NO05G04450, NO05G04450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04450 vs. NCBI_GenBank
Match: EWM27933.1 (hypothetical protein Naga_100008g101 [Nannochloropsis gaditana]) HSP 1 Score: 230.3 bits (586), Expect = 4.700e-57 Identity = 113/180 (62.78%), Postives = 141/180 (78.33%), Query Frame = 0 Query: 1 MLLAATTKSAMQRQIWPLMR-SPLMRPVVAPCRGFAKGSPTHVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVTCSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRMLLGGIKEGITTVV 180 M+LA +A+++ + L R SP+ ++ P RG AKGSPT V E REA++ + +Q SGRHTLYSDLMPEAGG +KGP PKEY L AL SCTL+T+R+YSD MIK GKWPGK+IEK+SV+CSEHGDD HVP I+V + L+SNLDE+QIKRL+AAA KCPVKRM+ GG+K GITTV+ Sbjct: 1 MILA---NAALRQSSFALSRSSPVRSRLIIPFRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVL 177
BLAST of NO05G04450 vs. NCBI_GenBank
Match: GAQ83154.1 (hypothetical protein KFL_001370240 [Klebsormidium nitens]) HSP 1 Score: 93.6 bits (231), Expect = 6.900e-16 Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0 Query: 32 RGFAKGSPTHVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVTCSEH-GDDHHVPTRIEVRVSLKS-NLDEDQIKRLMAAAGKCPVKRMLLGGIKEGITTVV 180 R + GSP HV + E + H SGRH L DL PE+GG ++GP PKE +++ LG CT +T+R+Y+D KWP +E+++V E HVP + V V L L Q RL +CPVKRM+ G + +GI++V+ Sbjct: 5 RCMSAGSPEHVTVEEDPDDVRYHHTI-RSGRHVLKGDLAPESGGTDEGPSPKELLMSGLGLCTSMTIRMYAD----RKKWP---LERVNVEVREFTKPGAHVPEELLVTVHLTGPQLTYAQRARLHEIGDRCPVKRMIKGEMPKGISSVL 146
BLAST of NO05G04450 vs. NCBI_GenBank
Match: WP_092515997.1 (OsmC family protein [Afipia sp. GAS231] >SDP14526.1 putative redox protein [Afipia sp. GAS231]) HSP 1 Score: 88.2 bits (217), Expect = 2.900e-14 Identity = 62/181 (34.25%), Postives = 91/181 (50.28%), Query Frame = 0 Query: 2 LLAATTKSAMQRQIWPLMRSPLMRPVVAPCRGFAKGSPTHVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVT----------CSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRMLLGGIK 173 LL+A SA + + PV AP A+G P +VV+ E R V TSG H + +D AGG + GPGP + +L+ALG+CT +TMR+Y+D +E+++VT C+E + +I+ +S++ LD DQ KRLM A KCPV R L ++ Sbjct: 229 LLSAKRDSAYVADVIAAWAERYVEPVAAPVAVAAEG-PRNVVVRETRAGKFQQTV--TSGPHQMLADEPVAAGGEDSGPGPYDLLLSALGACTSMTMRMYADR-------KSLPVERITVTLKHNKIHAEDCAECETKEGLIDQIDRVISVEGALDADQRKRLMEIADKCPVHRTLTSEVR 399
BLAST of NO05G04450 vs. NCBI_GenBank
Match: WP_057854094.1 (OsmC family protein [Bradyrhizobium valentinum] >KRQ92808.1 osmotically inducible protein C [Bradyrhizobium valentinum] >KRQ98805.1 osmotically inducible protein C [Bradyrhizobium valentinum]) HSP 1 Score: 86.3 bits (212), Expect = 1.100e-13 Identity = 59/174 (33.91%), Postives = 84/174 (48.28%), Query Frame = 0 Query: 2 LLAATTKSAMQRQIWPLMRSPLMRPVVAPCRGFAKGSPTHVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSV---TCSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRMLLGGIK 173 LL+ SA + + PV A A +P HVV+ E R + V TSG H + +D GG + GPGP ++VL LG+CT +TMR+Y++ + T+E + C E + RI+ +S++ LD DQ KRLM A KCPV R L I+ Sbjct: 229 LLSGKRDSAYVAGVIAAWAERYIEPVAAQPAAAAIEAPRHVVVRETRNSKFQQTV--TSGPHEMVADEPVGVGGQDSGPGPYDFVLAGLGACTSMTMRMYAERKSLPVERITVTLEHSKIYAKDCEECETREGMLDRIDRVISIEGVLDADQRKRLMEIADKCPVHRTLTSEIR 400
BLAST of NO05G04450 vs. NCBI_GenBank
Match: WP_065756546.1 (OsmC family protein [Bradyrhizobium paxllaeri] >OCK56203.1 osmotically inducible protein C [Bradyrhizobium paxllaeri]) HSP 1 Score: 84.0 bits (206), Expect = 5.400e-13 Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 0 Query: 24 MRPVVAPCRGFAKGSPTHVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVT----------CSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRMLLGGIK 173 + P+ A A +P HVV+ E R + V T+G H + +D GG + GPGP +++LT LG+CT +TMR+Y+D +E+++VT C E + +I+ +S++ LD DQ RLM A KCPV R L I+ Sbjct: 251 IEPIAAQPAAAASEAPRHVVVRETRNSKLQQIV--TTGPHEMLADEPVALGGQDSGPGPYDFLLTGLGACTSMTMRMYADR-------KSLPLERVTVTLKHSKIHARDCEECETREGMLDQIDRVISIEGALDADQRARLMEIADKCPVHRTLTSEIR 400
BLAST of NO05G04450 vs. NCBI_GenBank
Match: WP_006576636.1 (OsmC family peroxiredoxin [Cupriavidus sp. HPC(L)] >ESJ26783.1 osmotically inducible protein C [Cupriavidus sp. HPC(L)]) HSP 1 Score: 83.6 bits (205), Expect = 7.100e-13 Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 0 Query: 40 THVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVTCSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRMLLGGIKEGIT 177 T V +R A + + T+G+H L SD AGG + GP P +YVLT LG+CT IT+R+Y+D ++G G ++++ + GD TRIE + ++L ++Q +RL+ AGK PV R L G+ T Sbjct: 2 TPVSHASVRAAGPNYRHEITTGKHQLVSDEPARAGGQDAGPAPYDYVLTGLGACTAITLRMYAD---RKGWDLGDLCVELTLLKNRDGD-----TRIERTLHTSASLSDEQWERLLEIAGKTPVTRTLQAGVSIATT 130
BLAST of NO05G04450 vs. NCBI_GenBank
Match: WP_074831846.1 (MULTISPECIES: OsmC family protein [Bradyrhizobium] >SDH87547.1 putative redox protein [Bradyrhizobium ottawaense] >SED99329.1 putative redox protein [Bradyrhizobium lablabi]) HSP 1 Score: 83.2 bits (204), Expect = 9.300e-13 Identity = 52/155 (33.55%), Postives = 82/155 (52.90%), Query Frame = 0 Query: 28 VAPCRGFAKGSPTHVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVT----------CSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRMLLGGIK 173 +AP +G P +VV+ E R + V TSG H + +D AGG + GPGP +++L+ LG+CT +TMR+Y+D +E+++VT C+E + +I+ ++++ LD DQ KRLM A KCPV R L ++ Sbjct: 256 IAPVAATTEG-PRNVVVRETRNSKFQQTV--TSGPHQMLADEPVAAGGADTGPGPYDFLLSGLGACTSMTMRMYADR-------KSLPVERITVTLKHNKIHAEDCAECETREGMLDQIDRVIAIEGALDADQRKRLMEIADKCPVHRTLTSEVR 400
BLAST of NO05G04450 vs. NCBI_GenBank
Match: OJU32278.1 (osmotically inducible protein C [Alphaproteobacteria bacterium 65-37]) HSP 1 Score: 83.2 bits (204), Expect = 9.300e-13 Identity = 55/143 (38.46%), Postives = 77/143 (53.85%), Query Frame = 0 Query: 35 AKGSPTHVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVT----------CSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRML 168 A P VV+ E +A L A SG H L +D GG + GPGP +Y+L ALGSCT +T+R+Y+ L KWP ++K++VT C+E RIE ++L+ LD++Q KRL+ A +CPV R L Sbjct: 5 AAAPPPGVVIVEDSDAGPL-AETIRSGAHVLRADEPVAVGGNDTGPGPYDYLLAALGSCTAMTLRMYARLK----KWP---LQKVTVTLKHDKIHATDCAECETKEGKVDRIERVIALEGPLDDEQRKRLLEIADRCPVHRTL 139
BLAST of NO05G04450 vs. NCBI_GenBank
Match: WP_064576279.1 (OsmC family peroxiredoxin [Cupriavidus gilardii]) HSP 1 Score: 82.8 bits (203), Expect = 1.200e-12 Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 0 Query: 40 THVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVTCSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRMLLGGIKEGIT 177 T V +R A + + T+G+H L SD AGG + GP P +YVLT LG+CT IT+R+Y+D ++G G ++++ + GD TRIE + ++L ++Q +RL+ AGK PV R L G+ T Sbjct: 2 TPVSHASVRAAGPNYRHEITTGKHQLVSDEPARAGGQDAGPAPYDYVLTGLGACTAITLRMYAD---RKGWDLGDLRVELTLLKNRDGD-----TRIERTLHTSASLSDEQWERLLEIAGKTPVTRTLQAGVSIATT 130
BLAST of NO05G04450 vs. NCBI_GenBank
Match: WP_025733138.1 (OsmC family peroxiredoxin [Carnimonas nigrificans]) HSP 1 Score: 82.4 bits (202), Expect = 1.600e-12 Identity = 44/140 (31.43%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 35 AKGSPTHVVMHEMREADSLHAVQGTSGRHTLYSDLMPEAGGGNKGPGPKEYVLTALGSCTLITMRIYSDLMIKEGKWPGKTIEKMSVTCSEHGDDHHVPTRIEVRVSLKSNLDEDQIKRLMAAAGKCPVKRMLLGGIKEG 175 + G+P V +H S H +D+ P++GGG+ P P+ Y+L ALG+CT +T+R+Y++ +WP + ++ ++V+ ++H H +E +SL+ L++ Q +RL+ A KCPV R+L G + G Sbjct: 10 SNGTPWQVALH--------------SDSHQWQADVDPQSGGGDLAPNPESYLLGALGACTAMTVRMYAE----RKQWPLQGVD-VTVSIAQHDKQH---VHLERHISLQGELNDQQRQRLLEIAEKCPVHRLLTGEVTIG 127 The following BLAST results are available for this feature:
BLAST of NO05G04450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04450 ID=NO05G04450|Name=NO05G04450|organism=Nannochloropsis oceanica|type=gene|length=549bpback to top protein sequence of NO05G04450.1 >NO05G04450.1-protein ID=NO05G04450.1-protein|Name=NO05G04450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=183bpback to top Synonyms
Publications
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