NO05G05390, NO05G05390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G05390 vs. NCBI_GenBank
Match: KPL74509.1 (MFS transporter [Bellilinea caldifistulae] >GAP11712.1 arabinose efflux permease [Bellilinea caldifistulae]) HSP 1 Score: 105.9 bits (263), Expect = 4.600e-19 Identity = 65/179 (36.31%), Postives = 101/179 (56.42%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRV-FELDSRGILKRAAILPAVSFCYASVFIKET 481 L VFV F+D +G L PLLP+Y A++F++GL++A LAQ + + G +SD++GRR V+L L + +S L+ A L + R++ G+ G + +AQ+ + D+ RA+ LG I A G GF+ GPA+G L SR F + S AA+L AV+F ++ E+ Sbjct: 7 LSTVFVIIFIDLLGFSLILPLLPYYAKQFNASSFEIGLLVAVYALAQFLAAPIFGRLSDRFGRRPVLLISLAGNILSFVLLGLAANLWMLFAARILAGIIGSNISVAQAYITDVTDESNRARGLGLIGAAFGLGFILGPAIGGLLSRFGFAVPSFA----AAVLSAVNFVMVFFWLPES 181
BLAST of NO05G05390 vs. NCBI_GenBank
Match: WP_082149193.1 (MFS transporter [Bellilinea caldifistulae]) HSP 1 Score: 105.9 bits (263), Expect = 4.600e-19 Identity = 65/179 (36.31%), Postives = 101/179 (56.42%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRV-FELDSRGILKRAAILPAVSFCYASVFIKET 481 L VFV F+D +G L PLLP+Y A++F++GL++A LAQ + + G +SD++GRR V+L L + +S L+ A L + R++ G+ G + +AQ+ + D+ RA+ LG I A G GF+ GPA+G L SR F + S AA+L AV+F ++ E+ Sbjct: 21 LSTVFVIIFIDLLGFSLILPLLPYYAKQFNASSFEIGLLVAVYALAQFLAAPIFGRLSDRFGRRPVLLISLAGNILSFVLLGLAANLWMLFAARILAGIIGSNISVAQAYITDVTDESNRARGLGLIGAAFGLGFILGPAIGGLLSRFGFAVPSFA----AAVLSAVNFVMVFFWLPES 195
BLAST of NO05G05390 vs. NCBI_GenBank
Match: SDQ64788.1 (Predicted arabinose efflux permease, MFS family [Thermostaphylospora chromogena]) HSP 1 Score: 105.1 bits (261), Expect = 7.900e-19 Identity = 81/251 (32.27%), Postives = 128/251 (51.00%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRVFELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDR-ARRSQGNIGSSTSXXXXXTTARPTPLSTPMDENVAFPILPVRLLVLNGFLLMYAF-SVETVYAM 552 L+ + +A F+D +G G+ PLLPF+ LG + +G VL AQ + V+G++SD++GRR V+L L S VSL+L A +L + R++ G+FGG +P+AQ+ V DL + R + LG + A +G GFV GPALG + S L G+ A + +F + + + A DR + S G R TP +P A + +R +++ F + +AF +E YA+ Sbjct: 6 LLVICLAVFVDMLGFGIILPLLPFHAEQLGGSGLWVGGVLTAYAAAQFIAAPVLGALSDRFGRRPVLLAALAGSAVSLALTGIAGSLITLFAARLVAGLFGGAIPVAQAYVVDLTEPQERTRALGLVGASIGMGFVFGPALGAVLS---GLGFAGVSFVAGGIALANFIAGWMLLPRSAAPAPADRVSAGSDERPGEQQDATPEPGGERVTPGGSPALLVSALRVSALRPVLVAIFAVTFAFVGMEATYAL 253
BLAST of NO05G05390 vs. NCBI_GenBank
Match: OIP73588.1 (hypothetical protein AUK08_03380 [Candidatus Pacebacteria bacterium CG2_30_36_39] >PIR64831.1 MFS transporter [Candidatus Pacebacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_11] >PJC42597.1 MFS transporter [Candidatus Pacebacteria bacterium CG_4_9_14_0_2_um_filter_36_8]) HSP 1 Score: 105.1 bits (261), Expect = 7.900e-19 Identity = 64/191 (33.51%), Postives = 105/191 (54.97%), Query Frame = 0 Query: 302 RLVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRV-FELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDRARR 492 R+ +F+ F + +G G+ PLLP+Y+ SLGA +GL+ A L Q + ++G +SDK GRR +++ L + +S L+ AK+LP + R+I G GG + AQ+ VAD+ E R + +G + A + GF+ GPA G L SR + + + + I +++ Y IKE K +L + +R Sbjct: 5 RMWIIFLIVFTNFLGFGIILPLLPYYVESLGAGVIAIGLLSATYSLFQLLAAPILGELSDKVGRRPILIFSLAGTTISFILLGLAKSLPLLFISRIIDGASGGNISTAQAYVADITSKENRTQGMGFLMAALSLGFILGPATGGLLSRFGYSVPAYVAAGVSLIATVLTYFYLPESIKEKKILGILPQKKR 195
BLAST of NO05G05390 vs. NCBI_GenBank
Match: WP_017299054.1 (tetracycline resistance MFS efflux pump [Nodosilinea nodulosa]) HSP 1 Score: 104.8 bits (260), Expect = 1.000e-18 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 0 Query: 301 PRLVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALG 445 PRLV +F+ D +G L P+LPF + ++AF LG++++ +AQ + V+G++SD+YGRR VML C++ + +S + A TL + F R++ G GG AQ+ +AD+ E RAK G A G GF GPALG Sbjct: 14 PRLVFIFITILFDKLGESLIFPILPFLVERFRSDAFTLGMLVSSYAIAQFIAIPVIGALSDRYGRRPVMLICVMGTAISYFIFGFATTLGVLFFSRILDGATGGVAATAQAYIADISAPEDRAKNFGITGAAFGLGFTLGPALG 157
BLAST of NO05G05390 vs. NCBI_GenBank
Match: WP_093258395.1 (MFS transporter [Thermostaphylospora chromogena]) HSP 1 Score: 104.4 bits (259), Expect = 1.300e-18 Identity = 80/251 (31.87%), Postives = 128/251 (51.00%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRVFELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDR-ARRSQGNIGSSTSXXXXXTTARPTPLSTPMDENVAFPILPVRLLVLNGFLLMYAF-SVETVYAM 552 ++ + +A F+D +G G+ PLLPF+ LG + +G VL AQ + V+G++SD++GRR V+L L S VSL+L A +L + R++ G+FGG +P+AQ+ V DL + R + LG + A +G GFV GPALG + S L G+ A + +F + + + A DR + S G R TP +P A + +R +++ F + +AF +E YA+ Sbjct: 1 MLVICLAVFVDMLGFGIILPLLPFHAEQLGGSGLWVGGVLTAYAAAQFIAAPVLGALSDRFGRRPVLLAALAGSAVSLALTGIAGSLITLFAARLVAGLFGGAIPVAQAYVVDLTEPQERTRALGLVGASIGMGFVFGPALGAVLS---GLGFAGVSFVAGGIALANFIAGWMLLPRSAAPAPADRVSAGSDERPGEQQDATPEPGGERVTPGGSPALLVSALRVSALRPVLVAIFAVTFAFVGMEATYAL 248
BLAST of NO05G05390 vs. NCBI_GenBank
Match: GAP62894.1 (MFS transporter, DHA1 family, tetracycline resistance protein [Ardenticatena maritima]) HSP 1 Score: 104.0 bits (258), Expect = 1.800e-18 Identity = 60/169 (35.50%), Postives = 98/169 (57.99%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPAL-GLLGSRVFELDSRGILKRAAILPAVSF 471 L+ +F F++ IG G+ PLLP Y + GA +Q+GL+ A +AQ + V+G++SD+YGRR ++L L+ + +S ++A A +L + R++ G+ GG +P A++ ++D+ E RA G I A G GF+ GP L GLL + + G AAI ++F Sbjct: 50 LLIIFAIIFVNLIGFGIIIPLLPLYAVEFGATEWQVGLLFASYSVAQLIATPVLGALSDRYGRRPILLLSLLGTVISFVMMALANSLAMLFLARIVDGISGGNIPTARAYISDITTREERAGAYGLIGAAFGLGFILGPVLAGLLANFGLAAPAWGAALLAAIALVMTF 218
BLAST of NO05G05390 vs. NCBI_GenBank
Match: KPL89208.1 (hypothetical protein SE16_01515 [Ardenticatena maritima]) HSP 1 Score: 104.0 bits (258), Expect = 1.800e-18 Identity = 60/169 (35.50%), Postives = 98/169 (57.99%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPAL-GLLGSRVFELDSRGILKRAAILPAVSF 471 L+ +F F++ IG G+ PLLP Y + GA +Q+GL+ A +AQ + V+G++SD+YGRR ++L L+ + +S ++A A +L + R++ G+ GG +P A++ ++D+ E RA G I A G GF+ GP L GLL + + G AAI ++F Sbjct: 7 LLIIFAIIFVNLIGFGIIIPLLPLYAVEFGATEWQVGLLFASYSVAQLIATPVLGALSDRYGRRPILLLSLLGTVISFVMMALANSLAMLFLARIVDGISGGNIPTARAYISDITTREERAGAYGLIGAAFGLGFILGPVLAGLLANFGLAAPAWGAALLAAIALVMTF 175
BLAST of NO05G05390 vs. NCBI_GenBank
Match: OFW46407.1 (hypothetical protein A3J29_17705 [Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b]) HSP 1 Score: 104.0 bits (258), Expect = 1.800e-18 Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRV 451 L +FV F+D +G G+ PLLPFY S GA+AF +GL+ L Q + + G SD+ GR+ ++L L+ S VS +A A +L V R++GG+ G +P AQ+ +AD+ E RAK +G + A G GF+ GPA+G + SR+ Sbjct: 4 LAVIFVTVFIDLLGFGIIIPLLPFYAESFGASAFAIGLLGTSFSLMQFVFSPIWGRWSDRIGRKPIILLGLMGSCVSYLTLALATSLTLVFVARILGGIAGANIPTAQAYIADVTTPENRAKGMGMVGAAFGLGFIFGPAIGGVLSRI 151
BLAST of NO05G05390 vs. NCBI_GenBank
Match: OHC76548.1 (hypothetical protein A3H92_13205 [Rhodospirillales bacterium RIFCSPLOWO2_02_FULL_58_16] >OHC78562.1 hypothetical protein A3G18_13350 [Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28]) HSP 1 Score: 104.0 bits (258), Expect = 1.800e-18 Identity = 68/190 (35.79%), Postives = 102/190 (53.68%), Query Frame = 0 Query: 306 VFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALG--LLGSRVFELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDRARRSQ 494 +F+ F+D +G G+ PLLPFY A+ +GLV+A L Q + + G +SD+ GRR V+L L + VS + A++L + R +GG+ G + A + VAD+ E RAK +G I A G GF+AGPA+G L GS F D + AA L V+ A+ +KE+ + + R S+ Sbjct: 4 LFLIVFIDLVGFGIIIPLLPFYAEHFQASPATVGLVMATYSLTQFLAAPMWGRMSDRLGRRPVLLMTLAGAAVSYIWLGMAESLWTLFAARALGGVMAGNISAAFAYVADVTTPENRAKGMGTIGAAFGLGFIAGPAIGGVLAGSDPFNADYQTPAFAAAALSTVALIMAAFILKESLSQEIRSRLAASE 193 The following BLAST results are available for this feature:
BLAST of NO05G05390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G05390 ID=NO05G05390|Name=NO05G05390|organism=Nannochloropsis oceanica|type=gene|length=4764bpback to top protein sequence of NO05G05390.1 >NO05G05390.1-protein ID=NO05G05390.1-protein|Name=NO05G05390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=727bpback to top protein sequence of NO05G05390.2 >NO05G05390.2-protein ID=NO05G05390.2-protein|Name=NO05G05390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=634bpback to top protein sequence of NO05G05390.3 >NO05G05390.3-protein ID=NO05G05390.3-protein|Name=NO05G05390.3|organism=Nannochloropsis oceanica|type=polypeptide|length=634bpback to top Synonyms
Publications
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