NO05G04240, NO05G04240 (gene) Nannochloropsis oceanica

Overview
NameNO05G04240
Unique NameNO05G04240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1833
Alignment locationchr5:1091934..1093766 -

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Properties
Property NameValue
DescriptionProtein of unknown function (DUF1336)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1091934..1093766 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009769DUF1336
Homology
BLAST of NO05G04240 vs. NCBI_GenBank
Match: GAX15117.1 (hypothetical protein FisN_12Lh189 [Fistulifera solaris])

HSP 1 Score: 78.2 bits (191), Expect = 6.900e-11
Identity = 73/343 (21.28%), Postives = 123/343 (35.86%), Query Frame = 0
Query:   77 WEGTPASAFNVRGPAYKRTGRKQPSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPG--------FPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRAPYDAEVRGRFKVIASCANLDGLNLPSFISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTK-FPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYEKAV 411
            W+     +  VR   Y  T +K PS    Y  +  D  ++      H    MG  +  P   Y           P +FIV+  LP   P + SS   G   +    F +K  T D+L K +                ++   ++ L +++ RRAP D + + RFK++ +  NL  + +P +I+ YNG P LI   G+    +S                                                                               DV++H F +LAK+ + ++K   F   ++   F+IEG  D+ELPE ++G  +L + + + A+
Sbjct:  661 WKVDRGDSLLVRSHGYLSTKKKVPSPGELYDCIHMDAFESP-----HRYPDMGARVQLPEVKYDDGDVKKTWRAPDIFIVSIALPTDPPKLGSSSSDGGGYTITAYFRMKQKTRDIL-KRVTAEGYDVTSEKVGDPQKSQVNAVRLFEEWCRRAPTDGKFQSRFKIVPNAHNLKEIGMPGWIAKYNGTPFLIKRPGQTGFLFS----------------------------------------------------------------------HPELSCMEFDVSLHVFPYLAKQAICFMKESFFRKTLVTFGFVIEGRTDDELPECLIGLFQLCYPDPQYAI 927          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: GAX23617.1 (hypothetical protein FisN_12Hh189 [Fistulifera solaris])

HSP 1 Score: 75.5 bits (184), Expect = 4.500e-10
Identity = 72/343 (20.99%), Postives = 123/343 (35.86%), Query Frame = 0
Query:   77 WEGTPASAFNVRGPAYKRTGRKQPSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPG--------FPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRAPYDAEVRGRFKVIASCANLDGLNLPSFISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTK-FPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYEKAV 411
            W+     +  VR   Y  T +K PS    Y  +  D  ++      H    MG  +  P   +           P +FIV+  LP   P + SS   G   +    F +K  T D+L K +                ++   ++ L +++ RRAP D + + RFK++ +  NL  + +P +I+ YNG P LI   G+    +S                                                                               DV++H F +LAK+ + ++K   F   ++   F+IEG  D+ELPE ++G  +L + + + A+
Sbjct:  661 WKVDRGDSLLVRSHGYLSTKKKIPSPGELYDCIHMDAFESP-----HRYPDMGARVQLPEVKHDDGDIKKTWRAPDIFIVSIALPTDPPKLGSSSSDGGGYTITAYFRMKQETRDIL-KRVTAEGYDASSEKVDDPQKSQVNAVRLFEEWCRRAPTDGKFQSRFKIVPNAHNLKEIGMPGWIAKYNGTPFLIKRPGQTGFLFS----------------------------------------------------------------------HPELSCMEFDVSLHVFPYLAKQAICFMKESFFRKTLVTFGFVIEGRTDDELPECLIGLFQLCYPDPKYAI 927          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: KOO29937.1 (hypothetical protein Ctob_014307 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 75.1 bits (183), Expect = 5.900e-10
Identity = 75/335 (22.39%), Postives = 119/335 (35.52%), Query Frame = 0
Query:   85 FNVR-GPAYKRTGRKQPSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYP---GFPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRAPY-------DAEVRGRFKVIASCANLDGLNLPSFISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYEK 409
            F++R GP YK  G+K+ S    Y+ V+ D  K       HV++ + L      +  P   G P   ++N +LP   P++  S   G     + VF+  A+  DL                     E+  P+  L + ++  AP        D +++ R K++    N+  L L  +++ YNGKP LIT SG +++G                                                                                + +N   FA+L KKG+  L  + P   L  A  IEG  D ELPEQ + A R+  ++  K
Sbjct:  506 FDLRVGPNYKLNGKKEASAMHVYNAVTCDVFKRKKSIQFHVSQRLTLPPPPDGKWTPNLSGLPRRLVINCILPAEAPSLMGSPTDGACYQIVLVFS--AAAADL-----------------QRWIESNCPASRLFKRFWEDAPEGVLPSNGDLDIKERMKLLPRVDNMKSLGL-GWVAGYNGKPALITKSGSIYKG---------------------------------------------------------------------------DDYLEICMNTMRFAYLTKKGVNSLFGRIPDFELHAAITIEGREDSELPEQAVAAVRITGLDLLK 745          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: XP_019161792.1 (PREDICTED: uncharacterized protein LOC109158323 [Ipomoea nil])

HSP 1 Score: 75.1 bits (183), Expect = 5.900e-10
Identity = 78/341 (22.87%), Postives = 123/341 (36.07%), Query Frame = 0
Query:   77 WEGTPASAFNVRGPAYKRTGRKQ--PSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPG-FPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRAPYD--AEVRGRFKVIASCANLDGLNLPS----FISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYEK 409
            W     + F VRGP+Y R  +K+  P+  +FY      F+  S   +NH+ARF+ L    PA   PG  PP+ IVN  +P    AIF +   G   S +F F L  +    L  H Q               E +   +   ++  +  P D  A  R R K++    N++GL L +     ++ YN KPVL       +                                                                                  +D+++H F++LA+KG +    +  + VL+    I+G + E+LPE +L   RL  ++Y K
Sbjct:  257 WSSIEPNTFKVRGPSYIRDKKKESAPNSAAFYPFGVDVFL--SPRKINHIARFVEL----PAIDSPGEIPPILIVNLQIPLYSAAIFQNEYDGEGVSFVFYFKLSENYSKELPAHFQ---------------ENIRKLIHDEKEKIKGFPIDTSAPFRERLKILGRVVNIEGLQLSATEKKLMNAYNEKPVLSRPQHEFY---------------------------------------------------------------------------LDKNYFEIDLDIHRFSYLARKGFETFHDRVKNFVLDFGLTIQGNKAEDLPEHLLCCLRLKEIDYSK 501          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: XP_010683310.1 (PREDICTED: uncharacterized protein LOC104898017 [Beta vulgaris subsp. vulgaris] >KMT07177.1 hypothetical protein BVRB_6g155020 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 74.7 bits (182), Expect = 7.700e-10
Identity = 80/350 (22.86%), Postives = 127/350 (36.29%), Query Frame = 0
Query:   67 PSSPAPPR--HTWEGTPASAFNVRGPAYKRTGRKQ--PSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPGFPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRAPYD--AEVRGRFKVIASCANLDGLNLPS----FISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEY 407
            P SP   +   +W     ++F VR   + R  +K   P+  ++Y L    F+  S   V HVARF+ L  +  +    GFPPL IVN  +P   PA F +   G   + +  F +  S +  +    Q               EA+   +    +  +  P D  A  R R K++   ANLD LN+ +     I+ YN KPVL       F G +                                                                              +D+++H F+++++KG +    +    VL+    I+G + EELPEQ+L   RLN ++Y
Sbjct:  236 PFSPLEKKIMDSWSPVEPNSFRVRAQNFFRDKKKDFAPNYAAYYPLGVDVFL--SPRKVEHVARFVQLPSVNSS---AGFPPLLIVNAQVPLYPPAFFQNEADGEGINIVMYFKINESFLKEVPSSFQ---------------EAIRKMMHDEVEKVKSFPMDTIAPFRERLKILGRLANLDDLNISAAEKKLINAYNEKPVLSRPQHEFFSGEN---------------------------------------------------------------------------YFEIDLDMHRFSYISRKGFEAFIDRLKMCVLDFGLTIQGNKAEELPEQILCCVRLNGLDY 490          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: XP_011008098.1 (PREDICTED: uncharacterized protein LOC105113572 isoform X1 [Populus euphratica])

HSP 1 Score: 73.9 bits (180), Expect = 1.300e-9
Identity = 75/343 (21.87%), Postives = 122/343 (35.57%), Query Frame = 0
Query:   77 WEGTPASAFNVRGPAYKRTGRKQ--PSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPGFPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRA---PYD--AEVRGRFKVIASCANLDGLNL----PSFISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYEK 409
            W      +F VRG +Y R  +K+  P   ++Y      F+  S   V+H+ARF+ L ++  A     FPP+ +VN  +P    AIF S   G   + +  F L  S +  L  H Q                       L+ D   +    P D  A  R R K++    N++ L+L     + + +YN KPVL       + G                                                                                +D+++H F+++++KG +    +    VL++   I+G + EELPEQ+L   RLN ++Y K
Sbjct:  292 WSHIEPCSFKVRGQSYFRDKKKEFAPDCSAYYPFGVDVFL--SPRKVDHIARFVDLPIINSA---GNFPPILVVNVQVPLYPAAIFQSESDGEGTNFVLYFKLSDSYLKELPAHFQESIRR------------------LIDDEVEKVKGFPVDTIAPFRERLKILGRVVNVEDLHLSAAEKNLMQDYNEKPVLSRPQHEFYLG---------------------------------------------------------------------------DNYFEIDIDMHRFSYISRKGFQAFLDRLKICVLDIGLTIQGNKVEELPEQILCCIRLNGIDYMK 536          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: XP_011008099.1 (PREDICTED: uncharacterized protein LOC105113572 isoform X2 [Populus euphratica])

HSP 1 Score: 73.9 bits (180), Expect = 1.300e-9
Identity = 75/343 (21.87%), Postives = 122/343 (35.57%), Query Frame = 0
Query:   77 WEGTPASAFNVRGPAYKRTGRKQ--PSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPGFPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRA---PYD--AEVRGRFKVIASCANLDGLNL----PSFISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYEK 409
            W      +F VRG +Y R  +K+  P   ++Y      F+  S   V+H+ARF+ L ++  A     FPP+ +VN  +P    AIF S   G   + +  F L  S +  L  H Q                       L+ D   +    P D  A  R R K++    N++ L+L     + + +YN KPVL       + G                                                                                +D+++H F+++++KG +    +    VL++   I+G + EELPEQ+L   RLN ++Y K
Sbjct:  291 WSHIEPCSFKVRGQSYFRDKKKEFAPDCSAYYPFGVDVFL--SPRKVDHIARFVDLPIINSA---GNFPPILVVNVQVPLYPAAIFQSESDGEGTNFVLYFKLSDSYLKELPAHFQESIRR------------------LIDDEVEKVKGFPVDTIAPFRERLKILGRVVNVEDLHLSAAEKNLMQDYNEKPVLSRPQHEFYLG---------------------------------------------------------------------------DNYFEIDIDMHRFSYISRKGFQAFLDRLKICVLDIGLTIQGNKVEELPEQILCCIRLNGIDYMK 535          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: XP_009836372.1 (hypothetical protein H257_11199 [Aphanomyces astaci] >ETV74265.1 hypothetical protein H257_11199 [Aphanomyces astaci])

HSP 1 Score: 73.6 bits (179), Expect = 1.700e-9
Identity = 74/340 (21.76%), Postives = 125/340 (36.76%), Query Frame = 0
Query:   75 HTW-EGTPASAFNVRGPAYKRTGRKQPSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPGFPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRAPYDAEVRGRFKVIASCANLDGLNLPSF----ISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYEKA 410
            H W     A  FNVR   YK++ +K+PS  + +  V  D V+T  G ++ +A+ + +    P+    G   LFI++  +P   P++F+S   GP  S I  + +  +  + L                        P+  LL  +   +  D  +  RFKVIA   N     +  +    ++  NG PVL     R++                                                                                  +DV+VH F+ +A+ G+  L  K   M++++AF+++G  ++ELPEQVLG  RL  ++  KA
Sbjct:  587 HAWSRHAAACTFNVRSKEYKKSKKKEPSQAALFEFVGVDVVRTD-GKIDCIAQHVNVP---PS---VGNSRLFILHAQMPLYAPSLFTSSYDGPGASLIMYWTIPEAVEEALRTPDS-------------------PATHLLARFLNAS--DPSILDRFKVIAQVVNEADCGVTGYTKKLLTKNNGTPVLTRPQHRMYH---------------------------------------------------------------------------TPAYTEVDVDVHVFSLVARTGIHALVDKTAGMLIDVAFVLQGESEDELPEQVLGVCRLVRVDLSKA 823          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: EJK53099.1 (hypothetical protein THAOC_27522 [Thalassiosira oceanica])

HSP 1 Score: 73.2 bits (178), Expect = 2.200e-9
Identity = 58/245 (23.67%), Postives = 88/245 (35.92%), Query Frame = 0
Query:  165 GGPSRSAIFVFALKASTVDLLEKHMQXXXXXXXXXXXXXXXEALPPSLLLLQDYFRRAPYDAEVRGRFKVIASCANLDGLNLPSFISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYEKA 410
            GG + S   VFAL   T+D L                    +   P++ L  ++ RRA  +A+ RGRFK +    +++   +P FI+ YNGKP L+T SG   +                                                                                   +NV  + +LA+KGL  L   FP+ VL + F IEG  D+ELPE +LG  R+  ++ ++A
Sbjct:   11 GGDTYSIPLVFALSKDTLDQLR-----------------DLDTASPAVRLFSEWCRRAEDEADFRGRFKCMGMIEDVESSGVPQFIAGYNGKPALVTKSGTFTR--------------------------------------------------------------------------HGGRYIEFTINVDRWGYLARKGLCALTPSFPNFVLNIGFTIEGRGDDELPEALLGGVRVANLDPDRA 164          
BLAST of NO05G04240 vs. NCBI_GenBank
Match: XP_002293070.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89531.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 72.4 bits (176), Expect = 3.800e-9
Identity = 87/372 (23.39%), Postives = 124/372 (33.33%), Query Frame = 0
Query:   67 PSSPAPPRH-TWEGTPASAFNVR-GPAYKRTGRKQPSLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPGFPPLFIVNTLLPDGEPAIFSSVEGGPSRSAIFV------FALKASTV-DLLEKHMQXXXXXXXXXXXXXXXEA------LPPSLLLLQDYFRRAPYDA----------------EVRGRFKVIASCANLDGLNLPSFISNYNGKPVLITNSGRLFQGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAARLNFMEYE 408
            P S AP  H +W     + F VR GP Y R G+K+ S  S Y + S  F ++    V    R M L             P  +   +  DG  +     E G   S +          LK + + D+L  H                 +       L PS   L +   R P  A                ++R RFK +A   +++  N    + +YNGKPVLIT SGR+  GY                                                                               M  NVH +AF+AKKG   L  KF +M +E+ F IE   + E+PE +LG+  L+++  E
Sbjct:  332 PESTAPTTHPSWTPVDGTEFKVRTGPNYPRLGKKENSKPSLYEVYSVRFFRSGKRTVGGATRIMPL-------------PEMVEGVV--DGVNSDAEGTEKGTKESKLLSGGNSSHLELKGTKIPDVLVVHFMLPYEPPNMFKQKDDGQGGECVYYLRPSQRFLDEVAGRTPSTAATQLFIRWCNECHSNPDMRARFKCMALVRDIEKHNF-GLLKSYNGKPVLITESGRVCSGY-----------------------------------------------------------------------HGDTRYLEMTANVHYWAFMAKKGFVSLIPKFKNMQMEVGFTIEAHAEHEMPECMLGSTVLSYISEE 616          
The following BLAST results are available for this feature:
BLAST of NO05G04240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX15117.16.900e-1121.28hypothetical protein FisN_12Lh189 [Fistulifera sol... [more]
GAX23617.14.500e-1020.99hypothetical protein FisN_12Hh189 [Fistulifera sol... [more]
KOO29937.15.900e-1022.39hypothetical protein Ctob_014307 [Chrysochromulina... [more]
XP_019161792.15.900e-1022.87PREDICTED: uncharacterized protein LOC109158323 [I... [more]
XP_010683310.17.700e-1022.86PREDICTED: uncharacterized protein LOC104898017 [B... [more]
XP_011008098.11.300e-921.87PREDICTED: uncharacterized protein LOC105113572 is... [more]
XP_011008099.11.300e-921.87PREDICTED: uncharacterized protein LOC105113572 is... [more]
XP_009836372.11.700e-921.76hypothetical protein H257_11199 [Aphanomyces astac... [more]
EJK53099.12.200e-923.67hypothetical protein THAOC_27522 [Thalassiosira oc... [more]
XP_002293070.13.800e-923.39predicted protein [Thalassiosira pseudonana CCMP13... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003434NSK003434Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04240.1NO05G04240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553848gene_3237Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g72gene2584Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04240.1NO05G04240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04240 ID=NO05G04240|Name=NO05G04240|organism=Nannochloropsis oceanica|type=gene|length=1833bp
ACATCAGACAGCACTCGCGGAGCCGCCTTTCTCATGCGTACCCTTCCACG
CACTGGACACCAATCGGCGAGAAGCGAATAACCAATATATTGTCTTGAGC
TTGGCCTGGGCCGGCAACTCTCCCGCACTTCAGTGCCTTGTCGTCGTCAT
CTACCACCAGCACCAGCACCACAACCACCGCTAGCATCATAAGCTCCATC
ATGATGAAAAACAGTGCGACTACATTACTTGTGCCGGGATCCACTGTGCC
ATCGGCCTCAATTCACTCCCTGGATCACCTGACCACGGCCTCTACCACTG
CCACCCTGGACTATAGACAAGACGGCAATCGCAATGCCGAGGACCAAAAC
ATCACACAGCAAACATCAACACCTGCGTCTGAGCTTTTGAAATATTTTCC
CTCCTCTCCTGCACCCCCGAGACACACCTGGGAGGGCACGCCTGCCTCGG
CCTTTAATGTCCGCGGACCCGCATACAAGCGCACAGGGCGAAAACAACCG
TCGCTCGATTCGTTTTACAGCTTGGTTTCCTTCGACTTTGTCAAAACATC
AGCAGGCTGCGTCAATCACGTTGCACGTTTCATGGGCTTGGAACTATTGC
GTCCAGCCAGGTGCTACCCTGGGTTTCCTCCTCTCTTTATCGTCAACACC
CTATTGCCTGATGGCGAGCCGGCCATATTTAGTAGCGTTGAGGGTGGGCC
CAGCCGAAGTGCGATCTTTGTGTTTGCTTTGAAGGCGTCCACCGTGGACT
TGCTTGAGAAACACATGCAGGAGCAGGAGCAAGGGGAGGGAAAGGGAGAA
AGGGGAAGAGGTAGGGAAGCATTGCCTCCATCTCTATTGCTCTTGCAAGA
TTATTTTCGAAGGGCACCGTACGATGCGGAGGTGCGGGGGAGGTTTAAGG
TTATTGCCAGTTGTGCAAATCTGGATGGATTGAATTTACCTTCTTTCATC
TCCAATTATAATGGTAAACCAGTCTTGATCACTAACAGTGGTCGCCTCTT
CCAGGGCTACTCCTCCTCGTCCTCCTCGTCCTCCTCCTCGTCCTCCTCCC
CCTCCTTTTCTTCTTCCTCTCCTATATCTCTCTCCTACCCTTCTTTTCCC
ACAACCATTAATACCACCACCACAATCTCCCCCTCCTGCTCCTCCTCCTC
CTTCTCCTGCCCCTCCTCCTCCTCCTTTTTAACCTCCTCCTCTGGTTCCT
CCTCCTCCCCTCTCTCTACTTCCTCGTCTGAATTGCTTTACCTAGAAATG
GACGTCAACGTCCATTGTTTCGCGTTCCTGGCCAAGAAGGGGCTCAAATA
CTTAAAAACGAAGTTCCCCTCCATGGTGCTAGAAATGGCGTTTCTGATCG
AGGGCGGAAGAGATGAAGAGTTGCCAGAGCAAGTGTTGGGAGCAGCGAGG
TTGAATTTTATGGAATACGAGAAGGCGGTGGATGGGGTGTTTGACGGATT
GAGGAAAGAGGAGAGAGAGGGCTAGGGGGAGGGAGGGGGAGGAGGAAGAG
TGGGAGGAGATGGAGGGAGATGAAGGACTTGTAGTGAGGATTTGGTAGAA
GGAATTCGATACCTAGCAGGCGATAAGTGGCCGTATCTGCAGCTGCTGCT
GCTACTGCTGCTGCTGCTGCTGTGTGAGAGGTAAGTGTATGGATAAATGA
AGGGTGACGGGGAAAGCAGTGGTGTATTCTGTCGAGAGGGCGAGGAGGAA
AAGAATGAGACGAGGAGGGAAAGAGGGTCGGGACTTATTTTTTTGGTATA
TTCACAAAGTCGCAAGCAGCATGTACAGGAAAAGCAAGGAAATCAGAGAA
ATATTTGAAGCAGAAAGAACGCGTCGCTGTTTA
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protein sequence of NO05G04240.1

>NO05G04240.1-protein ID=NO05G04240.1-protein|Name=NO05G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=425bp
MMKNSATTLLVPGSTVPSASIHSLDHLTTASTTATLDYRQDGNRNAEDQN
ITQQTSTPASELLKYFPSSPAPPRHTWEGTPASAFNVRGPAYKRTGRKQP
SLDSFYSLVSFDFVKTSAGCVNHVARFMGLELLRPARCYPGFPPLFIVNT
LLPDGEPAIFSSVEGGPSRSAIFVFALKASTVDLLEKHMQEQEQGEGKGE
RGRGREALPPSLLLLQDYFRRAPYDAEVRGRFKVIASCANLDGLNLPSFI
SNYNGKPVLITNSGRLFQGYSSSSSSSSSSSSSPSFSSSSPISLSYPSFP
TTINTTTTISPSCSSSSFSCPSSSSFLTSSSGSSSSPLSTSSSELLYLEM
DVNVHCFAFLAKKGLKYLKTKFPSMVLEMAFLIEGGRDEELPEQVLGAAR
LNFMEYEKAVDGVFDGLRKEEREG*
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Synonyms
Publications