NO05G05390.1, NO05G05390.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G05390.1
Unique Name	NO05G05390.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2694
Alignment location	chr5:1445119..1449882 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1445119..1449882 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G05390.1 vs.
Match: EWM27858.1 (major facilitator superfamily mfs_1 [Nannochloropsis gaditana])

HSP 1 Score: 939.9 bits (2428), Expect = 4.800e-270
Identity = 519/690 (75.22%), Postives = 570/690 (82.61%), Query Frame = 0

Query:   41 LWASAAVTPATPYSLPPFLPS---SRFGRSNSRSSSSERER--RRREVGEGEVERRGGMTNRRTVAALGKIRGGASSKAKVPPSSQALAQADAKKRS-IPSSSSPATGSKTSKEAELDLGPPSTLTLKNAPPALRMLNGVFVRTDWDHNGRAHYEKVMTQDEVALAMENSSSSEEKQVVHLYWHGSQWVLHLDLDPALNYDSYLGYCKVNHRDPGRTDRLWLLREKKKWVPSPALRVHVVGRHYEGEEEALTAAAAAAALASAPTPPRLVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRVFELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDRARRSQGNIGSSTSSTSTVTTARPTPLSTPMDENVAFPILPVRLLVLNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKDLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGMLYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTILYLKSIERKRILAAE 725
            LW SA +T  T  S  P LPS   S   +S  RS + +R    R++     ++     MT R+ +  L ++RGGAS  A+V PS  A    DAKKR  + SSSSP  G+ +      DLGPPSTLT KNAP +LRM+NGVF+RT WDHNGRAHYEKVMT +E+ LA E S  +EE++VVHLYWHGSQWVLHLDLDPALNYD+YLGYCKVN RDPGRTDR WLLRE KKW+P+ +LRVHV GR YE  EE+   A+AAAALAS PTPPRLVPVF+AFFLDA+GTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQT+GCIVMGSISD+ GRRQVMLCCL+ASFVSLSLVARAKTLPQVA GRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGP LGLLGSR   LDSRGILKRAAILPA++F Y  VFIKETK +V +DR  + + +  +S +S+       P  L        + P  PVRLL+LNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIK+LFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAG+LYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPT+LYLKSIERKR+ A E
Sbjct:   35 LWTSATIT--TEMSPLPTLPSHGPSTGCKSWCRSEAWKRRDGDRQKSTTMPDIVGSLNMTGRQGIH-LARMRGGASRAARVSPSPAA----DAKKRQPVASSSSPKDGALSE-----DLGPPSTLTFKNAPSSLRMINGVFIRTAWDHNGRAHYEKVMTSEEMTLAQELSVFAEERRVVHLYWHGSQWVLHLDLDPALNYDNYLGYCKVNSRDPGRTDRSWLLRENKKWLPATSLRVHVPGRQYEKREES---ASAAAALASIPTPPRLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRGLHLDSRGILKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLASS-------PPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAAEE 702

The following BLAST results are available for this feature:

BLAST of NO05G05390.1 vs.

BLAST of NO05G05390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27858.1	4.800e-270	75.22	major facilitator superfamily mfs_1 [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G05390	NO05G05390	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G05390.1	NO05G05390.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G05390.1.cds1	NO05G05390.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds2	NO05G05390.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds3	NO05G05390.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds4	NO05G05390.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds5	NO05G05390.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds6	NO05G05390.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds7	NO05G05390.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds8	NO05G05390.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds9	NO05G05390.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds10	NO05G05390.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds11	NO05G05390.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds12	NO05G05390.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds13	NO05G05390.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G05390.1.cds14	NO05G05390.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:1445119..1449882+
coding sequence from alignment at chr5:1445119..1449882+

mRNA sequence

>NO05G05390.1 ID=NO05G05390.1|Name=NO05G05390.1|organism=Nannochloropsis oceanica|type=mRNA|length=2694bp
AGAAGACCCCCCTCACTGCGGAGCTCCTTGGGCAGGGGACAACCGACGAC
CCTTTTTCGCATTAGACTCGACGTAATGTTGTATCTTAGTCTCTCACTTT
GTGAAAATGTCAGTTGAATTGCGGAGATGGAGAAGCGGACTTTGTCCCGT
CATGGACTCCCCTTGTACTATTTCCTCCTTTGCTCTCCCTACCTCGCCTC
TCCCCCCCTTGAAGCCTGGAATGTGCGAGGTTCGTCTTCAGGACACTCAG
ACACACTCACTGCCCCGCTTCCATCTGTCTCATACCATACACAGGTAGAG
TAGAAAGGTGCGGATCCATTGGCTGCAGGCGCAAAGCTCAGGCAGGCTCT
CAATTCCTCGCGTGCTCCTGCACTTTACGCGTCACGACCACCCAACATCA
ACGGCCCCTCTCCTCTGTCCCCTCATATCTCATCCACGAGAGGGCGGTGA
TGTTTCCTTTACTCACGCTCCATCGCCTGCTTCTCGTATCGGGCCTGGGT
GCTCTTTGCGTGATCCTGGACGGCGCCACTTGTGGGAGCAGCAGAACTCC
AGCCACGAGGCGTACCTGCCTATGGGCCAGCGCAGCGGTGACGCCGGCCA
CTCCTTACTCCCTCCCTCCCTTCCTGCCCTCATCCCGTTTTGGTCGAAGT
AATAGTAGAAGTAGCAGCAGTGAAAGGGAAAGGAGAAGAAGAGAGGTCGG
TGAGGGTGAAGTAGAAAGAAGAGGAGGGATGACGAACAGGCGGACCGTGG
CGGCGTTGGGCAAGATAAGAGGCGGAGCCAGCAGCAAGGCCAAGGTGCCT
CCATCTTCGCAAGCTCTCGCTCAAGCAGACGCTAAAAAGCGCTCGATACC
TTCTTCTTCTTCCCCTGCGACCGGCAGCAAAACCAGCAAGGAGGCTGAAT
TGGATCTCGGGCCTCCATCTACCTTGACGCTGAAGAATGCGCCGCCCGCC
TTACGCATGCTCAACGGCGTGTTTGTCCGCACGGACTGGGACCACAACGG
CCGGGCCCATTACGAGAAGGTCATGACTCAGGACGAGGTGGCCCTCGCCA
TGGAGAACTCCTCCTCCTCGGAGGAAAAACAGGTTGTGCACCTCTACTGG
CACGGCTCTCAGTGGGTACTTCACCTCGACCTCGACCCCGCCCTCAACTA
CGACAGCTACTTGGGCTATTGCAAGGTCAACCACCGCGATCCCGGGCGGA
CGGACCGTCTCTGGTTGCTTCGCGAGAAGAAAAAGTGGGTGCCCTCCCCG
GCCTTGAGGGTGCATGTGGTGGGGCGACACTACGAAGGGGAGGAGGAGGC
CCTGACAGCCGCAGCGGCAGCAGCAGCCCTGGCCTCCGCCCCCACCCCTC
CTCGCCTCGTCCCCGTCTTCGTCGCTTTCTTCCTCGACGCTATCGGCACT
GGCTTGGCAAGTCCCCTTCTTCCCTTCTACATCATGAGTCTAGGCGCCAA
CGCCTTCCAGCTAGGTTTGGTACTGGCTTTCAATTATCTGGCACAGACTA
TGGGCTGCATCGTGATGGGCAGCATTTCCGATAAGTACGGCCGGCGACAG
GTGATGTTGTGCTGCTTGGTGGCCTCCTTCGTCTCCCTTTCCCTCGTGGC
CCGCGCCAAGACGCTCCCTCAGGTCGCCTTCGGCCGCGTCATCGGCGGCA
TGTTCGGTGGCTTCGTTCCCCTAGCCCAGAGCGCCGTCGCGGATTTGGTG
CCGGTGGAAGGTCGCGCCAAATTTTTGGGCAGGATCCAGGCGTGTATGGG
AGCTGGCTTCGTGGCTGGGCCGGCACTTGGACTGTTGGGCTCGCGGGTCT
TTGAATTGGACTCTCGCGGGATCCTGAAAAGGGCGGCCATCCTGCCGGCT
GTTTCCTTTTGTTATGCCTCCGTCTTCATTAAGGAAACCAAGGCCTCCGT
CCTCCTTGATCGGGCCCGCCGCAGCCAAGGAAACATAGGCAGCAGCACCA
GTAGCACCAGCACCGTGACTACCGCGCGCCCTACCCCCCTCTCTACCCCC
ATGGATGAAAATGTGGCTTTCCCTATCCTGCCTGTGCGGCTGTTGGTCCT
GAACGGCTTCTTGCTTATGTACGCCTTTTCTGTCGAGACGGTTTATGCCA
TGTTCATCAAGGACAATTTTGGGTATGGCGAGACGGCCCTCGGCGCCGTC
TTTGCCCTCAACGGCATCGCTGTCGGCTTGCTGCAAGTCTTTCTCATTAA
GGACCTGTTTGCCCGCCTAGGCAAACACGTGATGCTGGCCTTCGGCAACC
TCCTCCTGGCCCTGGGCATGGTGGGCCTCTCCCTCCTTCGCTACAAGCTC
TGGCACTTTTCCATGTTCTCCCTCCACATCATCGGCTACGCCATTTCCGA
CACTGCCCTTGCCTCCCTCATTTCCCGCTATTCGGCCCCCGAGCATCAAG
GCCGCAACCTGGGATGGAGCCACGCTGCCCAGTCCTGTGCCCGTATCATA
AGTCCGTTGGTGGCGGGCATGCTCTATGAGTGGAGCAAGGAGCCGGGTCA
TCCTTTGCCGCCCGGGGCCCTGCCCTACATTGCTGGGAGCGCTTTTCCCT
TGTTGGGCGTAATGGTGCCCACGATATTGTATTTGAAAAGCATTGAGCGA
AAGAGGATCTTGGCAGCGGAAGGAGGGTAGGATGGGGGAAGGAAAGGTTG
GGGAAGGAAAGAATAAAGTAAAAAATGCGATGATAAGCACAGCT

protein sequence of NO05G05390.1

>NO05G05390.1-protein ID=NO05G05390.1-protein|Name=NO05G05390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=727bp
MFPLLTLHRLLLVSGLGALCVILDGATCGSSRTPATRRTCLWASAAVTPA
TPYSLPPFLPSSRFGRSNSRSSSSERERRRREVGEGEVERRGGMTNRRTV
AALGKIRGGASSKAKVPPSSQALAQADAKKRSIPSSSSPATGSKTSKEAE
LDLGPPSTLTLKNAPPALRMLNGVFVRTDWDHNGRAHYEKVMTQDEVALA
MENSSSSEEKQVVHLYWHGSQWVLHLDLDPALNYDSYLGYCKVNHRDPGR
TDRLWLLREKKKWVPSPALRVHVVGRHYEGEEEALTAAAAAAALASAPTP
PRLVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQT
MGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGG
MFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRV
FELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDRARRSQGNIGSST
SSTSTVTTARPTPLSTPMDENVAFPILPVRLLVLNGFLLMYAFSVETVYA
MFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKDLFARLGKHVMLAFGN
LLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQ
GRNLGWSHAAQSCARIISPLVAGMLYEWSKEPGHPLPPGALPYIAGSAFP
LLGVMVPTILYLKSIERKRILAAEGG*

mRNA from alignment at chr5:1445119..1449882+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G05390.1 ID=NO05G05390.1|Name=NO05G05390.1|organism=Nannochloropsis oceanica|type=mRNA|length=4764bp|location=Sequence derived from alignment at chr5:1445119..1449882+ (Nannochloropsis oceanica)
AGAAGACCCCCCTCACTGCGGAGCTCCTTGGGCAGGGGACAACCGACGAC
CCTTTTTCGCATTAGACTCGACGTAATGTTGTATCTTAGTCTCTCACTTT
GTGAAAATGTCAGTTGAATTGCGGAGATGGAGAAGCGGACTTTGTCCCGT
CATGGACTCCCCTTGTACTATTTCCTCCTTTGCTCTCCCTACCTCGCCTC
TCCCCCCCTTGAAGCCTGGAATGTGCGAGGTTCGTCTTCAGGACACTCAG
ACACACTCACTGCCCCGCTTCCATCTGTCTCATACCATACACAGGTAGAG
TAGAAAGGTGCGGATCCATTGGCTGCAGGCGCAAAGCTCAGGCAGGCTCT
CAATTCCTCGCGTGCTCCTGCACTTTACGCGTCACGACCACCCAACATCA
ACGGCCCCTCTCCTCTGTCCCCTCATATCTCATCCACGAGAGGGCGGTGA
TGTTTCCTTTACTCACGCTCCATCGCCTGCTTCTCGTATCGGGCCTGGGT
GCTCTTTGCGTGATCCTGGACGGCGCCACTTGTGGGAGCAGCAGAACTCC
AGCCACGAGGCGTACCTGCCTATGGGCCAGCGCAGCGGTGACGCCGGCCA
CTCCTTACTCCCTCCCTCCCTTCCTGCCCTCATCCCGTTTTGGTCGAAGT
AATAGTAGAAGTAGCAGCAGTGAAAGGGAAAGGAGAAGAAGAGAGGTCGG
TGAGGGTGAAGTAGAAAGAAGAGGAGGGATGACGAACAGGCGGACCGTGG
CGGCGTTGGGCAAGATAAGAGGCGGAGCCAGCAGCAAGGCCAAGGTGCCT
CCATCTTCGCAAGCTCTCGCTCAAGCAGACGGTACGTTTTTAATTCCAGA
ATGGGAGTAGAAGGAGGGAAGGAGGGTGGCCCGCGCAAGCGACCATCATT
CTTCTTACGCTCACACTCACACACACACCTACACCCCACTTTCCTAGCTA
AAAAGCGCTCGATACCTTCTTCTTCTTCCCCTGCGACCGGCAGCAAAACC
AGCAAGGAGGCTGAATTGGATCTCGGGCCTCCATCTACCTTGACGCTGAA
GAATGCGCCGCCCGCCTTACGTACGTGCCCTTACTCTCCTATGCACTAAC
AACTCTCTTTGGAGTTGCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCCCCTTCTTCTTCAGTCCTTCTTTTTCTATCCTCCCCTTCACCA
TCGCTCCCTCCCTCCCTCCCTCTCTCCCTCTTTACCAGGCATGCTCAACG
GCGTGTTTGTCCGCACGGACTGGGACCACAACGGCCGGGCCCATTACGAG
AAGGTCATGACTCAGGACGAGGTGGCCCTCGCCATGGTAAGACTCCATAC
CCCCCCCGTCCTTCCCTCCCTTCTTCCCTTTCATTGATTCGAGGCTATGC
TGCTTGGCCCCCTTCTTCACTTGTCTCTGGTGCCGCCATTCCCTCCCTCC
CTCCCCCCCCCTCTCCAGGAGAACTCCTCCTCCTCGGAGGAAAAACAGGT
TGTGCACCTCTACTGGCACGGCTCTCAGTGGGTACTTCACCTCGACCTCG
ACCCCGCCCTCAACTACGACAGCTACTTGGGCTATTGCAAGGTCAGGAAG
GGACGGAGGGAAGGACGGAGGAAGGCCTGCCTGTAGAGATTCTTCATCCA
TGTATCCAGACATCGTCGTGACGCGTAACACCCCTTTGCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTTTCCTTCAGGTCAACCACCGCGATCCC
GGGCGGACGGACCGTCTCTGGTTGCTTCGCGAGAAGAAAAAGTGGGTGCC
CTCCCCGGCCTTGAGGGTGCATGTGGTGGGGCGACACTACGAAGGGGAGG
AGGTAGGTTGGAGGGAGGGAGGGAGGGAGGGGGAGTTGAAGGGAACTGAC
GCCAATCCGTCGTAAAATACTCACCTTTTCTCCTTTACTTGACTTAATCT
TTTTGCAGGAGGCCCTGACAGCCGCAGCGGCAGCAGCAGCCCTGGCCTCC
GCCCCCACCCCTCCTCGCCTCGTCCCCGTCTTCGTCGCTTTCTTCCTCGA
CGCTATCGGCACTGGTACGTGAGGAGGGCGGGGGGAGAGGAGGGATGGAG
GGATGGAGGGAAGGAAGAAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGTGAAGATGTGGACGAGGATATTACGGAGAGACTACCGCCGGCTT
TTTTGGCATTGTTCATTTGTGTAACTTCATTGATTCATTTTGGGATTTAG
ATCATTCATGTATTCATTGAATGAATAACCCATCTACTCGCACAGGCTTG
GCAAGTCCCCTTCTTCCCTTCTACATCATGAGTCTAGGCGCCAACGCCTT
CCAGCTAGGTGCGGAGCACATGATCCGATCTCTCCTTTCCTCCTTCCGTC
CCTCCCTCCCTTTCTCCCTCCTTCCTTCCCCTGTCACAAGGAGTGCTCAC
ATTCCCCACAATTCTGGACGTTCGCCTTGACCTCCCTCTCTTCCCAGGTT
TGGTACTGGCTTTCAATTATCTGGCACAGACTATGGGCTGCATCGTGATG
GGCAGCATTTCCGATAAGTACGGCCGGCGACAGGTGCGGCGGAGGGAAGG
AGGGAAGGAGGGAAGGGAAGCTGCTGATTGATTCGCTGTGGTTTAGGCGA
ATGTCCACCTCACTTTTCTATTCCTATTCTTTTTGATATTTGCTTCCCTC
CCGCGCCGCAGGTGATGTTGTGCTTCCACCTCACTTTTCTATTCCTATTC
TTTTTGATATTTTCTTCCCTCCCGCGCCGCAGGTGATGTTGTGCTTCCAC
CTCACTTTTCTATTCTTATTCTTTTTGATATTTGCTTCCCTCCCGCGCCG
CAGGTGATGTTGTGCTGCTTGGTGGCCTCCTTCGTCTCCCTTTCCCTCGT
GGCCCGCGCCAAGACGCTCCCTCAGGTCGCCTTCGGCCGCGTCATCGGTA
TGGAAGGATGAGAGGGATGGACGCAGGGAGGGAGGAACAGAGAATAAATT
CATGGGAAGTGCCTGGATGATTCGTTCTGAGTAAGAGGTCCTCTGGGCCC
CCTACACTTGATCCATACACCCATTACCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCAGGCGGCATGTTCGGTGGCTTCGTTCCCCTAGCCCAGAGCG
CCGTCGCGGATTTGGTGCCGGTGGAAGGTCGCGCCAAATTTTTGGGCAGG
ATCCAGGTACGTAGGATGGAAGGAGGAAAGGAGGGAGGGAAGGAACGGGC
AGAGATAGAGTGAGGAGTGCTCTCTGTCTCGTACTGTCCCTGCTGCCATG
AGGACTTCGGGTTTTTGTTTGAGTGTTTACCCCCTTCCTCTCTTCCCTCC
TTTCTCCCCCATTCCCTCCCTGCATAGGCGTGTATGGGAGCTGGCTTCGT
GGCTGGGCCGGCACTTGGACTGTTGGGCTCGCGGGTCTTTGAATTGGACT
CTCGCGGGGTAAGGAGGGGGGGAGGAAGGGTTCAAGAGAGAACATTAGGG
GAAGGGCAGTGCGAGCGAGTGAAAAAGTTTTGTCTCGTTGTTTTCAACAG
CAACGAGTTTGAATTTGGAAGGAAAGCTGAGACTCTTTTTTATCTTTCCA
CTTCTCCTGCACTCACTCGCTCCCTCCCTCTCTCCATCGTTCATTTCTTT
CCTCCCGTCCAGATCCTGAAAAGGGCGGCCATCCTGCCGGCTGTTTCCTT
TTGTTATGCCTCCGTCTTCATTAAGGAAACCAAGGCCTCCGTCCTCCTTG
ATCGGGCCCGCCGCAGCCAAGGAAACATAGGCAGCAGCACCAGTAGCACC
AGCACCGTGACTACCGCGCGCCCTACCCCCCTCTCTACCCCCATGGATGA
AAATGTGGCTTTCCCTATCCTGCCTGTGCGGCTGTTGGTCCTGAACGGCT
TCTTGCTTATGTACGCCTTTTCTGTCGAGACGGTTTATGCCATGTTCATC
AAGGTCCGCGAGGAGGGCGTTGGGAAGGGAGAGGGGAGGAGTGAGCAGGA
CATGTGTTGGTGGATCAATAGCTCCATTTCTCACGACACATCTTTCTCGC
TTTTCTCCTTCTCTGTCCTCCTCTCGATGTACAGGACAATTTTGGGTATG
GCGAGACGGCCCTCGGCGCCGTCTTTGCCCTCAACGGCATCGCTGTCGGC
TTGCTGCAAGTCTTTCTCATTAAGGACCTGTTTGCCCGCCTAGGTACATG
AGAGGGGGAAAGAAAAATGACATAGACACAAGTGGAAACACAATCTTGTC
CTCGCTTTTACTAATGTCCTCTCTTCCAACCCTTCACCAGGCAAACACGT
GATGCTGGCCTTCGGCAACCTCCTCCTGGCCCTGGGCATGGTGGGCCTCT
CCCTCCTTCGCTACAAGCTCTGGCACTTTTCCATGTTCTCCCTCCACATC
ATCGGCTACGCCATTTCCGACACTGCCCTTGCCTCCCTCATTTCCCGCTA
TTCGGCCCCCGAGCATCAAGGCCGCAACCTGGGATGGAGCCACGCTGCCC
AGTCCTGTGCCCGTATCATAAGTCCGTTGGTGGCGGGCATGCTCTATGAG
TGGAGCAAGGAGCCGGGTCATCCTTTGCCGCCCGGGGCCCTGCCCTACAT
TGCTGGGAGCGCTTTTCCCTTGTTGGGCGTAATGGTGCCCACGATATTGT
ATTTGAAAAGCATTGAGCGAAAGAGGATCTTGGCAGCGGAAGGAGGGTAG
GATGGGGGAAGGAAAGGTTGGGGAAGGAAAGAATAAAGTAAAAAATGCGA
TGATAAGCACAGCT

Coding sequence (CDS) from alignment at chr5:1445119..1449882+

>NO05G05390.1 ID=NO05G05390.1|Name=NO05G05390.1|organism=Nannochloropsis oceanica|type=CDS|length=2181bp|location=Sequence derived from alignment at chr5:1445119..1449882+ (Nannochloropsis oceanica)
ATGTTTCCTTTACTCACGCTCCATCGCCTGCTTCTCGTATCGGGCCTGGG
TGCTCTTTGCGTGATCCTGGACGGCGCCACTTGTGGGAGCAGCAGAACTC
CAGCCACGAGGCGTACCTGCCTATGGGCCAGCGCAGCGGTGACGCCGGCC
ACTCCTTACTCCCTCCCTCCCTTCCTGCCCTCATCCCGTTTTGGTCGAAG
TAATAGTAGAAGTAGCAGCAGTGAAAGGGAAAGGAGAAGAAGAGAGGTCG
GTGAGGGTGAAGTAGAAAGAAGAGGAGGGATGACGAACAGGCGGACCGTG
GCGGCGTTGGGCAAGATAAGAGGCGGAGCCAGCAGCAAGGCCAAGGTGCC
TCCATCTTCGCAAGCTCTCGCTCAAGCAGACGCTAAAAAGCGCTCGATAC
CTTCTTCTTCTTCCCCTGCGACCGGCAGCAAAACCAGCAAGGAGGCTGAA
TTGGATCTCGGGCCTCCATCTACCTTGACGCTGAAGAATGCGCCGCCCGC
CTTACGCATGCTCAACGGCGTGTTTGTCCGCACGGACTGGGACCACAACG
GCCGGGCCCATTACGAGAAGGTCATGACTCAGGACGAGGTGGCCCTCGCC
ATGGAGAACTCCTCCTCCTCGGAGGAAAAACAGGTTGTGCACCTCTACTG
GCACGGCTCTCAGTGGGTACTTCACCTCGACCTCGACCCCGCCCTCAACT
ACGACAGCTACTTGGGCTATTGCAAGGTCAACCACCGCGATCCCGGGCGG
ACGGACCGTCTCTGGTTGCTTCGCGAGAAGAAAAAGTGGGTGCCCTCCCC
GGCCTTGAGGGTGCATGTGGTGGGGCGACACTACGAAGGGGAGGAGGAGG
CCCTGACAGCCGCAGCGGCAGCAGCAGCCCTGGCCTCCGCCCCCACCCCT
CCTCGCCTCGTCCCCGTCTTCGTCGCTTTCTTCCTCGACGCTATCGGCAC
TGGCTTGGCAAGTCCCCTTCTTCCCTTCTACATCATGAGTCTAGGCGCCA
ACGCCTTCCAGCTAGGTTTGGTACTGGCTTTCAATTATCTGGCACAGACT
ATGGGCTGCATCGTGATGGGCAGCATTTCCGATAAGTACGGCCGGCGACA
GGTGATGTTGTGCTGCTTGGTGGCCTCCTTCGTCTCCCTTTCCCTCGTGG
CCCGCGCCAAGACGCTCCCTCAGGTCGCCTTCGGCCGCGTCATCGGCGGC
ATGTTCGGTGGCTTCGTTCCCCTAGCCCAGAGCGCCGTCGCGGATTTGGT
GCCGGTGGAAGGTCGCGCCAAATTTTTGGGCAGGATCCAGGCGTGTATGG
GAGCTGGCTTCGTGGCTGGGCCGGCACTTGGACTGTTGGGCTCGCGGGTC
TTTGAATTGGACTCTCGCGGGATCCTGAAAAGGGCGGCCATCCTGCCGGC
TGTTTCCTTTTGTTATGCCTCCGTCTTCATTAAGGAAACCAAGGCCTCCG
TCCTCCTTGATCGGGCCCGCCGCAGCCAAGGAAACATAGGCAGCAGCACC
AGTAGCACCAGCACCGTGACTACCGCGCGCCCTACCCCCCTCTCTACCCC
CATGGATGAAAATGTGGCTTTCCCTATCCTGCCTGTGCGGCTGTTGGTCC
TGAACGGCTTCTTGCTTATGTACGCCTTTTCTGTCGAGACGGTTTATGCC
ATGTTCATCAAGGACAATTTTGGGTATGGCGAGACGGCCCTCGGCGCCGT
CTTTGCCCTCAACGGCATCGCTGTCGGCTTGCTGCAAGTCTTTCTCATTA
AGGACCTGTTTGCCCGCCTAGGCAAACACGTGATGCTGGCCTTCGGCAAC
CTCCTCCTGGCCCTGGGCATGGTGGGCCTCTCCCTCCTTCGCTACAAGCT
CTGGCACTTTTCCATGTTCTCCCTCCACATCATCGGCTACGCCATTTCCG
ACACTGCCCTTGCCTCCCTCATTTCCCGCTATTCGGCCCCCGAGCATCAA
GGCCGCAACCTGGGATGGAGCCACGCTGCCCAGTCCTGTGCCCGTATCAT
AAGTCCGTTGGTGGCGGGCATGCTCTATGAGTGGAGCAAGGAGCCGGGTC
ATCCTTTGCCGCCCGGGGCCCTGCCCTACATTGCTGGGAGCGCTTTTCCC
TTGTTGGGCGTAATGGTGCCCACGATATTGTATTTGAAAAGCATTGAGCG
AAAGAGGATCTTGGCAGCGGAAGGAGGGTAG

Synonyms

Publications