NO05G04200, NO05G04200 (gene) Nannochloropsis oceanica

Overview
NameNO05G04200
Unique NameNO05G04200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2055
Alignment locationchr5:1084101..1086155 -

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Properties
Property NameValue
DescriptionRibonuclease Zc3h12a-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1084101..1086155 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR031595PRORP_C
IPR033443PPR_long
Homology
BLAST of NO05G04200 vs. NCBI_GenBank
Match: EWM27950.1 (Ribonuclease Zc3h12a-like protein [Nannochloropsis gaditana])

HSP 1 Score: 673.7 bits (1737), Expect = 4.800e-190
Identity = 355/578 (61.42%), Postives = 421/578 (72.84%), Query Frame = 0
Query:    1 MSVKRDVAAAALDMEGDSKRRNGSTQQSTSEILPQKE----PTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAEAEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-------------------------ATAATP--AAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKAGSEEWMCVQVRRKDGEEGVNE 548
            M++KR   AA L+ +  SK  + S   S S +         P ++  +  L+Q+KRMK+LLASDPAAAE+MDYRRR+G+ARRDDD+PTALQLF D+QAR+ID+G EGFNALIALLTTFER  +A+ VLT+MR KH  LTEATYV +MRALALG +  +PEAAE LL EML+ G RPRLRSYSPI+VGYA+QGK+  AF LYDKML   IEPTE ELVALL+ C         EGGG    + FYR + ++Q+LVLEPGEGAWEA+  WF                           AA P   + E+ V  GVV+D  GVC  CG VL+SI L+S+A+ EL+T VEELVLA+ AR  +W  FK+WL G     R   PEFD V+DGANVGYFQMNYAQAP HVNYEQISWVVEHF   GK+PLLVLHARHVD R++PP Y  LV+ WRER LLLVVPYRNNDDWFWLF TVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQ +FSFGG+E+GGGRSV+I+ PAVYS+CIQGP + K   G+E  E+WHLP+AG ++W+CVQVRR       N+
Sbjct:    1 MALKRVYEAAPLNEDVGSK-PSASVPPSQSILSESSSSPNAPPQDHNDGSLRQTKRMKRLLASDPAAAERMDYRRRLGLARRDDDIPTALQLFADVQARDIDIGSEGFNALIALLTTFERLEDADQVLTHMRRKHFSLTEATYVCIMRALALGGR--QPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGC-------SGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRA--PEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGRE-DENWHLPRAGDDKWLCVQVRRGGATHAQND 565          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: OQR97935.1 (hypothetical protein ACHHYP_09428 [Achlya hypogyna])

HSP 1 Score: 263.8 bits (673), Expect = 1.200e-66
Identity = 170/514 (33.07%), Postives = 262/514 (50.97%), Query Frame = 0
Query:   35 QKEPTEEQKNRMLKQ-SKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAEAEA---------VLTYMRE------KHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWFATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKAGSEEWM 533
            +K P EE K  M KQ +KRM+++    P   E M YR+R+    +  D   AL +F ++Q +    G  G   +  ++     QA A++         VL YM++      K  P+ E  Y ++ R   L ++    + AE +L E+      P+LR++SP+++ YA   ++  A+++Y+K+++H +E TE E  ALL                 K  +  Y+++    +++LEP E  WE ++EWF       ++   V +G V D  GVC   G  L+S++L+      L+T VE LV     R   W  FK WL+       T  P FDV++D AN+GYF  NY       +Y QI  V+  ++ RGK+ L+VLH R   DR++P +   LV+ WR+ G++      NNDDW+WL+  V  GGRTL+V+NDEMRDHHFQM+    F RWKERH  ++     ++  GR +  + P VYS+             +   +SWH P    E W+
Sbjct:    6 EKRPREESK--MAKQAAKRMRRM---SPHEVELMGYRKRIEACMQSGDAKEALAVFRELQEK----GLSGQAYIYQMVLNLCGQAPADSGISLEDAFGVLEYMKKTLVPNGKKHPVDETCYSALAR---LCAQQHATDRAEGVLAELEEAQVLPKLRTFSPLLIEYAASDRLADAWRIYEKIVSHGLEATETEYAALLHAAARV-----------KDADMVYKILDIFMDVILEPQESTWEVLREWF------TSDGWTVETGTV-DESGVCSVTGSTLESVELSEAKQAALMTKVEGLVCTSDERTEQWAAFKEWLD-------TNGP-FDVILDAANIGYFSQNY--EGGGFSYRQIQRVLSAYQARGKKVLIVLHKRRTSDRQVPEDLRPLVQAWRDDGVMYNCLPGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFQMIHNVDFHRWKERHLVHY-----DKDAGRFI-FDEPRVYSK-----------RSQHLAKSWHFPTPDKETWL 462          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: POM65966.1 (Hypothetical protein PHPALM_18243 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 254.6 bits (649), Expect = 7.000e-64
Identity = 160/539 (29.68%), Postives = 270/539 (50.09%), Query Frame = 0
Query:   20 RRNGSTQQSTSEILPQKEPTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGM--ARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAE------------AEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-ATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKAG-------SEEWMCVQV 537
            +R+       ++  P ++ T+ Q+ R  +Q+             AEK++Y+ R+ +    + +D   AL+L+  +++ ++ V    +N +I + +  +  A              EA     ++K     E  Y +M++   L S+ Q  ++ E ++ EM +   +P+LR++  ++  ++  G ++    +++++L+H++E TE + VALL+ C +A              ERFY  + +  + + +P    W  +K+WF + AA     + K+T G V   +GVC   G  L S++L+++ + ELL  +E+LV  +  R   W+ FK WLE         +  FDVV+D ANVGY   N+       NY QI  +V+H+E + K+ L+VLH R   D ++PPE+   +  WR    +      NNDDW+WLF  V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQ ++   G        V ++ P  YS              +  G++WH P  G       +  W+CVQ+
Sbjct:   10 KRSAEVAAVANDTEPVRKLTKTQRRRERRQT------------PAEKLEYQFRIQVQNCAQQNDATRALELYEQMKSESVKVAPYIYNVVINICSKAQDPAAFKTGAYRVYQDMKEARTASQQKKKSESEEPMYSAMIK---LCSQAQDFDSCETIIAEMEAAKVKPKLRTFGLLLQAHSDVGNLDKCVWVHERILSHELELTEDDYVALLRACVKAGN-----------AERFYAFLDKFIDEIWQPSLSTWNVLKDWFNSEAAQEDGRKWKITEGTV-SKEGVCSVTGDQLQSLELSAELTTELLAKIEKLVRTDEKRMAQWDEFKQWLE--------EFGPFDVVIDAANVGYCNQNF--EGGGFNYGQIELMVQHYETQDKKVLIVLHERRTSDEQVPPEHHAQMAQWRASHKMFNCQVGNNDDWYWLFAAVKLGGRTLMVSNDEMRDHHFQMIHNRAFGRWKERHQVHYQVHGSR------VMVDEPLPYS-----------ARPQRVGDNWHFPSQGDSTTETVARRWLCVQL 494          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: ETK79389.1 (hypothetical protein, variant 1 [Phytophthora parasitica] >ETL32801.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETP09075.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 252.3 bits (643), Expect = 3.500e-63
Identity = 158/534 (29.59%), Postives = 264/534 (49.44%), Query Frame = 0
Query:   33 LPQKEPTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAE------------AEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-ATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKA-----------------GSEEWMCVQV 537
            +P ++ T+ Q+ R  +Q+          PA   +  YR +V    ++++   AL+++  +++  ++V    +N +I + +     A              +A  +  + K     E  Y +M++   L SK Q  +A E ++ EM +    P+LR++ P++  ++  G ++    +++K+L++++E TE + VALL+ C        K G      ERFY  +    + + +P    W+ +K+WF + AA     + ++T G V   +GVC   G  L S++L+++ + ELL  +E+LV  +  R   W+ FK WLE         +  FDVV+D ANVGY   N+       NY QI  +V+H+E + K+ L+VLH R   D ++P E+   +  WR    +    Y NNDDW+WL+T V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQ ++   G        V ++ P  YS              +  G++WH P A                    +W+CV++
Sbjct:   12 IPARKLTKTQRRRERRQT----------PAEKLEYQYRIQVQKCAQENNATRALEVYEQMKSEGMNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK---LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRAC-------VKTGN----SERFYAFLESFIDEIWQPNLSTWDVLKDWFNSEAAQVDGRKWRITEGTV-SKEGVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLE--------EFGPFDVVIDAANVGYCNQNF--DGGGFNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVHYQVHGSR------VTVDEPLPYS-----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 493          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: XP_008910946.1 (hypothetical protein PPTG_15930 [Phytophthora parasitica INRA-310] >ETN03719.1 hypothetical protein PPTG_15930 [Phytophthora parasitica INRA-310])

HSP 1 Score: 251.9 bits (642), Expect = 4.500e-63
Identity = 158/534 (29.59%), Postives = 263/534 (49.25%), Query Frame = 0
Query:   33 LPQKEPTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAE------------AEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-ATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKA-----------------GSEEWMCVQV 537
            +P ++ T+ Q+ R  +Q+          PA   +  YR +V    +++D   AL+++  +++  ++V    +N +I + +     A              +A  +  + K     E  Y +M++   L SK Q  +A E ++ EM +    P+LR++ P++  ++  G ++    +++K+L++++E TE + VALL+ C        K G      ERFY  +    + + +P    W+ + +WF + AA     + ++T G V   +GVC   G  L S++L+++ + ELL  +E+LV  +  R   W+ FK WLE         +  FDVV+D ANVGY   N+       NY QI  +V+H+E + K+ L+VLH R   D ++P E+   +  WR    +    Y NNDDW+WL+T V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQ ++   G        V ++ P  YS              +  G++WH P A                    +W+CV++
Sbjct:   27 IPARKLTKTQRRRERRQT----------PAEKLEYQYRIQVQNCAQENDATRALEVYEQMKSEGMNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK---LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRAC-------VKTGN----SERFYAFLESFIDEIWQPNLSTWDVLNDWFNSEAAQVDGRKWRITEGTV-SKEGVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLE--------EFGPFDVVIDAANVGYCNQNF--DGGGFNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVHYQVHGSR------VTVDEPLPYS-----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 508          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: ETK79388.1 (hypothetical protein L915_14751 [Phytophthora parasitica] >ETL32800.1 hypothetical protein L916_14666 [Phytophthora parasitica] >ETP09074.1 hypothetical protein F441_15025 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 251.5 bits (641), Expect = 5.900e-63
Identity = 158/533 (29.64%), Postives = 263/533 (49.34%), Query Frame = 0
Query:   34 PQKEPTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAE------------AEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-ATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKA-----------------GSEEWMCVQV 537
            P ++ T+ Q+ R  +Q+          PA   +  YR +V    ++++   AL+++  +++  ++V    +N +I + +     A              +A  +  + K     E  Y +M++   L SK Q  +A E ++ EM +    P+LR++ P++  ++  G ++    +++K+L++++E TE + VALL+ C        K G      ERFY  +    + + +P    W+ +K+WF + AA     + ++T G V   +GVC   G  L S++L+++ + ELL  +E+LV  +  R   W+ FK WLE         +  FDVV+D ANVGY   N+       NY QI  +V+H+E + K+ L+VLH R   D ++P E+   +  WR    +    Y NNDDW+WL+T V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQ ++   G        V ++ P  YS              +  G++WH P A                    +W+CV++
Sbjct:   22 PARKLTKTQRRRERRQT----------PAEKLEYQYRIQVQKCAQENNATRALEVYEQMKSEGMNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK---LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRAC-------VKTGN----SERFYAFLESFIDEIWQPNLSTWDVLKDWFNSEAAQVDGRKWRITEGTV-SKEGVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLE--------EFGPFDVVIDAANVGYCNQNF--DGGGFNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVHYQVHGSR------VTVDEPLPYS-----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 502          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: ETI39170.1 (hypothetical protein F443_15214 [Phytophthora parasitica P1569])

HSP 1 Score: 251.1 bits (640), Expect = 7.700e-63
Identity = 157/534 (29.40%), Postives = 264/534 (49.44%), Query Frame = 0
Query:   33 LPQKEPTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAE------------AEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-ATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKA-----------------GSEEWMCVQV 537
            +P ++ T+ Q+ R  +Q+          PA   +  YR +V    ++++   AL+++  +++  ++V    +N +I + +     A              +A  +  + K     E  Y +M++   L SK Q  +A + ++ EM +    P+LR++ P++  ++  G ++    +++K+L++++E TE + VALL+ C        K G      ERFY  +    + + +P    W+ +K+WF + AA     + ++T G V   +GVC   G  L S++L+++ + ELL  +E+LV  +  R   W+ FK WLE         +  FDVV+D ANVGY   N+       NY QI  +V+H+E + K+ L+VLH R   D ++P E+   +  WR    +    Y NNDDW+WL+T V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQ ++   G        V ++ P  YS              +  G++WH P A                    +W+CV++
Sbjct:   27 IPARKLTKTQRRRERRQT----------PAEKLEYQYRIQVQKCAQENNATRALEVYEQMKSEGVNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK---LCSKAQDFDACKTIVAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRAC-------VKTGN----SERFYAFLESFIDEIWQPNLSTWDVLKDWFNSEAAQVDGRKWRITEGTV-SKEGVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLE--------EFGPFDVVIDAANVGYCNQNF--DGGGFNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVHYQVHGSR------VTVDEPLPYS-----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 508          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: ETL86067.1 (hypothetical protein L917_14471 [Phytophthora parasitica])

HSP 1 Score: 251.1 bits (640), Expect = 7.700e-63
Identity = 157/534 (29.40%), Postives = 263/534 (49.25%), Query Frame = 0
Query:   33 LPQKEPTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAE------------AEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-ATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKA-----------------GSEEWMCVQV 537
            +P ++ T+ Q+ R  +Q+          PA   +  YR +V    ++++   AL+++  +++  ++V    +N +I + +     A              +A  +  + K     E  Y +M++   L SK Q  +A E ++ EM +    P+LR++ P++  ++  G ++    +++K+L++++E TE + VALL+ C        K G      ERFY  +    + + +P    W+ + +WF + AA     + ++T G V   +GVC   G  L S++L+++ + ELL  +E+LV  +  R   W+ FK WLE         +  FDVV+D ANVGY   N+       NY QI  +V+H+E + K+ L+VLH R   D ++P E+   +  WR    +    Y NNDDW+WL+T V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQ ++   G        V ++ P  YS              +  G++WH P A                    +W+CV++
Sbjct:   27 IPARKLTKTQRRRERRQT----------PAEKLEYQYRIQVQKCAQENNATRALEVYEQMKSEGVNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK---LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRAC-------VKTGN----SERFYAFLESFIDEIWQPNLSTWDVLNDWFNSEAAQVDGRKWRITEGTV-SKEGVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLE--------EFGPFDVVIDAANVGYCNQNF--DGGGFNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVHYQVHGSR------VTVDEPLPYS-----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 508          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: ETM39221.1 (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 251.1 bits (640), Expect = 7.700e-63
Identity = 157/534 (29.40%), Postives = 264/534 (49.44%), Query Frame = 0
Query:   33 LPQKEPTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAE------------AEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-ATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKA-----------------GSEEWMCVQV 537
            +P ++ T+ Q+ R  +Q+          PA   +  YR +V    ++++   AL+++  +++  ++V    +N +I + +     A              +A  +  + K     E  Y +M++   L SK Q  +A + ++ EM +    P+LR++ P++  ++  G ++    +++K+L++++E TE + VALL+ C        K G      ERFY  +    + + +P    W+ +K+WF + AA     + ++T G V   +GVC   G  L S++L+++ + ELL  +E+LV  +  R   W+ FK WLE         +  FDVV+D ANVGY   N+       NY QI  +V+H+E + K+ L+VLH R   D ++P E+   +  WR    +    Y NNDDW+WL+T V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQ ++   G        V ++ P  YS              +  G++WH P A                    +W+CV++
Sbjct:   12 IPARKLTKTQRRRERRQT----------PAEKLEYQYRIQVQKCAQENNATRALEVYEQMKSEGVNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK---LCSKAQDFDACKTIVAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRAC-------VKTGN----SERFYAFLESFIDEIWQPNLSTWDVLKDWFNSEAAQVDGRKWRITEGTV-SKEGVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLE--------EFGPFDVVIDAANVGYCNQNF--DGGGFNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVHYQVHGSR------VTVDEPLPYS-----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 493          
BLAST of NO05G04200 vs. NCBI_GenBank
Match: XP_008910947.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETN03720.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 251.1 bits (640), Expect = 7.700e-63
Identity = 158/533 (29.64%), Postives = 262/533 (49.16%), Query Frame = 0
Query:   34 PQKEPTEEQKNRMLKQSKRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVGHEGFNALIALLTTFERQAE------------AEAVLTYMREKHVPLTEATYVSMMRALALGSKLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKMLTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELVLEPGEGAWEAMKEWF-ATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSIDLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFDVVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHVDDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYSRCIQGPRSMKEGSGKEGGESWHLPKA-----------------GSEEWMCVQV 537
            P ++ T+ Q+ R  +Q+          PA   +  YR +V    +++D   AL+++  +++  ++V    +N +I + +     A              +A  +  + K     E  Y +M++   L SK Q  +A E ++ EM +    P+LR++ P++  ++  G ++    +++K+L++++E TE + VALL+ C        K G      ERFY  +    + + +P    W+ + +WF + AA     + ++T G V   +GVC   G  L S++L+++ + ELL  +E+LV  +  R   W+ FK WLE         +  FDVV+D ANVGY   N+       NY QI  +V+H+E + K+ L+VLH R   D ++P E+   +  WR    +    Y NNDDW+WL+T V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQ ++   G        V ++ P  YS              +  G++WH P A                    +W+CV++
Sbjct:   22 PARKLTKTQRRRERRQT----------PAEKLEYQYRIQVQNCAQENDATRALEVYEQMKSEGMNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK---LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRAC-------VKTGN----SERFYAFLESFIDEIWQPNLSTWDVLNDWFNSEAAQVDGRKWRITEGTV-SKEGVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLE--------EFGPFDVVIDAANVGYCNQNF--DGGGFNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVHYQVHGSR------VTVDEPLPYS-----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 502          
The following BLAST results are available for this feature:
BLAST of NO05G04200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27950.14.800e-19061.42Ribonuclease Zc3h12a-like protein [Nannochloropsis... [more]
OQR97935.11.200e-6633.07hypothetical protein ACHHYP_09428 [Achlya hypogyna... [more]
POM65966.17.000e-6429.68Hypothetical protein PHPALM_18243 [Phytophthora pa... [more]
ETK79389.13.500e-6329.59hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008910946.14.500e-6329.59hypothetical protein PPTG_15930 [Phytophthora para... [more]
ETK79388.15.900e-6329.64hypothetical protein L915_14751 [Phytophthora para... [more]
ETI39170.17.700e-6329.40hypothetical protein F443_15214 [Phytophthora para... [more]
ETL86067.17.700e-6329.40hypothetical protein L917_14471 [Phytophthora para... [more]
ETM39221.17.700e-6329.40hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008910947.17.700e-6329.64hypothetical protein, variant 1 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003437NSK003437Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04200.1NO05G04200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622992gene_3232Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g67gene2579Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04200.1NO05G04200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04200 ID=NO05G04200|Name=NO05G04200|organism=Nannochloropsis oceanica|type=gene|length=2055bp
AGATATCTCCATACATCTGCCTCCGTCCTCCATCAACCATTCAGCGCTTG
CTCAGGCCCCACCTGCTCCGGAGGGCAGTGGTCGTCGTCGTCGCCTCCCC
ATCATCACCCCTCATTCGCAGCCTCCCCACTTGCGTCTCAGTTCACACCA
AGCCACCGCGTCCTCGGCAGCCCGTGGACCCTGAAGACAACAATATATCG
CTTCATCGCAGGCATTCCAAGAAGCACTCTTCTCCTCTTTCCAAAAGCAA
TACAACCACCACAACCAGGAAGCCTCCCAAGCACACTCCTGCTTCTCCTC
ATAGCATGTCCGTAAAACGGGACGTTGCCGCCGCAGCCCTTGACATGGAG
GGAGATAGCAAAAGAAGGAATGGTAGCACTCAGCAATCAACTTCTGAAAT
CCTCCCCCAAAAGGAGCCTACCGAGGAACAAAAGAACCGCATGCTTAAAC
AAAGCAAGCGGATGAAAAAACTCCTTGCGTCCGACCCGGCTGCGGCTGAA
AAAATGGACTACAGGCGGCGTGTTGGCATGGCACGGCGCGATGATGATGT
GCCGACGGCGTTGCAGCTTTTTACGGACATCCAAGCGCGGAACATTGACG
TAGGACATGAGGGATTTAACGCCCTGATTGCTTTGCTCACCACCTTTGAG
CGGCAAGCGGAAGCAGAAGCTGTGCTCACATACATGCGGGAGAAACACGT
CCCGTTGACAGAAGCGACTTATGTGTCAATGATGCGTGCCTTGGCTTTAG
GGTCAAAACTCCAAAAACCGGAGGCAGCCGAAGCATTGTTGGATGAAATG
TTATCGACCGGGCAAAGACCACGATTAAGGTCGTACAGCCCTATTGTGGT
GGGGTATGCGCAGCAAGGAAAGATCAATGCAGCGTTTCAATTGTATGATA
AGATGTTGACACACAAGATTGAACCGACCGAAGTGGAGCTGGTGGCGTTG
TTGAAGGTTTGTGGGGAGGCAAGGAGGGAGGGTGGGAAGGAGGGAGGAGG
GAAGAAGGTGGAGGAGAGGTTTTATCGGGTGATGCGCGAGATGCAGGAGT
TGGTCCTGGAGCCGGGAGAAGGAGCGTGGGAGGCCATGAAAGAATGGTTT
GCAACCGCAGCGACACCAGCAGCAGAAGAAGTGAAAGTAACGAGTGGCGT
AGTCATAGACAACAAGGGGGTGTGTGGTGAGTGCGGCCAGGTCCTGGATT
CCATCGATCTCACCTCCCAAGCATCTGGAGAGTTGTTGACGATGGTAGAA
GAGCTGGTCCTCGCCGAACCCGCCCGTGCGGGGGACTGGGAGATGTTTAA
GTCCTGGTTGGAGGGAGGGAGGGAGAGCGCAAGGACGGGATGGCCCGAGT
TTGATGTGGTGGTGGATGGAGCGAACGTGGGGTATTTTCAGATGAATTAC
GCCCAGGCGCCTTCACATGTAAATTACGAGCAGATCTCTTGGGTGGTGGA
GCATTTTGAAAGGCGAGGTAAAAGGCCCTTGTTGGTATTGCATGCGCGGC
ACGTGGACGACCGAAAGATCCCGCCTGAGTACGTGGGGCTGGTCCGGGGG
TGGAGGGAGAGGGGGTTGTTGCTGGTAGTGCCTTACCGGAATAATGACGA
CTGGTTTTGGTTGTTTACGACCGTGTTTAAGGGGGGGAGGACGCTGCTGG
TCACCAACGACGAGATGCGTGACCATCACTTTCAGATGTTGTCCCAGCGG
ACGTTTTTGCGGTGGAAGGAGCGGCACCAAGCGTATTTCTCGTTTGGAGG
CCACGAGAGGGGGGGAGGGAGAAGTGTGAAGATCGAGGCGCCAGCTGTGT
ATTCGAGATGTATTCAGGGACCGAGATCGATGAAGGAGGGGAGTGGGAAG
GAGGGAGGGGAGTCTTGGCATTTGCCGAAGGCAGGGAGTGAGGAGTGGAT
GTGTGTGCAGGTACGGAGGAAGGATGGGGAGGAAGGGGTGAATGAAGAGA
AGTAAGGCGAAGGCGTAACGGCACCAACATTGCCCAGAAAAAGTACAGTG
TGAAAACATCATCCCAACAGAAGCGTAAGGGGAAGAATAAGACAACTAGC
CCGGA
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protein sequence of NO05G04200.1

>NO05G04200.1-protein ID=NO05G04200.1-protein|Name=NO05G04200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp
MSVKRDVAAAALDMEGDSKRRNGSTQQSTSEILPQKEPTEEQKNRMLKQS
KRMKKLLASDPAAAEKMDYRRRVGMARRDDDVPTALQLFTDIQARNIDVG
HEGFNALIALLTTFERQAEAEAVLTYMREKHVPLTEATYVSMMRALALGS
KLQKPEAAEALLDEMLSTGQRPRLRSYSPIVVGYAQQGKINAAFQLYDKM
LTHKIEPTEVELVALLKVCGEARREGGKEGGGKKVEERFYRVMREMQELV
LEPGEGAWEAMKEWFATAATPAAEEVKVTSGVVIDNKGVCGECGQVLDSI
DLTSQASGELLTMVEELVLAEPARAGDWEMFKSWLEGGRESARTGWPEFD
VVVDGANVGYFQMNYAQAPSHVNYEQISWVVEHFERRGKRPLLVLHARHV
DDRKIPPEYVGLVRGWRERGLLLVVPYRNNDDWFWLFTTVFKGGRTLLVT
NDEMRDHHFQMLSQRTFLRWKERHQAYFSFGGHERGGGRSVKIEAPAVYS
RCIQGPRSMKEGSGKEGGESWHLPKAGSEEWMCVQVRRKDGEEGVNEEK*
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Synonyms
Publications