHAIVGIVGGNGMGKSTLFNIIAGIEKPDEGSVELGKTVSLGFVSQSRD-ELSGRRSVYEEISGDNEFVEIGGDRINTRAYIASFNLRGGMQEKKVGSLSGGERNRVHLAKMLLGGHNVVMLDEPTNDLDVDTLRSLEAALTDFDGVSMVISHDRWFLDRICSHIIAFEGDGRVEFFDGNYTEY 596
BLAST of NO06G00560 vs. NCBI_GenBank
Match: ETI57597.1 (hypothetical protein F443_00118 [Phytophthora parasitica P1569] >ETK97332.1 hypothetical protein L915_00115 [Phytophthora parasitica] >ETL50690.1 hypothetical protein L916_00107 [Phytophthora parasitica] >ETP27369.1 hypothetical protein F441_00118 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 600.5 bits (1547), Expect = 5.600e-168 Identity = 300/555 (54.05%), Postives = 401/555 (72.25%), Query Frame = 0 Query: 27 HPLSNAAASTASSSSTPST-GEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIR--QRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRI-SGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEY 578 HP + A A+S++ G+ +C L DV +PGG+ L + L FLRGAKIGVLG NG+GKS+LLK+I+GV + G+ W K GLK YL QEPQLDP+ +V N+ G+ E + L+ +FD ++ MGEPDADFD LLEEQA+LQ +IE L CW+L H V+ M AL +P DA V LSGGERRRVALCR+LLE+PD+LLLDEPTNHLDA+SV WLE FLQ YRGT++++THDRYFLDN+A WVLE+DRG ++GNYT+WL + R +M+R +A +A+ + E+ W R Q S + +KAR++ + ++ E G + ++E G+I++P G RLG++V+ V L K++ G+VLF+ +SF + P AIVG++G NG GKSTLFN++ G + D GSVE+G TV LG VSQ RD EL ++VYEE++ + + +G ++TRAY+A+FNL+G MQEK VG LSGGERNRVHLAK++ HN++ LDEP+NDLDV TLR+LE AL DF G ++VISHDRWFLDR+C+H +AFE G V F GNY EY Sbjct: 46 HPYNAARGFAAASNAGGGVPGDFVCHLRDVGMTIPGGKKLFERVSLGFLRGAKIGVLGANGTGKSTLLKIIAGVRKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMDGLKESQELLAKFDEVSMAMGEPDADFDALLEEQAKLQDQIETLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTEWLTQRRNRFNMQRKSDAIRAKQIASEIAWSRDHQGSKKANKARLR--KLQEMESSGF-KASSRVEEGQIVVPSGVRLGNKVIRVNNLRKQLDDGRVLFDKLSFEIPPHAIVGIVGGNGMGKSTLFNIIAGIEKPDEGSVELGKTVSLGFVSQSRD-ELSGRRSVYEEISGDNEFVEIGGDRINTRAYIASFNLRGGMQEKKVGSLSGGERNRVHLAKMLLGGHNVVMLDEPTNDLDVDTLRSLEAALTDFDGVSMVISHDRWFLDRICSHIIAFEGDGRVEFFDGNYTEY 596
BLAST of NO06G00560 vs. NCBI_GenBank
Match: ETM03727.1 (hypothetical protein L917_00100 [Phytophthora parasitica]) HSP 1 Score: 600.5 bits (1547), Expect = 5.600e-168 Identity = 300/555 (54.05%), Postives = 401/555 (72.25%), Query Frame = 0 Query: 27 HPLSNAAASTASSSSTPST-GEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIR--QRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRI-SGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEY 578 HP + A A+S++ G+ +C L DV +PGG+ L + L FLRGAKIGVLG NG+GKS+LLK+I+GV + G+ W K GLK YL QEPQLDP+ +V N+ G+ E + L+ +FD ++ MGEPDADFD LLEEQA+LQ +IE L CW+L H V+ M AL +P DA V LSGGERRRVALCR+LLE+PD+LLLDEPTNHLDA+SV WLE FLQ YRGT++++THDRYFLDN+A WVLE+DRG ++GNYT+WL + R +M+R +A +A+ + E+ W R Q S + +KAR++ + ++ E G + ++E G+I++P G RLG++V+ V L K++ G+VLF+ +SF + P AIVG++G NG GKSTLFN++ G + D GSVE+G TV LG VSQ RD EL ++VYEE++ + + +G ++TRAY+A+FNL+G MQEK VG LSGGERNRVHLAK++ HN++ LDEP+NDLDV TLR+LE AL DF G ++VISHDRWFLDR+C+H +AFE G V F GNY EY Sbjct: 46 HPYNAARGFAAASNAGGGVPGDFVCHLRDVGMTIPGGKKLFERVSLGFLRGAKIGVLGANGTGKSTLLKIIAGVRKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMDGLKESQELLAKFDEVSMAMGEPDADFDALLEEQAKLQDQIETLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTEWLTQRRNRFNMQRKSDAIRAKQIASEIAWSRDHQGSKKANKARLR--KLQEMESSGF-KASSRVEEGQIVVPSGVRLGNKVIRVNNLRKQLDDGRVLFDKLSFEIPPHAIVGIVGGNGMGKSTLFNIIAGIEKPDEGSVELGKTVSLGFVSQSRD-ELSGRRSVYEEISGDNEFVEIGGDRINTRAYIASFNLRGGMQEKKVGSLSGGERNRVHLAKMLLGGHNVVMLDEPTNDLDVDTLRSLEAALTDFDGVSMVISHDRWFLDRICSHIIAFEGDGRVEFFDGNYTEY 596
BLAST of NO06G00560 vs. NCBI_GenBank
Match: XP_008889709.1 (hypothetical protein PPTG_00097 [Phytophthora parasitica INRA-310] >ETM57013.1 hypothetical protein L914_00107 [Phytophthora parasitica] >ETN23503.1 hypothetical protein PPTG_00097 [Phytophthora parasitica INRA-310]) HSP 1 Score: 600.5 bits (1547), Expect = 5.600e-168 Identity = 300/555 (54.05%), Postives = 401/555 (72.25%), Query Frame = 0 Query: 27 HPLSNAAASTASSSSTPST-GEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIR--QRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRI-SGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEY 578 HP + A A+S++ G+ +C L DV +PGG+ L + L FLRGAKIGVLG NG+GKS+LLK+I+GV + G+ W K GLK YL QEPQLDP+ +V N+ G+ E + L+ +FD ++ MGEPDADFD LLEEQA+LQ +IE L CW+L H V+ M AL +P DA V LSGGERRRVALCR+LLE+PD+LLLDEPTNHLDA+SV WLE FLQ YRGT++++THDRYFLDN+A WVLE+DRG ++GNYT+WL + R +M+R +A +A+ + E+ W R Q S + +KAR++ + ++ E G + ++E G+I++P G RLG++V+ V L K++ G+VLF+ +SF + P AIVG++G NG GKSTLFN++ G + D GSVE+G TV LG VSQ RD EL ++VYEE++ + + +G ++TRAY+A+FNL+G MQEK VG LSGGERNRVHLAK++ HN++ LDEP+NDLDV TLR+LE AL DF G ++VISHDRWFLDR+C+H +AFE G V F GNY EY Sbjct: 46 HPYNAARGFAAASNAGGGVPGDFVCHLRDVGMTIPGGKKLFERVSLGFLRGAKIGVLGANGTGKSTLLKIIAGVRKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMDGLKESQELLAKFDKVSMAMGEPDADFDALLEEQAKLQDQIETLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTEWLTQRRNRFNMQRKSDAIRAKQIASEIAWSRDHQGSKKANKARLR--KLQEMESSGF-KASSRVEEGQIVVPSGVRLGNKVIRVNNLRKQLDDGRVLFDKLSFEIPPHAIVGIVGGNGMGKSTLFNIIAGIEKPDEGSVELGKTVSLGFVSQSRD-ELSGRRSVYEEISGDNEFVEIGGDRINTRAYIASFNLRGGMQEKKVGSLSGGERNRVHLAKMLLGGHNVVMLDEPTNDLDVDTLRSLEAALTDFDGVSMVISHDRWFLDRICSHIIAFEGDGRVEFFDGNYTEY 596
BLAST of NO06G00560 vs. NCBI_GenBank
Match: ETP55320.1 (hypothetical protein F442_00106 [Phytophthora parasitica P10297]) HSP 1 Score: 600.5 bits (1547), Expect = 5.600e-168 Identity = 300/555 (54.05%), Postives = 401/555 (72.25%), Query Frame = 0 Query: 27 HPLSNAAASTASSSSTPST-GEIICSLTDVTKVLPGGRVLLQDTRLSFLRGAKIGVLGVNGSGKSSLLKVISGVDTEHHGKVWRKPGLKFMYLTQEPQLDPALDVRGNVRLGIAEQEALMEEFDAIATKMGEPDADFDVLLEEQAELQSRIEALDCWNLEHRVDTVMKALHLPPPDASVASLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVGWLERFLQDYRGTLIAVTHDRYFLDNIAEWVLEVDRGSLIPFKGNYTQWLVHKAARLDMERGKEAAQARALQGELDWIR--QRSNQVSKARVKSAEARKKEQKGLAEKIQQLETGKIIIPPGPRLGDRVMSVQGLSKRI-SGKVLFEDVSFILEPGAIVGVIGANGCGKSTLFNVLCGRTEADAGSVEIGSTVKLGLVSQIRDEELDDAKTVYEEVAQSEDVIAMGDRTVHTRAYLAAFNLKGPMQEKMVGDLSGGERNRVHLAKVMKRRHNLLFLDEPSNDLDVATLRALEEALRDFSGCAVVISHDRWFLDRVCTHTLAFEEKGNVCMFPGNYNEY 578 HP + A A+S++ G+ +C L DV +PGG+ L + L FLRGAKIGVLG NG+GKS+LLK+I+GV + G+ W K GLK YL QEPQLDP+ +V N+ G+ E + L+ +FD ++ MGEPDADFD LLEEQA+LQ +IE L CW+L H V+ M AL +P DA V LSGGERRRVALCR+LLE+PD+LLLDEPTNHLDA+SV WLE FLQ YRGT++++THDRYFLDN+A WVLE+DRG ++GNYT+WL + R +M+R +A +A+ + E+ W R Q S + +KAR++ + ++ E G + ++E G+I++P G RLG++V+ V L K++ G+VLF+ +SF + P AIVG++G NG GKSTLFN++ G + D GSVE+G TV LG VSQ RD EL ++VYEE++ + + +G ++TRAY+A+FNL+G MQEK VG LSGGERNRVHLAK++ HN++ LDEP+NDLDV TLR+LE AL DF G ++VISHDRWFLDR+C+H +AFE G V F GNY EY Sbjct: 46 HPYNAARGFAAASNAGGGVPGDFVCHLRDVGMTIPGGKKLFERVSLGFLRGAKIGVLGANGTGKSTLLKIIAGVRKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMDGLKESQELLAKFDEVSMAMGEPDADFDALLEEQAKLQDQIETLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTEWLTQRRNRFNMQRKSDAIRAKQIASEIAWSRDHQGSKKANKARLR--KLQEMESSGF-KASSRVEEGQIVVPSGVRLGNKVIRVNNLRKQLDDGRVLFDKLSFEIPPHAIVGIVGGNGMGKSTLFNIIAGIEKPDEGSVELGKTVSLGFVSQSRD-ELSGRRSVYEEISGDNEFVEIGGDRINTRAYIASFNLRGGMQEKKVGSLSGGERNRVHLAKMLLGGHNVVMLDEPTNDLDVDTLRSLEAALTDFDGVSMVISHDRWFLDRICSHIIAFEGDGRVEFFDGNYTEY 596 The following BLAST results are available for this feature:
BLAST of NO06G00560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00560 ID=NO06G00560|Name=NO06G00560|organism=Nannochloropsis oceanica|type=gene|length=2154bpback to top protein sequence of NO06G00560.1 >NO06G00560.1-protein ID=NO06G00560.1-protein|Name=NO06G00560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=597bpback to top Synonyms
Publications
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