NO05G04610, NO05G04610 (gene) Nannochloropsis oceanica

Overview
NameNO05G04610
Unique NameNO05G04610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1819
Alignment locationchr5:1202384..1204202 -

Link to JBrowse

Properties
Property NameValue
Description3-hydroxyisobutyrate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1202384..1204202 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004616phosphogluconate dehydrogenase (decarboxylating) activity
GO:0051287NAD binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR0089276-PGluconate_DH_C-like
IPR0061156PGDH_NADP-bd
IPR029154NADP-bd
Homology
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: EWM27995.1 (3-hydroxyisobutyrate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 458.8 bits (1179), Expect = 1.600e-125
Identity = 232/309 (75.08%), Postives = 268/309 (86.73%), Query Frame = 0 
Query:   42 RHQSTSNSS---SPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVVGQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLEGA 348
            RH ST+  +     + +GF+GLGQMGSRMASNLL KTDLPVVIYDTNPK+M+ L+ KGAR+A+S EE+A+   +IMTMLPATQHV+AV G ++IPHA+ GTLLIDGSTIDPTASKA AA+A T GL+MVDAPVSGG+GGAEAGTLTFMVGG+ + V+KAE  +L+HMGKKVVHCG  GTGA+AKICNNL+LG+NM+GVAEAMRLGVALGMDP ILNGV+N+SSGRSWVTE YNPCP V+PSAPSS+DYQGGF S+LMQKDLGIAGD A KV GVPLPLGA AQQ+Y LMQV   G KDFSSVY+FLEGA
Sbjct:   31 RHCSTTTETMDKGGVTLGFLGLGQMGSRMASNLLDKTDLPVVIYDTNPKSMSSLEAKGARVAASGEEVARQAHVIMTMLPATQHVQAVFGDIIIPHARKGTLLIDGSTIDPTASKALAARAKTMGLDMVDAPVSGGVGGAEAGTLTFMVGGDVQCVKKAEVSMLRHMGKKVVHCGPVGTGAIAKICNNLILGINMVGVAEAMRLGVALGMDPHILNGVVNASSGRSWVTETYNPCPTVVPSAPSSHDYQGGFASKLMQKDLGIAGDAA-KVVGVPLPLGAAAQQLYTLMQVNDLGNKDFSSVYRFLEGA 338
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: XP_005855723.1 (3-hydroxyisobutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU20645.1 3-hydroxyisobutyrate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 396.4 bits (1017), Expect = 9.600e-107
Identity = 199/259 (76.83%), Postives = 229/259 (88.42%), Query Frame = 0 
Query:   89 MAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVVGQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLEGA 348
            M+ L+ KGAR+A+S EE+A+   +IMTMLPATQHV+AV G ++IPHA+ GTLLIDGSTIDPTASKA AA+A T GL+MVDAPVSGG+GGAEAGTLTFMVGG+ + V+KAE  +L+HMGKKVVHCG  GTGA+AKICNNL+LG+NM+GVAEAMRLGVALGMDP ILNGV+N+SSGRSWVTE YNPCP V+PSAPSS+DYQGGF S+LMQKDLGIAGD A KV GVPLPLGA AQQ+YALMQV   G KDFSSVY+FLEGA
Sbjct:    1 MSSLEAKGARVAASGEEVARQAHVIMTMLPATQHVQAVFGDIIIPHARKGTLLIDGSTIDPTASKALAARAKTMGLDMVDAPVSGGVGGAEAGTLTFMVGGDVQCVKKAEVSMLRHMGKKVVHCGPVGTGAIAKICNNLILGINMVGVAEAMRLGVALGMDPHILNGVVNASSGRSWVTETYNPCPTVVPSAPSSHDYQGGFASKLMQKDLGIAGDAA-KVVGVPLPLGAAAQQLYALMQVNDLGNKDFSSVYRFLEGA 258
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: XP_004350505.1 (3-hydroxyisobutyrate dehydrogenase [Cavenderia fasciculata] >EGG13797.1 3-hydroxyisobutyrate dehydrogenase [Cavenderia fasciculata])

HSP 1 Score: 296.6 bits (758), Expect = 1.000e-76
Identity = 164/306 (53.59%), Postives = 210/306 (68.63%), Query Frame = 0 
Query:   42 RHQSTSNSSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAV-VGQV-LIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            R+ STS ++  + +GFIGLG MG   A NLL K    +V+YD +   +  L  KGA  A +  ++A+   II+TMLPA+ HV +V +G+  ++   K G LL+D STIDP  ++  A  AL  G  M+D PVSGG GGAEAGTLTFMVGG     E+A+ + L+ MGK +VHCG  GTG VAK+CNNLVLG++MI V+EAM LGV LGMDP  L+G+ N+SS R W +ELYNPCPGV+ SAP+S  Y GGF S LM KDLG+A D A  + G PLPLG  A Q+Y +M   G GGKDFS+VY+FL+
Sbjct:   17 RYMSTSTTNDKV-VGFIGLGNMGGHQAMNLLKKGH-KLVVYDISKDNVQKLTEKGATSAPTPADVAKQADIIVTMLPASAHVRSVYLGEKGILSTVKKGALLLDSSTIDPQTARDVANDALKAGAIMLDCPVSGGTGGAEAGTLTFMVGGAETDFERAKPY-LQAMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKLGMDPKKLSGIFNTSSARCWSSELYNPCPGVLESAPASRGYTGGFGSALMNKDLGLAVDSAKSI-GEPLPLGNNAHQIYTMMVTKGLGGKDFSAVYEFLQ 318
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: KYQ88873.1 (3-hydroxyisobutyrate dehydrogenase [Tieghemostelium lacteum])

HSP 1 Score: 294.7 bits (753), Expect = 3.900e-76
Identity = 164/300 (54.67%), Postives = 210/300 (70.00%), Query Frame = 0 
Query:   48 NSSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAV-VGQ-VLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            +++S   +GFIGLG MG+  ASNL+ K    V++YDT+ + M +L  KGA LAS+  EIA+ ++II+TMLPA+ HV+ V +GQ  ++   K GTLL+D STIDP  ++  A QA      ++D PVSGG GGAEAGTLTFMVGG+ K  E A+  IL  MGK +VHCG  GTG VAK+CNNLVLG++M+GV+EAM LGV LGMDP  L G+ N+SS R W +ELYNPCPGV+ ++P+S  Y GGF S LM KDLG+A D A  + G  L LG VA Q Y  M   G G KDFS+ Y+FL+
Sbjct:    2 STTSKKTIGFIGLGNMGAHQASNLI-KNGHKVIVYDTSSERMNLLLQKGAELASTPSEIAKRSEIIVTMLPASAHVKNVYLGQDGILSSVKPGTLLLDSSTIDPQTAREVADQAAKHQATLLDCPVSGGTGGAEAGTLTFMVGGKEKDFELAKP-ILSCMGKNIVHCGDVGTGQVAKVCNNLVLGISMVGVSEAMNLGVKLGMDPKKLAGIFNTSSARCWTSELYNPCPGVLENSPASRGYTGGFGSALMNKDLGLAVDSAKAI-GENLYLGNVAHQFYTQMVNKGLGQKDFSAAYEFLQ 298
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: EFX82586.1 (hypothetical protein DAPPUDRAFT_302347 [Daphnia pulex])

HSP 1 Score: 292.7 bits (748), Expect = 1.500e-75
Identity = 157/303 (51.82%), Postives = 216/303 (71.29%), Query Frame = 0 
Query:   45 STSNSSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHV-EAVVGQ-VLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            ST +  S  ++GFIGLG MG  MA NLL+K +  V ++D  P+AM+ LQ  GA +  +  E+A+ +  I+TMLP + HV EA  G+  +   AK G+LLID STIDP+ SK  AA A  +G+  +DAPVSGG+  A+AGTLTFMVGG  +    A A IL+H+GK +V+CG  G+G  AKICNN++L +NM+G AEAM LGV LG+DP +L+ ++N+SSGRSW +E+YNP PGV+P+ P+SN+Y+GGF + LM KDLG+A + A +     +PLG++A Q+Y LM V G+  KDFSSVY+FL+
Sbjct:   27 STVHHGSGKRVGFIGLGNMGGPMALNLLNKGN-SVTVFDVYPEAMSKLQDAGASVGHNPAEVAEKSDTIITMLPNSGHVQEAYAGENGVFQTAKPGSLLIDSSTIDPSVSKEMAALAEKKGMIFIDAPVSGGVMAAKAGTLTFMVGGPEEQFPNARA-ILEHVGKNIVYCGPVGSGQAAKICNNMLLAINMVGTAEAMNLGVRLGLDPKLLSSIINTSSGRSWSSEIYNPVPGVLPNVPASNNYEGGFGTALMTKDLGLAQNSATRSNSA-IPLGSLAHQLYRLMTVRGYAKKDFSSVYQFLQ 326
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: XP_003293971.1 (3-hydroxyisobutyrate dehydrogenase [Dictyostelium purpureum] >EGC29496.1 3-hydroxyisobutyrate dehydrogenase [Dictyostelium purpureum])

HSP 1 Score: 288.9 bits (738), Expect = 2.200e-74
Identity = 159/314 (50.64%), Postives = 210/314 (66.88%), Query Frame = 0 
Query:   37 VITTSRHQSTSNSSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVV--GQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLEGAS 349
            ++  +R+ ST+  +    +GFIGLG MG+  A+NL+ K    ++++D +   +  L+ KGA +ASS  E+A+   +I+TMLPA++HV+ V      ++   K GTLL+D STIDP  ++  +  A      M+D PVSGG GGAEAGTLTFMVGG      KA+ + L+ MGK +VHCGG GTG VAK+CNNLVLG++M+GV+EAM LGV LGMDP  L G+ N+SS R W +ELYNPCPGV+ ++P+S  Y GGF S LM KDLG+A D A  + G PLPLG  A QVY L+   G G KDFS VY FL   S
Sbjct:   10 LLNNARYMSTAKPT----VGFIGLGNMGAHQAANLIKKGH-NLMVFDLSKDNVNKLKEKGASVASSPAELAKNCDVIVTMLPASKHVKGVYCGENGILSTVKPGTLLLDSSTIDPETAREVSKIASEHKATMLDCPVSGGTGGAEAGTLTFMVGGSESDFNKAKPY-LECMGKNIVHCGGVGTGQVAKVCNNLVLGISMVGVSEAMNLGVKLGMDPKKLAGIFNTSSARCWSSELYNPCPGVLENSPASRGYTGGFGSALMNKDLGLAVDSAKSI-GEPLPLGNSAHQVYTLLVAKGEGNKDFSVVYDFLNKRS 316
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: XP_012747730.1 (hypothetical protein SAMD00019534_124790 [Acytostelium subglobosum LB1] >GAM29303.1 hypothetical protein SAMD00019534_124790 [Acytostelium subglobosum LB1])

HSP 1 Score: 286.6 bits (732), Expect = 1.100e-73
Identity = 155/304 (50.99%), Postives = 204/304 (67.11%), Query Frame = 0 
Query:   44 QSTSNSSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVV--GQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            +S S ++S   +GFIGLG MG   A+NL+ K    V++YD +   +  L+ KGA +ASS  E+A+   +I+TMLPA+ HV++V      +    K GTLL+D STIDP  ++  A  A      ++D PVSGG GGAEAGTLTFMVGG+    E+A+ + L+ MGK +VHCG  GTG  AK+CNNLVLG++M+GV+EAM LGV LG+DP  L G+ N+SS R W +ELYNPCPGV+ ++P+S  Y GGF S LM KDLG+A D A  + G PLPLG  A Q Y +M   G G KDFS  Y+FL+
Sbjct:   15 RSYSTAASERVVGFIGLGNMGGHQAANLIKKGH-KVIVYDISQDNVNRLKDKGALVASSPSELAKKADVIVTMLPASAHVKSVYCGDNGIFKSIKPGTLLLDSSTIDPQTAREVADIATKHNSTLLDCPVSGGTGGAEAGTLTFMVGGKEADFERAKPY-LQAMGKNIVHCGDVGTGQAAKVCNNLVLGISMVGVSEAMNLGVKLGIDPKKLAGIFNTSSARCWSSELYNPCPGVLENSPASRGYTGGFGSALMNKDLGLAVDSAKSL-GEPLPLGTTAHQFYTMMVQKGLGNKDFSVAYEFLQ 315
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: XP_012940528.1 (PREDICTED: 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like, partial [Aplysia californica])

HSP 1 Score: 283.1 bits (723), Expect = 1.200e-72
Identity = 156/299 (52.17%), Postives = 200/299 (66.89%), Query Frame = 0 
Query:   49 SSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVV--GQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            S SP+  GFIGLG MG  MA NL+ K   PVV +D +  ++A L+  GA +ASS  E+A     ++TMLPA  HV+ V      ++   + GTLL+D STIDP  SKA AAQA  +G   +DAPVSGG+  A  G LTFMVGG       A+A +L++MGK +VHCG  GTG  AKICNN++L ++MIG +E M LG+ LG+DP +L G+LN+S+GR W +ELYNP PGV+P  PSSNDYQGGF   LM KDLG+A   A  V   P PLG+ A Q+Y  +   G+GGKDFSS +KFL+
Sbjct:    4 SESPV--GFIGLGNMGGHMARNLMKK-GYPVVAFDVSQDSLATLKADGASVASSPAEVAFGVDRLVTMLPANAHVQEVYTGPSGILSTVREGTLLLDSSTIDPAVSKAVAAQAGEKGAVYMDAPVSGGVNAARDGILTFMVGGTESDFGTAKA-LLENMGKNIVHCGAVGTGQAAKICNNMLLAISMIGTSETMNLGMRLGLDPKLLAGILNTSTGRCWSSELYNPVPGVLPGVPSSNDYQGGFGVALMTKDLGLAQSAA-IVTQSPTPLGSAALQIYRQLCNHGYGGKDFSSTFKFLQ 297
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: XP_020428695.1 (3-hydroxyisobutyrate dehydrogenase [Heterostelium album PN500] >EFA76563.1 3-hydroxyisobutyrate dehydrogenase [Heterostelium album PN500])

HSP 1 Score: 281.2 bits (718), Expect = 4.500e-72
Identity = 152/300 (50.67%), Postives = 203/300 (67.67%), Query Frame = 0 
Query:   48 NSSSPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHVEAVV--GQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            +S++   +GFIGLG MG+  A+NL+ K    VV+YD +   +  L+ KGA +A+S  +IA+   +I+TMLPA+ HV++V      +    K GTLL+D STIDP  ++  A  A      M+D PVSGG GGAEAGTLTFMVGG+     +A+ + L+ MGK +VHCG  GTG  AK+CNNLVLG++M+GV+EAM LGV LG+DP  L G+ N+SS R W +E+YNPCPGV+ ++P+S  Y GGF S LM KDLG+A D A  + G PLPLG  A Q Y +M   G G KDFS+ Y+FL+
Sbjct:   24 SSANEKVVGFIGLGNMGAHQATNLIKKGH-KVVVYDISQDNVNKLREKGADVAASPSDIAKRADVIVTMLPASAHVKSVYCGDNGIFKSIKPGTLLLDSSTIDPQTARDVADIAAKHNATMLDCPVSGGTGGAEAGTLTFMVGGKDADFARAKPY-LEAMGKNIVHCGDIGTGQAAKVCNNLVLGISMVGVSEAMNLGVKLGIDPKKLAGIFNTSSARCWSSEVYNPCPGVLENSPASRGYTGGFGSALMNKDLGLAVDSAKSI-GEPLPLGTTAHQFYTMMVQKGLGQKDFSAAYEFLQ 320
[Close]
BLAST of NO05G04610 vs. NCBI_GenBank
Match: KZS17545.1 (3-hydroxyisobutyrate dehydrogenase [Daphnia magna])

HSP 1 Score: 281.2 bits (718), Expect = 4.500e-72
Identity = 147/293 (50.17%), Postives = 204/293 (69.62%), Query Frame = 0 
Query:   54 KMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLASSVEEIAQTTQIIMTMLPATQHV-EAVVGQVLIPHAKAGTLLIDGSTIDPTASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAFILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDPLILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLGIAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLE 346
            ++GFIGLG MG  MA NLL+K +  V +YD  P+AM+ LQ  GA +  S  E+A+ +  I+TMLP + HV EA  G+  + H           TIDP+ SK  A+ A  + +  +DAPVSGG+  A+AGTLTFMVGG  K  E A+A +L+H+GK +V+CG  G+G  AKICNN++L +NM+G AEAM LGV LG+DP +L+ ++N+SSGRSW +E+YNP PGV+P+ P+SN+Y+GGF + LM KDLG+A   A +     +PLG++A Q+Y LM V G+  KDFSS+Y+FL+
Sbjct:   36 RVGFIGLGNMGGPMALNLLNKGN-SVTVYDVYPEAMSKLQNAGAAIGHSPAEVAEKSDTIITMLPNSTHVQEAYAGENGVFH-----------TIDPSVSKEMASLAEKKAMTFIDAPVSGGVMAAKAGTLTFMVGGPEKEFENAKA-VLEHVGKNIVYCGSVGSGQAAKICNNMLLAINMVGTAEAMNLGVRLGLDPKLLSNIINTSSGRSWSSEIYNPVPGVLPNVPASNNYEGGFGTALMMKDLGLAQSSATRSNSA-IPLGSLAHQLYRLMSVRGYAKKDFSSIYQFLQ 314
The following BLAST results are available for this feature:
BLAST of NO05G04610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27995.11.600e-12575.083-hydroxyisobutyrate dehydrogenase [Nannochloropsi... [more]
XP_005855723.19.600e-10776.833-hydroxyisobutyrate dehydrogenase [Nannochloropsi... [more]
XP_004350505.11.000e-7653.593-hydroxyisobutyrate dehydrogenase [Cavenderia fas... [more]
KYQ88873.13.900e-7654.673-hydroxyisobutyrate dehydrogenase [Tieghemosteliu... [more]
EFX82586.11.500e-7551.82hypothetical protein DAPPUDRAFT_302347 [Daphnia pu... [more]
XP_003293971.12.200e-7450.643-hydroxyisobutyrate dehydrogenase [Dictyostelium ... [more]
XP_012747730.11.100e-7350.99hypothetical protein SAMD00019534_124790 [Acytoste... [more]
XP_012940528.11.200e-7252.17PREDICTED: 3-hydroxyisobutyrate dehydrogenase, mit... [more]
XP_020428695.14.500e-7250.673-hydroxyisobutyrate dehydrogenase [Heterostelium ... [more]
KZS17545.14.500e-7250.173-hydroxyisobutyrate dehydrogenase [Daphnia magna][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04610.1NO05G04610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585179gene_3277Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g119gene2624Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04610.1NO05G04610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04610 ID=NO05G04610|Name=NO05G04610|organism=Nannochloropsis oceanica|type=gene|length=1819bp
AGTCTGTGTCTGTGTCTGTGTCTGGGAGCGTGGAAAATTGAGCATGTCAT
GCCTTGAAAGAACAGGAAACGAAGAGGCAAGGGAAGCGAAGGCCCCAAAA
AAATGCCGCCAGCGTCTGGGGCCTGGCAGAAATACCAAGCGACGTCCTCG
AGAAGCCTCTAGGCTGTTGTGGACTGTCCTCAAATAGGATCGAGAGGGTG
TCAAAGCCTTCTAGAGAGAAGGCAACGCACCGAACATCGCCAATCAGCGG
AGAGAGCCTCTTTTCTTCAAGCCCAACTCTGACACCCATACCCACGCCCC
ATACAGTACAGGAAATTCTGCGTGCACCACCAAAGGAAACGAGCAAGTAT
ATACTCAAGTGAAAGCTTGATCATGAATTGCTGGCCTTGTCCCGCAAGGC
GTCTCCTATATCGCGACATGACCTCCTCCTTTCTCTGCAGAACGCCGCCT
TTTTTGAGGGACCGCACTCCCGATCCCCTTGTCATTACCACTAGCCGCCA
TCAGAGCACCTCAAACTCTTCATCGCCGATTAAAATGGGTTTTATTGGTT
TGGGACAAATGGGGTCGCGCATGGCGAGCAATTTGCTTTCCAAGACTGAC
CTCCCAGTCGTCATCTATGACACCAACCCGAAGGCCATGGCTATTCTCCA
AGGAAAAGGCGCCCGCCTTGCCAGCTCCGTCGAGGAAATCGCGCAGACAA
CTCAAATTATCATGACTATGCTCCCGGCCACGCAGCACGTGGAAGCCGTG
GTGGGACAGGTACTCATCCCACACGCCAAGGCAGGGACACTCCTAATTGA
TGGTAGCACCATTGACCCCACGGCAAGCAAGGCCTTCGCCGCTCAAGCCC
TTACTCGAGGCCTCGAAATGGTTGATGCCCCCGTGAGTGGTGGTATAGGG
GGAGCAGAGGCCGGGACGCTGACTTTCATGGTGGGAGGAGAGGCGAAGAG
CGTCGAGAAAGCCGAGGCGTTTATATTGAAGCACATGGGCAAGAAGGTCG
TCCATTGCGGCGGGCCTGGCACGGGGGCCGTTGCCAAAATATGCAACAAC
TTAGTGCTGGGAGTGAATATGATTGGCGTCGCGGAAGCTATGCGTCTGGG
CGTGGCCTTGGGGATGGACCCCCTGATCTTAAACGGGgtgcgttactcaa
tccctctccctgaattcctcctcccctccctgccgtgtcctctgccagac
ccattacccacccatacataaattcaccccggccaactctcccttgttcc
ctccctctctcagGTCCTCAACTCCTCCAGCGGCCGCTCCTGGGTCACGG
AACTTTACAACCCCTGCCCGGGCGTTATTCCGTCCGCCCCTTCCTCAAAT
GACTACCAAGGGGGATTCACCTCTAGGTTAATGCAGAAAGATTTAGGAAT
TGCGGGGGATGTAGCAAACAAAGTGGGAGGGGTCCCCTTGCCCTTGGGAG
CGGTGGCGCAGCAGGTATATGCGCTGATGCAGGTCGCTGGGTGGGGCGGG
AAGGACTTTTCAAGCGTGTATAAGTTTCTGGAGGGGGCTTCAATTGAAGG
GAAAAGGAAGGGGTAGGTGGGAGTAGGGGAGAGAGGATATTAGTAGGTAG
CAGAGTAATGGAAGAAGAACAAAGAGTGGCTCTCGCGAATAAAGAGAGGG
AGGGAGTAGGAGAGCGGCAACGGTGGAGCTTCTGTGTAATAGTCAGACTA
CAGTTAAATACCAATCTGTGAGTGCAAAATGAACACATGTCAAGCCAGTA
GGGCAGCAGCAGGGAAACAAATGTGGACCCGTTCCTTTATGCCAGGGAAT
GACGATAGAAGAAAGCAGA
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protein sequence of NO05G04610.1

>NO05G04610.1-protein ID=NO05G04610.1-protein|Name=NO05G04610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=356bp
MNCWPCPARRLLYRDMTSSFLCRTPPFLRDRTPDPLVITTSRHQSTSNSS
SPIKMGFIGLGQMGSRMASNLLSKTDLPVVIYDTNPKAMAILQGKGARLA
SSVEEIAQTTQIIMTMLPATQHVEAVVGQVLIPHAKAGTLLIDGSTIDPT
ASKAFAAQALTRGLEMVDAPVSGGIGGAEAGTLTFMVGGEAKSVEKAEAF
ILKHMGKKVVHCGGPGTGAVAKICNNLVLGVNMIGVAEAMRLGVALGMDP
LILNGVLNSSSGRSWVTELYNPCPGVIPSAPSSNDYQGGFTSRLMQKDLG
IAGDVANKVGGVPLPLGAVAQQVYALMQVAGWGGKDFSSVYKFLEGASIE
GKRKG*
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Synonyms
Publications