NO05G04550, NO05G04550 (gene) Nannochloropsis oceanica

Overview
NameNO05G04550
Unique NameNO05G04550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2543
Alignment locationchr5:1179923..1182465 -

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Properties
Property NameValue
DescriptionSphingosine-1-phosphate lyase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1179923..1182465 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0016831carboxy-lyase activity
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR002129PyrdxlP-dep_de-COase
Homology
BLAST of NO05G04550 vs. NCBI_GenBank
Match: XP_012943894.1 (PREDICTED: sphingosine-1-phosphate lyase-like [Aplysia californica])

HSP 1 Score: 428.7 bits (1101), Expect = 3.000e-116
Identity = 221/548 (40.33%), Postives = 338/548 (61.68%), Query Frame = 0
Query:   23 EHAVFFVVACRTLNIFRQKGFVGVYSATFKALRNLPGVEILIQSLVRREVEGAVRRLAKSESQITREAHRPMLRLPLEGISGEEILQQLEALKAAERRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVLLKAFRALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVGPDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTYRL 571
            EH V  +V    L I+R+ G   V      A++ +PGV  L+ S+++ E    +    K+    ++      + LP +G   +E+L +++ L+  E+ S     K+  Y +          + H Q+    F    ++ G   + +HD LV+    AFL E  N  NP + P +R+ E E+++MTAS+L+GD   VG LTSG  ESIL+ VK  R+ AR   P I +PE++ P+T HPA  KA H FG+ +  V VGPD R  ++A+E A++ NTIL+  SAPQ  HG++DP+  +++MA +  +  H+DA  GG+MLP++EKLGY VP WDFRC GV SI+ D+H+YGY +KG SV+LYR+ +LR  Q +T+  WPGG++GSPS+ GSRPG NIAAAWAS+  LGE G++A AK  M++T++LK+G+  + GL ++ +P +TC A+ S  P + I+ V D ME+KGW +ER Q P SLH S++PHH    D FL D+       +  G   L+ +G A IYG++ ++PD++++ +F+ + ++  Y+L
Sbjct:    8 EHLVLALVTFTLLGIYRRAGGWEVLRILVLAVKQMPGVGPLLSSVLKSEASNFI----KTTKLASKGGPPAAVVLPKKGKGKDELLSRMKELQ--EKESDHLEGKTFAYTY-------TVTDDHYQLQKDVFDLFTDKIG--YSPEHDTLVKYFQRAFLHE--NALNPMVYPSLRQMETEIVSMTASMLNGDSSCVGFLTSGGTESILMAVKASRNWARKQWPWINNPEIVCPITQHPAMGKAAHYFGLTIKYVPVGPDFRADVKAMEEALSPNTILIGCSAPQFCHGIVDPVREVSNMAAKHGLMCHVDACFGGYMLPWVEKLGYQVPEWDFRCPGVTSISADLHKYGYTVKGASVVLYRHDELRKQQIYTFGGWPGGLYGSPSMAGSRPGSNIAAAWASLQSLGEEGFMAKAKQLMEITDKLKDGVSKIDGLKILGQPHLTCFAVGSAHPDLDIMAVADLMEKKGWTIERNQQPDSLHCSILPHHQASADVFLEDIADCA--AQAMGNKQLSKQGTAGIYGMMATIPDKTIVDDFIREFFSEVYKL 536          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: ELU10802.1 (hypothetical protein CAPTEDRAFT_156221 [Capitella teleta])

HSP 1 Score: 423.3 bits (1087), Expect = 1.300e-114
Identity = 202/418 (48.33%), Postives = 285/418 (68.18%), Query Frame = 0
Query:  152 KAFRALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVGPDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTYR 570
            KA     E++G     DHD++V +   AF+ E  N  NPA+ P +R+ E E IAMTA++L+GD++VVGSLTSG  ESIL+ +KTYRD AR   P I +PEM+ P+T HPA  KA H FG  ++ V VG D +  ++A E A+T  TI L+ SAPQ   G++DPI  ++++A    +P+H+DA  GGFMLP++EKLGY +P++DFR  GV SI+ D+H+YGY  KG SV+LYRN D+R +Q F Y++WPGG+FGSPS+ G+RPGGNIAAAW ++  +G+ GY+ +AK  M+ T  LK+ I  + GL ++ +P MT  +I S DP++ IL + D MEE GW MERQQ P SLH S+MPHH  + D  + DL  + + V+  G   L  KG A +YG+V  +PD+SL+ +F+V  ++  Y+
Sbjct:    4 KAHDLFAEKTGAG--ADHDQVVRLFHHAFMHE--NALNPAIFPSLRRFETETIAMTAAMLNGDDQVVGSLTSGGTESILMAMKTYRDRARKLFPQIKNPEMVAPITIHPAHEKAAHYFGFTIVHVPVGKDFKPDIDAYEEAITPRTIALLCSAPQYCQGIVDPIEQISEIAVRRCLPMHVDACFGGFMLPWVEKLGYPMPKFDFRVPGVTSISADIHKYGYGAKGASVVLYRNEDIRRYQIFAYSQWPGGLFGSPSMAGTRPGGNIAAAWVALKAMGQDGYMKMAKQLMETTVLLKDAINAIPGLCILGKPQMTSFSIGSNDPEMNILALADVMEETGWKMERQQLPDSLHCSIMPHHTAIADQLIADLTNAAKRVK--GNKELAKKGTAAMYGMVGQIPDKSLIDDFIVNFFSEMYK 415          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: XP_002128697.1 (PREDICTED: sphingosine-1-phosphate lyase-like [Ciona intestinalis] >XP_018669295.1 PREDICTED: sphingosine-1-phosphate lyase-like [Ciona intestinalis])

HSP 1 Score: 422.5 bits (1085), Expect = 2.200e-114
Identity = 207/536 (38.62%), Postives = 332/536 (61.94%), Query Frame = 0
Query:   35 LNIFRQKGFVGVYSATFKALRNLPGVEILIQSLVRREVEGAVRRLAKSESQITREAHRPMLRLPLEGISGEEILQQLEALKAAERRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVLLKAFRALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVGPDK-RVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTYR 570
            ++I  ++G VG++ +   A+  LPG   ++++  ++E+EG +++    ++    + H  +L +P +G+  +++ ++L  LKA +   S+ G +   YV+              Q+  +AF+   + S      DH  +V+     F+ +  N  NP + P +RK ENEV++MTAS+L+GD  VVGS+TSG  ESIL+ +KTYRD+ARA  P IT+P ++ P T HPAF KA H F +++  V V       ++   E  + SNTILL+ASAP  P  ++DP+  +  +A + N+PLH+DA  GGFMLP++EKLG  +P WDFR   V SI+ D+H+YG+  KG SV+ YR++ +R HQFF Y+ W GG+F SP++ G+RPGG++AAAW ++  +G+ GY+ +A+  M+ TE++KEG+R + GL ++  P MT     + D  + I  + D MEEKGW ME Q+ P S+H S++P+H + CD ++ DLK SVE V++ G       G + IYG++  +P   ++ NF+V L++  Y+
Sbjct:   23 IDILLKRGVVGLFKSFANAILLLPGTNAIVKAFTKKEIEGFIQKSFTGDA----KPHGKLLSIPEKGVPIDQLQKELNELKAGDGNLSENG-RLFAYVY-------TTHGPRFQLQQEAFKMFSDFSLAKANNDHVSIVKAYLETFMHD--NALNPLVFPALRKFENEVVSMTASMLNGDSGVVGSVTSGGTESILMAMKTYRDMARAVRPSITEPNVVAPSTIHPAFEKAAHYFNIKIKHVPVSQTSFTPNIHQYEKEIDSNTILLLASAPSYPQAILDPVGEIGKLATKHNLPLHVDACFGGFMLPWVEKLGAKIPIWDFRVPAVTSISADLHKYGFATKGASVVCYRDSSIRKHQFFAYSSWSGGLFASPTMAGTRPGGHLAAAWVALRAMGQDGYIDMARKLMETTEKMKEGVRSIEGLKVLGSPLMTAFGFSTSDESLSIFGIVDVMEEKGWKMEAQRGPDSVHCSILPNHIKSCDEWVSDLKQSVEQVKKNGTN--PKNGTSAIYGMLSMVPSDGIVDNFLVDLFDEIYK 542          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: XP_009494115.1 (hypothetical protein H696_01938 [Fonticula alba] >KCV70992.1 hypothetical protein H696_01938 [Fonticula alba])

HSP 1 Score: 412.5 bits (1059), Expect = 2.200e-111
Identity = 226/554 (40.79%), Postives = 330/554 (59.57%), Query Frame = 0
Query:   18 GALFLEHAVFFVVACRTLNIFRQKGFVGVYSATFKALRNLPGVEILIQSLVRREVEGAVRRLAKSESQ-ITREAHRPMLRLPLEGISGEEILQQLEALKAAERRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVLLKAFR-ALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVGPDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTYR 570
            GA+   + V        L    Q G  G+ S    A   +PGV+ L++ ++R+ V   ++ L K+  +  T ++   +  +P +G+  E++L +L  +   E  S +   +   YV+ D ++         + L  AF  A E +   D +    + V + F  F    TN  NP+  P +R+ E E +AM ASL++GD +VVGS+TSG  ESILL +K YRD AR   PHI  P M+LP+TAHPAF KA H FGV  + V    D +    A+ +A+ SNTILLVASA Q  HGV DPI  +A +A+   +PLHIDA  GG MLP++EKLGY VP +DFR  GV SI+ D+H+YG+ +KG+SVLL+RN  LR +Q+F Y  WPGG+FGSPS+ G+RPGGNIA AWA++ ++G  GY+  A+  M+VT+ +  G+   G L ++ +P+MT  A  S DP + I  V DAME +GW MERQ  P SLH SVMP+H +    F+ D+  +V++V+ +  AA      A +YG+V ++P  +++  F+V   +  Y+
Sbjct:   39 GAIIARNVVAAGGLLHLLQSLYQDGLRGLTSQAIGAFFAIPGVQPLVRYIIRQNVGSTIKMLDKTSGEGGTADSGAQLYSIPEKGLPHEQVLAELADMLKTETESEE--GRLFAYVYTDNDSERN------EALRNAFHMACENQELRDES--LRKFVALVFNQF--AHTNALNPSAFPSLRRMETETVAMMASLMNGDSQVVGSMTSGGTESILLAIKAYRDRARDLSPHIKKPNMVLPITAHPAFEKAAHYFGVETVYVQFTDDFKADTAAMYSAINSNTILLVASAVQYCHGVCDPIAEIAAIAQSKGLPLHIDACFGGLMLPWVEKLGYPVPAFDFRVPGVTSISADLHKYGFALKGSSVLLFRNEQLRHYQYFAYPGWPGGLFGSPSIIGTRPGGNIATAWATLRVIGCDGYMETARRLMEVTQAMMAGVEATGHLRVLGKPEMTAFAFSSSDPSMNIFSVADAMERRGWKMERQSEPPSLHCSVMPNHIDSHQQFIADIAEAVKDVKEKRVAA--DGSTAAVYGMVMAVPSHAVINEFIVGFLSEMYK 578          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: XP_004987870.1 (sphingosine-1-phosphate lyase 1 [Salpingoeca rosetta] >EGD81000.1 sphingosine-1-phosphate lyase 1 [Salpingoeca rosetta])

HSP 1 Score: 410.6 bits (1054), Expect = 8.500e-111
Identity = 215/516 (41.67%), Postives = 308/516 (59.69%), Query Frame = 0
Query:   57 LPGVEILIQSLVRREVEGAVRRL----AKSESQITREAHRPMLRLPLEGISGEEILQQLEALKAAERRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVLLKAFRALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVGPDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTY 569
            +PG+  ++  ++ RE   AV +L       +    ++A    + LP +G+  EE+L+++  LK    + +   H  L  + Y     T   + H Q + KA    +++ G+      D  V  A+  F  E  N  NPA  P +R  E E  +M A +L+GDE VVG+LTSG  ESIL+ VKTYRD+AR   P ITDPE++ P+T HPAF KAG  F VR++TV V  + R  + A+  A+T NTI L  SAPQ PHG++DP+     +A    +PLH+DA  GGFMLP++EKLGY VP +DFR   V S++ D+H+YG+  KG S +L+RN  +R H  F Y++WPGG+F SPS+ G+RPGG IAA+WA++   G+ G++ +A+ TM  T +L   IR +  L +V EP+MT  A++S +P V I  V D ME K W +ERQQ P  LH S+MPHH    D  +  LK +V  V+      L+ +G A +YG+VE MPD+ L+ +F+  L N  Y
Sbjct:   46 IPGLNAILAFVIAREAHDAVGKLMPKSGDGDDGAEKKAISERVTLPEKGVPVEELLERMRELK---NKDADADHGRLFALVY-----TTEKDKHMQAVRKAQSMFKDKYGL-TDESMDAFVTQAYNIFSHE--NGLNPAAFPSLRLFETETCSMIADMLNGDENVVGNLTSGGTESILMAVKTYRDMARTLRPSITDPEIVCPITIHPAFQKAGAYFNVRIVTVPVDKNMRADVSAMAKAITHNTIALAVSAPQYPHGIVDPVEAAGALAEARGLPLHVDACFGGFMLPWVEKLGYKVPVFDFRVKAVTSMSADIHKYGWGAKGASCVLFRNKSIRKHMIFAYSKWPGGLFVSPSMAGTRPGGTIAASWAALKAQGKDGFMRIARDTMTTTTKLITAIRALDDLDIVGEPNMTAFAVISTNPSVDIQAVADVMESKNWKVERQQNPTCLHFSIMPHHANAADDLVQALKDAVTAVKNH---ELSAEGVAAMYGMVEKMPDKGLVTDFLKNLMNDIY 547          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: XP_019855201.1 (PREDICTED: sphingosine-1-phosphate lyase-like [Amphimedon queenslandica])

HSP 1 Score: 408.3 bits (1048), Expect = 4.200e-110
Identity = 229/540 (42.41%), Postives = 331/540 (61.30%), Query Frame = 0
Query:   35 LNIFRQKGFVGVYSATFKALRNLPGVEILIQSLVRREVEGAVRRLAKSESQITREAHRPMLRLPLEGISGEEILQQLEALKAAE-RRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVLLKAFRALE-ERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVG-PDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMP-HHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTYRL 571
            ++I    G  G+ S   +A+  LPG++ L+   +++EV G + +L  S+          +L +P +G++ E++L++L+  KAA+    S  G   +  VH          N   Q + KAF   +        T   + +  + F +FL E  N  NP + P +R  E EV+AMTA +L+G + VVG++TSG  ESIL+ VKTYRD ARA  P I  PEM+ P+T HPAF KA   F V+VI V +   D RV +   +  + SNTILL+ SAP+  HG+IDPIP L+ +A    +PLH+DA  GGFMLP++EKLGY++  +DFR  GV SI+ D+H+YG   KG SV+LYR++++R +Q F YT+WPGG+FGSPS++G+RPGGNIA++WA++M LG+ GYL++A+  M+VT  +KEGIR V  L L  E DMT  A  S    V +  V D ME KGW MER      +H +V+P H+NE+   F+ +LK SV  V+     +L  KG A +YG+   +P+R L+ +FVV+ +N  Y L
Sbjct:   23 ISILVTDGVSGLLSVLLRAILYLPGMKALVSLYLKKEVRGFLNKLGISKGS---GISSRILAIPEKGLANEKLLEELQRRKAADFNPDSGKGFAYVYTVH----------NQQFQTVQKAFDLFQFNAEDTSATDLKENISVVFFRSFLHE--NALNPMVFPSLRLFEVEVVAMTAWMLNGPKGVVGNITSGGTESILMAVKTYRDRARALNPSIKQPEMVAPVTVHPAFEKAAAYFDVKVIHVPISDSDYRVDINKYKKCINSNTILLIGSAPEYCHGIIDPIPELSKLALTYGLPLHVDACFGGFMLPWVEKLGYNIKPFDFRLGGVTSISADVHKYGLGPKGASVVLYRSSEIRKYQVFAYTDWPGGLFGSPSMSGTRPGGNIASSWAAIMSLGQEGYLSVAERLMNVTLSMKEGIRSVPELSLCGESDMTAFAFTS--SSVSVFAVADVMEGKGWKMER--GSTCIHCTVLPSHNNEIAKEFINNLKESVSIVKAN--PSLANKGSAGVYGMAGKIPERGLVKDFVVEFFNEIYTL 541          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: PIU68371.1 (aspartate aminotransferase family protein [Armatimonadetes bacterium CG07_land_8_20_14_0_80_40_9])

HSP 1 Score: 390.6 bits (1002), Expect = 9.100e-105
Identity = 207/474 (43.67%), Postives = 288/474 (60.76%), Query Frame = 0
Query:   95 LRLPLEGISGEEILQQLEALKAAERRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVLLKAFRALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVGPDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTY 569
            ++LP +GI  EE+L+ +E L+  + R  +    SL Y      AG                            +H   ++ A+  F SE  N  +P   P ++K E EV++MTA +L GD++VVGS+TSG  ESIL+ +KTYRD A+A    I  PEMILP+T HPAF KA H F V+ + + V    R  + AV      NTIL+V SAP  PHGVIDPI  +A +A E  +  H+DA LGGF+LPF+++LGY +P +DF   GV S++ D+H+YG+  KG S +LYRN +L+ HQFF YT+WPGG++ SP++TG+RPGG IAAAWA+M  +GE GYL  A+  M  T+ L  GI  + G+ ++ EPDM+  A  S +  V I  VGD ME +GW M+RQQ P SLHL + P H+   D FL DL+ SV+ +R   + A   +G A +YG++ S+PDR ++ NFV+Q     Y
Sbjct:    6 VKLPPKGIPKEELLKSMEQLRKDDARWKEGRTWSLVY-----HAGE---------------------------EHTEFLKSAYTLFFSE--NALSPIAFPSLQKLEAEVLSMTAHMLGGDDQVVGSMTSGGTESILMAIKTYRDWAKATRSEIKRPEMILPMTIHPAFEKAAHYFDVKPVHIPVTNSFRADINAVRDVTNKNTILMVGSAPSYPHGVIDPIAEMASLAAEHGIGFHVDACLGGFLLPFVKRLGYPIPDFDFSLPGVTSMSADIHKYGFAAKGASTVLYRNKELQKHQFFIYTDWPGGIYASPAMTGTRPGGAIAAAWAAMNAMGEEGYLRGAEQIMKTTKALMNGINALPGMYVLGEPDMSVFAFTSNE--VDIFAVGDEMEVRGWNMDRQQRPNSLHLMITPIHSGTVDQFLSDLRESVDYMRANPSTA--KEGTAPMYGMMASVPDRGMVRNFVLQFMEGLY 441          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: XP_004364537.2 (sphingosine-1-phosphate lyase 1 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 389.0 bits (998), Expect = 2.700e-104
Identity = 221/551 (40.11%), Postives = 318/551 (57.71%), Query Frame = 0
Query:   29 VVACRTLNIFRQKGFVGVYSATFKAL----RNLPGVEILIQSLVRREVEGAVRRLAKSESQITREAHRPMLRLPLEGISGEEILQQLEALKAAERRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVLLKAFRALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVG---PDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTYRLSR 573
            +VA   + +      VG+  +  K L    R +PG    + + + +EV+ A + L K        AHR    LP  G+S E +L +L  LK A+  S     KS  YV+  P+                                D  +  A   F+ E  N  NP   P +RK EN+++ ++A+LL GD    G++TSG  ESIL+ VK +RD A   L ++T+P M++P+TAHPAF KAGH FGV++    V     D RVS+ A+   +  NTI+L+ SAPQ PHGVID IP L  +A   N+PLH+DA +GGF+LPF+ K   D+PR+DF   GV S++ D+H+YG+  KG+SV+LY + + R +QFFTY+EWPGG+F SPS+ GSR GG IAAAWA ++ LGESGY+  A+  MD  ++L  G+R + GL ++ +PD   ++ +S DP V IL V D MEE GW +ERQ+ P+S+HLSVMP H ++ D F+ +L  +V  VR      L   G A +YG++  +PD  L+ +F+V+     Y  +R
Sbjct:   29 IVAAVVVKVAHHVYSVGLKKSIGKLLVGLVRAVPGGSSTLDATLEQEVDSAAKLLTK--------AHR-FDSLPTTGLSREVVLSKLADLKRADIDSH--AGKSWAYVYSQPD-----------------------------NTFDDFLADASNLFMHE--NALNPMAFPALRKMENDIVRISATLLGGDARACGTMTSGGTESILMAVKAHRDRA-LKLRNVTEPNMVIPITAHPAFEKAGHYFGVQIRHAPVTNELEDPRVSVPAMAKLIDRNTIMLLGSAPQYPHGVIDDIPALGALALARNIPLHVDACVGGFILPFIRKFRPDLPRFDFSVPGVASMSADLHKYGFSSKGSSVVLYSSEEYRQYQFFTYSEWPGGLFISPSMCGSRGGGPIAAAWACLLSLGESGYVQSARLIMDTADKLSNGVRAIPGLRVIGKPDACLVSFLSTDPTVDILAVADVMEETGWRIERQRKPSSIHLSVMPQHAKIADKFISELAQAVNKVRAN--QQLAKAGSAAMYGMIAQIPDEKLIESFLVKFMARLYTPTR 534          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: KJE90345.1 (sphingosine-1-phosphate lyase 1 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 388.7 bits (997), Expect = 3.500e-104
Identity = 220/553 (39.78%), Postives = 320/553 (57.87%), Query Frame = 0
Query:   29 VVACRTLNIFRQKGFVGVYSATFKAL----RNLPGVEILIQSLVRREVEGAVRRLAK--SESQITREAHRPMLRLPLEGISGEEILQQLEALKAAERRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVLLKAFRALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVG---PDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNSTYRLSR 573
            +VA   + +      VG+  +  K L    R +PG    + + + +EV+ A + L K    +    ++HR    LP  G+S E +L +L  LK A+  S     KS  YV+  P+                                D  +  A   F+ E  N  NP   P +RK EN+++ ++A+LL GD    G++TSG  ESIL+ VK +RD A   L ++T+P M++P+TAHPAF KAGH FGV++    V     D RVS+ A+   +  NTI+L+ SAPQ PHGVID IP L  +A   N+PLH+DA +GGF+LPF+ K   D+PR+DF   GV S++ D+H+YG+  KG+SV+LY + + R +QFFTY+EWPGG+F SPS+ GSR GG IAAAWA ++ LGESGY+  A+  MD  ++L  G+R + GL ++ +PD   ++ +S DP V IL V D MEE GW +ERQ+ P+S+HLSVMP H ++ D F+ +L  +V  VR      L   G A +YG++  +PD  L+ +F+V+     Y  +R
Sbjct:   29 IVAAVVVKVAHHVYSVGLKKSIGKLLVGLVRAVPGGSSTLDATLEQEVDSAAKLLTKDVQPNHPKMQSHR-FDSLPTTGLSREVVLSKLADLKRADIDSH--AGKSWAYVYSQPD-----------------------------NTFDDFLADASNLFMHE--NALNPMAFPALRKMENDIVRISATLLGGDARACGTMTSGGTESILMAVKAHRDRA-LKLRNVTEPNMVIPITAHPAFEKAGHYFGVQIRHAPVTNELEDPRVSVPAMAKLIDRNTIMLLGSAPQYPHGVIDDIPALGALALARNIPLHVDACVGGFILPFIRKFRPDLPRFDFSVPGVASMSADLHKYGFSSKGSSVVLYSSEEYRQYQFFTYSEWPGGLFISPSMCGSRGGGPIAAAWACLLSLGESGYVQSARLIMDTADKLSNGVRAIPGLRVIGKPDACLVSFLSTDPTVDILAVADVMEETGWRIERQRKPSSIHLSVMPQHAKIADKFISELAQAVNKVRAN--QQLAKAGSAAMYGMIAQIPDEKLIESFLVKFMARLYTPTR 544          
BLAST of NO05G04550 vs. NCBI_GenBank
Match: OJY15234.1 (aspartate aminotransferase family protein [Myxococcales bacterium 68-20])

HSP 1 Score: 380.9 bits (977), Expect = 7.200e-102
Identity = 191/395 (48.35%), Postives = 264/395 (66.84%), Query Frame = 0
Query:  176 AFAAFLSESTNPSNPALVPVIRKCENEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDPEMILPLTAHPAFIKAGHLFGVRVITVAVGPDKRVSLEAVEAAVTSNTILLVASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDVPRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPGGVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGIRGVGGLGLVAEPDMTCLAIVSR----DPKVCILLVGDAMEEKGWWMERQQAPASLHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESMPDRSLLANFVVQLYNS 567
            AF +F SE  N  NP   P +R+ E EVIAMT SLL+  E   GS+TSG +ES+LL +KT RD ARA  P++T PE++LP+TAHPA  KA HL  +RV+ V   P       A  + VT +TIL+V SAPQ PHG++DPI  LA +A+E  +  H+DA  GGFMLP++EKLG+ VP +DFR  GV SI+ D+H+YGY  KG S +LYR   LR HQF+ + +WPGG+F SPS+ G+RPGG IAAAWA +  LGE GYL LAK  M+ T+ +  G+R + GL ++ EP M+ +AI +R    +  + I ++GD M+ +GW+ +R QAP SLHL+V P H  +   FL DL   VE  R   A+    +GKA +YG++ S+PDR+++ + +++L +S
Sbjct:   50 AFTSFFSE--NALNPMAFPSLRRMETEVIAMTLSLLNAPEGAAGSMTSGGSESLLLALKTARDWARAERPNVTRPEVLLPVTAHPALFKAAHLLDLRVVVVPTTPGLGADAAAARSLVTDDTILIVGSAPQYPHGIVDPIEELAAIAKERGILCHVDACFGGFMLPWVEKLGHPVPPFDFRVPGVTSISADLHKYGYAAKGASTVLYRTRALRRHQFYVHADWPGGLFVSPSVLGTRPGGAIAAAWAVLNYLGEEGYLDLAKRAMNATQTIASGVRAIPGLEILGEPVMSAIAIGTRASGDERPLDIYVIGDLMQARGWFFDRGQAPPSLHLTVSPAHEAIASEFLADLHACVEETR---ASKEQPQGKAALYGMLGSLPDRAIVRDALLELMDS 439          
The following BLAST results are available for this feature:
BLAST of NO05G04550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_012943894.13.000e-11640.33PREDICTED: sphingosine-1-phosphate lyase-like [Apl... [more]
ELU10802.11.300e-11448.33hypothetical protein CAPTEDRAFT_156221 [Capitella ... [more]
XP_002128697.12.200e-11438.62PREDICTED: sphingosine-1-phosphate lyase-like [Cio... [more]
XP_009494115.12.200e-11140.79hypothetical protein H696_01938 [Fonticula alba] >... [more]
XP_004987870.18.500e-11141.67sphingosine-1-phosphate lyase 1 [Salpingoeca roset... [more]
XP_019855201.14.200e-11042.41PREDICTED: sphingosine-1-phosphate lyase-like [Amp... [more]
PIU68371.19.100e-10543.67aspartate aminotransferase family protein [Armatim... [more]
XP_004364537.22.700e-10440.11sphingosine-1-phosphate lyase 1 [Capsaspora owczar... [more]
KJE90345.13.500e-10439.78sphingosine-1-phosphate lyase 1 [Capsaspora owczar... [more]
OJY15234.17.200e-10248.35aspartate aminotransferase family protein [Myxococ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003401NSK003401Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04550.1NO05G04550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553892gene_3271Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g112gene2617Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04550.1NO05G04550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04550 ID=NO05G04550|Name=NO05G04550|organism=Nannochloropsis oceanica|type=gene|length=2543bp
GCTTGTTCTACGAGATCAAAATGACACTTCCAACTCACAGCACACAATGA
AGATATATATCTCGCTACTGGATCCTGATGTATGCGAATCACCTCAATTG
CCTGCTTTCCCAAGTCTCCGGTCTCATCTCTAGCTCCTTATTGACACACT
TTCTCACTACCCCGGCCTTCCCCCACGCGATCCATGGCGACAGCGCGAAA
GACCCCCTTCGTGACGTGCCCGTGCCCCTGGCCTGCCGCACGCGCGCCCT
TCTTCTCCCTTTTCGACTCCTCGTCCGTGTGCAGGCCTCCGTCTTTATCT
CCCCCCTACCTCCTTCTTCTTCACCTCCACCATGGCCCGAGGCAGCAGCG
GCAGTGGCAGAAGCTTGGAGCTCGCCTTGCGCGGGGCGTTGTTCCTGGAG
CACGCCGTCTTTTTCGTCGTCGCCTGCCGGACACTCAACATATTTCGGCA
AAAGGGCTTTGTGGGTGTGTACAGCGCAACATTTAAGGCCTTGCGAAACC
TGCCGGGGGTGGAAATTCTTATCCAGAGCTTGGTCCGACGAGAGGTGGAA
GGAGCCGTGCGGCGGCTAGCTAAAAGTGAGTCGCAAATCACCCGCGAAGC
CCATCGCCCCATGCTTCGTTTGCCTTTGGAAGGAATTTCGGGAGAGGAAA
TATTGCAACAGTTGGAGGCGTTGAAAGCGGCCGAGAGGAGGAGTTCCAAG
ACAGGACACAAATCGTTGGGGTACGTGCACTATGATCCTGAAGCAGGAAC
ACAACGGCTGAACGCGCATTGCCAGGTATTGCTCAAGGCCTTTCGCGCGT
TAGAAGAGCGAAGTGGCGTGGATGTGACGGGAGACCATGATAGATTGGTG
GAGATGGCGTTTGCGGCTTTTCTGAGTGAGTCGACGAATCCGAGTAATCC
CGCTTTGGTGCCCGTCATTCGCAAGgtagggaggttggcttgtgtcacgt
aaattaggagaaagaacgagacgagagcggaggagggaagaagaaattta
tctgcatgaatatgagaaaggatgagggggagggtttaggggatgaggcc
cgtggcgctttccgacctgatgtgacaacaatcattgacaccacccttcc
catcctcccttcctccctccctttcttaaccacagTGTGAAAACGAGGTC
ATTGCCATGACCGCCTCCCTCCTCCACGGCGATGAAGAGGTCGTTGGTTC
TCTCACCAGTGGCACTGCGGAAAGCATTCTTCTCACGGTCAAGACGTATC
GCGACTTGGCTAGAGCAGCCCTTCCCCATATCACCGATCCCGAGATGATC
CTCCCCCTCACAGCCCACCCCGCCTTCATCAAGGCCGGGCATTTATTTGG
GGTCCGTGTCATAACGGTGGCGGTTGGTCCGGATAAACGGGTGTCGTTGG
AGGCGGTTGAGGCTGCGGTAACGAGCAATACAATCTTGTTGGTGGCGTCA
GCACCACAGGCCCCCCACGGGGTGATTGACCCTATCCCTTGCTTGGCGGA
CATGGCCAGAGAATTGAACGTGCCTTTGCATATAGACGCGCATTTGGGAG
GCTTTATGTTGCCATTCTTGGAGAAACTGGGATATGACGTGCCAAGATGG
GATTTTCGGTGTGCGGGCGTGATGAGTATCAATGTGGATATGCATCGATA
TGGCTgtacgtaccgaatgaaggagggggggataggggatggggggtaag
gaggcttgtcggggtgttgactgtagtcgttcctctatttttctcctgtt
tctcatccctgagtcctcccttcctcccttcctcccttcctccctttcct
tcttcccctcagACTGCATCAAAGGCACCTCCGTCCTCCTCTACCGTAAC
ACGGACCTCCGTGCCCACCAGTTTTTTACCTACACCGAGTGGCCTGGTGG
GGTCTTTGGATCTCCTTCCTTGACGGGGTCAAGGCCGGGAGGGAACATCG
CCGCCGCGTGGGCGAGCATGATGCTTTTGGGGGAGAGTGGGTACCTCGCT
CTGGCCAAGACGACGATGGATGTGACTGAACGGTTGAAGGAGGGCATCAG
GGGGGTGGGGGGGTTGGGGCTTGTGGCAGAGCCGGATATGACGTGTCTGG
CGATTGTGAGCAGGGATCCGAAGGTATGTATTTTACTCGTGGGCGATGCG
ATGGAGGAGAAGGGATGGTGGATGGAGAGGCAACAAGCACCTGCCTCTCT
GCACTTGTCGGTGATGCCTCACCATAACGAGGTTTGTGACAGTTTCTTGC
TTGATCTCAAAACATCGGTGGAGAACGTGAGGAGGCAGGGAGCGGCGGCG
CTCACGACAAAGGGGAAAGCGGATATATATGGGTTGGTGGAGTCGATGCC
CGACCGGAGTTTGTTGGCAAACTTTGTGGTACAGCTTTATAATAGCACGT
ACCGGTTAAGTAGGGAGGATGGGGAGAACATTGTGAGCATGGTCTCGCCT
TCGTTTGAGAGGGGAGGCTTGGAAGCTTTGGGGGAGGAGGACGACGAGGA
GGACGACGAGGAGGACGTCGAGGAGGAAGGACGAGAAAGGTGA
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protein sequence of NO05G04550.1

>NO05G04550.1-protein ID=NO05G04550.1-protein|Name=NO05G04550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=615bp
MARGSSGSGRSLELALRGALFLEHAVFFVVACRTLNIFRQKGFVGVYSAT
FKALRNLPGVEILIQSLVRREVEGAVRRLAKSESQITREAHRPMLRLPLE
GISGEEILQQLEALKAAERRSSKTGHKSLGYVHYDPEAGTQRLNAHCQVL
LKAFRALEERSGVDVTGDHDRLVEMAFAAFLSESTNPSNPALVPVIRKCE
NEVIAMTASLLHGDEEVVGSLTSGTAESILLTVKTYRDLARAALPHITDP
EMILPLTAHPAFIKAGHLFGVRVITVAVGPDKRVSLEAVEAAVTSNTILL
VASAPQAPHGVIDPIPCLADMARELNVPLHIDAHLGGFMLPFLEKLGYDV
PRWDFRCAGVMSINVDMHRYGYCIKGTSVLLYRNTDLRAHQFFTYTEWPG
GVFGSPSLTGSRPGGNIAAAWASMMLLGESGYLALAKTTMDVTERLKEGI
RGVGGLGLVAEPDMTCLAIVSRDPKVCILLVGDAMEEKGWWMERQQAPAS
LHLSVMPHHNEVCDSFLLDLKTSVENVRRQGAAALTTKGKADIYGLVESM
PDRSLLANFVVQLYNSTYRLSREDGENIVSMVSPSFERGGLEALGEEDDE
EDDEEDVEEEGRER*
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Synonyms
Publications