NO05G04640, NO05G04640 (gene) Nannochloropsis oceanica

Overview
NameNO05G04640
Unique NameNO05G04640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3647
Alignment locationchr5:1209125..1212771 -

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Properties
Property NameValue
DescriptionNad-dependent epimerase dehydratase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1209125..1212771 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006694steroid biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR0022253Beta_OHSteriod_DH/Estase
Homology
BLAST of NO05G04640 vs. NCBI_GenBank
Match: XP_005855721.1 (nad-dependent epimerase dehydratase family protein [Nannochloropsis gaditana CCMP526] >EKU20643.1 nad-dependent epimerase dehydratase family protein [Nannochloropsis gaditana CCMP526] >EWM27949.1 nad-dependent epimerase dehydratase family protein [Nannochloropsis gaditana])

HSP 1 Score: 560.5 bits (1443), Expect = 4.000e-156
Identity = 273/367 (74.39%), Postives = 310/367 (84.47%), Query Frame = 0
Query:    1 MASAAPTIKVVVTGGGGFLGRYLCQTLLRRKRLNGRALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFGPASEVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVIXXXXXXXXXXXXXXDYPLFSV 368
            M SA P++KV+VTGGGGFLGRYLCQ LLRRKRLNGRAL+SIAIL D   DTH+PCDTKVQVFP+GPTN ASS IR+E++RGDITDRKLV++ + PG   G V +FHLAS+MSG+GE +FDKC++VNLDGT+N+LE+ARALHA G+ G +PVRFVFPSS AAFGP  EV+DETK  PQSTYG TK +GEL++ND+TRKGW+DGRTGRLPTVIVRPGN NGA+TGCFSAVVRE+LMGHDYVIP DPRQ+HPVIS RRTIK LLALAEVE E LG DRSVNLPALQTTM+ELLFHTRQIAQGRGIP+GEV VK+DP VS IVG  PQVM S RA+ LG PRDGSVEAVI              DYPLFS+
Sbjct:    1 MVSALPSVKVLVTGGGGFLGRYLCQVLLRRKRLNGRALDSIAIL-DTGADTHVPCDTKVQVFPHGPTNQASSAIRVENFRGDITDRKLVEKAMQPGSEGGHVTIFHLASVMSGEGEEEFDKCVAVNLDGTQNLLEKARALHASGRVGEKPVRFVFPSSFAAFGPHPEVSDETKLTPQSTYGMTKAVGELMVNDYTRKGWVDGRTGRLPTVIVRPGNKNGASTGCFSAVVRELLMGHDYVIPYDPRQTHPVISTRRTIKGLLALAEVEGESLGGDRSVNLPALQTTMEELLFHTRQIAQGRGIPMGEVSVKIDPWVSGIVGRFPQVMRSPRAETLGLPRDGSVEAVIEDYVDEFLDDEMKDDYPLFSI 366          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: OUR76979.1 (hypothetical protein A9Q83_12180 [Alphaproteobacteria bacterium 46_93_T64])

HSP 1 Score: 233.4 bits (594), Expect = 1.100e-57
Identity = 134/342 (39.18%), Postives = 199/342 (58.19%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRRKRLNGRALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFGPASE---VNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +KVV+TGG GF+G  + + L++R  L G + +   I   +  D  +P      V P+G       + R+E   GDI+D + V+ +++       + VFHLAS++SGQGE  FD  +SVNLDG RNILE ARA        G P + +F SS+A FG       ++D +K+  Q+TYG TK +GELL+ND+TRKG+IDGRT RLPT+ +RPG  N AA+   S V RE L G   V+P+      P++  RR ++  +AL EVES+ LG DR++NL     ++ E++    ++A    I + ++ V  DP +  IV G    ++S RA+ LG P D S++  +
Sbjct:    1 MKVVITGGAGFIGLNIARELVQRNTLTGPSGQVEPISSIVLFDVTVP-----SVRPHG------LDERVELIAGDISDAETVRSLID----QDDISVFHLASVVSGQGELDFDLAMSVNLDGARNILEAARA------RNGTP-KVIFASSVAVFGGRDMPKILSDTSKQTSQTTYGITKTIGELLVNDYTRKGFIDGRTARLPTIFIRPGKPNAAASSFCSGVFREPLNGVPCVLPVQKDVVMPLLGYRRCVESFIALHEVESDLLGDDRAINLRNRSYSVAEMIDAVTRVAATNDIQLADITVSPDPDIEEIVNGWAAYLNSTRAEELGLPIDDSLDQAV 320          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: OUU69782.1 (hypothetical protein CBC27_09835 [Opitutae bacterium TMED67])

HSP 1 Score: 230.7 bits (587), Expect = 7.200e-57
Identity = 132/342 (38.60%), Postives = 198/342 (57.89%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRRKRLNGRALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFGPA---SEVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +KV++TGGGGFLG  L   LL+++ L GR+ +   I   I  D + P               ++S+ R+  + GDI+D   ++ +      S  + +FHLAS++SG+ E Q+D  + VNLDG RNI E AR ++      G+P R VF SSIA+FG A   + ++D  K+ PQ+TYG TK + ELLIND TRKG  DGR+ RLPTVI+RPG  N AA+   S + RE L G    +P+   QSHP+   +  ++  +AL E++  KLG DR+  LPAL  T +      ++I+  + + IG++    +P + SIV   P  +   RA+A+G P+  S++ +I
Sbjct:    1 MKVIITGGGGFLGSQLANHLLQKETLTGRSGKQEEIKQIILFDKNFPV--------------SNSDNRIREFSGDISDLNPIKLI---NEKSESISIFHLASMVSGECEVQYDDAIRVNLDGGRNIFEMARTIN------GRP-RVVFASSIASFGGAAMPAPISDIAKQTPQTTYGMTKAICELLINDHTRKGHFDGRSARLPTVIIRPGKPNAAASSWASGMFREPLKGEVCKLPVKRNQSHPITGFKTVVESFVALHEIDEAKLGDDRAYGLPALSVTPNIAEKVLQEISTEKKMKIGKIEDAFEPKIQSIVDNWPTAVDGFRAEAIGLPKPPSLKKII 318          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: PPR73608.1 (putative epimerase/dehydratase [Alphaproteobacteria bacterium MarineAlpha3_Bin2])

HSP 1 Score: 229.2 bits (583), Expect = 2.100e-56
Identity = 141/342 (41.23%), Postives = 186/342 (54.39%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRRKRLNGRALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFG---PASEVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +K+V+TGG GFLG  + + L+ R  ++   L           D H+P        PNG  +      R+    GDI+DR  V  +++       + VFHLAS++S  GE  FD  + VN DG R+ILE  RA        G P R V  SS+A FG       V + T+ VPQ+TYG TK +GEL+IND+TRKG+IDGR  RLPTVI+RPG  N AA+G  S V RE L G DYV+P+       VI AR  I  L  L + + E LG DR VNLP     + +++    ++A   GI  G V  K DP + +IV   P  M   RA+ALG P D S+EA+I
Sbjct:    1 MKIVITGGCGFLGVGIARKLMDRPEIDSLVL----------FDAHVP-----DALPNGLDD------RVTMVEGDISDRVQVAAIID----RDDIGVFHLASVVSAGGEQDFDLAMRVNFDGGRHILEALRA------RKGTP-RIVLASSLAVFGGPDMPEAVTEMTRVVPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGAPNAAASGFASGVFREPLSGQDYVLPVAMDTRMMVIGARSAIAGLTGLMDADGEGLGADRVVNLPNNAYAVTDMIAALERVAAENGITFGPVTPKPDPAIEAIVKSWPLAMEDSRARALGLPADESLEAII 310          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: PPR66404.1 (putative epimerase/dehydratase [Alphaproteobacteria bacterium MarineAlpha3_Bin1])

HSP 1 Score: 228.8 bits (582), Expect = 2.700e-56
Identity = 141/342 (41.23%), Postives = 186/342 (54.39%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRRKRLNGRALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFG---PASEVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +K+V+TGG GFLG  + + L+ R  ++   L           D H+P        PNG  +      R+    GDI+DR  V  +++       + VFHLAS++S  GE  FD  + VN DG R+ILE  RA        G P R V  SS+A FG       V + T+ VPQ+TYG TK +GEL+IND+TRKG+IDGR  RLPTVI+RPG  N AA+G  S V RE L G DYV+P+       VI AR  I  L  L + + E LG DR VNLP     + +++    ++A   GI  G V  K DP + +IV   P  M   RA+ALG P D S+EA+I
Sbjct:    1 MKIVITGGCGFLGVGIARKLMDRPEIDSLVL----------FDAHVP-----DALPNGLDD------RVTMVEGDISDRVQVAAIID----RDDIGVFHLASVVSAGGEQDFDLAMRVNFDGGRHILEALRA------RKGTP-RIVLASSLAVFGGPDMPEAVTEMTRVVPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGAPNAAASGFASGVFREPLSGQDYVLPVVMDTRMMVIGARSAIAGLTGLMDADGEGLGADRVVNLPNNAYAVTDMIAALERVAAENGITFGPVTPKPDPAIEAIVKSWPLTMEDSRARALGLPADESLEAII 310          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: PCH84336.1 (NAD-dependent epimerase [Rhodospirillaceae bacterium])

HSP 1 Score: 227.6 bits (579), Expect = 6.100e-56
Identity = 140/342 (40.94%), Postives = 185/342 (54.09%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRRKRLNGRALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFG---PASEVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +K+V+TGG GFLG  + + L+ R  ++   L           D H+P        PNG       + R+    GDI+DR  V  +++       + VFHLAS++S  GE  FD  + VN DG R+ILE  RA        G P R V  SS+A FG       V + T+ VPQ+TYG TK +GEL+IND+TRKG+IDGR  RLPTVI+RPG  N AA+G  S V RE L G DYV+P+       VI AR  I  L  L + + E LG DR VNLP     + +++    ++A   GI  G V  K DP + +IV   P  M   RA+ALG P D S+ A+I
Sbjct:    1 MKIVITGGCGFLGVGIARKLMDRPEIDSLVL----------FDAHVP-----DALPNG------LDXRVTMVEGDISDRVQVAAIID----RDDIGVFHLASVVSAGGEQNFDLAMRVNFDGGRHILEALRA------RKGTP-RIVLASSLAVFGGPDMPEAVTEMTRVVPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGAPNAAASGFASGVFREPLSGQDYVLPVAMDTRMMVIGARSAIAGLTGLMDADGEGLGADRVVNLPNNAYAVTDMIAALERVAAENGITFGXVTPKPDPAIEAIVKSWPLTMEDSRARALGLPADESLXAII 310          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: EDY17070.1 (NAD-dependent epimerase/dehydratase [Chthoniobacter flavus Ellin428])

HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55
Identity = 137/347 (39.48%), Postives = 191/347 (55.04%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRRKRLNG-----RALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFGPAS---EVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +KV++TGGGGFLG  LCQ LL+R +L G       +E I +LD IF     P   K              + R+    GDI++R +V   +   P    V +FHLAS++SG+ E +FD  L VNLDG RN+ E ARA+       G+P R VF SSIA FG  +     +D TK  PQ+TYG TK M EL++ND++RKG+ DGR+ RLPTVIVRPG  N AA+   S + RE L G   ++PI   Q HP+   R     L+AL EV +++   DR++ LPA + T         ++A+ R + +G +V   D  +  IV   P  +   RA ALG P    ++ ++
Sbjct:    1 MKVIITGGGGFLGSQLCQKLLQRGQLTGPSGSSEPIEEIVLLDAIF-----PRPAK--------------DARVRQVSGDISNRAVVLSAIGSDP---AVAIFHLASMVSGECEERFDDALRVNLDGGRNVFEAARAV------PGKP-RVVFASSIACFGGEAMQDPNSDRTKLTPQTTYGMTKAMCELMVNDYSRKGFFDGRSVRLPTVIVRPGKPNAAASSWASGMFREPLNGETCLLPIRREQCHPMTGYRTVTDSLIALHEVPAKQFRDDRAIGLPAHRVTPQLAAAVIEEVARERSLKLGPIVDAFDARIQGIVDNWPVAVDGARALALGLPHPPPLKQIV 318          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: WP_083805357.1 (hypothetical protein [Chthoniobacter flavus])

HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55
Identity = 137/347 (39.48%), Postives = 191/347 (55.04%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRRKRLNG-----RALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFGPAS---EVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +KV++TGGGGFLG  LCQ LL+R +L G       +E I +LD IF     P   K              + R+    GDI++R +V   +   P    V +FHLAS++SG+ E +FD  L VNLDG RN+ E ARA+       G+P R VF SSIA FG  +     +D TK  PQ+TYG TK M EL++ND++RKG+ DGR+ RLPTVIVRPG  N AA+   S + RE L G   ++PI   Q HP+   R     L+AL EV +++   DR++ LPA + T         ++A+ R + +G +V   D  +  IV   P  +   RA ALG P    ++ ++
Sbjct:   19 MKVIITGGGGFLGSQLCQKLLQRGQLTGPSGSSEPIEEIVLLDAIF-----PRPAK--------------DARVRQVSGDISNRAVVLSAIGSDP---AVAIFHLASMVSGECEERFDDALRVNLDGGRNVFEAARAV------PGKP-RVVFASSIACFGGEAMQDPNSDRTKLTPQTTYGMTKAMCELMVNDYSRKGFFDGRSVRLPTVIVRPGKPNAAASSWASGMFREPLNGETCLLPIRREQCHPMTGYRTVTDSLIALHEVPAKQFRDDRAIGLPAHRVTPQLAAAVIEEVARERSLKLGPIVDAFDARIQGIVDNWPVAVDGARALALGLPHPPPLKQIV 336          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: WP_088348918.1 (MULTISPECIES: NAD-dependent epimerase [Rhodomicrobium])

HSP 1 Score: 224.2 bits (570), Expect = 6.800e-55
Identity = 129/341 (37.83%), Postives = 192/341 (56.30%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRRKRLNGRALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFG--PASEVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +++V+TGG GF+GR L + LLR     G       I + +  D   P        P  PTN      RL+   GDITD   V+ ++ PG GS    ++H A+++S   E   D   +VNLDGTR++L  AR L A       P R VF SS A +G  P   V+DET   P+++YG  K  GEL +ND+TR+G +DGR+ RLPT++VRPG  N AA+   S+++RE L G   + P+ P     ++S RR I CL+AL E++ + LGF+R+V LP++  ++ E+    R+I  G       ++ + DP +  IV G P  M + RA++LGF  D +++ +I
Sbjct:    1 MRIVITGGTGFVGRKLAERLLRDGAAAGPGGARQEISEVVLFDQAEPMP------PIEPTN------RLKIVTGDITDAAQVEALITPGTGS----IYHFAAVVSAGAEADLDLGYAVNLDGTRHVLNAARKLPA-------PPRVVFASSAAVYGGEPPLTVDDETPPTPRTSYGAQKAAGELFVNDYTRRGIVDGRSVRLPTIVVRPGRPNKAASTFASSMLREPLAGQTAICPVSPASRMAILSPRRLIDCLIALHEMDGDDLGFNRTVLLPSISVSIGEMADSLRRI--GGEAAAARILWEPDPFIQKIVDGWPGAMLAQRAESLGFKADANMDEII 316          
BLAST of NO05G04640 vs. NCBI_GenBank
Match: PPR63819.1 (putative epimerase/dehydratase [Alphaproteobacteria bacterium MarineAlpha3_Bin3])

HSP 1 Score: 220.7 bits (561), Expect = 7.500e-54
Identity = 130/345 (37.68%), Postives = 190/345 (55.07%), Query Frame = 0
Query:    8 IKVVVTGGGGFLGRYLCQTLLRR---KRLNGRALESIAILDDIFGDTHIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSGGVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQPVRFVFPSSIAAFGPAS---EVNDETKRVPQSTYGTTKVMGELLINDFTRKGWIDGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPVISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGRGIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVI 347
            +K+V+TGG GFLG  + + L+ R   ++  G   +   +   +  D  +P +      P+G  +      R+    GDI+DR  V  +++       + VFHLAS++S  GE  FD  + VN DG  N+LE  RA  +         + VF SS+A FG  +    VND T+  PQ+TYG TK +GEL+IND+TRKG+IDGR  RLPTVI+RPG  N AA+G  S V RE L G+++V+P+       V+  R  +  L+ L + + + LG DR V LP    ++ E++     +A  +GI +G +  + DP   +IV   P VM   RA+ALG P D S+E VI
Sbjct:    1 MKIVITGGCGFLGLGIARKLIERQEARKAEGLTGKQQEVESLVLFDAQVPDE-----LPDGLDD------RVSLAAGDISDRGQVTALID----RDDIAVFHLASVVSAGGEQDFDLTMRVNFDGGHNVLEACRARDS-------VPKVVFASSLAVFGGEALPDTVNDMTRVTPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGPPNAAASGFASGVFREPLAGNEFVLPVGMGTKMMVLGTRNAVAGLIGLMDADGDALGGDRMVGLPNNAYSVAEMITALEAVAADKGISLGPITPRPDPATETIVTSWPLVMDDARARALGLPADESLERVI 323          
The following BLAST results are available for this feature:
BLAST of NO05G04640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855721.14.000e-15674.39nad-dependent epimerase dehydratase family protein... [more]
OUR76979.11.100e-5739.18hypothetical protein A9Q83_12180 [Alphaproteobacte... [more]
OUU69782.17.200e-5738.60hypothetical protein CBC27_09835 [Opitutae bacteri... [more]
PPR73608.12.100e-5641.23putative epimerase/dehydratase [Alphaproteobacteri... [more]
PPR66404.12.700e-5641.23putative epimerase/dehydratase [Alphaproteobacteri... [more]
PCH84336.16.100e-5640.94NAD-dependent epimerase [Rhodospirillaceae bacteri... [more]
EDY17070.11.800e-5539.48NAD-dependent epimerase/dehydratase [Chthoniobacte... [more]
WP_083805357.11.800e-5539.48hypothetical protein [Chthoniobacter flavus][more]
WP_088348918.16.800e-5537.83MULTISPECIES: NAD-dependent epimerase [Rhodomicrob... [more]
PPR63819.17.500e-5437.68putative epimerase/dehydratase [Alphaproteobacteri... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003391NSK003391Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04640.1NO05G04640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585189gene_3280Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g124gene2627Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04640.1NO05G04640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04640 ID=NO05G04640|Name=NO05G04640|organism=Nannochloropsis oceanica|type=gene|length=3647bp
TCTTCTCGTATCGAAAGTGCTTTCTTCTTTTGTTCGTTCTTCTTCGCCGC
CATTCTAAAACACCCTTCCTCCCTTCCTCCCCCCACCAACCCCGCCCTCT
ACTCGTCGTCCCTCCCCTCCGGCGGCGTCAGCGGGTCCACATCCGGCGCT
TGGGCCGTTATCTCCTTCGGATAGGTGATTCCCTCCTCGGGGACAAATGT
AGGAATAGGTGGAGGGGCAGGGAAACGCGCACCCTTCACGGCATCGGTGA
CACGGACGAAAGCCCCCTTGTTGCCGGGAATGTGGCCTTTAATGTAGAGG
AGGTTGCGTTCCGTGTCAATCTTGTACAGCCAGAGGTTCTGGACCGTCAC
TCGTTTCCCCCCCATCCGGCCCGGCATCTTCTTGCCCTTAAACACGCGCC
CAGGGGAAGTGTTTTGTCCCGTGGACCCCAGAGAACGGTGCGAGACAGAG
ACGCCGTGGGAGGCACCTTGGCCTTTAAAACCCCATCGTTTCATCACACC
TTGAAATCCCTTCCCCTTGCTCGTGCCCGCCACGTCCACCAGTTGCCCCG
GAACAAAGTGCTGCGCCAGCACGGGCGTGCCTGGTAAGAGCAGTGCATCG
GGCGTCACCCTAAACTCCCACAATTTTCGCTTGGGTGGTGCAGTCCCATC
CCCATCAATCCACCGGTCGAGGTGTCCTCTTTCGGGCTGAGAGATGTTTT
TTGATTTCTTTTCGCCTGCACCCAGTTGGACTGCAGTATACCCGTCTGTC
GCGTCCTTCTTGATCTGCAACGCTTGCACTGAATCGAGCGCAAGGATTGT
ACATGGGTACCGTTGCCCCCACTGGTCGTATACACCCATCATGCCGACCT
TCAAGGCGATGGCGCCCGTGCGGCGGGTGGGGGGAGGGGTGGCATTAGTG
CTGCTGCTGGACGTGCCTGGCGCCTTGCCCACCCGGGGTTCAAAGCTCAT
GCTGTCCATGAGGCGGGTGGCGGTGGAGAGGGAGGCGGCCGACGACGCTT
GGGAGGAGGGGGGTGGTGGTAGCCGACGGAGGAGGGGCGAGTAGGGGGAT
GAGGAGGAGTAGGAAGAGGAAGAGGAGGAGGGGAAAGGGGAGGAGGCAAG
GAAGGTTTTTCTGGTAGTGGCGGCCGTGCTGCCGCCATTGCACACCAGGA
GACGCCGCATACTTGACCACGGCTCCGCGCTGGCAACTATGTAAAGAGTA
CAGGATGGATAAGTTACTCGAGGCAGAACGCGTAAAACAAGCAAAGGCCA
GGTCTGAACGAGGGTCATGATGCAGCAGCCGTGAACAAGGGGGTGCCCGG
ATGATTGATTGGAAACCCGTGGAAACCTCCCACGCTCGGACGACACCTAA
CTCTTTCCAATACCACACCGGCACGCAGGGTTTAAAGAGCCAACACCAGC
AGGATGACTACACCAGTCTCCTTCTTCCACATCTGCCTTTACCAGGGCAT
CCTCCTGGCTTGGCTGTGCTATAGCCTCTGGAAGCTGCTGGCTGCTTGCC
TGCTGCCTCCTAACTTTTTTGAAGCATGAAGATCAAGAACAACAGGGCAG
AGACCTTTTCCCAGTAGCGACCCTCGCCACCAATTATGAAAGTACATACC
CACGGCGCATGTACACACATAAAATTTTATCGCTTTACCTCTTGAACGAT
CACGAGGCAGCGTTGCTGGTGCGCGCACCAAAGGCCTGCTGCTGTCTCAC
AACATTGGTTCACGCGCTTTCCAGCTGCTTCAACTTCGGCATGCACACTC
AGCCACTTCTCCCGACATCACTTACACGACACAGGTGCGCAGGAGGTGGT
GGGCCAAGAAGCAGCAGTAGAGAGTATCATTAGCAGCACCGGCAGCGACA
GCACATCAGCACTGCGCGAAGTCAAGCACAAGCAAGAAAGGATCCGCACC
ATTCCTTCCTCAATTTTATGGCGTCTGCAGCACCCACCATCAAAGTGGTG
GTCACAGGAGGCGGAGGCTTCTTGGGACGATATCTATGCCAGACACTGCT
ACGACGGAAGCGATTGAACGGCCGAGCCCTGGAGAGTATTGCCATTCTTG
ACGATATTTTTGGAGATACCCACATTCCCTGCGACACCAAAGTCCAGGTG
TTCCCCAACGGGCCTACCAACGGTGCCTCCTCCAACATTCGCTTGGAGAG
CTACCGAGGAGACATTACCGATCGGAAGCTCGTACAGGAGGTGTTGAACC
CGGGACCAGGCTCTGGTGGGGTGGTGGTATTTCACCTGGCCTCGATCATG
AGCGGACAGGGAGAGACGCAGTTTGACAAGTGCTTAAGCGTGAACCTCGg
tacgtccgcttccatacttattttgggggatgatatggttttaatgcata
ttaccgtgcggtcatgacgtaaactcatctttccttccttccttcctcct
tcctttccccctcctccctttcctcccgccctcgacaccagACGGCACCC
GCAACATCCTCGAAGAAGCCCGAGCCCTCCACGCCCAGGGTCAAGCTGGG
GGACAACCCGTGCGTTTTGTCTTCCCCTCTTCCATTGCTGCCTTCGGCCC
CGCCAGTGAAGTAAACGACGAGACCAAGAGAGTGCCTCAGAGCACGTACG
GGACAACGAAAGTAATGGGGGAGCTTTTGATTAATGATTTTACTCGCAAG
GGGTGGATCGATGGAAGGACGGGGAGGCTGCCTACAGTGATTGTGAGGCC
GGGTAATGTGAATGGTGCAGCGACCGGGTGTTTCTCGGCCGTGGTCCGAG
AGGTGCTGATGGGACATGACTATGTCATTCCTATCGACCCGCGCCAGTCA
CATCCAGTGATTTCTGCGAGACGGACGATAAAGTGTTTGTTGGCTTTGGC
TGAGGTCGAAAGTGAGAAGTTGGGATTTGACCGAAGTGTTAACTTGCCGG
CGTTGCAGACAACGATGGATGAGCTCTTGTTTCACACTCGGCAGATTGCG
CAGGGGAGGGGTATTCCAATAGGGGAGGTGGTTGTCAAGGTGGATCCATT
GGTGAGCAGCATTGTCGGAGGCATGCCACAGGTCATGCATAGCCACCGGG
CGAAGGCGCTAGGTTTTCCGAGAGATGGGAGTGTGGAGGCGGTGATTGAA
GAATATGTGGACGAATTTTTGGATGATGAGATGAAGGATGATTATCCACT
TTTTTCTGTGTAGACCGGGATGGGTAGGGAGCGAAGAAGAGTGAGAGGGA
GGATGACTGTAATAATTTGGAATCTTTGGAAGATAAGAGTGTTTCTGCTT
TTGTTCCAAGGAGGAGGGATGAAGGACATGGGCGTATTGTGAAGAAATGG
AGAAGAGAAAGGAAGGGGGGAACGCACGTGTCTTTGTACAGGCCAGCGGA
GATTGCATGTTATCGAAACTTGCGGAAGACGAAAGAATAGGAAGTGCACC
ACCCGTAGTATTATTTTCAACGAATAAGAGTTTTAAACCGATAATGATCA
AGATAGAGAGATGTTTAGAGGAAGTCCAAGAGCGTCAGAGTGGGGGAGGA
GAAAAATGGAGAGAAGTGGGTGCACCAAAAAGAGCCAGTAACGACGAGTA
ACCATAAAGACCAGGAGAAATTACGGGAAAAAGAATAACGCAACATACAT
AACAGTAAATCGGGACAGATGCGATCATTGCTTTTGGCCCTGTGGCG
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protein sequence of NO05G04640.1

>NO05G04640.1-protein ID=NO05G04640.1-protein|Name=NO05G04640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MASAAPTIKVVVTGGGGFLGRYLCQTLLRRKRLNGRALESIAILDDIFGD
THIPCDTKVQVFPNGPTNGASSNIRLESYRGDITDRKLVQEVLNPGPGSG
GVVVFHLASIMSGQGETQFDKCLSVNLDGTRNILEEARALHAQGQAGGQP
VRFVFPSSIAAFGPASEVNDETKRVPQSTYGTTKVMGELLINDFTRKGWI
DGRTGRLPTVIVRPGNVNGAATGCFSAVVREVLMGHDYVIPIDPRQSHPV
ISARRTIKCLLALAEVESEKLGFDRSVNLPALQTTMDELLFHTRQIAQGR
GIPIGEVVVKVDPLVSSIVGGMPQVMHSHRAKALGFPRDGSVEAVIEEYV
DEFLDDEMKDDYPLFSV*
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Synonyms
Publications