NO06G00290, NO06G00290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM26485.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 107.5 bits (267), Expect = 5.100e-20 Identity = 80/201 (39.80%), Postives = 104/201 (51.74%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPGTAPPTAAPT 198 MR ALSL+ LGVT T TA L L SI+ VD + NKD W +KG NDP + A G TGLT L + D ++ F A DCR+ + + CK+ GAR+S+K T R PK + ++ + YY V+G FR F EN + SPL AA I G+ +SD C + + R T C PG PP PT Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIK-TSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGS-VLSDTLTSCYDLARKSGRNTISHCEPG--PPAPTPT 197
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM27399.1 (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 105.9 bits (263), Expect = 1.500e-19 Identity = 78/201 (38.81%), Postives = 104/201 (51.74%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGA--DEISDINYKCTEKVGTRATKFLCTPGTAPPTAAPT 198 MR LSL+ALG+TL T TA L L SI+AVD + NKD W +KG NDP + A G GLT L + D ++ F A DCR+ + + CK+ GAR+S+K T R PK + ++ + YY V+G FR F EN + SPL AA ++ + + + Y K G R T C PG PP PT Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIK-TSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTVDESVLSDTLTLCYNLPRKNG-RNTISHCEPG--PPVPTPT 197
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 104.4 bits (259), Expect = 4.300e-19 Identity = 70/190 (36.84%), Postives = 106/190 (55.79%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTP 188 MR LSL+ALG+TL +TA + L +IK + +DQWS+KG ++P N + G +GLT L + + ++ F A +C+LL N +GV CK GAR+ +KRT+R PK A + ++ + + YY SG+FRR +F ++T+ +PL + G + I C+E K R TK CTP Sbjct: 1 MRCILSLLALGITLVMTAGQ---EFTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKV---KSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQL-VVGTTTLPAIVSTCSERTKSAGRITKITCTP 182
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana]) HSP 1 Score: 100.5 bits (249), Expect = 6.200e-18 Identity = 74/197 (37.56%), Postives = 99/197 (50.25%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALT-AAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPGTAPPT 194 MR LSL+ALG+TL T T +L L SI+AVD + NKD W +KG NDP + G GLT L + D ++ F A DCR+ + K CK+ GAR+ +K ++R + V R +T YY V+G FRR F EN + SPL AA + +SD C + + R C PG PT Sbjct: 69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIKTSRRPKINTPKTVHAKRYNST-GGYYSVTGTFRRLTFLENPVVSPLTAALTV-NESVLSDTLTSCYDLPRKNGRNPITHCEPGPPVPT 263
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM20775.1 (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana]) HSP 1 Score: 100.1 bits (248), Expect = 8.100e-18 Identity = 72/204 (35.29%), Postives = 102/204 (50.00%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPGTAPPTAAPTSGP 201 MR A S +A+G+T + TA L L SI+AVD + ANKD W +KG +DP + TGL L +G D ++ F A DCR+ N + CK+ GAR+S+K ++R PK + + + YYRV+G R F E+ + SPL A + G D +SD C + ++ R T C PG PT P Sbjct: 1 MRSAFSFLAVGITFGSSLVTTAGQDLNLKSIRAVDRSVANKDTWKMKGKIDDPSMTIVPEIAQTGLIVELQDGGSDPLNTVTFAASDCRVPTNGRRATCKIRGARVSIKSSRR-PKLKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSPLTAKLTVNG-DVLSDTLTSCYDLPRMNGRNTITHCEPGPPVPTPGXXPSP 202
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM25644.1 (hypothetical protein Naga_100037g5 [Nannochloropsis gaditana]) HSP 1 Score: 95.9 bits (237), Expect = 1.500e-16 Identity = 55/156 (35.26%), Postives = 86/156 (55.13%), Query Frame = 0 Query: 37 RANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADE----ISDINYKCTE--KVGTRATKFLC 186 +A +D+W++ G+FNDP A++ G G+ A+L + + +S T F C+ LNN +GV CK TGARL LK+T KD + RN ++ ++Y+V GVFRR F + + +PL F ++ + + +CTE K G + TK C Sbjct: 163 KAKRDRWTITGFFNDPAETAVVNIGQYGIIAVLQDAAKKALSSTFFTPPQCKALNNIRGVTCKTTGARLRLKKT----KDPSV-----RNKSSEGAFYKVKGVFRRLTFLQQPVQTPLTTIFAVQFPNTTTVFTTSATEQCTEKGKTGGKKTKIDC 309
BLAST of NO06G00290 vs. NCBI_GenBank
Match: XP_005854458.1 (glycosyl hydrolase [Nannochloropsis gaditana CCMP526] >EKU21904.1 glycosyl hydrolase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.6 bits (179), Expect = 8.100e-10 Identity = 52/152 (34.21%), Postives = 75/152 (49.34%), Query Frame = 0 Query: 45 VKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPGTAPPT 194 +KG +DP + A TGLT L + D ++ F A DCR+ + + CK+ GAR+S+K T R PK + ++ + YY V+G FR F EN + SPL AA + G+ +SD C + + R T C PG PT Sbjct: 1 MKGSISDPSLTIVSAIRQTGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIK-TSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLAAALRVNGS-VLSDTLTSCYDLARKSGRNTITHCEPGPLVPT 150 The following BLAST results are available for this feature:
BLAST of NO06G00290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00290 ID=NO06G00290|Name=NO06G00290|organism=Nannochloropsis oceanica|type=gene|length=1080bpback to top protein sequence of NO06G00290.1 >NO06G00290.1-protein ID=NO06G00290.1-protein|Name=NO06G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=202bpback to top Synonyms
Publications
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