NO05G04960, NO05G04960 (gene) Nannochloropsis oceanica

Overview
NameNO05G04960
Unique NameNO05G04960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5480
Alignment locationchr5:1285950..1291429 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1285950..1291429 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G04960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04960.1NO05G04960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04960.1NO05G04960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04960 ID=NO05G04960|Name=NO05G04960|organism=Nannochloropsis oceanica|type=gene|length=5480bp
ATGAGAAAGAGGCGTGGTGGTGGTGGCGGTGGAGTGGGTGGGGGGAGAGA
AGGGATGGGATGGGATGAAGAGGAGGGGATGAACGAAGAGGAGGATGAGG
AAGAGTATGAAGAGGAGGAGATTGAAGGCGTGGAAAGGGCAGAAATGCGG
GCTGTGGCTGCTGAGGCGGATAGAATGGCCCAATCACTTTGCCTCCCGGC
GCGTGAAGCGATGGAAGAGGTGGGACAAATCTCGATCCTGTGGAAGAGAG
GAAGGGAGGGAGGGCGGGGGAGGACAGCTGGGACGATTCGGTTTGTGTGC
GATCCGTTGGCTGATGACGTTACTCCCGGGGGATCATCCTATGCGCTTCG
ATTGTTTGTAGAAGCGCATGCACGGGAAGCGGTGGCCTTGTGTTTTGAGG
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACGGACG
CCCTTTCTTCCTCTGGTGACAGATCGATCTTGTCACCTTTCGACACCCGA
GTATCCGAGTCGGACCTTGTCTAGTGATGCGTTTGGGTCTCATTTCGTTG
ACCATTCCTCCCTCTCTTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCC
TTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTC
CCTCCCTCTACAGACCGATCTGGAGCAGAAGAGGGAAGGTGAGGGGCAGA
AGGAAAAAGGGAGGGAAGACACAGGACAAATGGCAATGTTGGATGAGCTT
TTGGCACCGGCCAAAGCCGAAGTCGCGGCGAAAGGGTATGGTGGAGGAGG
TGAGGGAGGAAGGGATGATGGAGCGAGGGGTGATGCGCATGCTGCCTGGG
TACTTCGGCGGGGGCCTCAGCCTTTGGAGAGGATTGAGGTCGGGGAAGAG
GGGAAGGGGGAGGAGAAAGTAATGGGAGAGGCGATGGAAATGTCAGAAGA
GAAGGCTGGAGAGGAGAATAAGAGGACTCGCGACCAGCAGCAGCAATGGC
GTCTGACCAGTATGGTGGCTGAGGTGCTCGTGGCTTGCCTTGAAGGAGGA
AGAGAAGGAGGAGGAGGAGAAGGAGGAGGGATGATTATACTGTCACCTCC
ACCTTTATTGATTGCCGAGCGTGGGTTGGCCTTATGGCGAGGCGAGGGAG
AAAAGAAGGACAGGGATCCCTCGTCCTCTCCCTCCTCCTCCTCCTCTTCT
TCTTCTCCATCTTCCAACTTTTTCCCTTCTTCCTTCCCCCTCAGCACCTT
CTCTTACCTTGCGCCTTGCTTCGCGCCAAATACCAAGGAGGAGGATGAGG
AGAAGGAGGGGAACAAGGAGGGGAGGGAGGAAGGGAGGGAGGAAGACCTG
GAAAGTCTGCTCCAGATCATGGCTCCTTCTGCTGACGAGGACGATCTCTT
CCTCCCCCCTCCCCCCAACTACCCTCGCCTGCCCGAGGAAGAGGGAGGAG
AAGAAGAAGAAGAAGAGGAAGAAGAAGGAGAAGACAACAAAGCAGCAGCG
ACAGCAGCAACAGCAGTGACAGCATCATCATCAGCAGCAGCAGCAACAGC
TGTCAAAGACGACGACAATGCCATGGTCgtgtgccctccctcctcctctc
attcctcttccttctcctcttcctcctcctccggaaaccttgcttccctc
cccttccgtatgattcttaacgccgccaaggccatctacaccctccagcc
ccttccctcccttcttccccctctcttttcctcctcccacctcttcccct
ccttccccccctccctccctcccttcctccctccacccttacctacatca
cctgccgctccctagctcatcctccttctcccccttccctcctaatgggc
ggcatctctttcatgacctcccgatcctcgctccacgatctgcacttcct
tctctcctccccctacctcacctcctcctccctccacccctccctcctcc
cccttctccaagagtggcgggctggtgacatctccactgtcgggataagc
agcaaccccaacaccgacccctccctccctcccccctctcaccctacctc
cttagcctcgacaatatccgcagcatcgcaaacgaagtcctcctctccct
cttcatccagGCGGACGATCCCGCCCTGGAGAGAATATGGGGATGGTACG
AAGAGGAGGAGGAGGAGGGCGGGAGGGAGGGAGGGAGAGACTTGGAGTTG
GTGAACATCCGCAAACGCGGGGCACTATGGGGAGCCAATGAGGAGGAGGA
GGAGGAGGAGGAAGATAGGGAGGGAGGGAGGAAAGGAAAGGTGATGGTGC
CTCCAGTGACGGTAAATACAAAGCGGCTTAGGGTGGAGGAGCAGAGAAAG
GAGAAGGAGACAGAGAGGGAGGAAAAAGAGGAGAAGAATTCGGTGCTGCA
TCCTCCCTCCATCCTTCCCTCGCTCCCTCAACCTACGGGAAGAGCTAAGG
AGGTGCTTAAGCCCTCTTCATCGCCACCCTCCTCTTCCTCCCCCTCTTCT
TCCACCGCTTCCTTCTTGATAACCCCAACCAAGCCCAAAATCGGCAATGC
ATTCAAAAGCAGCAGGGGAGGAGGAGGAGGAGGAAGGGAAGGAGGAGGAG
GAGAAGGTGGTGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGGGCTCTTA
GACGAGTTTTTCAAGCTTCGCCACCCTCCGCCCCGCCCTCTTTTCTCTCT
GCCCAGCAGTAGCAGCAGCATCATCAGCAGCAACAACAACAACAGCAGTA
GCTACGgtgatgaggcacaacaccaagctcagcatctctcttcctcctcc
aatgcctccgcctcttccttcttctcctcctcaagGACCGGCCCCCTTTC
CTGCATCCCCATCGCCCATCCCTCCCTCACTCCTTCATTCTCCCCCCCTC
CCTTCCTCGCCCCCCCCTGCCACCTGCTTGATCGCCGAGCGTCTGCTTGA
TCTGGAGGACGGCGCCTTTGTGGCTGGACTTGCCCACACCCACAATATCA
CCGTCGTGGATGTCCCTCTGCCCCTCTCTAATGGCGGAGGGGGAGGGAGA
GAGGGAGGGAGGGGGGGAGGGATCGATCTGGTCTTGGATGAGCGCACGGG
AATGCGCTTGCTGGGGTTGACGGACATTGTCGCAAGTGCAGCGGATCCGG
CGTTCAAGGCCTACAAGCAGGCGATTAAGGATTTGATTGATTGCAGCTTG
AGATATGACTTGCTATTTCTGGTGCTCTTGCCCGAGGGGGATCCCTTGCT
GCATGCATCGACGATACGGGCGATTCATAATTCGTTCTTCAATTCACGGG
CGGAGGTGATTGTGCGGGTGGCGGGTTCAGGGAGGAGGGAGGGAGGGAGG
GAAGGAGGGAGGGAGGGGGTGGGTTTGGAGGGAGGGACGACGGGGAGTCT
GCAGAGGATTGTGCGGCTGGCGGTGGAGGAGACGCAGAGGAGGCGGAGGG
AGAGAAAGACGGCGAGTGCTGATGGAGATACCTGGCTCCAGCGGGCGACG
TCGCGGATCGAAATTgtgagtggtcactcccctcctttccttcttccctc
cctccatccgtccctttctttatccgtccctctctccccgaaccccctct
caacctccccattccccctcccagGTCGACCAAGCATCCTTCTTGGCCTC
TTTTCCCTCCCTCAACATGTGGTCTGCCCTGCTCATGCTCCATTCTATGC
CCCTTCGCCGCCTCCTCTCCTCCCCTCCCTCCCTCCTACATTCCGCCTTC
CCCACCCTCCCCAAGTCGGCCTTGGACATGTTCTCGTCTCTCTGTCACGT
TGATTTGTCTCGTCGGGCTGTAGGCCATCTGGCATCACTCTTGCCCGCGG
GGGATGAGGAGGAAGACGAGGGGAAAGGGGATGAGTATAGTGGTTGGCGG
ATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGTG
GGTTCGCGGGACAATCACGCCGTCGATCTCTAACTTTGAACATCAGCAGC
TTCAGCGTCATCAGCAACATCATCATCACCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTGCCTTCCTCCCTCCGT
TGCCCGCGATGCCTACTACCAGCAGCGCCAGCAGAGTTCCGACTACCCTT
CAGGCCCCCCCTCCCTTCACCCCCTTCCTCCTCCTCCTCCACCATATCAG
CACAACCAAGAGCACCAACAGTACCAACAACCAAAGCAGCCACAGCAGCA
GTTCTATTACCATCCCTTTTCCGACCAGCCTCAACGACGACGAGGACCAA
AACGCCCCTCCCCACTTCATACCTATCACCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGTATCGCCAGCAGCAGCAGCGGTGGGAACCGCAAGGTGG
TGTCGCCCATGCAAACTTTCCCTCGTCTTCTCCCTCCTCCTCCTCTTTCT
CCTCCTCTTTTTCACCCGCCTCTTCCTCCTCCTCTTCCTCCTCATCCCCC
TTCCCACCTTCTCCTGTCGGGCCTTTGCCTGTCGAGACGAATCGAAAGCG
AGCAAAGGTGGGATTAGACTGGTCGCCCGTTGCGACGGGAGGACAGAGAG
GGCAGACGCGCCTGCGGTTTTTGCCGAGGGAAGGAGGGAAGAATTGATCG
AAGGAAGGAAGGAAAAGGGTGCGGTGCAGAGTCAAACGACGATTAAATGA
ACGAGTAAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGAGGAGGAGGGGCA
GCAACAGCAGAGGCACGTTTGAATACATGCAGGAGCGAGGTAGTTCAACA
GGAGTAAGAAGGAAAAAACAATCGACGGAACACAAGGTGTAAGGATCCTG
CCCAGCATGTTGCCCCATCCATACTCGCAAAAAAAGAAGATTGGCAGCGA
AATACAGAGAAAGATACGAGAGGGCATGGCAGCAGGAGCAGCAGCAGATG
AAGCAGCAGCAGTTGAAGCAACAGCAGTTGAAGCAACAGCAGTAGCAGTA
GCAGCAGCCAAAAACCAAAATAAAAGAGAACAGAAGAGAGCACCGATGAG
ATCGTGTACAATTGTTTCTTCCTCGGTCTTTAACTGCATCTAACGTGGTG
TCGACTCACCACCTCTTTCCTATCTTCTACTTCTCGCCCTCCCTCCCTCC
GATCCGCATGGGTGCAGCCAGCTGCACCACGGGAAAGTGAAGAAAGAACC
ACTACTTCTCGTGCGAATGTGTTTTTCTGGAAATCGTTCAATGCCGTCTC
TATTCCGAAAGCCGCGCTTTCCTATTTTCCCCCTACCCTCCCTGTCCCTA
TCTCCCTCCCTTCTCCCCTCTATTCCCCATCCAACACACACCCCCTCTCT
GTGTGTCTTCCTCGAGCCATTTCTGTAACCACCTTTTCCTGTCTCTGAAA
TTATTCTCTTGATCACTAAACAACTAAATCCCTTCTTCCGCTTGGTGGTT
CCAAGCCCTTCCTCCCTCCCTATCCCCCTC
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protein sequence of NO05G04960.1

>NO05G04960.1-protein ID=NO05G04960.1-protein|Name=NO05G04960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1309bp
MRKRRGGGGGGVGGGREGMGWDEEEGMNEEEDEEEYEEEEIEGVERAEMR
AVAAEADRMAQSLCLPAREAMEEVGQISILWKRGREGGRGRTAGTIRFVC
DPLADDVTPGGSSYALRLFVEAHAREAVALCFEGEGGREGGREGGREGRT
PFLPLVTDRSCHLSTPEYPSRTLSSDAFGSHFVDHSSLSFSSSSFSSSSS
FSSSSFSSSSSFSSSSSLPLQTDLEQKREGEGQKEKGREDTGQMAMLDEL
LAPAKAEVAAKGYGGGGEGGRDDGARGDAHAAWVLRRGPQPLERIEVGEE
GKGEEKVMGEAMEMSEEKAGEENKRTRDQQQQWRLTSMVAEVLVACLEGG
REGGGGEGGGMIILSPPPLLIAERGLALWRGEGEKKDRDPSSSPSSSSSS
SSPSSNFFPSSFPLSTFSYLAPCFAPNTKEEDEEKEGNKEGREEGREEDL
ESLLQIMAPSADEDDLFLPPPPNYPRLPEEEGGEEEEEEEEEGEDNKAAA
TAATAVTASSSAAAATAVKDDDNAMVADDPALERIWGWYEEEEEEGGREG
GRDLELVNIRKRGALWGANEEEEEEEEDREGGRKGKVMVPPVTVNTKRLR
VEEQRKEKETEREEKEEKNSVLHPPSILPSLPQPTGRAKEVLKPSSSPPS
SSSPSSSTASFLITPTKPKIGNAFKSSRGGGGGGREGGGGEGGGGGGGGG
GGGGLLDEFFKLRHPPPRPLFSLPSSSSSIISSNNNNSSSYGPAPFPASP
SPIPPSLLHSPPLPSSPPPATCLIAERLLDLEDGAFVAGLAHTHNITVVD
VPLPLSNGGGGGREGGRGGGIDLVLDERTGMRLLGLTDIVASAADPAFKA
YKQAIKDLIDCSLRYDLLFLVLLPEGDPLLHASTIRAIHNSFFNSRAEVI
VRVAGSGRREGGREGGREGVGLEGGTTGSLQRIVRLAVEETQRRRRERKT
ASADGDTWLQRATSRIEIVDQASFLASFPSLNMWSALLMLHSMPLRRLLS
SPPSLLHSAFPTLPKSALDMFSSLCHVDLSRRAVGHLASLLPAGDEEEDE
GKGDEYSGWRMQQQQQQQQQQQQQQQWVRGTITPSISNFEHQQLQRHQQH
HHHQQQQQQQQQQQQQQQQQLCLPPSVARDAYYQQRQQSSDYPSGPPSLH
PLPPPPPPYQHNQEHQQYQQPKQPQQQFYYHPFSDQPQRRRGPKRPSPLH
TYHQQQQQQQQQQQYRQQQQRWEPQGGVAHANFPSSSPSSSSFSSSFSPA
SSSSSSSSSPFPPSPVGPLPVETNRKRAKVGLDWSPVATGGQRGQTRLRF
LPREGGKN*
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Synonyms
Publications