NO05G04350, NO05G04350 (gene) Nannochloropsis oceanica

Overview
NameNO05G04350
Unique NameNO05G04350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2280
Alignment locationchr5:1119711..1121990 -

Link to JBrowse

Properties
Property NameValue
DescriptionRossmann-fold nad-binding domain-containing protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1119711..1121990 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
Homology
BLAST of NO05G04350 vs. NCBI_GenBank
Match: EWM28039.1 (rossmann-fold nad -binding domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 443.7 bits (1140), Expect = 5.900e-121
Identity = 231/366 (63.11%), Postives = 274/366 (74.86%), Query Frame = 0
Query:   31 LLLLACLQFLLSYSSVGVVAFILTTPRGGFAATDKSSCTMSCTTPSRHRSTTTMHASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVFAEDNGGTVDETAPLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTFMKALNPPSAVSTASNSSGSDSVK 397
            LL LA L  +L+ S+VGV AF+L TP    A         S ++  RH +   M AST E DLLVVGMGTLG FLGQ+WR++ G +A IYGETST++RH DLR++GV+P +RSER   LA+ G   + HVVFCVPPSKN+DYV EV+ AL+LW+GKGGFVFTSSGGV+AED GGTV+E+A LS NPRMSKIL AE  V A GGTV+RLAGLYTQTRGPHTFWLSKGEVGATE+G+INLLHYEDAARATMA LLHHH        +   +N GR+LLISD+ PLTRKQICEAAV SP F G+Y+MPIFK   +  RSLGKVYDTS SRAALGGW P+YPSF  FM +  P  A +  S  + + +V+
Sbjct:   28 LLFLASLHLMLTRSTVGVFAFVLATPHRSLAKVHSLILDSSISSTVRH-TCMDMQASTQEKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSPNPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHH--------EKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSRPSEAEAAKSGHTTNAAVR 384          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: XP_005840148.1 (hypothetical protein GUITHDRAFT_64569 [Guillardia theta CCMP2712] >EKX53168.1 hypothetical protein GUITHDRAFT_64569 [Guillardia theta CCMP2712])

HSP 1 Score: 214.5 bits (545), Expect = 5.800e-52
Identity = 116/284 (40.85%), Postives = 171/284 (60.21%), Query Frame = 0
Query:   90 ENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVFAEDNGGTVDETAPLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTF 374
            + DLLVVG GTLG  L Q  ++   PEA +  ET T+++H  L+++G E       A  ++Q G  K+ +VVFC  P  N++Y  EV  AL +WSG G FVFTSSGGV+AE +GGTV+E +P++++ R  K+++AE+     GG+V+RLAGLYT  RG H +WL+ G+V     G+I L+ YEDAA A +  L    +++            G + +I D    TR+ ICE+A+ + ++  + ++P+F  +E     +GK YD SK+     GW PRYPSF  F
Sbjct:    4 QRDLLVVGAGTLGSLLIQQHKEKF-PEARVVAETRTDAKHEALKSLGAE-------ARTVSQAGDEKFANVVFCAAPGGNDNYAAEVDRALNMWSGAGKFVFTSSGGVYAESSGGTVNEQSPVASSARTQKLIDAEKCTTERGGSVLRLAGLYTLERGAHNYWLNAGKVDGRPDGLIGLVSYEDAAAAALTVLSSEKSVK------------GEVFVICDGKEQTRQDICESALKTAMYRDK-KLPVFTTTE---GPIGKRYDISKALEL--GWKPRYPSFDEF 261          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: OAP10522.1 (EMB2799 [Arabidopsis thaliana])

HSP 1 Score: 208.4 bits (529), Expect = 4.200e-50
Identity = 117/293 (39.93%), Postives = 171/293 (58.36%), Query Frame = 0
Query:   85 HASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVF-AEDNGGTVDET--APLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTFM 375
            H S G NDLL+VG G LG  + + WR    PE+ I+G+T T + H +L  +G++PS++        ++G  K+ +V+FC PPS++ DY GEV+ A   W+G+G F+FTSS   +   DNG   +++   PL  +PR   +L+AE+VV   GGTV+RLAGLYT+TRG HT+WLSK  + A    I+NL+HYEDAA   +A +                K   RI L  D++PL+R+++ +    S  F+ +     FK        LGK  + SK+RA + GW P+YPSF  F+
Sbjct:   25 HVSIGANDLLIVGPGVLGRLVAEQWRQE-HPESQIFGQTVTTNHHGELENLGIKPSLKG------TEYG-GKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRGAHTYWLSKETIDARPDHILNLIHYEDAASLAVAIM--------------KKKAGARIFLGCDNHPLSRQEVMDLMAQSGKFDKK-----FKGFTSTSGPLGKKLNNSKTRAEI-GWEPKYPSFAQFL 289          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: NP_181441.3 (NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana] >AAL38267.1 unknown protein [Arabidopsis thaliana] >AAM47876.1 unknown protein [Arabidopsis thaliana] >AEC09632.1 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana])

HSP 1 Score: 207.2 bits (526), Expect = 9.300e-50
Identity = 117/292 (40.07%), Postives = 170/292 (58.22%), Query Frame = 0
Query:   85 HASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVF-AEDNGGTVDET--APLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTF 374
            H S G NDLL+VG G LG  + + WR    PE+ I+G+T T + H +L  +G++PS++        ++G  K+ +V+FC PPS++ DY GEV+ A   W+G+G F+FTSS   +   DNG   +++   PL  +PR   +L+AE+VV   GGTV+RLAGLYT+TRG HT+WLSK  + A    I+NL+HYEDAA   +A +                K   RI L  D++PL+R+++ +    S  F+ +     FK        LGK  + SK+RA + GW P+YPSF  F
Sbjct:   83 HVSIGANDLLIVGPGVLGRLVAEQWRQE-HPESQIFGQTVTTNHHGELENLGIKPSLKG------TEYG-GKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRGAHTYWLSKETIDARPDHILNLIHYEDAASLAVAIM--------------KKKAGARIFLGCDNHPLSRQEVMDLMAQSGKFDKK-----FKGFTSTSGPLGKKLNNSKTRAEI-GWEPKYPSFAQF 346          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: BAD44172.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 207.2 bits (526), Expect = 9.300e-50
Identity = 117/292 (40.07%), Postives = 170/292 (58.22%), Query Frame = 0
Query:   85 HASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVF-AEDNGGTVDET--APLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTF 374
            H S G NDLL+VG G LG  + + WR    PE+ I+G+T T + H +L  +G++PS++        ++G  K+ +V+FC PPS++ DY GEV+ A   W+G+G F+FTSS   +   DNG   +++   PL  +PR   +L+AE+VV   GGTV+RLAGLYT+TRG HT+WLSK  + A    I+NL+HYEDAA   +A +                K   RI L  D++PL+R+++ +    S  F+ +     FK        LGK  + SK+RA + GW P+YPSF  F
Sbjct:   83 HVSIGANDLLIVGPGVLGRLVAEQWRQE-HPESQIFGQTVTTNHHGELENLGIKPSLKG------TEYG-GKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRGAHTYWLSKETIDARPDHILNLIHYEDAASLAVAIM--------------KEKAGARIFLGCDNHPLSRQEVMDLMAQSGKFDKK-----FKGFTSTSGPLGKKLNNSKTRAEI-GWEPKYPSFAQF 346          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: XP_023640982.1 (uncharacterized protein LOC17890251 isoform X2 [Capsella rubella])

HSP 1 Score: 207.2 bits (526), Expect = 9.300e-50
Identity = 116/293 (39.59%), Postives = 170/293 (58.02%), Query Frame = 0
Query:   85 HASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVF-AEDNGGTVDET--APLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTFM 375
            H S G NDLL+VG G LG  + + W+    PE+ I+G+T+T + H +L  + ++P +   + T+       K+ +V+FC PPS++ DY GEV+ A   W+GKG F+FTSS   +   DNG   +++   PL  +PR   +L+AE+VV   GGTV+RLAGLYT+TRG HT+WL+KG + A    I+NL+HYEDAA   +A +                K  GRI L  D++PL+R+++ +    S    G+Y    FK        LGK  D S++R  + GW P+YPSF  F+
Sbjct:   84 HVSIGANDLLIVGPGVLGRLVAEQWKQQEHPESQIFGQTATTNHHDELEKLDIKPLL---KGTEFGD----KFSYVIFCAPPSQSADYAGEVRNAALNWNGKGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRGAHTYWLNKGTIDARPDHILNLIHYEDAASLAVAVM--------------KKKPGGRIFLGCDNHPLSRQEVMDLMNQS----GKYDQK-FKGFTSTSGPLGKKLDNSRTREEI-GWEPKYPSFAQFL 349          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: XP_010505571.1 (PREDICTED: uncharacterized protein LOC104782361 [Camelina sativa])

HSP 1 Score: 206.1 bits (523), Expect = 2.100e-49
Identity = 116/293 (39.59%), Postives = 171/293 (58.36%), Query Frame = 0
Query:   85 HASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVF-AEDNGGTVDET--APLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTFM 375
            H S G NDLL+VG G LG  + + WR    PE+ I+G+T+T + H +L  + ++P +   + T+       K+ +++FC PPS++ DY GEV+ A   W+GKG F+FTSS   +   DNG   +++   PL  +PR   +L+AE+VV   GGTV+RLAGLYT++RG HT+WL+KG + A    I+NL+HYEDAA   +A +                K+ GRI L  D++PL+R+ + +    S    G+Y    FK        LGK  D S++RA + GW P+YPSF  F+
Sbjct:  132 HVSIGANDLLIVGPGVLGRLVAEQWRQE-HPESQIFGQTATTTHHDELEMLDIKPFL---KGTEFGD----KFSYLIFCAPPSQSPDYAGEVRNAASNWNGKGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTESRGAHTYWLNKGTIDACPDHIVNLIHYEDAASLAVAVM--------------KKKSGGRIFLGCDNHPLSRQDVMDLMNQS----GKYDQK-FKGFTSTSGPLGKKLDNSRTRAEI-GWKPKYPSFAQFL 396          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: XP_020885797.1 (uncharacterized protein LOC9317695 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 205.7 bits (522), Expect = 2.700e-49
Identity = 128/333 (38.44%), Postives = 184/333 (55.26%), Query Frame = 0
Query:   56 PRGGFAATDKSSCTMSCTTPSRHRSTTTM-----------HASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVF-AEDNGGTVDET--APLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTFM 375
            P+  F     SS      TP +  S++T+           H S G NDLL+VG G LG  + + WR    PE  I G+T T + H +L  +G++PS++        ++G  K+ +V+FC PPS++ DY GEV+ A   W+G+G F+FTSS   +   DNG   +++   PL  +PR   +L+AE+VV   GGTV+RLAGLYT+TRG HT+WLSKG V A    I+NL+HYEDAA   +A +                K  GRI L  D++PL+R+++ +    S    G+Y    F+        LGK  + SK+RA + GW P+YPSF  F+
Sbjct:   45 PKSSFFLPSTSS---KMATPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQE-HPECQIVGQTVTTNHHDELEKLGIKPSLKG------TEYG-GKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRGAHTYWLSKGTVDARPDHILNLIHYEDAASLAVAIM--------------KKKPGGRIFLGCDNHPLSRQEVMDLMDQS----GKYDKK-FEGFTSTSGPLGKKLNNSKTRAEI-GWEPKYPSFAQFL 346          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: XP_010509073.1 (PREDICTED: uncharacterized protein LOC104785539 [Camelina sativa])

HSP 1 Score: 204.1 bits (518), Expect = 7.800e-49
Identity = 116/293 (39.59%), Postives = 170/293 (58.02%), Query Frame = 0
Query:   85 HASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVF-AEDNGGTVDET--APLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTFM 375
            H S G NDLL+VG G LG  + Q WR    PE+ I+G+T+T + H +L  + ++P +   + T+       K+ +V+FC PPS++ DY GEV+ A   W+GKG F+FTSS   +   DNG   +++   PL  +PR   +L+AE+VV   GGTV+RLAGLYT++RG HT+WL+K  + A    I+NL+HYEDAA   ++ +                K  GRI L  D++PL+R+++ +    S    G+Y    FK        LGK  D S++RA + GW P+YPSF  F+
Sbjct:   86 HVSIGANDLLIVGPGVLGRLVAQQWRQE-HPESQIFGQTATTTHHDELEKLDIKPFL---KGTEFGD----KFSYVIFCAPPSQSPDYAGEVRNAASNWNGKGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTESRGAHTYWLNKSTIDARPDHILNLIHYEDAASLAVSVM--------------KKKPGGRIFLGCDNHPLSRQEVMDLMDQS----GKYDQK-FKGFTSTSGPLGKKLDNSRTRAEI-GWEPKYPSFAQFL 350          
BLAST of NO05G04350 vs. NCBI_GenBank
Match: XP_023640981.1 (uncharacterized protein LOC17890251 isoform X1 [Capsella rubella])

HSP 1 Score: 203.8 bits (517), Expect = 1.000e-48
Identity = 116/293 (39.59%), Postives = 170/293 (58.02%), Query Frame = 0
Query:   85 HASTGENDLLVVGMGTLGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLAQHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVF-AEDNGGTVDET--APLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHTFWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKNDGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKVYDTSKSRAALGGWVPRYPSFKTFM 375
            H S G NDLL+VG G LG  + + W+    PE+ I+G+T+T + H +L  + ++P +   + T+       K+ +V+FC PPS++ DY GEV+ A   W+GKG F+FTSS   +   DNG   +++   PL  +PR   +L+AE+VV   GGTV+RLAGLYT+TRG HT+WL+KG + A    I+NL+HYEDAA   +A +                K  GRI L  D++PL+R+++ +    S    G+Y    FK        LGK  D S++R  + GW P+YPSF  F+
Sbjct:   84 HVSIGANDLLIVGPGVLGRLVAEQWKQE-HPESQIFGQTATTNHHDELEKLDIKPLL---KGTEFGD----KFSYVIFCAPPSQSADYAGEVRNAALNWNGKGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRGAHTYWLNKGTIDARPDHILNLIHYEDAASLAVAVM--------------KKKPGGRIFLGCDNHPLSRQEVMDLMNQS----GKYDQK-FKGFTSTSGPLGKKLDNSRTREEI-GWEPKYPSFAQFL 348          
The following BLAST results are available for this feature:
BLAST of NO05G04350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28039.15.900e-12163.11rossmann-fold nad -binding domain-containing prote... [more]
XP_005840148.15.800e-5240.85hypothetical protein GUITHDRAFT_64569 [Guillardia ... [more]
OAP10522.14.200e-5039.93EMB2799 [Arabidopsis thaliana][more]
NP_181441.39.300e-5040.07NAD(P)-binding Rossmann-fold superfamily protein [... [more]
BAD44172.19.300e-5040.07unnamed protein product [Arabidopsis thaliana][more]
XP_023640982.19.300e-5039.59uncharacterized protein LOC17890251 isoform X2 [Ca... [more]
XP_010505571.12.100e-4939.59PREDICTED: uncharacterized protein LOC104782361 [C... [more]
XP_020885797.12.700e-4938.44uncharacterized protein LOC9317695 [Arabidopsis ly... [more]
XP_010509073.17.800e-4939.59PREDICTED: uncharacterized protein LOC104785539 [C... [more]
XP_023640981.11.000e-4839.59uncharacterized protein LOC17890251 isoform X1 [Ca... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003421NSK003421Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04350.1NO05G04350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585073gene_3250Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g85gene2595Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04350.1NO05G04350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04350 ID=NO05G04350|Name=NO05G04350|organism=Nannochloropsis oceanica|type=gene|length=2280bp
GCTCATTGAGGGAGCTTGCTGGACTGGATTTGCAGTGCTAGGGGTACATC
TATGGATATACTCGGCATATCATTCATGCTTGATTGGTATAAGTATTTTT
CTGAAACACTATCATCTGAGTCAAAGATGAACAGAAGGGCTGCCCAGACG
CAATTATTCAGGATGTCAGAGAAGAAGAGCCTCACACTCATCCATCTCAT
CATGAAGAAACACAGGACAAGTCCGGCAATTCAATCATGCCCTTCAGCCC
CGGCACCCAACACCGATTTCTAAGACCAACGACAAATTCAGCACCTTCCC
CTTCATCGCCCCGAGGCCCCTTCCTCCTGCTCCTCTTGGCCTGCCTCCAG
TTTCTACTCTCTTACTCCTCCGTTGGAGTCGTTGCCTTCATATTAACGAC
ACCTCGAGGCGGCTTCGCAGCGACCGATAAGTCCTCTTGCACCATGTCTT
GCACCACTCCGTCTAGGCATCGCAGCACCACGACCATGCATGCTAGTACA
GGAGAGAATGACCTGTTGGTGGTGGGGATGGGCACTCTAGGCGTCTTCCT
CGGGCAAGCCTGGCGTGACGCGCTTGGACCGGAGGCCACAATCTACGGCG
AGACAAGCACTGAAAGCCGCCATGCCGATTTGCGGGCTATGGGTGTTGAA
CCAAGTGTGCGGAGCGAGCGTGCAACAAAGCTGGCTCAACATGGGATGGC
GAAGTATCCGCATGTGGTATTTTGTGTCCCGCCTTCGAAAAACGAGGATT
ATGTGGGAGAGGTGCAAGGAGCCTTAGAACTATGGTCAGGCAAAGGAGGT
TTCGTCTTCACTTCTTCCGGCGGGGTGTTCGCGGAGGATAATGGAGGGAC
AGTGGATGAAACGGCCCCTCTGTCAACCAACCCGCGGATGAGCAAAATCC
TGGAGGCGGAGCGTGTGGTAGCAGCGGCTGGAGGGACGGTGATGCGTCTG
GCAGGGCTCTACACCCAGACAAGGGGGCCGCATACATTCTGGTTGAGCAA
GGGAGAAGTGGGGGCAACTGAGCAGGGGATTATCAATTTGTTGCACTATG
AAGATGCTGCCAGGGCGACGATGGCGGGCTTGCTTCATCACCACACCATA
CGAGTAGACAATAACGGCCAAAACAACAGCAAGAATGACGGACGGATTCT
CCTCATTTCCGACGATAACCCTTTGACACGCAAGCAAATCTGCGAGGCGG
CTGTGGCTTCTCCACTGTTTGAGGGTCAATACCAGATGCCTATTTTCAAG
CCGTCGGAGGAGGGGAAACGGAGCTTGGGCAAAGTGTATGACACGTCGAA
ATCACGGGCGGCGTTGGGGGGGTGGGTGCCGAGGTATCCTTCGTTTAAAA
CGTTTATGAAAGCTTTAAACCCGCCGTCTGCTGTGTCCACAGCGAGCAAC
AGTAGTGGTAGTGACTCTGTGAAACGGTGAGAAGGGAGAAGGCTGCGTTT
TGTTGTGAAGATATTATGTTGTTTTGGTGTGTGTGTGCGCGGAAGCGGAG
AAAGGGGAGTTTCTTACTTGCTTGAAGACGGAATAGAAAATCAGATATTA
CAATGATAGCGTCACACTACTTGAATGAGCTCGCTGTTCTTTTTCTTTTT
CTTGTCCTTCTTTACCATAGGGCGTTGTTGAGTCACTGCTCACTCCCAGC
TTTGTTAATCGCTGGATATGTAATTGGCAGGGACTTGCAGCATTTGTTTT
TTTTTGGGGCAATCCAAGAGCTTTCCGGTACTGCTGTTGCTCTCGATTTT
ACTTGCGGTAACGATAGAATAATTGGTCGATGCTGCTGGTTAAAAAAAAG
TCTTCAACTATTTCGATTCAAAACCGAAATTGTGCTTGTTTCATTCAACC
AGAAATAATGCTCCATGGCCTCGGCCAAAAATCTTGGTTGGGAAAGAAGA
TTTTCCTACCCAACCCGTCATCTATTCCTTTTGGCATGAAATAAAAGGCA
GATAACCGCTGCATTGCCCGCTGGTACGCCGCGTCGCTCCAATTGAGGAT
TATCACGTGTGAGGTAACGGCCGGGAGCAATAGGACATTCAGCACCAGCT
TGAGCGGAGACCGACGAAGGCGCAACCAGTTCTGCCAGGGATCAAGCCAT
GATTTACGCTTATGTGCTGTCGAGGAATTTAGGCCAATGACGGCGGCTGG
CACCGGGGGCAGAGGCGGAGGTGGGGAGGTCGGGGTGATGGTGATGATTA
TATGGGGAGGAGGGGGTGTGGCTTGTACTTGGGCGTGGCAGGTGGCTATC
CTCTGCACCTGGTAACTCCATTATGGCTGT
back to top

protein sequence of NO05G04350.1

>NO05G04350.1-protein ID=NO05G04350.1-protein|Name=NO05G04350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bp
MPFSPGTQHRFLRPTTNSAPSPSSPRGPFLLLLLACLQFLLSYSSVGVVA
FILTTPRGGFAATDKSSCTMSCTTPSRHRSTTTMHASTGENDLLVVGMGT
LGVFLGQAWRDALGPEATIYGETSTESRHADLRAMGVEPSVRSERATKLA
QHGMAKYPHVVFCVPPSKNEDYVGEVQGALELWSGKGGFVFTSSGGVFAE
DNGGTVDETAPLSTNPRMSKILEAERVVAAAGGTVMRLAGLYTQTRGPHT
FWLSKGEVGATEQGIINLLHYEDAARATMAGLLHHHTIRVDNNGQNNSKN
DGRILLISDDNPLTRKQICEAAVASPLFEGQYQMPIFKPSEEGKRSLGKV
YDTSKSRAALGGWVPRYPSFKTFMKALNPPSAVSTASNSSGSDSVKR*
back to top
Synonyms
Publications