NO05G04610, NO05G04610 (gene) Nannochloropsis oceanica

Overview
NameNO05G04610
Unique NameNO05G04610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1819
Alignment locationchr5:1202384..1204202 -

Link to JBrowse

Properties
Property NameValue
Description3-hydroxyisobutyrate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1202384..1204202 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004616phosphogluconate dehydrogenase (decarboxylating) activity
GO:0051287NAD binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR0089276-PGluconate_DH_C-like
IPR0061156PGDH_NADP-bd
IPR029154NADP-bd
Homology
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: WP_058778732.1 (3-hydroxyisobutyrate dehydrogenase [Pseudomonas psychrotolerans] >KTS78051.1 3-hydroxyisobutyrate dehydrogenase [Pseudomonas psychrotolerans] >KTT32867.1 3-hydroxyisobutyrate dehydrogenase [Pseudomonas psychrotolerans])

HSP 1 Score: 280.4 bits (716), Expect = 7.700e-72
Identity = 157/289 (54.33%), Postives = 203/289 (70.24%), Query Frame = 0 
Query:   55 MGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQ-TTQIIMTMLPATQHVEAV-VGQ-VLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSV 341
            +GF+GLG MG+ MA NLL K D  + +YD +  A+A LQ +GA +A+S   +A    ++I+TMLPA  HV+ V +G+  LI HA+ GTLLID STIDP +++A A  A  RGLE++DAPVSGG GGA AGTLTFMVGG A   ++A+  +L  MG+ +VHCG  G G VAK+ NNL+LG++MIGVAEAM LG  LGMD   L GV+N+SSGR W +E+ NP P V+P AP+S  YQGGF + LM KDLG+A + A  V   P+ LGAVAQQ+Y      G GG DFS++
Sbjct:    3 LGFLGLGNMGAPMARNLL-KADHQLTVYDVSAAALAALQAEGAEVAASPAAVADGGAEVIITMLPAAAHVKTVYLGEDGLIAHARPGTLLIDSSTIDPLSARAVATAAAERGLELLDAPVSGGTGGAAAGTLTFMVGGSAAGFQRAQP-LLAAMGRNLVHCGTSGNGQVAKVANNLLLGISMIGVAEAMALGTRLGMDAKTLAGVINTSSGRCWSSEVNNPYPDVLPQAPASRGYQGGFAADLMLKDLGLATEAARAV-RQPVILGAVAQQLYQRFSQTGGGGLDFSAI 288
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: WP_058788725.1 (3-hydroxyisobutyrate dehydrogenase [Pseudomonas psychrotolerans] >KTT63681.1 3-hydroxyisobutyrate dehydrogenase [Pseudomonas psychrotolerans])

HSP 1 Score: 280.4 bits (716), Expect = 7.700e-72
Identity = 157/289 (54.33%), Postives = 203/289 (70.24%), Query Frame = 0 
Query:   55 MGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQ-TTQIIMTMLPATQHVEAV-VGQ-VLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSV 341
            +GF+GLG MG+ MA NLL K D  + +YD +  A+A LQ +GA +A+S   +A    ++I+TMLPA  HV+ V +G+  LI HA+ GTLLID STIDP +++A A  A  RGLE++DAPVSGG GGA AGTLTFMVGG A   ++A+  +L  MG+ +VHCG  G G VAK+ NNL+LG++MIGVAEAM LG  LGMD   L GV+N+SSGR W +E+ NP P V+P AP+S  YQGGF + LM KDLG+A + A  V   P+ LGAVAQQ+Y      G GG DFS++
Sbjct:    3 LGFLGLGNMGAPMARNLL-KADHQLTVYDVSAAALAALQAEGAEVAASPAAVADGGAEVIITMLPAAAHVKTVYLGEDGLIAHARPGTLLIDSSTIDPLSARAVATAAAERGLELLDAPVSGGTGGAAAGTLTFMVGGSAAGFQRAQP-LLAAMGRNLVHCGTSGNGQVAKVANNLLLGISMIGVAEAMALGTRLGMDAKTLAGVINTSSGRCWSSEVNNPYPDVLPQAPASRGYQGGFAADLMLKDLGLATEAARAV-RQPVILGAVAQQLYQRFSQTGGGGLDFSAI 288
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: XP_014151878.1 (3-hydroxyisobutyrate dehydrogenase [Sphaeroforma arctica JP610] >KNC77976.1 3-hydroxyisobutyrate dehydrogenase [Sphaeroforma arctica JP610])

HSP 1 Score: 278.9 bits (712), Expect = 2.200e-71
Identity = 156/308 (50.65%), Postives = 203/308 (65.91%), Query Frame = 0 
Query:   45 STSNSSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHV-EAVVGQ-VLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLEGASIE 351
            STSN  +  K+GF+GLG MG  MA+NL+ K    V +YD N  A A L  KGA++A+S  E+A   + ++TM+P + HV +   G+  +I  AK G   ID STIDP AS+   A A  +GL  VDAPVSGG+GGAE GTLTFMVGG+ +S  KA+  +L  MGK +VHCGG GTG VAKICNN+ +G++M GVAE+  LG  LG+D  +L  ++NSS+GR W ++ YNP PGV+   P+S DY+GGF + LM KDLG+A   A       +PLG  AQ VY+ M   G+G KDFSSVY  L+G   E
Sbjct:   49 STSNIVNQ-KVGFVGLGNMGRHMANNLI-KAGHEVTVYDINTTAAASLAEKGAKVANSPGEVASQVETVITMVPNSSHVIDVYEGEGGIIDSAKPGLQCIDASTIDPAASRQVHASATKKGLTFVDAPVSGGVGGAENGTLTFMVGGDDESFAKAKE-VLTDMGKNIVHCGGVGTGEVAKICNNMCMGISMAGVAESFNLGAKLGIDKKVLADIINSSTGRCWSSDTYNPVPGVMEGVPASRDYEGGFGTALMLKDLGLATQAAT-ANQAAIPLGNAAQAVYSTMTAHGYGKKDFSSVYAHLKGDRAE 352
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: OQV18829.1 (3-hydroxyisobutyrate dehydrogenase, mitochondrial [Hypsibius dujardini])

HSP 1 Score: 278.5 bits (711), Expect = 2.900e-71
Identity = 144/294 (48.98%), Postives = 199/294 (67.69%), Query Frame = 0 
Query:   54 KMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVVG--QVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            ++GFIGLG MG+ MA NL+ K    +V++D  P+A+A L+  GA  A S  E+A++   I+TMLP++ HV  V      L+ + + GTLLID STIDP  +K  AA+A  +G   VDAPVSGG+GGA+  TLTFMVG E       +  +L HMGK VVHCGG G G  AKICNN+++ ++M+GVAE M LG  LG+D  +L G++N+SSGR W ++ YNP PG+ P  PS N+Y GGF + LM KDLG+A + A+     P P+G++A Q+Y ++   G+GGKDFSS+Y+F +
Sbjct:   27 RVGFIGLGNMGTHMAQNLI-KNGHSLVVHDVYPEAVARLEALGATAARSASEVAESCDRIITMLPSSPHVLQVYNCDSGLLKNVRPGTLLIDSSTIDPATTKEIAAKADAKGATFVDAPVSGGVGGAKDATLTFMVGCEEAKFAGIKTLLL-HMGKNVVHCGGVGMGEAAKICNNMLMAISMVGVAETMNLGTRLGLDSKVLAGIINTSSGRCWSSDTYNPVPGIKPGTPSCNNYDGGFVNNLMAKDLGLAQN-ASTATMSPTPMGSLAHQLYRILITKGYGGKDFSSIYQFFQ 317
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: XP_629544.1 (3-hydroxyisobutyrate dehydrogenase [Dictyostelium discoideum AX4] >Q54CX6.1 RecName: Full=Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial; Short=HIBADH; Flags: Precursor >EAL61086.1 3-hydroxyisobutyrate dehydrogenase [Dictyostelium discoideum AX4])

HSP 1 Score: 278.1 bits (710), Expect = 3.800e-71
Identity = 157/311 (50.48%), Postives = 204/311 (65.59%), Query Frame = 0 
Query:   36 LVITTSRHQSTSNSSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVV--GQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFL 345
            L+    R+ STS+S +   +GFIGLG MG   A NL+ K    ++++D +   M  L+ KGA++A+S  E+A+   +I+TMLPA+ HV+ V      +    + GTLL+D STIDP  ++  A+ A      M+D PVSGG GGAEAGTLTFMVGG  +    A+ + L+ MGK +VHCG  GTG VAK+CNNLVLG++MI V+EAM LGV  GMDP  L G+ N+SS R W +ELYNPCPGVI ++P+S  Y GGF S LM KDLG+A D A  + G PL LG  A Q+Y L+   G G KDFS VY FL
Sbjct:    9 LLFKNVRYMSTSSSKT---VGFIGLGNMGGHQAINLIKKGH-NLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTY-LECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMDPKKLAGIFNTSSARCWTSELYNPCPGVIETSPASRGYTGGFGSALMTKDLGLAVDSAKSI-GEPLLLGNSAHQLYTLLVAKGDGQKDFSVVYDFL 313
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: WP_047846747.1 (3-hydroxyisobutyrate dehydrogenase [Caballeronia mineralivorans] >KLU26102.1 3-hydroxyisobutyrate dehydrogenase [Caballeronia mineralivorans PML1(12)])

HSP 1 Score: 277.7 bits (709), Expect = 5.000e-71
Identity = 150/292 (51.37%), Postives = 200/292 (68.49%), Query Frame = 0 
Query:   53 IKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVV--GQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYK 343
            +++GFIGLG MG  MA+NLL K    + ++D + KA+      GAR A+S  E+AQT+++++TMLPA  HV+AV      ++   + G  LID STIDP  ++     AL +G    DAPVSGG GGA+AGTLTFMVG +A   E  +  +L  MGK +VHCG  GTG +AKICNNL+LG++MIGVAEAM+LG +LG+DP  L GV+N+S+GR W  + YNP P V+P+APSS  Y GGF + LM KDLG+A D A +V   P+ LGA+AQQ+Y  M + G GG DFS++ K
Sbjct:    1 MEIGFIGLGNMGGPMAANLL-KAGHSLTVFDLSEKALQAAVDAGARTAASPREVAQTSEVVITMLPAAAHVKAVYLNADGVLAGVRPGVPLIDSSTIDPATARLIGESALKQGNPFADAPVSGGTGGAQAGTLTFMVGADAALFETLKP-VLAGMGKNMVHCGETGTGQIAKICNNLLLGISMIGVAEAMKLGTSLGIDPNTLAGVINTSTGRCWSADTYNPYPNVLPNAPSSRGYTGGFGADLMLKDLGLAVDAARQV-KQPILLGALAQQLYQTMSMQGLGGLDFSAIIK 289
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: WP_005487985.1 (3-hydroxyisobutyrate dehydrogenase [Vibrio parahaemolyticus] >EFO45851.1 3-hydroxyisobutyrate dehydrogenase [Vibrio parahaemolyticus AQ4037])

HSP 1 Score: 277.3 bits (708), Expect = 6.500e-71
Identity = 147/294 (50.00%), Postives = 204/294 (69.39%), Query Frame = 0 
Query:   54 KMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAV-VGQ-VLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            K+ FIGLG MGS MA NLL K +L V ++D NP A+A L   GA  A SV++  Q   +++TMLPA+QHV++V +GQ  ++   K+GTLLID STIDP  +++   QA  RG+  VDAPVSGG+ GA AGTLTF+VGG  ++  +A+A +L+HMGK + H G  G G VAKICNN++LG+ M G  EA+ LG+  G+DP +L+ ++  SSGR+W  ELYNPCPGV+ + P+SN YQGGF S+LM KDLG+A + A        P+G++A+ ++      G G KDFSS+++F +
Sbjct:    3 KIAFIGLGNMGSPMAKNLL-KANLNVEVFDLNPNAVAELTALGASSADSVQQAVQGADVVVTMLPASQHVQSVYLGQDGILDSVKSGTLLIDSSTIDPETARSVGEQAEQRGISFVDAPVSGGVAGAAAGTLTFIVGGSQENFVQAKA-VLRHMGKNIFHAGDAGAGQVAKICNNMMLGILMSGTCEALNLGMENGLDPKVLSDIMLQSSGRNWALELYNPCPGVMENTPASNGYQGGFMSQLMAKDLGLAMEAA-VASQTSTPMGSLARNLFNFHNGQGNGQKDFSSLFEFYQ 293
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: WP_074296497.1 (3-hydroxyisobutyrate dehydrogenase [Paraburkholderia phenazinium] >SIO44564.1 3-hydroxyisobutyrate dehydrogenase [Paraburkholderia phenazinium])

HSP 1 Score: 277.3 bits (708), Expect = 6.500e-71
Identity = 157/300 (52.33%), Postives = 198/300 (66.00%), Query Frame = 0 
Query:   53 IKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVV---GQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLEGASI 350
            +K+GFIGLG MG+ MA NLL K    V ++D N +A+  L   GA+ A S +      + ++TMLPA  HV +V+     VL   AK G  +ID STIDP + KAFA  A   G   VDAPVSGG GGA AGTLTFMVGG A + E+ +  +L  MGK +VHCG  GTG VAKICNNLVLG+ M GVAEAM LG ALG+DP +L G++N+S+GR W ++ YNP PGVI +APSS  Y GGF + LM KDLG+A D A +V   P+ LGA+AQQ+Y  M + G G  DFS+V K  +   +
Sbjct:    1 MKIGFIGLGNMGAPMAQNLL-KAGHAVTVFDLNAQAVQALVAAGAKAAVSPKAAVTDVECVITMLPAAAHVRSVLTADDGVLAGIAK-GVTIIDSSTIDPASVKAFAELAAQHGNAFVDAPVSGGTGGAAAGTLTFMVGGSAAAYEQVKP-VLSGMGKNIVHCGDTGTGQVAKICNNLVLGITMAGVAEAMSLGAALGIDPKVLGGIINTSTGRCWSSDTYNPFPGVIETAPSSRGYTGGFGTDLMLKDLGLATDAAKQV-RQPVYLGALAQQLYQSMSIKGAGRLDFSAVIKLYQAGDV 296
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: WP_058762828.1 (3-hydroxyisobutyrate dehydrogenase [Pseudomonas psychrotolerans] >KTT11123.1 3-hydroxyisobutyrate dehydrogenase [Pseudomonas psychrotolerans])

HSP 1 Score: 276.9 bits (707), Expect = 8.500e-71
Identity = 155/289 (53.63%), Postives = 202/289 (69.90%), Query Frame = 0 
Query:   55 MGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQ-TTQIIMTMLPATQHVEAV-VGQ-VLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSV 341
            +GF+GLG MG+ MA NLL K    + +YD +  A+A LQ +GA +A++   +A    ++I+TMLPA  HV+ V +G+  LI HA+ GTLLID STIDP +++A A  A  RGLE++DAPVSGG GGA AGTLTFMVGG A   ++A+  +L  MG+ +VHCG  G G VAK+ NNL+LG++MIGVAEAM LG  LGMD   L GV+N+SSGR W +E+ NP P V+P AP+S  YQGGF + LM KDLG+A + A  V   P+ LGAVAQQ+Y      G GG DFS++
Sbjct:    3 LGFLGLGNMGAPMARNLL-KAGHRLTVYDVSAAALAALQAEGAEVAAAPAAVADGGAEVIITMLPAAAHVKTVYLGEDGLIAHARPGTLLIDSSTIDPLSARAVATAAAERGLELLDAPVSGGTGGAAAGTLTFMVGGSAAGFQRAQP-LLAAMGRNLVHCGASGNGQVAKVANNLLLGISMIGVAEAMALGTRLGMDAKTLAGVINTSSGRCWSSEVNNPYPDVLPQAPASRGYQGGFAADLMLKDLGLATEAARAV-RQPVILGAVAQQLYQRFSQTGGGGLDFSAI 288
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: WP_042762113.1 (3-hydroxyisobutyrate dehydrogenase [Vibrio parahaemolyticus] >KHF18329.1 3-hydroxyisobutyrate dehydrogenase [Vibrio parahaemolyticus] >OTW00192.1 3-hydroxyisobutyrate dehydrogenase [Vibrio parahaemolyticus] >OTW05321.1 3-hydroxyisobutyrate dehydrogenase [Vibrio parahaemolyticus])

HSP 1 Score: 276.6 bits (706), Expect = 1.100e-70
Identity = 147/294 (50.00%), Postives = 203/294 (69.05%), Query Frame = 0 
Query:   54 KMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAV-VGQ-VLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            K+ FIGLG MGS MA NLL K +L V ++D NP A+A L   GA  A SV++  Q   +++TMLPA+QHV++V +GQ  ++   K+GTLLID STIDP  +++   QA  RG+  VDAPVSGG+ GA AGTLTF+VGG  ++  +A+A +L HMGK + H G  G G VAKICNN++LG+ M G  EA+ LG+  G+DP +L+ ++  SSGR+W  ELYNPCPGV+ + P+SN YQGGF S+LM KDLG+A + A        P+G++A+ ++      G G KDFSS+++F +
Sbjct:    3 KIAFIGLGNMGSPMAKNLL-KANLNVEVFDLNPNAVAELTALGASSADSVQQAVQGADVVVTMLPASQHVQSVYLGQDGILDSVKSGTLLIDSSTIDPETARSVGEQAELRGISFVDAPVSGGVAGAAAGTLTFIVGGSQENFVQAKA-VLSHMGKNIFHAGDAGAGQVAKICNNMMLGILMSGTCEALNLGMENGLDPKVLSDIMLQSSGRNWALELYNPCPGVMENTPASNGYQGGFMSQLMAKDLGLAMEAA-VASQTSTPMGSLARNLFNFHNGQGNGQKDFSSLFEFYQ 293
The following BLAST results are available for this feature:
BLAST of NO05G04610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_058778732.17.700e-7254.333-hydroxyisobutyrate dehydrogenase [Pseudomonas ps... [more]
WP_058788725.17.700e-7254.333-hydroxyisobutyrate dehydrogenase [Pseudomonas ps... [more]
XP_014151878.12.200e-7150.653-hydroxyisobutyrate dehydrogenase [Sphaeroforma a... [more]
OQV18829.12.900e-7148.983-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
XP_629544.13.800e-7150.483-hydroxyisobutyrate dehydrogenase [Dictyostelium ... [more]
WP_047846747.15.000e-7151.373-hydroxyisobutyrate dehydrogenase [Caballeronia m... [more]
WP_005487985.16.500e-7150.003-hydroxyisobutyrate dehydrogenase [Vibrio parahae... [more]
WP_074296497.16.500e-7152.333-hydroxyisobutyrate dehydrogenase [Paraburkholder... [more]
WP_058762828.18.500e-7153.633-hydroxyisobutyrate dehydrogenase [Pseudomonas ps... [more]
WP_042762113.11.100e-7050.003-hydroxyisobutyrate dehydrogenase [Vibrio parahae... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04610.1NO05G04610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585179gene_3277Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g119gene2624Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04610.1NO05G04610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04610 ID=NO05G04610|Name=NO05G04610|organism=Nannochloropsis oceanica|type=gene|length=1819bp
AGTCTGTGTCTGTGTCTGTGTCTGGGAGCGTGGAAAATTGAGCATGTCAT
GCCTTGAAAGAACAGGAAACGAAGAGGCAAGGGAAGCGAAGGCCCCAAAA
AAATGCCGCCAGCGTCTGGGGCCTGGCAGAAATACCAAGCGACGTCCTCG
AGAAGCCTCTAGGCTGTTGTGGACTGTCCTCAAATAGGATCGAGAGGGTG
TCAAAGCCTTCTAGAGAGAAGGCAACGCACCGAACATCGCCAATCAGCGG
AGAGAGCCTCTTTTCTTCAAGCCCAACTCTGACACCCATACCCACGCCCC
ATACAGTACAGGAAATTCTGCGTGCACCACCAAAGGAAACGAGCAAGTAT
ATACTCAAGTGAAAGCTTGATCATGAATTGCTGGCCTTGTCCCGCAAGGC
GTCTCCTATATCGCGACATGACCTCCTCCTTTCTCTGCAGAACGCCGCCT
TTTTTGAGGGACCGCACTCCCGATCCCCTTGTCATTACCACTAGCCGCCA
TCAGAGCACCTCAAACTCTTCATCGCCGATTAAAATGGGTTTTATTGGTT
TGGGACAAATGGGGTCGCGCATGGCGAGCAATTTGCTTTCCAAGACTGAC
CTCCCAGTCGTCATCTATGACACCAACCCGAAGGCCATGGCTATTCTCCA
AGGAAAAGGCGCCCGCCTTGCCAGCTCCGTCGAGGAAATCGCGCAGACAA
CTCAAATTATCATGACTATGCTCCCGGCCACGCAGCACGTGGAAGCCGTG
GTGGGACAGGTACTCATCCCACACGCCAAGGCAGGGACACTCCTAATTGA
TGGTAGCACCATTGACCCCACGGCAAGCAAGGCCTTCGCCGCTCAAGCCC
TTACTCGAGGCCTCGAAATGGTTGATGCCCCCGTGAGTGGTGGTATAGGG
GGAGCAGAGGCCGGGACGCTGACTTTCATGGTGGGAGGAGAGGCGAAGAG
CGTCGAGAAAGCCGAGGCGTTTATATTGAAGCACATGGGCAAGAAGGTCG
TCCATTGCGGCGGGCCTGGCACGGGGGCCGTTGCCAAAATATGCAACAAC
TTAGTGCTGGGAGTGAATATGATTGGCGTCGCGGAAGCTATGCGTCTGGG
CGTGGCCTTGGGGATGGACCCCCTGATCTTAAACGGGgtgcgttactcaa
tccctctccctgaattcctcctcccctccctgccgtgtcctctgccagac
ccattacccacccatacataaattcaccccggccaactctcccttgttcc
ctccctctctcagGTCCTCAACTCCTCCAGCGGCCGCTCCTGGGTCACGG
AACTTTACAACCCCTGCCCGGGCGTTATTCCGTCCGCCCCTTCCTCAAAT
GACTACCAAGGGGGATTCACCTCTAGGTTAATGCAGAAAGATTTAGGAAT
TGCGGGGGATGTAGCAAACAAAGTGGGAGGGGTCCCCTTGCCCTTGGGAG
CGGTGGCGCAGCAGGTATATGCGCTGATGCAGGTCGCTGGGTGGGGCGGG
AAGGACTTTTCAAGCGTGTATAAGTTTCTGGAGGGGGCTTCAATTGAAGG
GAAAAGGAAGGGGTAGGTGGGAGTAGGGGAGAGAGGATATTAGTAGGTAG
CAGAGTAATGGAAGAAGAACAAAGAGTGGCTCTCGCGAATAAAGAGAGGG
AGGGAGTAGGAGAGCGGCAACGGTGGAGCTTCTGTGTAATAGTCAGACTA
CAGTTAAATACCAATCTGTGAGTGCAAAATGAACACATGTCAAGCCAGTA
GGGCAGCAGCAGGGAAACAAATGTGGACCCGTTCCTTTATGCCAGGGAAT
GACGATAGAAGAAAGCAGA
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protein sequence of NO05G04610.1

>NO05G04610.1-protein ID=NO05G04610.1-protein|Name=NO05G04610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=356bp
MNCWPCPARRLLYRDMTSSFLCRTPPFLRDRTPDPLVITTSRHQSTSNSS
SPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLA
SSVEEIAQTTQIIMTMLPATQHVEAVVGQVLIPHAKAGTLLIDGSTIDPT
ASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAF
ILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDP
LILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLG
IAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLEGASIE
GKRKG*
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Synonyms
Publications