NO05G04990, NO05G04990 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G04990
Unique Name	NO05G04990
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4615
Alignment location	chr5:1300056..1304670 +

Link to JBrowse

Properties


Property Name	Value
Description	Regulator of nonsense transcripts 2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1300056..1304670 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding
GO:0003723	RNA binding
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR007193	Up-fram_suppressor-2
IPR003890	MIF4G-like_typ-3

Vocabulary: **Biological Process**
Term	Definition
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homology

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BLAST of NO05G04990 vs. NCBI_GenBank
Match: EWM27903.1 (regulator of nonsense transcripts 2 [Nannochloropsis gaditana])

HSP 1 Score: 687.6 bits (1773), Expect = 6.300e-194
Identity = 444/728 (60.99%), Postives = 506/728 (69.51%), Query Frame = 0

Query:  310 KRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAGGRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVP--RPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDVLXXXXXXXXXXXXXXGESVPRYATWEEA----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFAGMVMHSMEERKTSARAGATSLAADNMILPSTLPKVSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFRMLKRGNRGRLEARELMVPDYTSLATTIRTHRDAEKEEHDRLKQRVLQYETMVEEGEGGDEGWMGAESVDLEKVHNRPLTEGEKA 1008
            +RLLA+LF+VPWQ+ +LLPQYSR+VATLSP+LP++GPSLVRELQREFRYF+ KRPN+HLDMK KTVKY+GELVKFK+CPPIVP +    CLEAFSRH+VE+AC LLE+CGRFLFLTPHTH  LK YL  M +LKR K++DP LEVLI+NA LICNPPS +R      VLLPPLHAY+R LLF+RL+ K  DDV+  LRK PWK   G   G  A A G       ELE FFLR+VLQ A+GKFHALH  ADV+AGL KYHE M V +VDE+LEELKRGLETAGGRR+RDTQG LALS LLGE YNY+L+PHAL+FDTLYLFL+YGHEVP    L          YVTHDPR+LTPLDPP DTFR  LVI LLQA G  LA   G  K++  L+ FL YFQRYLFCRGYVPPDTENDVL               + V R+ATWEEA                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    KAFA MVMHS+EERKT+ RAGATS++ DNM+LP+TLPK+S +                                         F MLKRGNRG+LEA+EL+VP YTSLAT IR+H+DA KEE D+LKQRVLQYE+MVE GEGG++GW   E  +LE++ NR LTEGEKA
Sbjct:   17 QRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPS-QRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRG---GAPAEATGL-----SELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGK-GHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTLPKLSHQ---------------------------EQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKA 707

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BLAST of NO05G04990 vs. NCBI_GenBank
Match: EWM27904.1 (regulator of nonsense transcripts 2 [Nannochloropsis gaditana])

HSP 1 Score: 476.1 bits (1224), Expect = 2.900e-130
Identity = 346/599 (57.76%), Postives = 391/599 (65.28%), Query Frame = 0

Query:  439 MMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAGGRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVP--RPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDVLXXXXXXXXXXXXXXGESVPRYATWEEA----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFAGMVMHSMEERKTSARAGATSLAADNMILPSTLPKVSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFRMLKRGNRGRLEARELMVPDYTSLATTIRTHRDAEKEEHDRLKQRVLQYETMVEEGEGGDEGWMGAESVDLEKVHNRPLTEGEKA 1008
            M +LKR K++DP LEVLI+NA LICNPPS +R      VLLPPLHAY+R LLF+RL+ K  DDV+  LRK PWK   G   G  A A G       ELE FFLR+VLQ A+GKFHALH  ADV+AGL KYHE M V +VDE+LEELKRGLETAGGRR+RDTQG LALS LLGE YNY+L+PHAL+FDTLYLFL+YGHEVP    L          YVTHDPR+LTPLDPP DTFR  LVI LLQA G  LA   G  K++  L+ FL YFQRYLFCRGYVPPDTENDVL               + V R+ATWEEA                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    KAFA MVMHS+EERKT+ RAGATS++ DNM+LP+TLPK+S +                                         F MLKRGNRG+LEA+EL+VP YTSLAT IR+H+DA KEE D+LKQRVLQYE+MVE GEGG++GW   E  +LE++ NR LTEGEKA
Sbjct:    1 MERLKRVKSLDPTLEVLIDNACLICNPPS-QRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRG---GAPAEATGL-----SELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGK-GHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTLPKLSHQ---------------------------EQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKA 562

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BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_005854729.1 (regulator of nonsense transcripts 2, partial [Nannochloropsis gaditana CCMP526] >EKU21632.1 regulator of nonsense transcripts 2, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 469.5 bits (1207), Expect = 2.700e-128
Identity = 265/500 (53.00%), Postives = 305/500 (61.00%), Query Frame = 0

Query:  219 MDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAGGRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVP--RPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYV 717
            MDVIVEEGG EG                                    G T AH+++NHLLH++LPLCY +E++D F  Q APF++ K + KR                                                             KTVKY+GELVKFK+CPPIVP +    CLEAFSRH+VE+AC LLESCGRFLFLTPHTH  LK YL  M +LKR K++DP LEVLI+NA LICNPPS +R      VLLPPL+AY+R LLF+RL+ K  DDV+  LRK PWK   G   G  A A G       ELE FFLR+VLQ A+GKFHALH  ADV+AGL KYHE M V +VDE+LEELKRGLETAGGRR+RDTQG LALS LLGE YNY+L+PHAL+FDTLYLFL+YGHEVP    L          YVTHDPR+LTPLDPP DTFR  LVI LLQA G  LA   G  K++  L+ FL YFQRYLFCRGYV
Sbjct:    1 MDVIVEEGGEEG----------GEDDEGLTDEYRSGLKEEDGKEGVEEGATPAHYQVNHLLHDILPLCYEKEKTDAFILQIAPFVKRKGVAKR-------------------------------------------------------------KTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLESCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPS-QRTTTRQTVLLPPLYAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRG---GAPAEATGL-----SELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGK-GHEKVRGKLSLFLTYFQRYLFCRGYV 419

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BLAST of NO05G04990 vs. NCBI_GenBank
Match: CBN74240.1 (putative hUPF2 [Ectocarpus siliculosus])

HSP 1 Score: 336.3 bits (861), Expect = 3.500e-88
Identity = 280/712 (39.33%), Postives = 398/712 (55.90%), Query Frame = 0

Query:   28 LLPSQMQEELRSLALKAFESLSTQLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRL--TAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAGGRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEV------PRP------LXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDVL 726
            ++ + ++  LRSL    F++L + L   H+    LE++ EKD L  G L+E+KE  LEE+RKG E+ + N+ +L+  L+  +P L E E E EG+  GG+SLW+G +G    G                          G  EE  XXXXXXXXXXXXXXXXXXXXXXX              +  R    ++V+ E            XXXXXXXX XXXXXXXXXXXXXXXXXXXXX   S + ++  +L + LP C++QER D+FA +F  ++  K  +K+L+A LF+VP Q  DLLP Y+R+VA L   +  + P L+ EL+  FRYF+ K+    +D ++K  ++IGELVKF+V PP+V   C + CL+ FS   V+    LLE+CGRFLF    TH   + +L VMMK+K AKN+D  LE +++NA+  C PP  ++R      +  PL  Y+R L+  +L      V++VI+ LRKLPW+                      ++E+  LRA L+  + ++  +HL ADVL+GL+++ + + V+ VD +LE + R +E  GG    ++Q  +  + LLGELYNY++V    IF+TL+L ++ GHEV      PRP                 +   DPRV +P DPPGD  R +LV+ +L+  G +     G  K+ K    FL  FQRYLFC+   P  TE  VL
Sbjct:  665 VVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGS--GGISLWEGGVGGDGTG------------------------YTGPFEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEMKR----LEVVAE------------XXXXXXXXTXXXXXXXXXXXXXXXXXXXXXXXMSRNSRLMLMLEDELPNCHNQERVDEFAKKFC-YVNSKSARKKLVAALFNVPRQARDLLPMYARLVAILDQAMKTIAPLLIEELRSHFRYFLRKKAPGQIDHRIKNARFIGELVKFRVAPPVVAFQCLRSCLDDFSSLAVQTMAALLETCGRFLFRQKLTHQRTRSFLTVMMKVKSAKNLDKRLEAVVDNAFYTCCPPERQQRTAK---VRTPLQLYVRHLMMDKLRDDPDVVEEVIKQLRKLPWQ------------------DPEADVESEVLRASLRLCRSRYPCIHLAADVLSGLARHQDRVAVKAVDAVLEAMHRAIELPGG-GGGESQRLVGYARLLGELYNYAVVGSPTIFETLHLLVDSGHEVPPEMKQPRPDPRNPTRGAMIPPAAAPWARFDPRVRSPTDPPGDCLRIRLVVAVLEGCGSYFVRGAGLDKLSK----FLGVFQRYLFCKEGFPAGTEFAVL 1307

[Close]

BLAST of NO05G04990 vs. NCBI_GenBank
Match: OIT28399.1 (regulator of nonsense transcripts upf2 [Nicotiana attenuata])

HSP 1 Score: 336.3 bits (861), Expect = 3.500e-88
Identity = 258/675 (38.22%), Postives = 371/675 (54.96%), Query Frame = 0

Query:   52 LVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKAL-GPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            L + H    ++E  + K     G L+E+   A E+ RK  +   + +  L+E LD+  P + ED        G   S       +  L   +DDED+R FYE LPDL A +PA +LG  E ++                       + V     AEG +     + D+ D          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+  A+  ++ LL   LP C  ++  D    +F  +L  K  +K+L+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KF++ PP +  SC K CL+ FS H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E EA+ L+  ++  +GK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY LV  ++IFDTLYL L +GHE                 T +  V   LDPP D FR ++V+ LL+  GH+      R   K+ L+ FLI+FQRY+  +G +P D E D+
Sbjct:  263 LQSEHASLRQMEHENAKTLSAKGELNEENASAYEKQRKAYDQLYRGISGLAEALDMQPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKSSEQPLKAQEHSIDSASEADEAQTAAV---ETAEGAVDAGAVQEDRNDK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGAN--LDGLLQR-LPSCVSRDLIDQLTVEFC-YLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFSFLINKKDQMNIETKIRNIRFIGELCKFRMAPPGLVFSCLKACLDEFSHHNIDVACNLLETCGRFLYRSPETAIRMANMLEILMRLKNVKNLDPRHITLVENAYYLCKPPERSARVSK---VRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW----------------------SECEAYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRVGLELNDFGMQQR----RIAHMRFLGELYNYELVDSSVIFDTLYLILVFGHE-----------------TSEQDV---LDPPEDCFRIRMVVTLLETCGHYF----DRGSSKRKLDRFLIHFQRYILNKGVLPLDIEFDL 876

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BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_019231908.1 (PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana attenuata] >XP_019231910.1 PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana attenuata])

HSP 1 Score: 336.3 bits (861), Expect = 3.500e-88
Identity = 258/675 (38.22%), Postives = 371/675 (54.96%), Query Frame = 0

Query:   52 LVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKAL-GPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            L + H    ++E  + K     G L+E+   A E+ RK  +   + +  L+E LD+  P + ED        G   S       +  L   +DDED+R FYE LPDL A +PA +LG  E ++                       + V     AEG +     + D+ D          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+  A+  ++ LL   LP C  ++  D    +F  +L  K  +K+L+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KF++ PP +  SC K CL+ FS H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E EA+ L+  ++  +GK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY LV  ++IFDTLYL L +GHE                 T +  V   LDPP D FR ++V+ LL+  GH+      R   K+ L+ FLI+FQRY+  +G +P D E D+
Sbjct:  263 LQSEHASLRQMEHENAKTLSAKGELNEENASAYEKQRKAYDQLYRGISGLAEALDMQPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKSSEQPLKAQEHSIDSASEADEAQTAAV---ETAEGAVDAGAVQEDRNDK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGAN--LDGLLQR-LPSCVSRDLIDQLTVEFC-YLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFSFLINKKDQMNIETKIRNIRFIGELCKFRMAPPGLVFSCLKACLDEFSHHNIDVACNLLETCGRFLYRSPETAIRMANMLEILMRLKNVKNLDPRHITLVENAYYLCKPPERSARVSK---VRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW----------------------SECEAYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRVGLELNDFGMQQR----RIAHMRFLGELYNYELVDSSVIFDTLYLILVFGHE-----------------TSEQDV---LDPPEDCFRIRMVVTLLETCGHYF----DRGSSKRKLDRFLIHFQRYILNKGVLPLDIEFDL 876

[Close]

BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_022765309.1 (regulator of nonsense transcripts UPF2-like isoform X6 [Durio zibethinus] >XP_022765310.1 regulator of nonsense transcripts UPF2-like isoform X6 [Durio zibethinus])

HSP 1 Score: 335.9 bits (860), Expect = 4.600e-88
Identity = 252/691 (36.47%), Postives = 372/691 (53.84%), Query Frame = 0

Query:   45 FESLSTQLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEME-GAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQ--------MDVIVEEGGV-EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            +E+++  L + H    ++E  + K     G LSE+   + E+ RK  +   +N+ +L+E LD+  P + ED        G   LSL  G   +     +DDED+R FYE LPDL A +PA +LG  + +                          + + + A+  L + +   DQ        ++  V+ G + EG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            L + LP C  ++  D    +F  +L  K  +KRL+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KFK+ P  +  SC K CL+ F+ H+++V+C LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     +  PLH YIR LLF  L   +++ V+R LRKLPW                       E E++ L+  ++  KGK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY  V  ++IF+TLYL L +GH+    L               P     LDPP D FR ++VI LLQ  GH+      R   K+ L+ FLI+FQRY+  +G +P D E D+
Sbjct:  143 YEAVTELLQSEHASLRQMEHENAKILNAKGELSEENASSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVTTGEDALSLATGKESSNLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEADPKV-------------------------IEQTSKAQEQLTESSTEADQSKSVAQDAVEPSVDSGNLQEGESIEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLDALLQRLPGCVSRDLIDQLTVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVPSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKTCLDDFTHHNIDVSCNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSK---VRSPLHQYIRKLLFTDLDKSSLEHVLRQLRKLPW----------------------SECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRLGLELNDYGMQQR----RIAHMRFLGELYNYEHVDSSVIFETLYLILVFGHDTAEVLSY-------------PIYCYALDPPEDCFRIRMVITLLQTCGHYF----DRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDL 761

[Close]

BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_022765311.1 (regulator of nonsense transcripts UPF2-like isoform X7 [Durio zibethinus])

HSP 1 Score: 335.9 bits (860), Expect = 4.600e-88
Identity = 252/691 (36.47%), Postives = 372/691 (53.84%), Query Frame = 0

Query:   45 FESLSTQLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEME-GAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQ--------MDVIVEEGGV-EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            +E+++  L + H    ++E  + K     G LSE+   + E+ RK  +   +N+ +L+E LD+  P + ED        G   LSL  G   +     +DDED+R FYE LPDL A +PA +LG  + +                          + + + A+  L + +   DQ        ++  V+ G + EG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            L + LP C  ++  D    +F  +L  K  +KRL+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KFK+ P  +  SC K CL+ F+ H+++V+C LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     +  PLH YIR LLF  L   +++ V+R LRKLPW                       E E++ L+  ++  KGK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY  V  ++IF+TLYL L +GH+    L               P     LDPP D FR ++VI LLQ  GH+      R   K+ L+ FLI+FQRY+  +G +P D E D+
Sbjct:   97 YEAVTELLQSEHASLRQMEHENAKILNAKGELSEENASSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVTTGEDALSLATGKESSNLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEADPKV-------------------------IEQTSKAQEQLTESSTEADQSKSVAQDAVEPSVDSGNLQEGESIEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLDALLQRLPGCVSRDLIDQLTVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVPSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKTCLDDFTHHNIDVSCNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSK---VRSPLHQYIRKLLFTDLDKSSLEHVLRQLRKLPW----------------------SECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRLGLELNDYGMQQR----RIAHMRFLGELYNYEHVDSSVIFETLYLILVFGHDTAEVLSY-------------PIYCYALDPPEDCFRIRMVITLLQTCGHYF----DRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDL 715

[Close]

BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_022765301.1 (regulator of nonsense transcripts UPF2-like isoform X1 [Durio zibethinus] >XP_022765302.1 regulator of nonsense transcripts UPF2-like isoform X1 [Durio zibethinus] >XP_022765304.1 regulator of nonsense transcripts UPF2-like isoform X1 [Durio zibethinus])

HSP 1 Score: 335.9 bits (860), Expect = 4.600e-88
Identity = 252/691 (36.47%), Postives = 372/691 (53.84%), Query Frame = 0

Query:   45 FESLSTQLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEME-GAGGGGLSLWDGDMGAKALGPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQ--------MDVIVEEGGV-EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            +E+++  L + H    ++E  + K     G LSE+   + E+ RK  +   +N+ +L+E LD+  P + ED        G   LSL  G   +     +DDED+R FYE LPDL A +PA +LG  + +                          + + + A+  L + +   DQ        ++  V+ G + EG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            L + LP C  ++  D    +F  +L  K  +KRL+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KFK+ P  +  SC K CL+ F+ H+++V+C LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     +  PLH YIR LLF  L   +++ V+R LRKLPW                       E E++ L+  ++  KGK+  +HL A + AGLS+YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY  V  ++IF+TLYL L +GH+    L               P     LDPP D FR ++VI LLQ  GH+      R   K+ L+ FLI+FQRY+  +G +P D E D+
Sbjct:  259 YEAVTELLQSEHASLRQMEHENAKILNAKGELSEENASSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDSHTTRVTTGEDALSLATGKESSNLEAIWDDEDTRAFYECLPDLRAFVPAVLLGEADPKV-------------------------IEQTSKAQEQLTESSTEADQSKSVAQDAVEPSVDSGNLQEGESIEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLDALLQRLPGCVSRDLIDQLTVEFC-YLNSKSNRKRLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVPSMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKTCLDDFTHHNIDVSCNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVSK---VRSPLHQYIRKLLFTDLDKSSLEHVLRQLRKLPW----------------------SECESYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRLGLELNDYGMQQR----RIAHMRFLGELYNYEHVDSSVIFETLYLILVFGHDTAEVLSY-------------PIYCYALDPPEDCFRIRMVITLLQTCGHYF----DRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDL 877

[Close]

BLAST of NO05G04990 vs. NCBI_GenBank
Match: XP_009601343.1 (PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana tomentosiformis] >XP_009601344.1 PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana tomentosiformis])

HSP 1 Score: 335.5 bits (859), Expect = 6.100e-88
Identity = 263/694 (37.90%), Postives = 379/694 (54.61%), Query Frame = 0

Query:   34 QEELRSLALKAFESLSTQLV-AVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQALSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKAL-GPYDDEDSRLFYEDLPDLLATLPAAMLGLTEEEAXXXXXXXXXXXXXXXXXXXXXXXSGVVELAVAEGGLGKPNRRVDQMDVIVEEGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFAPFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVRELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCLEAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDPNLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVDDVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKGKFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAG-GRRERDTQGHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLXXXXXXXXXXYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLNTFLIYFQRYLFCRGYVPPDTENDV 725
            Q+ L   A + +   + +L+ + H    ++E  + K     G L+E+   A E+ RK  +   + +  L+E LD+  P + ED        G   S       +  L   +DDED+R FYE LPDL A +PA +LG  E ++                       S V     AEG +     + D+ D          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+  A+  ++ LL   LP C  ++  D    +F  +L  K  +K+L+  LF+VP  +L+LLP YSR+VATLS  + D+   L++ L+ EF + + K+   +++ K++ +++IGEL KF++ PP +  SC K CL+ FS H+++VAC LLE+CGRFL+ +P T   + + L+++M+LK  KN+DP    L+ NAY +C PP    R+     + PPLH YIR LLF  L   +++ V+R LRKLPW                       E EA+ L+  ++  +GK+  +HL A + AGLS YH+   V +VDE+LEE++ GLE    G ++R     +A    LGELYNY LV  ++IFDTLYL L +GHE                 T +  V   LDPP D FR ++VI LL+  GH+      R   K+ L+ FLI+FQRY+  +G +P D E D+
Sbjct:  244 QKRLFRKAFQTYYDAAIELLQSEHASLRQMEHENAKTLSAKGELNEENASAYEKQRKAYDQLYRGISGLAEALDMQPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLLGEAEPKSSEQPLKAQEHSIDSASEADEAQTSAV---ETAEGAVDAGAVQEDRNDK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGAN--LDGLLQR-LPSCVSRDLIDQLTVEFC-YLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSMLLQLLEEEFSFLINKKDQMNIETKIRNIRFIGELCKFRMAPPGLVFSCLKACLDEFSHHNIDVACNLLETCGRFLYRSPETAIRMANMLEILMRLKNVKNLDPRHITLVENAYYLCKPPERSARVSK---VRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW----------------------SECEAYLLKCFMKVHRGKYGQIHLIASLTAGLSCYHDDFAVAVVDEVLEEIRVGLELNDFGMQQR----RIAHMRFLGELYNYKLVDSSVIFDTLYLILVFGHE-----------------TSEQDV---LDPPEDCFRIRMVITLLETCGHYF----DRGSSKRKLDRFLIHFQRYILNKGVLPLDIEFDL 876

The following BLAST results are available for this feature:

BLAST of NO05G04990 vs. NCBI_GenBank

BLAST of NO05G04990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM27903.1	6.300e-194	60.99	regulator of nonsense transcripts 2 [Nannochlorops...	[more]
EWM27904.1	2.900e-130	57.76	regulator of nonsense transcripts 2 [Nannochlorops...	[more]
XP_005854729.1	2.700e-128	53.00	regulator of nonsense transcripts 2, partial [Nann...	[more]
CBN74240.1	3.500e-88	39.33	putative hUPF2 [Ectocarpus siliculosus]	[more]
OIT28399.1	3.500e-88	38.22	regulator of nonsense transcripts upf2 [Nicotiana ...	[more]
XP_019231908.1	3.500e-88	38.22	PREDICTED: regulator of nonsense transcripts UPF2 ...	[more]
XP_022765309.1	4.600e-88	36.47	regulator of nonsense transcripts UPF2-like isofor...	[more]
XP_022765311.1	4.600e-88	36.47	regulator of nonsense transcripts UPF2-like isofor...	[more]
XP_022765301.1	4.600e-88	36.47	regulator of nonsense transcripts UPF2-like isofor...	[more]
XP_009601343.1	6.100e-88	37.90	PREDICTED: regulator of nonsense transcripts UPF2 ...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL085	nonsL085	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR117	ngnoR117	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G04990.1	NO05G04990.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G04990.1	NO05G04990.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G04990 ID=NO05G04990|Name=NO05G04990|organism=Nannochloropsis oceanica|type=gene|length=4615bp
ATGGTGCCACGCAAGACTAAGgtaaaggagggagggagggagggagggag
ggagggagggagagagggagcgaagagaggatttgagcaggctgtgagtt
ttactacatcactcaccctccctccctccctccctccctccctcccgccc
tccttctgtcagGCCCTCCACCTCACGGCCAAGTCAGCCACGGCCCCGAT
ACCCTCCCCCTTCCTCGCCGACCTCCTCCCTTCCCAGATGCAGGAAGAAC
TACGCTCCTTGGCATTAAAGGCGTTTGAGTCCCTCAGCACACAGCTCGTC
GCTGTGCATAAGgtagggatggatggagggatggagggtgggggggaggg
agcgagggaaggaagacccagtcgcgatggtattttactttgacgtttcc
ctaacctcccctccctccctccctccctccctcccgtagCACAAGACGGA
GCTCGAGCGGCGGTCGGAGAAGGACACCCTGCTGTATGGTGCACTGAGTG
AGGATAAGGAGCTGGCCCTGGAGGAGGCGCGAAAAGGATGCGAGTCCTTC
GTGAAAAACATGCAGgtacggaagagaggcaggacgggagaaggggaggg
agggaggaaaattggaaatggtgcgtggttactgatgaaaaacgccccct
cgatgcacacagGCGCTGTCAGAGGGGTTGGACTTACCCCTTCCACACCT
GCAGGAGGATGAAGGCGAGATGGAGGGCGCTGGTGGCGGCGgtacgtgcc
tttaccttccctccctcgctttgtttcctcccttccctcacccaacccca
ccctccctccctccctcccgtccatccccacagGCCTCTCTCTCTGGGAT
GGCGACATGGGCGCCAAGGCGCTCGGCCCATACGACGACGAAGACAGCAG
GCTCTTCTACGAGGACCTGCCCGATCTTCTCGCCACCCTACCTGCGgtgc
gtcccgccctccttccatcctccctccctccctccctccctcctcccttt
atcctcaccatttcctctcaccttctttgccccctcagGCGATGCTGGGG
CTGACGGAGGAAGAGGCTGCAAAACTCCGACAAGACAAGGAGGCCAAAGT
CCAGCAGCAACAGCAGCAGgcaagccctcctcccctccctccctccctcc
ctccctccctccctcctccttttcctcttttttttttttctgacccactc
acgaacacctttcactattcttctttgatttccctccctcccgccctccc
tccctccctccctctgacgcatcctcagGAGGAGGAGGCCGCTCTATCGG
GCGTGGTGGAGCTGGCCGTGGCGGAGGGTGGGCTTGGAAAACCCAACCGC
CGCGTGGATCAGATGGACGTTATTGTCGAAGAGGGTGGAGTGGAGGGAGA
GGGGGAGGAAGAGGAAGAGGAAGAGGAGGAGGGGGACGATAATGACGAGG
ACCGGCCTCGGTTGAAAGAGGAGGGGGAGGGAGGGGAGGAGGAAGGGGAG
GAGGAGGGGTTGACGTCGGCACACCATAAAATCAACCACTTATTGCACGA
GGTGCTGCCGTTATGTTATCATCAAGAGAGGAGCGATGACTTTGCGTGGC
AATTCGCGCCATTTTTGAGGCACAAGCGGATCCAGAAGgtgagggaggga
gggaggaagtcgcggtaggaggcaaactggaaccactttcccctccctcc
ctccctccctccctccctccttgccatggcacctcttgacacccctccct
cttctccgttgccagccgcatcgtctcaccccttcccttcctcccccctc
gctcccccagCGCCTCCTCGCCATCCTCTTTTCCGTGCCGTGGCAAAACC
TAGACCTTCTCCCTCAGTACAGCCGGATCGTCGCCACCCTCTCGCCCGTC
CTTCCTGACCTGGGCCCCTCCCTCGTCAGGGAGCTACAGAGGGAATTTCG
TTATTTTATGACGAAACGCCCGAACACCCACCTGGACATGAAGgtgagga
caaggagggagggagggagggagggagggagagcgtgaaggaaggggagg
gtgctgctatctccgagccttttcaccgtccacaatcatattcccaccct
tcctgcctccttccctccctccctctctccctcagCTCAAAACCGTGAAG
TATATCGGGGAGCTCGTGAAGTTTAAGGTCTGTCCGCCTATTGTGCCTTT
GAGCTGCACTAAAGTGTGTTTGGAGGCCTTCTCGCGACATCACGTCGAGg
tgagtcgcatgcgttccctccctccctccctccctcccatcctccctccc
tcccgccctttcatccagccttctcttctcggtcctcgtcacgcatccat
ccctcttccccccccccaccctccccccctccctcctccttctcaccctc
agGTCGCATGCGGGCTGCTGGAGAGCTGTGGCCGGTTCCTTTTCCTCACC
CCTCACACCCACCCCCACCTCAAGCACTACCTGGATGTGATGATGAAGCT
GAAGCGCGCAAAGAATGTGGACCCAAACCTCGAGgtaagagtccccctcc
ctccccctctccctatccgcttccttttccttggtgacacccacttctct
tcctctctcccccccttcctccctccctccctccctccctccctccctcc
ctccctccatcagGTTCTTATCAACAACGCCTACCTCATCTGCAACCCTC
CCTCGGACCGTCGGCGCCTCCACAATGACCTCGTCCTCCTTCCCCCCCTC
CATGCCTACATCCGCTCGCTCCTCTTCCAGCGACTGACGGCCAAGACCGT
CGATGACGTTATTCGCCTCCTTCGGAAACTGCCCTGGAAAGCCAAGGGCG
GGACGGAGGAAGGGATTGCTGCGGCTGCGGGTGGCGAGGGAGGGAAGGAG
GGGGGGGAGCTGGAGGCTTTTTTCCTGCGTGCGGTTTTGCAGGGTGCAAA
GGGGAAGTTCCACGCACTGCACCTCTTCGCGGATGTGCTGGCAGGATTAA
GTAAATACCACGAAGCCATGTGCGTGCGCCTGGTCGACGAGTTGCTGGAG
GAGTTAAAGAGGGGCTTGGAGACAGCGGGGGGGAGGAGGGAGAGGGATAC
GCAGGGCCACCTCGCCCTCAGTGGGCTTCTCGGTGAGCTGTACAATTACA
GCTTAGTGCCGCATGCCTTGATCTTCGACACCCTCTACCTCTTCCTCAAC
TACGGCCACGAGGTGCCCCGCCCCCTCCCTTCCTCCCTCCCTCCCTCCTT
CCCCCCCTACGTCACGCATGATCCCCGGGTGCTAACCCCTCTCGACCCTC
CTGGCGACACTTTCCGCACTCAACTCGTGATCGTTCTCCTGCAGGCCACA
GGACACTTCTTGGCCTCCTCCACGGGAAGGATAAAGATGAAGAAAAGCTT
GAATACGTTTCTGATCTATTTCCAACGCTACCTTTTTTGTCGTGGGTACG
TTCCTCCTGACACGGAGAATGACGTGCTGGATTTACTGGATCTTTTGGAG
GGGCTAGGGGGGGAGGGAGGGGGGGAGAGCGTGCCACGGTATGCGACATG
GGAAGAGGCGCAGGCGGAGgtggataggatggagagggaggagtgggaga
ggaaggggggggaagggagggagagggggggaaggaggggaggaaggtgg
ggggggatgttgcgcagggaggacagAAGGAGGGAGAGGATGACGAGAGC
ATAAGTAGCGATGGGAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAG
CAGTGGGAGTGACAGTGACAGTGATGAGGAGGGGCAGGAGACAGAACCTC
CTGAGGATGAAGAGGACGAGGAGGAGGACGAGGAGGAGGACGAGGAGGAG
GAAGAGGCCGTGGCGGTTCATCGGCGGATGCCTCAGAAGACTGAAGAAGA
CATGGAGATGGAGGCAGAATTTGAAAAAGCGTTTGCAGGTATGGTGATGC
ACAGCATGGAGGAACGGAAAACAAGCGCTCGGGCAGGGGCCACGAGCCTG
GCAGCTGACAATATGATTCTACCGTCAACCCTCCCGAAGGTATCGAGGCG
AGGAGGAAGGGGAGGAGAAGGGGAGGAAGAGGAAGAAGAGGGGACGGAGA
GAGGTGGGGGATGGGGCGCTAAGTCGGGAGCAGGAGGGGGTGAAGGGGGG
GGAGGAGGGGGAGGAGGGGTGACGTTTCGAATGTTGAAGAGGGGAAACCG
AGGCCGTTTAGAAGCGAGGGAGTTAATGGTCCCTGACTACACTTCCTTGG
CTACCACCATCCGGACACATCGGGATGCCGAGAAGGAAGAGCATGACAGG
CTGAAGCAGCGCGTGCTGCAGTATGAGACGATGGTGGAGGAGGGGGAGGG
AGGGGACGAGGGGTGGATGGGTGCAGAAAGCGTGGATCTTGAGAAAGTTC
ATAACAGGCCGTTAACGGAAGGGGAAAAGGCGAGGCTCACAGCACTGGCA
GCTCGACGCCGGGAGCAGCGGTCGAGACGAGGAAGGGGGGGAGGAGTAGG
ATCAGGGGCAGGGGGTGGAGGGAGTACCGGCGGAGGAGCCGGGGGAGGAC
GAGGCAGTGCACAACCGCCCTTGCAGTTTTATGAACGAGGGTTTTTTAAC
CGAAGCTCTTCATAA

protein sequence of NO05G04990.1

>NO05G04990.1-protein ID=NO05G04990.1-protein|Name=NO05G04990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1068bp
MVPRKTKALHLTAKSATAPIPSPFLADLLPSQMQEELRSLALKAFESLST
QLVAVHKHKTELERRSEKDTLLYGALSEDKELALEEARKGCESFVKNMQA
LSEGLDLPLPHLQEDEGEMEGAGGGGLSLWDGDMGAKALGPYDDEDSRLF
YEDLPDLLATLPAAMLGLTEEEAAKLRQDKEAKVQQQQQQEEEAALSGVV
ELAVAEGGLGKPNRRVDQMDVIVEEGGVEGEGEEEEEEEEEGDDNDEDRP
RLKEEGEGGEEEGEEEGLTSAHHKINHLLHEVLPLCYHQERSDDFAWQFA
PFLRHKRIQKRLLAILFSVPWQNLDLLPQYSRIVATLSPVLPDLGPSLVR
ELQREFRYFMTKRPNTHLDMKLKTVKYIGELVKFKVCPPIVPLSCTKVCL
EAFSRHHVEVACGLLESCGRFLFLTPHTHPHLKHYLDVMMKLKRAKNVDP
NLEVLINNAYLICNPPSDRRRLHNDLVLLPPLHAYIRSLLFQRLTAKTVD
DVIRLLRKLPWKAKGGTEEGIAAAAGGEGGKEGGELEAFFLRAVLQGAKG
KFHALHLFADVLAGLSKYHEAMCVRLVDELLEELKRGLETAGGRRERDTQ
GHLALSGLLGELYNYSLVPHALIFDTLYLFLNYGHEVPRPLPSSLPPSFP
PYVTHDPRVLTPLDPPGDTFRTQLVIVLLQATGHFLASSTGRIKMKKSLN
TFLIYFQRYLFCRGYVPPDTENDVLDLLDLLEGLGGEGGGESVPRYATWE
EAQAEKEGEDDESISSDGSSSSSSSSSSSSSGSDSDSDEEGQETEPPEDE
EDEEEDEEEDEEEEEAVAVHRRMPQKTEEDMEMEAEFEKAFAGMVMHSME
ERKTSARAGATSLAADNMILPSTLPKVSRRGGRGGEGEEEEEEGTERGGG
WGAKSGAGGGEGGGGGGGGVTFRMLKRGNRGRLEARELMVPDYTSLATTI
RTHRDAEKEEHDRLKQRVLQYETMVEEGEGGDEGWMGAESVDLEKVHNRP
LTEGEKARLTALAARRREQRSRRGRGGGVGSGAGGGGSTGGGAGGGRGSA
QPPLQFYERGFFNRSSS*

Synonyms

Publications