NO05G05310, NO05G05310 (gene) Nannochloropsis oceanica

Overview
NameNO05G05310
Unique NameNO05G05310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4786
Alignment locationchr5:1411253..1416038 +

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Properties
Property NameValue
DescriptionER membrane protein complex subunit 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1411253..1416038 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0072546ER membrane protein complex
GO:0072546ER membrane protein complex
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011047Quinonprotein_ADH-like_supfam
IPR026895EMC1
IPR011678DUF1620
Homology
BLAST of NO05G05310 vs. NCBI_GenBank
Match: EWM27878.1 (protein of unknown function DUF1620 [Nannochloropsis gaditana])

HSP 1 Score: 928.7 bits (2399), Expect = 1.600e-266
Identity = 543/1066 (50.94%), Postives = 661/1066 (62.01%), Query Frame = 0
Query:    2 RFSFFRPCFLLLFSTCCILLLCSTQALHEEDAGKFDWHKSLLGPVTQARFEGNFLLLASSLGAVAVAHAGNTDGSLLWRQVIPLASPTLLPPAELRGLE-GKTAAVEILEVALHPQKRFVLALSRDPSTTLLDLWAWRLFDGNLLWHASLPSSPSPSS---SSSPSGYLALLPARVAVVCGKGGRTVFVNVDNGLCDGEGPSLELEAVVGVV----ATEGGVVVVGEGKDRRAQALLVKMGEGKAEKVKAVATSDSGLLAHGTPSLHAFARPAPAHGLSVLLRTSPSPSSSSSVADLQLVTPTLHKTTTHGALLSPIPSSRPP--SSSCLVLSEAGAVVELSVADGKMKQRLISPXXXXXXXXXXXAASAGPYVFRGKGGKEGGKERGVEVLRIADGQVEGRLTPPDKRSLRAMWATVK--XXXXXXXXXXXXXXXXXXDEAETLALKDGKDKTIWQREEALADVSQVLIADYLPKEQGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHFGLXXXXXXXXXXXXXXXXLLSSDRGQVLWTADLEEGEGGXXXXXXXXXRWRMVLQGEEVLVVGDGAKGSAVWLDVLTGEVTAAVADLGLSPSSPPSSLLFFPLDLSSFSSSSSLPPSARLLLIDASDAASHRGRFLDKGSCSLSEEEGEGGKEDGPANV--SKPIYYHTLSTPSSGGAFLQTFRLIIPASSPASPSWPFVSSPIGAAALPSESERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHLLALASTASLPP-------SPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPT-LPPSKAEKAEGLPPYSAHLPLLPSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRAAQAKTLREAWA 1046
            R S F     L F    + L+ S  AL+EEDAGKFDWHKSLLGPV  ARFEGNFLLLASS GAVAVA A N+DGSLLWRQVIPLA+P  LP  +   ++  +  AV++LE+ LHPQKR V+AL+RDPST  L +WAWRLFDGNL+WH ++P+S  P      +   G+LAL P  V  V G+ G   F++  +G    + P++EL AV GVV     TE GVVVVGEG D +AQA LV++G  KAEK+K+V+ SD GL++HGTPSLHAFARPA                   + AD+QLV P+  K T HG L SPIPSS P   S+SCLVLS++GAVVE+++  GK  QRL++P           A  AGPYV RG    E  +  GVEV R+ DGQ  GR+    +RSLR +WA ++                    D+AETL L+   D+ +W REE LADV+QVLI D+ P  +G                                         HFGL                LLSS  G +LWT DL   EG          RWRMV QG+EVL+VG+G +G A+WLD++TG   A++  LGL+    P                            D  +A  HR RFLD  SC+   +   GG+E G       +PI+YHTLSTPSSGGA LQT+RL  P+S+P+SP+WPF S+ +GA++LPS SE VV+ +YPD RET T P+S PLGDGALLL+YLNP+L+ALASTASLPP                                             L+RVSHFH QGPV+MR+ ENWL+YSYWNC+AQRTE+GSIT YDGFID+KG+G+ T+PEFK R SS DGD  PVALQQTF+FPHPIL LGSTLTARGITTKALLVG+EPGQ+ LLDRR LDPRRPT LP SK EKAEGL PY+ HLP+LP HV+TYNH L            LESTTLLLG+GDLDL+FTRL+PS KPFDLLP+TFNHVLVS+VL++SVVGV F+G+AAQAK LREAWA
Sbjct:    8 RISIFVSFMYLSF----LFLIPSVYALYEEDAGKFDWHKSLLGPVCHARFEGNFLLLASSYGAVAVASASNSDGSLLWRQVIPLAAPVALPVRDGGTMDKDEKPAVKVLELVLHPQKRLVMALTRDPSTAALGVWAWRLFDGNLMWHVTVPASGVPLGKRVKAKEGGFLALFPDTVGAVDGETGEIYFLSAVDGTRIWKAPAIELMAVTGVVPVDGGTEKGVVVVGEGSDGKAQAFLVRLGGEKAEKIKSVSFSDGGLISHGTPSLHAFARPAXXXXXXXXXXXXXXXXXXXA-ADMQLVNPSGAKATPHGVLSSPIPSSHPSSLSASCLVLSDSGAVVEITLTQGKFMQRLVAP---PSSPSLPLAFRAGPYVLRG----EENQGPGVEVFRVVDGQSVGRVR--GRRSLRGLWAGIRGGWREEEKEGRESDLLVLTVDKAETLVLQTMDDRLVWLREECLADVAQVLIVDHRPPAEG--EKRSGTEDVTEALATSPLFEKLLSVVLPPSPSSSSVRDPHFGLTKILLFLCAPSSRLIALLSSHGGTILWTRDLPSVEG------REGARWRMVQQGDEVLLVGEGGEGLAIWLDIVTGHEIASLPTLGLT----PXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRNATGHRARFLDGSSCA---QGALGGREAGTEESLGDRPIFYHTLSTPSSGGASLQTYRLFKPSSAPSSPNWPFQSAVVGASSLPSPSELVVSTAYPDVRETMTAPSSHPLGDGALLLKYLNPYLVALASTASLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYRVSHFHVQGPVRMRLVENWLIYSYWNCKAQRTEIGSITLYDGFIDRKGLGLFTSPEFKERTSSFDGDASPVALQQTFLFPHPILTLGSTLTARGITTKALLVGFEPGQILLLDRRLLDPRRPTALPLSKTEKAEGLLPYAPHLPVLPPHVVTYNHTLHGLHSLYTAPSSLESTTLLLGVGDLDLYFTRLYPSHKPFDLLPDTFNHVLVSLVLLISVVGVGFLGKAAQAKALREAWA 1044          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: XP_005855499.1 (hypothetical protein NGA_0248902 [Nannochloropsis gaditana CCMP526] >XP_005856149.1 hypothetical protein NGA_0248901 [Nannochloropsis gaditana CCMP526] >EKU20217.1 hypothetical protein NGA_0248901 [Nannochloropsis gaditana CCMP526] >EKU20857.1 hypothetical protein NGA_0248902 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 430.3 bits (1105), Expect = 1.800e-116
Identity = 271/594 (45.62%), Postives = 338/594 (56.90%), Query Frame = 0
Query:    2 RFSFFRPCFLLLFSTCCILLLCSTQALHEEDAGKFDWHKSLLGPVTQARFEGNFLLLASSLGAVAVAHAGNTDGSLLWRQVIPLASPTLLPPAELRGLE-GKTAAVEILEVALHPQKRFVLALSRDPSTTLLDLWAWRLFDGNLLWHASLPSSPSPSS---SSSPSGYLALLPARVAVVCGKGGRTVFVNVDNGLCDGEGPSLELEAVVGVV----ATEGGVVVVGEGKDRRAQALLVKMGEGKAEKVKAVATSDSGLLAHGTPSLHAFARPAPAHGLSVLLRTSPSPSSSSSVADLQLVTPTLHKTTTHGALLSPIPSSRPP--SSSCLVLSEAGAVVELSVADGKMKQRLISPXXXXXXXXXXXAASAGPYVFRGKGGKEGGKERGVEVLRIADGQVEGRLTPPDKRSLRAMWATVK--XXXXXXXXXXXXXXXXXXDEAETLALKDGKDKTIWQREEALADVSQVLIADYLPKEQGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHFGLXXXXXXXXXXXXXXXXLLSSDRGQVLWTADLEEGEGGXXXXXXXXXRWRMVLQGEEVLVVGDGAKGSAVW 584
            R S F     L F    + L+ S  AL+EEDAGKFDWHKSLLGPV  ARFEGNFLLLASS GAVAVA A N+DGSLLWRQVIPLA+P  LP  +   ++  +  AV++LE+ LHPQKR V+AL+RDPST  L +WAWRLFDGNL+WH ++P+S  P      +   G+LAL P  V  V G+ G   F++  +G    + P++EL AV GVV     TE GVVVVGEG D +AQA LV++G  KAEK+K+V+ SD GL++HGTPSLHAFARPA                   + AD+QLV P+  K T HG L SPIPSS P   S+SCLVLS++GAVVE+++  GK  QRL++P           A  AGPYV RG    E  +  GVEV R+ DGQ  GR+    +RSLR +WA ++                    D+AETL L+   D+ +W REE LADV+QVLI D+ P  +G                                         HFGL                LLSS  G +LWT DL   EG          RWRMV QG+EVL+VG+G +G A+W
Sbjct:    8 RISIFVSFMYLSF----LFLIPSVYALYEEDAGKFDWHKSLLGPVCHARFEGNFLLLASSYGAVAVASASNSDGSLLWRQVIPLAAPVALPVRDGGTMDKDEKPAVKVLELVLHPQKRLVMALTRDPSTAALGVWAWRLFDGNLMWHVTVPASGVPLGKRVKAKEGGFLALFPDTVGAVDGETGEIYFLSAVDGTRIWKAPAIELMAVTGVVPVDGGTEKGVVVVGEGSDGKAQAFLVRLGGEKAEKIKSVSFSDGGLISHGTPSLHAFARPAXXXXXXXXXXXXXXXXXXXA-ADMQLVNPSGAKATPHGVLSSPIPSSHPSSLSASCLVLSDSGAVVEITLTQGKFMQRLVAP---PSSPSLPLAFRAGPYVLRG----EENQGPGVEVFRVVDGQSVGRVR--GRRSLRGLWAGIRGGWREEEKEGRESDLLVLTVDKAETLVLQTMDDRLVWLREECLADVAQVLIVDHRPPAEG--EKRSGTEDVTEALATSPLFEKLLSVVLPPSPSSSSVRDPHFGLTKILLFLCAPSSRLIALLSSHGGTILWTRDLSSVEG------REGARWRMVQQGDEVLLVGEGGEGLAIW 579          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: CBJ28998.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 244.2 bits (622), Expect = 1.800e-60
Identity = 147/374 (39.30%), Postives = 216/374 (57.75%), Query Frame = 0
Query:  674 IYYHTLSTPSSGGAFLQTFRLIIPASSPAS--PSWPFVSSPIGAAALPSESERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHLLALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKAEGLPPYSAHLPLLPSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRAAQAKTLREAWA 1046
            ++YH+LS        L++F ++  A+   S     P  S+ + +        +VVA +YPD R+   TP    LGD +LL++Y+NP L A A+          ++  ++    GK +       + VT++D V+GRVLHR+SH  A  PV M++ E+W+VYSYW+  + RTE+ +++ Y+G IDK G+     PE+K   SS +  + P+ LQ+TF+FP P+ ALG TLT  GIT+K +LVG   GQV  LDRRFLDPRRP   P+K EK E L  Y  +LP++P+ VL+Y+ ++            LEST+L+L LG LD+F  R+ P SK +D+L   FN+ L+++VL      V    R A  K L E WA
Sbjct:  705 LFYHSLSETG-----LESFSVVPSATGGDSDKDEGPLGSATVASVPFNPTRSKVVATAYPDGRDGVQTPAH-TLGDDSLLIKYINPRLFAFATLCPEEAESEEWAGGDAGQLNGKGQE------LTVTLVDYVSGRVLHRISHKGAAEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRV-PIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAIGQVVSLDRRFLDPRRPQEEPTKTEKEEKLIQYQPYLPVVPTQVLSYHKVIERVDRVLTEPTGLESTSLVLALG-LDIFGARVAP-SKTYDMLDPNFNYALLALVLGAMATAVGVANRLAAHKRLSEQWA 1063          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: XP_008901756.1 (hypothetical protein PPTG_08786 [Phytophthora parasitica INRA-310] >ETI52376.1 hypothetical protein F443_04467 [Phytophthora parasitica P1569] >ETL98822.1 hypothetical protein L917_04184 [Phytophthora parasitica] >ETN12710.1 hypothetical protein PPTG_08786 [Phytophthora parasitica INRA-310] >ETP50098.1 hypothetical protein F442_04499 [Phytophthora parasitica P10297])

HSP 1 Score: 219.5 bits (558), Expect = 4.700e-53
Identity = 134/330 (40.61%), Postives = 197/330 (59.70%), Query Frame = 0
Query:  718 LPSESERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHLLALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKAEGLPPYSAHLPLL--PSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRA-AQAKTLREAW 1045
            LP E ++V+A S+        +  ++  GD +LL++YLNP+L  LA+ AS P            SEG      E  S ++V+++D+VAGR++HR  H HA GPV+M   ENWLVYSYWN + +RTE+ S++ +DG +    +     P + +  SS D   P V LQ++F++P  I +LG T+TA GIT +++LVG E GQ+F L R F+DPR+P  P +  E+AEGL  YS  +P+   P  +LTYN  +            LESTTL+   G LD+F+ R+ P +K FDLLP  FNH ++ ++L ++ + V F  +A AQ K L+ AW
Sbjct:  686 LPRE-QQVIATSHHHDHSVVDSAVTI-TGDDSLLIKYLNPNLFGLATIASEP------------SEGD----NEATSVLHVSLIDSVAGRIIHRARHSHATGPVRMVQSENWLVYSYWNSKEKRTEMVSLSLFDGAVGMHSLNPWKRPSWTSSRSSFDSKAPFV-LQKSFIYPTKITSLGVTVTAHGITPQSVLVGMETGQIFKLTRNFIDPRQPEKPLTPEEQAEGLMMYSPLVPVYNRPQAMLTYNRTVENLNSISTAAAELESTTLVFAHG-LDMFYVRMTP-AKSFDLLPSDFNHEML-ILLCLTFLAVTFGAKALAQRKALQTAW 993          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: ETK92263.1 (hypothetical protein L915_04340 [Phytophthora parasitica] >ETO81149.1 hypothetical protein F444_04487 [Phytophthora parasitica P1976])

HSP 1 Score: 219.5 bits (558), Expect = 4.700e-53
Identity = 134/330 (40.61%), Postives = 197/330 (59.70%), Query Frame = 0
Query:  718 LPSESERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHLLALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKAEGLPPYSAHLPLL--PSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRA-AQAKTLREAW 1045
            LP E ++V+A S+        +  ++  GD +LL++YLNP+L  LA+ AS P            SEG      E  S ++V+++D+VAGR++HR  H HA GPV+M   ENWLVYSYWN + +RTE+ S++ +DG +    +     P + +  SS D   P V LQ++F++P  I +LG T+TA GIT +++LVG E GQ+F L R F+DPR+P  P +  E+AEGL  YS  +P+   P  +LTYN  +            LESTTL+   G LD+F+ R+ P +K FDLLP  FNH ++ ++L ++ + V F  +A AQ K L+ AW
Sbjct:  686 LPRE-QQVIATSHHHDHSVVDSAVTI-TGDDSLLIKYLNPNLFGLATIASEP------------SEGD----NEATSVLHVSLIDSVAGRIIHRTRHSHATGPVRMVQSENWLVYSYWNSKEKRTEMVSLSLFDGAVGMHSLNPWKRPSWTSSRSSFDSKAPFV-LQKSFIYPTKITSLGVTVTAHGITPQSVLVGMETGQIFKLTRNFIDPRQPEKPLTPEEQAEGLMMYSPLVPVYNRPQAMLTYNRTVENLNSISTAAAELESTTLVFAHG-LDMFYVRMTP-AKSFDLLPSDFNHEML-ILLCLTFLAVTFGAKALAQRKALQTAW 993          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: ETM51987.1 (hypothetical protein L914_04285 [Phytophthora parasitica])

HSP 1 Score: 219.5 bits (558), Expect = 4.700e-53
Identity = 134/330 (40.61%), Postives = 197/330 (59.70%), Query Frame = 0
Query:  718 LPSESERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHLLALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKAEGLPPYSAHLPLL--PSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRA-AQAKTLREAW 1045
            LP E ++V+A S+        +  ++  GD +LL++YLNP+L  LA+ AS P            SEG      E  S ++V+++D+VAGR++HR  H HA GPV+M   ENWLVYSYWN + +RTE+ S++ +DG +    +     P + +  SS D   P V LQ++F++P  I +LG T+TA GIT +++LVG E GQ+F L R F+DPR+P  P +  E+AEGL  YS  +P+   P  +LTYN  +            LESTTL+   G LD+F+ R+ P +K FDLLP  FNH ++ ++L ++ + V F  +A AQ K L+ AW
Sbjct:  686 LPRE-QQVIATSHHHDHSVVDSAVTI-TGDDSLLIKYLNPNLFGLATIASEP------------SEGD----NEATSVLHVSLIDSVAGRIIHRTRHSHATGPVRMVQSENWLVYSYWNSKEKRTEMVSLSLFDGAVGMHSLNPWKRPSWTSSRSSFDSKAPFV-LQKSFIYPTKITSLGVTVTAHGITPQSVLVGMETGQIFKLTRNFIDPRQPEKPLTPEEQAEGLMMYSPLVPVYNRPQAMLTYNRTVENLNSISTAAAELESTTLVFAHG-LDMFYVRMTP-AKSFDLLPSDFNHEML-ILLCLTFLAVTFGAKALAQRKALQTAW 993          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: KUF96050.1 (Superoxide dismutase [Phytophthora nicotianae])

HSP 1 Score: 219.5 bits (558), Expect = 4.700e-53
Identity = 134/330 (40.61%), Postives = 197/330 (59.70%), Query Frame = 0
Query:  718 LPSESERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHLLALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKAEGLPPYSAHLPLL--PSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRA-AQAKTLREAW 1045
            LP E ++V+A S+        +  ++  GD +LL++YLNP+L  LA+ AS P            SEG      E  S ++V+++D+VAGR++HR  H HA GPV+M   ENWLVYSYWN + +RTE+ S++ +DG +    +     P + +  SS D   P V LQ++F++P  I +LG T+TA GIT +++LVG E GQ+F L R F+DPR+P  P +  E+AEGL  YS  +P+   P  +LTYN  +            LESTTL+   G LD+F+ R+ P +K FDLLP  FNH ++ ++L ++ + V F  +A AQ K L+ AW
Sbjct:  281 LPRE-QQVIATSHHHDHSVVDSAVTI-TGDDSLLIKYLNPNLFGLATIASEP------------SEGD----NEATSVLHVSLIDSVAGRIIHRARHSHATGPVRMVQSENWLVYSYWNSKEKRTEMVSLSLFDGAVGMHSLNPWKRPSWTSSRSSFDSKAPFV-LQKSFIYPTKITSLGVTVTAHGITPQSVLVGMETGQIFKLTRNFIDPRQPEKPLTPEEQAEGLMMYSPLVPVYNRPQAMLTYNRTVENLNSISTAAAELESTTLVFAHG-LDMFYVRMTP-AKSFDLLPSDFNHEML-ILLCLTFLAVTFGAKALAQRKALQTAW 588          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: KUF98786.1 (ER membrane protein complex subunit 1 [Phytophthora nicotianae])

HSP 1 Score: 219.5 bits (558), Expect = 4.700e-53
Identity = 134/330 (40.61%), Postives = 197/330 (59.70%), Query Frame = 0
Query:  718 LPSESERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHLLALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKAEGLPPYSAHLPLL--PSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRA-AQAKTLREAW 1045
            LP E ++V+A S+        +  ++  GD +LL++YLNP+L  LA+ AS P            SEG      E  S ++V+++D+VAGR++HR  H HA GPV+M   ENWLVYSYWN + +RTE+ S++ +DG +    +     P + +  SS D   P V LQ++F++P  I +LG T+TA GIT +++LVG E GQ+F L R F+DPR+P  P +  E+AEGL  YS  +P+   P  +LTYN  +            LESTTL+   G LD+F+ R+ P +K FDLLP  FNH ++ ++L ++ + V F  +A AQ K L+ AW
Sbjct:  791 LPRE-QQVIATSHHHDHSVVDSAVTI-TGDDSLLIKYLNPNLFGLATIASEP------------SEGD----NEATSVLHVSLIDSVAGRIIHRARHSHATGPVRMVQSENWLVYSYWNSKEKRTEMVSLSLFDGAVGMHSLNPWKRPSWTSSRSSFDSKAPFV-LQKSFIYPTKITSLGVTVTAHGITPQSVLVGMETGQIFKLTRNFIDPRQPEKPLTPEEQAEGLMMYSPLVPVYNRPQAMLTYNRTVENLNSISTAAAELESTTLVFAHG-LDMFYVRMTP-AKSFDLLPSDFNHEML-ILLCLTFLAVTFGAKALAQRKALQTAW 1098          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: XP_002902249.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56921.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 217.6 bits (553), Expect = 1.800e-52
Identity = 134/330 (40.61%), Postives = 196/330 (59.39%), Query Frame = 0
Query:  718 LPSESERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHLLALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKAEGLPPYSAHLPLL--PSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRA-AQAKTLREAW 1045
            LP E ++V+A S+        +  ++  GD +LL++YLNP+L  LA+ A+ P            SEG      E  S + V+++DTVAGR++HR  H HA GPV+M   ENWLVYSYWN + +RTE+ S++ +DG +    +     P + +  SS D   P V LQ++F++P  I +LG T+TA GIT +++LVG E GQ+F L R F+DPR+P  P +  E+AEGL  YS  +P+   P  +LTYN  +            LESTTL+   G LD+F+ R+ P +K FDLLP  FNH ++ ++L ++ + V F  +A AQ K L+ AW
Sbjct:  680 LPRE-QQVIATSHHHGHSVVDSAVTI-TGDDSLLIKYLNPNLFGLATIATEP------------SEGD----SEAASVLRVSLIDTVAGRIIHRARHPHATGPVRMVQSENWLVYSYWNSKEKRTEMVSLSLFDGAVGMHSLNPWKRPSWTSTRSSFDSKAPFV-LQKSFIYPTKITSLGVTVTAHGITPQSVLVGMETGQIFKLARNFIDPRQPEKPLTPEEQAEGLMMYSPLVPVYNRPQAMLTYNRTVENLNSISTAAAELESTTLVFAHG-LDMFYVRMTP-AKSFDLLPSDFNHEML-ILLCLTFLAVTFGTKALAQRKALQSAW 987          
BLAST of NO05G05310 vs. NCBI_GenBank
Match: XP_009033244.1 (hypothetical protein AURANDRAFT_70759 [Aureococcus anophagefferens] >EGB12164.1 hypothetical protein AURANDRAFT_70759 [Aureococcus anophagefferens])

HSP 1 Score: 217.2 bits (552), Expect = 2.400e-52
Identity = 130/333 (39.04%), Postives = 196/333 (58.86%), Query Frame = 0
Query:  723 ERVVALSYPDARETSTTPTSLPLGDGALLLRYLNPHL-LALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTVMDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFYDGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTLTARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKA----------EGLPPYSAHLPLLPSHVLTYNHILXXXXXXXXXXXXLESTTLLLGLGDLDLFFTRLHPSSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRAAQAKTLREAW 1045
            + ++ ++Y DA   S+   +  LGD ALLL+YLNPHL + L+S+    P+PL  + +       +++ +    T+YVT++D V   V HRV+  H   P K  + ENW++YSYWN +A+R E+GS++ ++G I++ G+     PE ++  S+     PPVALQ+TF  P P+ ALG+T T+RGI +K +L+G EPGQ+  LDRR LDPRRP L  +   +A          EGL PY+  +PL P  V+TY+  +            LEST+L+L  G +D+F  R H  S  FDL+ + FN+ L+ ++L+   VG   + +AAQAK L   W
Sbjct: 1200 DAILDVAYGDAGPVSS--KAHVLGDDALLLKYLNPHLAVVLSSSLGGAPAPLLDAKLRVADVAAEDQVEP--PTLYVTLVDVVKASVAHRVAVPHGGAPAKAILNENWVIYSYWNHKAKRAELGSLSLHEGMIERFGLSPFKVPEQESTASAWSLP-PPVALQRTFALPKPVTALGATATSRGIASKHVLLGVEPGQLSALDRRALDPRRPNLDENDKSRAARKRVERELDEGLRPYAPFVPLAPRSVVTYDQQILKLNAIYATDAKLESTSLVLATG-VDVFGCR-HTPSGAFDLIADDFNYALLLLLLLGLSVGALLLRKAAQAKNLAIQW 1525          
The following BLAST results are available for this feature:
BLAST of NO05G05310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27878.11.600e-26650.94protein of unknown function DUF1620 [Nannochlorops... [more]
XP_005855499.11.800e-11645.62hypothetical protein NGA_0248902 [Nannochloropsis ... [more]
CBJ28998.11.800e-6039.30conserved unknown protein [Ectocarpus siliculosus][more]
XP_008901756.14.700e-5340.61hypothetical protein PPTG_08786 [Phytophthora para... [more]
ETK92263.14.700e-5340.61hypothetical protein L915_04340 [Phytophthora para... [more]
ETM51987.14.700e-5340.61hypothetical protein L914_04285 [Phytophthora para... [more]
KUF96050.14.700e-5340.61Superoxide dismutase [Phytophthora nicotianae][more]
KUF98786.14.700e-5340.61ER membrane protein complex subunit 1 [Phytophthor... [more]
XP_002902249.11.800e-5240.61conserved hypothetical protein [Phytophthora infes... [more]
XP_009033244.12.400e-5239.04hypothetical protein AURANDRAFT_70759 [Aureococcus... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR078ncniR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003311NSK003311Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G05310.1NO05G05310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674797gene_10573Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100094g1gene2695Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G05310.1NO05G05310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G05310 ID=NO05G05310|Name=NO05G05310|organism=Nannochloropsis oceanica|type=gene|length=4786bp
CTCCACGACAAATCTTTGCATCCAAAACGTAAAATGTGCCCCGTATTTGT
CGATTTTTAATCGAGAACTGCGATGGCCAACATGCGCCGTTATGACAGGC
TGGCAGGCTGCTCGCTTCTTCTTCCCAGGCCTCTTCGCCGACGAGTAGGA
CTTCCCTTCTCTCACTCAACCCTAAATTACCACCATCAAGGTGGCGCACT
GACAGCCTCACGCCAACCTCATACAGGTACACGGCACAGATTCGCGTAAA
ATAAGAAGAGCGGGGGAATTTAGACGAGTATAAGGGGAACATCAGCAGTG
AGCAGCACCACTTCAAAACACCAAGCTATCGGCAGTCACATCATCATGCG
CTTCTCCTTTTTCCGGCCCTGCTTCCTCCTCCTCTTTTCGACATGCTGCA
TCCTGCTGCTCTGTTCCACCCAAGCCCTCCACGAGGAGGATGCAGGAAAA
TTTGACTGGCACAAGTCTCTTCTGGGACCTGTGACGCAGGCCCGTTTCGA
Ggtatgtaaaggaagtatgaaggtgggggggataggggtgtggtggggca
ggtggacgcgctatgattgatatctcatacagaaaatcggtctttaggcg
cacaacacctgttatcctcacatgagcccctcttaatatcccatccaact
caaagGGAAATTTTCTTCTCCTCGCCTCATCGCTTGGCGCCGTTGCCGTC
GCTCATGCCGGCAACACAGATGGAAGCCTGCTATGGCGGCAAGTCATCCC
ATTGGCAAGTCCTACCCTCCTCCCTCCTGCCGAATTGAGAGGATTAGAAG
GAAAAACAGCAGCTGTGGAGATCTTGGAGGTGGCTTTGCACCCTCAGAAG
CGTTTTGTCCTGGCCTTGTCGCGgtatgtgtaggaggaggggagggaggg
agggagggagagagggagggagggaggggggtgggaggcgaggattcaag
agataattaaaatatacactgttatacttgtcccatacattcttttcaaa
tggaagaaacataaatgcgcatggctttcttcctctctctataccccacg
caactcctcagcccatcctcaaccagcccgcctccctcccttcctccctc
cctccctccctccctccctctttcttccacagCGACCCAAGCACGACTTT
GCTTGATCTCTGGGCCTGGCGTCTATTCGACGGCAACCTGCTCTGGCACG
CCTCCCTCCCCTCCTCCCCCTCCCCCTCCTCGTCCTCCTCCCCCTCGGGC
TACCTGGCCCTCCTCCCTGCCCGCGTGGCCGTGGTGTGCGGGAAGGGCGG
AAGGACGGTGTTTGTCAATGTGGACAACGGCCTCTGTGATGGCGAGGGAC
CGTCCCTCGAGCTAGAGGCAGTAGTTGGCGTGGTCGCGACGGAGGGAGGG
GTGGTGGTGGTAGGCGAGGGGAAGGATAGAAGGGCACAAGCCTTGCTGGT
AAAGATGGGAGAAGGGAAGGCGGAGAAGGTGAAGGCAGTGGCGACCTCGG
ACAGTGGGCTCTTGGCACACGGgtaagtggaggggagcgagagagggagg
gagggaggagggagaggcgggcgggtaggtaggtagcatacatgttgttg
caaacgaggaggttcgactgtttttcaacgtttttcacatcctccactac
agGACGCCCTCCCTTCACGCTTTCGCCCGCCCTGCTCCTGCGCATGGCCT
CTCAGTACTTCTTCGCACCTCGCCCTCCCCTTCCTCCTCTTCCTCCGTTG
CCGACCTCCAGCTCGTCACGCCCACTCTTCACAAAACCACCACCCACGGC
GCTCTCCTCTCTCCCATCCCTTCCTCCCGCCCTCCCTCATCCTCTTGCCT
TGTTCTCTCCGAAGCGGGGGCGGTGGTTGAGCTCTCAGTGGCTGATGGGA
AAATGAAGCAGCGTCTCATCTCCCCTCCTCCCTCCCCCCCTCCCTCCCGC
CCCGTGGTCGCGGCCTCGGCCGGGCCCTACGTCTTCAGGGGAAAGGGAGG
GAAAGAGGGAGGGAAGGAGAGAGGAGTGGAAGTGCTGCGCATTGCAGATG
GACAGGTGGAAGGACGGCTGACACCGCCGGACAAGCGCTCCTTGCGTGCG
ATGTGGGCGACGGTGAAGGGGGAAGGAGGGGGGGAGGGAGAGCTGGAGGG
AGGGGTGCGACTGCTGATGGTGGACGAGGCGGAGACCCTGGCCCTCAAGG
ATGGGAAGGACAAGACAAgtaagtgcgtttggggctcaagggatggacgg
agggagggacggagggaatagcgagcctgtccacacatcccggtctcgtc
gatctcacacccttcttttccatcctcccttcctccctccttcccttcct
ccctcccctccttctagTCTGGCAACGCGAGGAGGCCCTTGCCGACGTCT
CCCAAGTCCTGATCGCGGACTACCTTCCCAAGGAGCAGGGCGGGAGGAAG
GGCGGGAGGGAGGAAGGGGTGGAGGCCGTAGCAGCTGCTGCGTCCTCGAT
GGTGGAGGAGGTGGTGgtgagtgcttctgaagggctctctaatgataacc
ctcccccgccctccctcccttccctcccaaatctcctttctgaacatagt
tgcgccatttaccctcatcattacctccttccccttctccctccctcccc
cccttcctccctgcagGCCTTTCTCCTCCCCCCCTCCCCTTCCTCCCCCT
CCACCCGCGACGCCCACTTCGGGCTCACTAAAGTCCTCCTCCTCCTCTCC
TCCTCCTCCTCCCGCCTCATCGCCCTCCTCTCCTCCGACAGGGGCCAGGT
GCTGTGGACCGCTGACCTGGAAGAAGGCGAGGGAGGGGGGGAGGGAGGGG
GGGAGGGAGGGCAGAGGTGGAGGATGGTATTGCAGGGGGAGGAGGTGCTG
GTGGTTGGGGATGGCGCGAAAGGCAGTGCCGTGTGGTTGGACGTGCTTAC
GGgtaggtggaggagggagtgagggagggaaggaggggagggagggcggg
aatcttcacgtccgtatgcttactcaccgcccgcatccacccttacagGT
GAAGTCACCGCTGCCGTCGCCGACCTCGGCCTGTCCCCTTCCTCCCCCCC
CTCCTCCCTCCTCTTCTTCCCGCTCGACCTCTCCTCGTTCTCCTCCTCCT
CCTCCCTCCCGCCCTCCGCCCGCCTCCTCCTCATCGATGCCTCGGACGCC
GCATCGCACCGCGGTCGTTTCCTAGACAAAGGCTCCTGCTCCTTGAGTGA
GGAAGAGGGCGAGGGCGGGAAGGAGGACGGGCCGGCTAACGTATCCAAGC
CCATCTACTACCACACACTCTCCACGCCCTCCTCCGGCGGCGCTTTCCTC
CAGACCTTCCGCCTCATCATCCCTGCCTCTTCCCCTGCCTCCCCCTCCTG
GCCCTTCGTTTCTTCGCCCATCGGCGCTGCGGCCTTGCCCAGCGAAAGCG
AGCGTGTGGTTGCCCTGTCCTACCCCGACGCACGAGAAACATCCACCACT
CCTACCTCCCTCCCCCTCGGTGACGGAGCCCTCCTCCTCCGCTACCTCAA
CCCCCACCTCCTAGCGCTGGCCAGCACTGCTTCCCTCCCTCCCTCCCCCC
TCACCTTCTCGACTGTCAACAGTACAAGCGAGGGAGGGAAGGAGGAAAGG
AAGGAGAGGGTGTCTACTGTGTATGTGACTGTGATGGACACGGTGGCAGG
GAGAGTGTTGCATCGTGTCTCCCATTTCCACGCCCAGGGCCCAGTGAAGA
TGAGGATGTTTGAGAACTGGCTCGTGTACTCGTACTGGAACTGCAGGgta
ggcaggaggaagggagggagggagggaggatagggctggcgtcacattaa
ctcgccagcttggggtctctcagctgctggctcactttccgttcgccggg
tcctcaatccctccctctccccccccctccctcagGCTCAGCGCACTGAG
GTCGGGTCCATAACTTTTTACGACGGCTTCATCGACAAGAAGGGCATGGG
CATCATGACAACCCCCGAATTCAAGGCCCGgtaagcacgaaggagggagg
gagggagggagggagggagggaggtggagatggacggaaacggatgtcaa
catggaatagaccactggtgccacccacccatcccctccgcctcatccct
ccctccctccctccctccctctctccctccacagCGTCTCTTCCCTCGAC
GGTGACTTGCCCCCCGTGGCCCTGCAACAGACATTCGTCTTCCCCCACCC
CATCCTTGCCCTCGGCAGCACCCTCACCGCTCGAGGGATCACCACGAAGG
CCCTCCTCGTCGGGTATGAACCGGGTCAGGTTTTCCTGCTCGATCGACGT
TTCTTAGACCCTCGTCGCCCCACGCTCCCTCCCTCCAAGGCCGAAAAAGC
CGAAGGCCTCCCCCCTTACTCCGCACACCTCCCCCTCCTTCCCTCTCATG
TCCTGACCTACAACCACATCTTGCATAACTTGCACACGTTGCACACGTCC
CCTTCCTCTCTCGAGTCCACCACCCTCCTCCTGGGCCTCGGTGATCTTGA
CCTCTTCTTCACGCGGCTGCACCCCAGTAGCAAGCCTTTTGATTTGCTGC
CTGAGACATTCAACCACGTTTTGGTGTCAGTTGTGCTGGTGGTGTCCGTT
GTGGGGGTGTGGTTTATGGGGAGGGCCGCGCAGGCGAAGACGTTGAGAGA
GGCCTGGGCCTAGCGTAGAGCAATAAAGAGAGAAATAGAAAGCTGCGAAG
ATGAAAGCAAAGAAAGAACGGTAGACTGAAAAATTG
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protein sequence of NO05G05310.1

>NO05G05310.1-protein ID=NO05G05310.1-protein|Name=NO05G05310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1046bp
MRFSFFRPCFLLLFSTCCILLLCSTQALHEEDAGKFDWHKSLLGPVTQAR
FEGNFLLLASSLGAVAVAHAGNTDGSLLWRQVIPLASPTLLPPAELRGLE
GKTAAVEILEVALHPQKRFVLALSRDPSTTLLDLWAWRLFDGNLLWHASL
PSSPSPSSSSSPSGYLALLPARVAVVCGKGGRTVFVNVDNGLCDGEGPSL
ELEAVVGVVATEGGVVVVGEGKDRRAQALLVKMGEGKAEKVKAVATSDSG
LLAHGTPSLHAFARPAPAHGLSVLLRTSPSPSSSSSVADLQLVTPTLHKT
TTHGALLSPIPSSRPPSSSCLVLSEAGAVVELSVADGKMKQRLISPPPSP
PPSRPVVAASAGPYVFRGKGGKEGGKERGVEVLRIADGQVEGRLTPPDKR
SLRAMWATVKGEGGGEGELEGGVRLLMVDEAETLALKDGKDKTIWQREEA
LADVSQVLIADYLPKEQGGRKGGREEGVEAVAAAASSMVEEVVAFLLPPS
PSSPSTRDAHFGLTKVLLLLSSSSSRLIALLSSDRGQVLWTADLEEGEGG
GEGGGEGGQRWRMVLQGEEVLVVGDGAKGSAVWLDVLTGEVTAAVADLGL
SPSSPPSSLLFFPLDLSSFSSSSSLPPSARLLLIDASDAASHRGRFLDKG
SCSLSEEEGEGGKEDGPANVSKPIYYHTLSTPSSGGAFLQTFRLIIPASS
PASPSWPFVSSPIGAAALPSESERVVALSYPDARETSTTPTSLPLGDGAL
LLRYLNPHLLALASTASLPPSPLTFSTVNSTSEGGKEERKERVSTVYVTV
MDTVAGRVLHRVSHFHAQGPVKMRMFENWLVYSYWNCRAQRTEVGSITFY
DGFIDKKGMGIMTTPEFKARVSSLDGDLPPVALQQTFVFPHPILALGSTL
TARGITTKALLVGYEPGQVFLLDRRFLDPRRPTLPPSKAEKAEGLPPYSA
HLPLLPSHVLTYNHILHNLHTLHTSPSSLESTTLLLGLGDLDLFFTRLHP
SSKPFDLLPETFNHVLVSVVLVVSVVGVWFMGRAAQAKTLREAWA*
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Synonyms
Publications