NO05G04210, NO05G04210 (gene) Nannochloropsis oceanica

Overview
NameNO05G04210
Unique NameNO05G04210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2314
Alignment locationchr5:1086467..1088780 -

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Properties
Property NameValue
Descriptionmagnesium-protoporphyrin IX methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1086467..1088780 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046406magnesium protoporphyrin IX methyltransferase activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0015995chlorophyll biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR010251Mg_prot_MeTrfase
IPR010940Mg_prot_MeTrfase_C
Homology
BLAST of NO05G04210 vs. NCBI_GenBank
Match: EWM28013.1 (mg-protoporphyrin ix methyl transferase [Nannochloropsis gaditana])

HSP 1 Score: 478.4 bits (1230), Expect = 1.600e-131
Identity = 240/274 (87.59%), Postives = 254/274 (92.70%), Query Frame = 0
Query:   24 MKTALVLITTAASLSCTLAFVPLVPVNQRQRSAVRMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADGVKGESICDAGCGVGSLAIPMAKLGAKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAV 298
            M+T LV +  AA+LSC  AFVP VP  Q QRS  R+MAATKPK  + G DDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWL+ADGVKGESICDAGCGVGSLAIPMA+LGAKV+ASDISSSMANEG+ RAEAVLGKATARARC+FSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILK+IG LFPGPSKTTRAYLHTE DVRKAL+ AGFTV+RT+MTATNFYFSRLLEAV
Sbjct:    1 MRTTLVAVAAAATLSCAFAFVPFVPARQTQRSTTRIMAATKPKVTSVGTDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLQADGVKGESICDAGCGVGSLAIPMAELGAKVAASDISSSMANEGRQRAEAVLGKATARARCSFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKKIGELFPGPSKTTRAYLHTEEDVRKALKAAGFTVRRTEMTATNFYFSRLLEAV 274          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: XP_002287591.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95034.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 310.5 bits (794), Expect = 5.900e-81
Identity = 164/271 (60.52%), Postives = 198/271 (73.06%), Query Frame = 0
Query:   32 TTAASLSCTLAFVP---LVPVNQRQRSAVRMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADG-VKGESICDAGCGVGSLAIPMAKLGAKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVR 299
            TT  +L  T+A VP     PV+   R A      T        VDDKTEVREYFN EGF RWN+IYSE   VN VQ DIR GH QT+ KIL W++ DG +KG+++CD GCGVGSLAIP+A++GA++SASDIS +MA E   RA+A +G   A+    F TSDLE++ GKY+TVTCVDV IHYPT+KM  MV  L SLA +R++ISFAPKTWYYD+LK+ G LFPGPSKTTRAYLH E+ VR+AL++AGF V R +MT TNFYFSRLLEA R
Sbjct:    6 TTVLALVATIAVVPTSAFAPVSSNTRVAAPSSTTTS---LASAVDDKTEVREYFNNEGFNRWNKIYSESDEVNSVQLDIRNGHDQTIQKILNWIKDDGDIKGKTVCDCGCGVGSLAIPLAQMGAEISASDISDAMATEAAARAKA-MGIENAK----FYTSDLESVTGKYNTVTCVDVAIHYPTEKMAEMVGHLCSLADERVLISFAPKTWYYDLLKKFGELFPGPSKTTRAYLHEESVVREALKKAGFEVAREEMTGTNFYFSRLLEAKR 268          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: CBJ48352.1 (Magnesium-protoporphyrin IX methyltransferase, putative chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 307.8 bits (787), Expect = 3.800e-80
Identity = 149/226 (65.93%), Postives = 179/226 (79.20%), Query Frame = 0
Query:   74 DKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADGVKGESICDAGCGVGSLAIPMAKLGAKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVRE 300
            DK EV EYFN  GF+RWN+IYSE   VN VQ DIR GH QT+DK+L W+E DG      CDAGCGVGSL+IP+A+LGAKV++SDIS++M  E + RA+A LG+     R +F+TSDLE L G YDTV C+DVMIHYPT+KM  MVSKL S++K R+I+SFAP TWYY +LK+IG LFPGPSKTTRAYLHTE  VRKAL   GF +KRT+MT+TNFY+SR+LEAVRE
Sbjct:   68 DKEEVTEYFNNNGFERWNKIYSESDEVNDVQRDIRTGHGQTIDKVLRWVEEDGSAKSVFCDAGCGVGSLSIPLARLGAKVASSDISAAMTGEAEERAKAELGRDA--KRISFTTSDLENLTGSYDTVLCIDVMIHYPTEKMSDMVSKLCSMSKNRVILSFAPDTWYYSLLKKIGELFPGPSKTTRAYLHTEEAVRKALAAEGFAIKRTEMTSTNFYYSRMLEAVRE 291          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: XP_005764756.1 (protoporphyrin IX methyltransferase [Emiliania huxleyi CCMP1516] >EOD12327.1 protoporphyrin IX methyltransferase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 307.4 bits (786), Expect = 5.000e-80
Identity = 159/245 (64.90%), Postives = 189/245 (77.14%), Query Frame = 0
Query:   58 RMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADG---VKGESICDAGCGVGSLAIPMAKLGAKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVRE 300
            R +AA++   P   VDDK+EV EYFN EGF RWNRIYSEDG VN VQ DIR GH QTVDKIL W+++DG   +   + CDAGCGVGSLAIP+A+ GA V ASDI+ +MA+E + RA A LG +    R +FSTSDLE+L G+YDTV+C+DVMIHYP +KM GMV  LG +AK+R+I+SFAP TWYY  LK+ G LFPGPSKTTRAYLHTE  V KAL EAGF   RT+MT TNFYFSRL+EAVR+
Sbjct:   23 RCLAASRAASPV-CVDDKSEVEEYFNNEGFNRWNRIYSEDGEVNAVQLDIRTGHGQTVDKILKWVDSDGRESLSDGTWCDAGCGVGSLAIPLAQRGATVVASDIAGAMASEAERRA-ADLGLS---ERASFSTSDLESLSGEYDTVSCIDVMIHYPPEKMAGMVGHLGGIAKERLILSFAPDTWYYRALKRFGELFPGPSKTTRAYLHTEEAVLKALSEAGFAPSRTEMTGTNFYFSRLIEAVRQ 262          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: XP_005791706.1 (protoporphyrin IX methyltransferase [Emiliania huxleyi CCMP1516] >EOD39277.1 protoporphyrin IX methyltransferase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 307.4 bits (786), Expect = 5.000e-80
Identity = 159/245 (64.90%), Postives = 189/245 (77.14%), Query Frame = 0
Query:   58 RMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADG---VKGESICDAGCGVGSLAIPMAKLGAKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVRE 300
            R +AA++   P   VDDK+EV EYFN EGF RWNRIYSEDG VN VQ DIR GH QTVDKIL W+++DG   +   + CDAGCGVGSLAIP+A+ GA V ASDI+ +MA+E + RA A LG +    R +FSTSDLE+L G+YDTV+C+DVMIHYP +KM GMV  LG +AK+R+I+SFAP TWYY  LK+ G LFPGPSKTTRAYLHTE  V KAL EAGF   RT+MT TNFYFSRL+EAVR+
Sbjct:   23 RCLAASRAASPV-CVDDKSEVEEYFNNEGFNRWNRIYSEDGEVNAVQLDIRTGHGQTVDKILKWVDSDGRESLSDGTWCDAGCGVGSLAIPLAQRGATVVASDIAGAMASEAERRA-ADLGLS---ERASFSTSDLESLSGEYDTVSCIDVMIHYPPEKMAGMVGHLGGIAKERLILSFAPDTWYYRALKRFGELFPGPSKTTRAYLHTEEAVLKALSEAGFAPSRTEMTGTNFYFSRLIEAVRQ 262          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: GAX20820.1 (magnesium-protoporphyrin O-methyltransferase [Fistulifera solaris])

HSP 1 Score: 303.1 bits (775), Expect = 9.300e-79
Identity = 165/259 (63.71%), Postives = 192/259 (74.13%), Query Frame = 0
Query:   42 AFVPLVPVNQRQRSAVRMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADG-VKGESICDAGCGVGSLAIPMAKLGA-KVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVR 299
            AFVP     QR    V  +A+T         DDKTEVREYFNTEGF RWN+IYS+   VNKVQ DIR GH QT+ KIL WL+ADG V+ ++ CD GCGVGSLAIP+A++GA KVSASDIS SMANE K RA+A LG   A     F TSDLE++ G+YDTVTCVDV IHYP +KM  M+  L SL+K R++ISFAPKTWYY  LK+IG LFPGPSKTTRAYLH E+ +R AL + GF V+R +MTATNFYFSRLLEA R
Sbjct:   15 AFVP----TQRSAFGVTHLASTTQ-------DDKTEVREYFNTEGFNRWNKIYSDSDDVNKVQLDIRNGHDQTIQKILNWLQADGTVQQQTFCDCGCGVGSLAIPLAQMGAKKVSASDISDSMANEAKRRAQA-LGIQNAE----FYTSDLESVTGQYDTVTCVDVAIHYPDEKMVEMIEHLCSLSKDRVMISFAPKTWYYVFLKKIGELFPGPSKTTRAYLHEESIIRDALTKCGFAVQREEMTATNFYFSRLLEAKR 257          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: GAX11754.1 (magnesium-protoporphyrin O-methyltransferase [Fistulifera solaris])

HSP 1 Score: 302.4 bits (773), Expect = 1.600e-78
Identity = 164/259 (63.32%), Postives = 193/259 (74.52%), Query Frame = 0
Query:   42 AFVPLVPVNQRQRSAVRMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADG-VKGESICDAGCGVGSLAIPMAKLGA-KVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVR 299
            AFVP    +QR    V  +A+T         DDKTEVREYFNTEGF RWN+IYS+   VNKVQ DIR GH QT+ KIL WL+ADG V+ ++ CD GCGVGSLAIP+A++GA KVSASDIS +MANE K RA+A LG   A     F TSDLE++ G+YDTVTCVDV IHYP +KM  M+  L SL+K R++ISFAPKTWYY  LK+IG LFPGPSKTTRAYLH E+ +R AL + GF V+R +MTATNFYFSRLLEA R
Sbjct:   65 AFVP----SQRSAFGVTHLASTTQ-------DDKTEVREYFNTEGFNRWNKIYSDSDDVNKVQLDIRNGHDQTIQKILNWLQADGTVQQQTFCDCGCGVGSLAIPLAQMGAKKVSASDISDAMANEAKRRAQA-LGIRNAE----FYTSDLESVTGQYDTVTCVDVAIHYPDEKMVEMIEHLCSLSKDRVMISFAPKTWYYVFLKKIGELFPGPSKTTRAYLHEESIIRDALTKCGFAVQREEMTATNFYFSRLLEAKR 307          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: XP_002178460.1 (magnesium-protoporphyrin IX methyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >EEC50125.1 magnesium-protoporphyrin IX methyltransferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 299.3 bits (765), Expect = 1.300e-77
Identity = 163/265 (61.51%), Postives = 190/265 (71.70%), Query Frame = 0
Query:   35 ASLSCTLAFVPLVPVNQRQRSAVRMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADG-VKGESICDAGCGVGSLAIPMAKLGAKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVR 299
            A LS   AFVP V       SA+   A           DDKTEVREYFNTEGF RWN+IYS+   VN VQ DIR GH QT+ KIL W+ ADG + G+S+CD GCGVGSLAIP+A++GAKVSASDIS +M+ E   RA  +  KA       F TSDLE++ GKY TVTCVDV IHYP DK + MV+ L SLA+ R++ISFAPKTWYY  LK+IG LFPGPSKTTRAYLH E+ VR+AL++AGF V R +MTATNFYFSRLLEA R
Sbjct:   10 ALLSSASAFVPSVHSVSSAGSALFSSA-----------DDKTEVREYFNTEGFSRWNKIYSDTDDVNSVQMDIRNGHDQTIQKILKWIAADGDIDGKSVCDCGCGVGSLAIPLAQMGAKVSASDISDAMSTEAARRAGELGVKAD------FYTSDLESVSGKYHTVTCVDVAIHYPDDKFKEMVTHLCSLAEDRVLISFAPKTWYYVFLKKIGELFPGPSKTTRAYLHEESIVREALQQAGFEVARDEMTATNFYFSRLLEAKR 257          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: OLP96426.1 (Magnesium protoporphyrin IX methyltransferase, chloroplastic [Symbiodinium microadriaticum])

HSP 1 Score: 298.1 bits (762), Expect = 3.000e-77
Identity = 146/225 (64.89%), Postives = 172/225 (76.44%), Query Frame = 0
Query:   72 VDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADGVKGESICDAGCGVGSLAIPMAKLGAKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEA 297
            VDDK  V EYFNT GF+RW +IY E   VN VQ DIRVGH QTVDKILGWL+ + + G+++CDAGCG GSL+IP+A  GA V+ SDISS+M  E ++RA+  L    A     FSTSDLEA+ G YDTV CVDV+IHYP DKM GMV  L  L+K+R+I+SFAPKTWYY +LK+IG LFPG SKTTRAYLH EADV  AL++AG+ V R DMTATNFYFSRL EA
Sbjct:  868 VDDKKVVEEYFNTTGFERWQKIYGETDDVNPVQKDIRVGHAQTVDKILGWLDPNTISGKTVCDAGCGTGSLSIPLASRGAMVNGSDISSAMVGEAEVRAKDSL---PAEKLPKFSTSDLEAISGSYDTVCCVDVLIHYPPDKMSGMVQHLAGLSKERLILSFAPKTWYYKLLKRIGELFPGKSKTTRAYLHDEADVEAALQQAGYQVTRKDMTATNFYFSRLFEA 1089          
BLAST of NO05G04210 vs. NCBI_GenBank
Match: OEU18786.1 (Mg-protoporphyrin IX methyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 295.8 bits (756), Expect = 1.500e-76
Identity = 164/273 (60.07%), Postives = 192/273 (70.33%), Query Frame = 0
Query:   31 ITTAASLSCTLAFV----PLVPVNQRQRSAVRMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTVNKVQADIRVGHQQTVDKILGWLEADG-VKGESICDAGCGVGSLAIPMAKLGAKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTVTCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLFPGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVR 299
            +T+AA LS    FV       P+    R+ V   +A++       VDDKTEVREYFNTEGF RWN+IYSE   VN VQ DIR GH QT+ KIL W+  DG + G+S+CD GCGVGSLAIP+A++GAK+SASDIS SMA+E   RAE  LG   A+    F TSDLE++ G YDTVTCVDV IHYP+D+M  MV  L SL+  R+I SFAPKTWYY  LK+ G LFPGPSKTTRAYLH E  VR AL +AGF V R +MT TNFYFSRLLEA R
Sbjct:    3 LTSAAVLS--FLFVGGASGFAPIATSSRNGVSSSSASESSSCL-HVDDKTEVREYFNTEGFNRWNKIYSESDEVNTVQLDIRTGHGQTIQKILNWISDDGNISGKSVCDCGCGVGSLAIPLAQMGAKISASDISDSMADEASRRAEE-LGIKDAK----FYTSDLESVTGTYDTVTCVDVAIHYPSDQMAEMVGHLCSLSSDRVIFSFAPKTWYYSALKKFGELFPGPSKTTRAYLHEEQVVRDALTKAGFQVAREEMTGTNFYFSRLLEAKR 267          
The following BLAST results are available for this feature:
BLAST of NO05G04210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28013.11.600e-13187.59mg-protoporphyrin ix methyl transferase [Nannochlo... [more]
XP_002287591.15.900e-8160.52predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBJ48352.13.800e-8065.93Magnesium-protoporphyrin IX methyltransferase, put... [more]
XP_005764756.15.000e-8064.90protoporphyrin IX methyltransferase [Emiliania hux... [more]
XP_005791706.15.000e-8064.90protoporphyrin IX methyltransferase [Emiliania hux... [more]
GAX20820.19.300e-7963.71magnesium-protoporphyrin O-methyltransferase [Fist... [more]
GAX11754.11.600e-7863.32magnesium-protoporphyrin O-methyltransferase [Fist... [more]
XP_002178460.11.300e-7761.51magnesium-protoporphyrin IX methyltransferase [Pha... [more]
OLP96426.13.000e-7764.89Magnesium protoporphyrin IX methyltransferase, chl... [more]
OEU18786.11.500e-7660.07Mg-protoporphyrin IX methyltransferase [Fragilario... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003436NSK003436Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04210.1NO05G04210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|540328gene_3233Nannochloropsis oceanica (N. oceanica CCMP1779)gene
PPMTgene2580Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04210.1NO05G04210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04210 ID=NO05G04210|Name=NO05G04210|organism=Nannochloropsis oceanica|type=gene|length=2314bp
CGAAACTGTCTGTGCAAGAGAATAGGACGGGGAAAATGGGTCAGATAAGG
CGTTAAGCGTGTTTCTCCGCGTGCAAGTGCTAACGTGTACGCCTCCGATA
ACGGAAGCTTGGGATTATGGGGGCCAACAAAGCAAGAAGGCAGACCAGAG
AAGGAGCGTGGTCTTTCCTTGGGGAGGCCAGAGTGCGGCAACTTTCACCT
TGGCAAACGCAAACGGGAGAAGGCCAAACCTCACAGAATATACTCCACCA
AAACCTGCTCGATCTACCATTCCCTTCGCACTGTCGGAGGAGGGCGAGTA
AGGGGATGTTTCTGAGTGGGTTTCGAAGGAACAATCTGCACTATATTACG
AACAACGACGCAGTCGCGCCAAAATCGGATCCCCATACGGTAACAAGCCT
TCCCCAACCCGCACCCTCACTCTCAGACCGAAAGCAAAGCACCATACTCA
GAAGAGCCAACGTAGATCATACCCAATAGACTGGAGCATGAAGGCCTCAC
GGCTTGTCCTGGGGAGAAGAATGAGATAATAAATTCGACCCCCAACCCCC
CACCAAAAAGCAAGCAATATCTTGCACATTGCATCGTGCCATGATGTTCC
TGCGTCGATGCATTATGTCCGAGCCACGTTTAATCCACATGTGTGTTTCT
CTGTCTCACTGGTTTCCATCTAACACAACTCATGTCTGCCTCCCAGCAAC
AGGATCACCGCCTCCTCCCGTCGTTGACCTTCCCCATCTACAGAATCACC
ATGAAGACTGCTCTCGTGCTCATAACGACTGCTGCCTCCCTCAGCTGCAC
GCTGGCCTTTGTGCCGCTTGTCCCTGTTAATCAGCGGCAAAGATCAGCTG
TCCGgtacgtgaagatgatgaagagatggttgaagggcagagaagtgcca
gagggaatggttcagcaagaaacctcgacttagcaagcatgaaagtaaag
ttcgatctatcccccagaactggcattgtaagggctaccaaacgcgtttg
tgtgatactgaaaggcgaagtgtaacataacgcttctcctcctcatggtc
taacgctgccgtgcttcatattcattgtttgtgcgagtgggagggctcgg
aacaaatagccctgcctcggttcgatctattgctagtcagccaacattcc
ccatataagacctgaaagccctcttcaaaactccctcagtctcatcccaa
atcactcactgcttttatctttgatatctctgcctaatcgcagCATGATG
GCCGCCACGAAACCCAAGCCCCCGACCGGCGGCGTGGACGACAAGACCGA
AGTCCGCGAATACTTTAACACCGAGGGGTTCCAACGCTGGAACCGCATAT
ACAGCGAAGATGGGACAGTGAACAAGGTGCAAGCAGACATTCGTGTGGGG
CACCAACAAACCGTCGATAAAATCTTGGGGTGGCTCGAAGCGGACGGAGT
GAAGGGGGAGAGCATTTGCGATGCAGGCTGTGGGGTCGGGTCCTTGGCCA
TTCCCATGGCTAAGCTTGGAGCCAAGGTCTCAGCGTCGGATATCAGTTCC
TCGATGGCAAACGAGGGAAAGCTGAGGGCTGAGGCCGTGTTGGGGAAGGC
TACGGCCAGGGCGCGTTGTGCGTTCTCAACCAGTGACTTGGAGGCATTAA
AGGGGAAATACGACACCGTGACCTGTGTGGATGTGATGATTCACTATCCC
ACTGACAAGATGCAGGGGATGGTGAGCAAGCTGGGTTCATTGGCAAAGAA
GAGGATGATTATTTCTTTTGCTCCCAAGACTTGGTACTACGACATCTTGA
AGCAGATCGGTGGGCTTTTCCCCGGGCCGAGTAAAACAACCCGTGCGTAT
TTGCACACCGAGGCAGATGTTCGCAAGGCTTTGGAAGAGGCAGGATTCAC
GGTGAAGCGTACGGACATGACGGCGACCAACTTTTATTTTTCGCGGTTGT
TGGAGGCGGTGCGTGAATAAAGTGGAAGGAGAGAGTCAAAGCCTTGGGTT
AGGCGGGGGAAGATGGACGAATGGAAGGAAAAGGGCGGGGGGAGGGGGGA
TTGCCTTGACAATTTTGAAAGGGGAGACACCAGATGCTCCAGATTAAGAC
AGAAAAAAAAGGGGATGGGCATCGTGCTTGTGCAGGCCGATGGGTAGGAT
GGAGGAAGGGGGATAGAGTAGAGGAGATGCGGGCCAGGAAGGCAGGGACA
ATCAATTGCTTCACAAAGCATGTCACCAACTAAATTACTACAAGCATTCA
GCTGCATTAAAAAATGGACACCTTTTGATGTTGCTGAATATCATTTCTCG
TACGTTTCGCTGCC
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protein sequence of NO05G04210.1

>NO05G04210.1-protein ID=NO05G04210.1-protein|Name=NO05G04210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=300bp
MSASQQQDHRLLPSLTFPIYRITMKTALVLITTAASLSCTLAFVPLVPVN
QRQRSAVRMMAATKPKPPTGGVDDKTEVREYFNTEGFQRWNRIYSEDGTV
NKVQADIRVGHQQTVDKILGWLEADGVKGESICDAGCGVGSLAIPMAKLG
AKVSASDISSSMANEGKLRAEAVLGKATARARCAFSTSDLEALKGKYDTV
TCVDVMIHYPTDKMQGMVSKLGSLAKKRMIISFAPKTWYYDILKQIGGLF
PGPSKTTRAYLHTEADVRKALEEAGFTVKRTDMTATNFYFSRLLEAVRE*
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Synonyms
Publications