NO06G00140, NO06G00140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_075507425.1 (hypothetical protein [Prochlorococcus marinus]) HSP 1 Score: 119.0 bits (297), Expect = 2.500e-23 Identity = 62/204 (30.39%), Postives = 108/204 (52.94%), Query Frame = 0 Query: 3 YQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE---MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 Y ++ E +Y F + + E+LL+SGS K+ D L L K+K + ++ G+A+NPYL + + E RF KI+TGL++S+W Q G+D L+ + + ++ + + + GS+ IPS++F+A KFRPW V +SE +L ++E T +++ YK + P++ES + L+ V + L Sbjct: 68 YHQYSKNKENSYQEFLDFVKSSQTNKNFEILLLSGSNKKKNFDSVDVLTYLKKEKNLK------VKLGIAYNPYLKKYYNISSERERFEKKISTGLINSIWFQYGTDIKVLQNEMTY--LKNVAKKEKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKFLYAIENFFDFTNDLVSFYKNNNIIPVIESDFSSSEKLDSVYSFL 263
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_036907162.1 (hypothetical protein [Prochlorococcus marinus] >KGG19538.1 putative Paired amphipathic helix repeat [Prochlorococcus marinus str. PAC1]) HSP 1 Score: 118.6 bits (296), Expect = 3.200e-23 Identity = 70/183 (38.25%), Postives = 105/183 (57.38%), Query Frame = 0 Query: 28 GVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE--MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRI---ETEGRSPPIRVI---GSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNL 203 G VLLVSGS ++ LD + L L KD F + FGVAFNPYLP +EE R K+ +GLVSS+W+Q G+D L+ ++ + + T ++P I I GS++IPS++FLA K+RPW GV S +L S E A+K +L YK + P++E+ + + L+++ N+ Sbjct: 99 GCNHVLLVSGSQKRKSLDSVSALSIL-KDNSL--FFNQDISFGVAFNPYLPPYLFDEEILRLEKKLQSGLVSSIWIQFGTDYKLLKSRIEILSLMISATINKNPKISKISLFGSILIPSKQFLARFKYRPWKGVYCSNEFLESEEMAHKIITNLLKNYKQNEICPLIETNITTDEHLKKLSNI 278
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_075488016.1 (hypothetical protein [Prochlorococcus marinus]) HSP 1 Score: 118.2 bits (295), Expect = 4.200e-23 Identity = 61/189 (32.28%), Postives = 107/189 (56.61%), Query Frame = 0 Query: 3 YQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPEM---EEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVES 189 Y ++ E +Y + F ++ S E+LLVSGS K+ L ++ ++K + ++ G+A+NPYL + E RF K+++GL++S+W Q G+D AL+ L + ++ + I + GS++IPS++F+A KFRPW GV +SE +L S+ + N TK ++ YK + P++E+ Sbjct: 68 YHQYSQNKENSYQLLLDFLKNSFSNRNYEILLVSGSIKKKNFHAINVLNKIKEEKNLK------VKLGIAYNPYLKKYYNDTSERERFEKKLSSGLINSIWFQYGTDIKALQNELTY--LKKVAKQEKINLFGSLLIPSKQFIARFKFRPWKGVYISENFLYSLYDFNNFTKDLVCFYKNNNITPVIET 248
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_079317619.1 (hypothetical protein [Prochlorococcus sp. HOT208_60m_813O14]) HSP 1 Score: 118.2 bits (295), Expect = 4.200e-23 Identity = 64/204 (31.37%), Postives = 105/204 (51.47%), Query Frame = 0 Query: 3 YQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE---MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 Y ++ E +Y F + S E+LLVSGS K+ D L L K+K + ++ G+++NPYL + + E R KI+TGL++S+W Q G+D L+ + + I+ + + GS+ IPS++F+A KFRPW V +SE YL +E T +++ YK + P++ES + L+ V + L Sbjct: 68 YHQYSKNKEKSYKDFLDFVKSSQSNNNYEILLVSGSNKKKNFDSVNVLAYLKKEKNFK------VKLGISYNPYLKKYYNISSERERLERKISTGLINSIWFQYGTDIKVLQNEVTY--IKNVAKEEKFNLFGSLFIPSKQFIARFKFRPWKEVYISEKYLYDLENFFDFTNDLVSFYKNNNITPVIESDFSSSEKLDSVYSFL 263
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_032518983.1 (hypothetical protein [Prochlorococcus marinus] >KGG09777.1 putative Paired amphipathic helix repeat [Prochlorococcus marinus str. SB]) HSP 1 Score: 117.9 bits (294), Expect = 5.500e-23 Identity = 63/204 (30.88%), Postives = 106/204 (51.96%), Query Frame = 0 Query: 3 YQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE---MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 Y ++ E +Y F + + + E+LLVSGS K+ D L L + K + ++ G+A+NPYL + + E RF KI+TGL++S+W Q G+D L+ + + ++ + + + GS+ IPS++F+A KFRPW V +SE LS +E T +++ YK + P++ES + L V + L Sbjct: 68 YHQYSKNKEKSYQEFLDFVKSSKTNKIYEILLVSGSNKKKNFDSVDVLAYLKRKKYLK------VKLGIAYNPYLEKYYNISSERERFEKKISTGLINSIWFQYGTDIKVLQNEMTY--LKNVAKEEKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLSDLENFFDFTNDLVSFYKKNNITPVIESDFSSLEKLHSVYSFL 263
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_079331302.1 (hypothetical protein [Prochlorococcus sp. HOT208_60m_813I02]) HSP 1 Score: 117.9 bits (294), Expect = 5.500e-23 Identity = 64/204 (31.37%), Postives = 107/204 (52.45%), Query Frame = 0 Query: 3 YQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE---MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 Y ++ E +Y F + + E+LLVSGS K+ D L L K+K + ++ G+A+NPYL + + E RF KI+TGL++S+W Q G+D L+K + +++ + + + GS+ IPS++F+A KFRPW V +SE L ++ TK +++ YK + P++ES + L V + L Sbjct: 68 YHQYSKNKEKSYQEFLDFVNSSQTNKNYEILLVSGSNKKKNFDSVDVLAYLKKEKNLK------VKLGIAYNPYLKKYYNISSERERFEKKISTGLINSIWFQYGTDIKVLQKEVTYLKKVV--KEEKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLYALGNFFDFTKDLVSFYKKNNITPVIESDFSSSEKLASVSSFL 263
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_011863036.1 (hypothetical protein [Prochlorococcus marinus] >ABO17695.1 possible Paired amphipathic helix repeat [Prochlorococcus marinus str. MIT 9301]) HSP 1 Score: 117.5 bits (293), Expect = 7.200e-23 Identity = 63/204 (30.88%), Postives = 109/204 (53.43%), Query Frame = 0 Query: 3 YQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE---MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 Y ++ E +Y F + + E+LLVSGS K+ D L L K+K + ++ G+A+NPYL + + E RF KI+TGL++S+W Q G+D L L +++ T + + + GS+ IPS++F++ KFRPW V +SE L +++ T+ +++ YK+ + P++ES + L+ V + L Sbjct: 68 YHQYSKNKEKSYQDFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKKEKNLK------VKLGIAYNPYLKKYYNISSERERFERKISTGLINSIWFQYGTDIKVLHNELTYLKKIT--KDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSNNITPVIESDFSSSDKLDSVYSFL 263
BLAST of NO06G00140 vs. NCBI_GenBank
Match: KOO26762.1 (hypothetical protein Ctob_011767 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 117.5 bits (293), Expect = 7.200e-23 Identity = 63/137 (45.99%), Postives = 83/137 (60.58%), Query Frame = 0 Query: 70 GVAFNPYLPEMEEEESRFRAKIATGL---VSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 GVAFNP+ PE + VSSVWLQLGSD A L +GL F+R R I + GSV +PS++ LA M+FRPW+GV LSE YL SV A T +L +Y+A+GVE +VE+AV+ +A+ + LL Sbjct: 12 GVAFNPFFPERTDRXXXXXXXXXXXXXXRVSSVWLQLGSDVALLEEGLSFLRTLALERQLSIELFGSVFLPSKRLLAQMRFRPWNGVFLSEQYLESVAAAEAITARVLRLYRAHGVEVLVETAVRTKAEWMAAERLL 148
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_079333398.1 (hypothetical protein [Prochlorococcus sp. HOT208_60m_813B04]) HSP 1 Score: 117.5 bits (293), Expect = 7.200e-23 Identity = 63/204 (30.88%), Postives = 107/204 (52.45%), Query Frame = 0 Query: 3 YQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE---MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 Y ++ E +Y F + + E+LLVSGS K+ D L L K+K + ++ G+A+NPYL + + E RF KI+TGL++S+W Q G+D L+ + + ++ + + + GS+ IPS++F+A KFRPW V +SE +L ++E T +++ YK + P++ES + L V + L Sbjct: 68 YHQYSKNKEKSYQEFLDFVKYSQTNKNHEILLVSGSNKKKNFDSVDVLAYLKKEKNLK------VKLGIAYNPYLKKYYNISSERERFEKKISTGLINSIWFQYGTDIKVLQNEVTY--LKNVAKEEKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKFLYALENFFDFTNDLVSFYKKNNITPVIESDFSSSEKLYSVFSFL 263
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_011293659.1 (hypothetical protein [Prochlorococcus marinus] >AAZ57617.1 possible paired amphipathic helix repeat [Prochlorococcus marinus str. NATL2A]) HSP 1 Score: 117.1 bits (292), Expect = 9.300e-23 Identity = 69/183 (37.70%), Postives = 104/183 (56.83%), Query Frame = 0 Query: 28 GVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE--MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVR---IETEGRSPPIRVI---GSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNL 203 G + VLLVSGS + +D + L L KD F + FGVAFNPYLP +EE R K+ +GLVSS+W+Q G+D L+ ++ + T ++P I I GS++IPS++FLA K+RPW GV S +L S E A+K +L YK + P++E+ + + L+++ N+ Sbjct: 99 GCKHVLLVSGSQKRASIDSVSALYML-KDNSL--FFNQDISFGVAFNPYLPPYLFDEEILRLEKKLQSGLVSSIWIQFGTDYQLLKSRIEILSRMISATINKNPKISKIILFGSILIPSKQFLARFKYRPWKGVYCSNEFLESEEMAHKIITNLLKTYKQNEICPLIETNITTDEHLKKLSNI 278 The following BLAST results are available for this feature:
BLAST of NO06G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00140 ID=NO06G00140|Name=NO06G00140|organism=Nannochloropsis oceanica|type=gene|length=2596bpback to top protein sequence of NO06G00140.1 >NO06G00140.1-protein ID=NO06G00140.1-protein|Name=NO06G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bpback to top protein sequence of NO06G00140.2 >NO06G00140.2-protein ID=NO06G00140.2-protein|Name=NO06G00140.2|organism=Nannochloropsis oceanica|type=polypeptide|length=371bpback to top Synonyms
Publications
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