NO05G04160, NO05G04160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04160 vs. NCBI_GenBank
Match: EWM27980.1 (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 1011.5 bits (2614), Expect = 1.300e-291 Identity = 565/710 (79.58%), Postives = 601/710 (84.65%), Query Frame = 0 Query: 1 MNPRSVTRTFSRQFSKRYLSKWNDKTGLKEMVEQTLADLVRVADTIDVHSNPKVAAFAARVRTQIETLRRDHDAKVIYFFNEAPETIKDIPILPAFPFKIPLVDEESDDKGEENNDEPTPLFSSRRVQPGEGVVKKKQEFVRLFKNLLTLAKQTEPSPEEEDMSWFEAPSSTLERSVPSPXXXXXXXXXXXXXXXXXPV-RSVPVSGAGQSGVDRLLMQVRQRMENKAAEVRKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELLLRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEMVPPQLRAIFQEVEGALARGLPVKLDFTALSSVLNTVKIGHRAEAFPQRDWRSSLDILASQVPLPDPLLHELNHPLYLHSSLLLATTPYNVALTKEAETDPVLLARTALAASKALGVAPSRLQVHHVVSDKACAVVVVVPDRRTTYVTFRGTKDPVDVLTDINFLSATFTPLGWEEEXXXXXXXXXXXXXXXXXFLPFIDPNNVAQGQLQMMSETEETTGTLKVHGGFKLAFDSIKDRVTELLLDEAGAGGATDHVVFVGHSMGGALAQLATVYYCELKARLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKLDVSKSAKELFEMENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWELQSGGTALKQ 710 MNPRSVTRTFS S+WNDKTGLKE+VEQTLADLVRVADTIDVHSNP+VAAFAARVRTQIETLRRDHDA+VI+FFNE P+ +K+IPILPA PFK L +SD + EE +P PLFS RRV PG GVVKKK VRLFKNLLTLA+ TEP PEEEDMSWFEAPS S P P P+ S PV+GAGQSGVDRLL QVR+RME KAAE RKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELL++G XXXXXXXXXXXXXXXXXXXXXXXXXX A+EMVPPQLRA+FQEVEGA+A+GLPVKLD A +S++N V+IGHR E FPQRDWRSSLD+L SQ PLPDPLL ELNHPLYLHSSLLLATTPYNVALTK AETDP LLARTAL ASKALGVAPSRLQVHHVVSDKACAVVVVVPD+RTTYV FRGTKDPVDVLTDINFLSA FTPLGWEEE XXXXXXXX FLPFIDPNN AQ QLQ+M+ T++ TGTLKVHGGFKLAFDSIK RVTELLLDE GAG ATD VVFVGHSMGGALAQLATVY+CEL+ARLVTFASPAIGN AFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGY+HAGVPIKLDVSKSAKELFE ENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGW+LQSGGTAL+Q Sbjct: 157 MNPRSVTRTFSXXXXXXXXSRWNDKTGLKELVEQTLADLVRVADTIDVHSNPRVAAFAARVRTQIETLRRDHDARVIFFFNEEPDIVKEIPILPACPFK-ALSPHDSDQEDEEEVVDPAPLFSPRRVAPGAGVVKKKHGVVRLFKNLLTLAQHTEPVPEEEDMSWFEAPS-----SAPDPAVGPAGVEGTMSTSPIAPLPGSGPVAGAGQSGVDRLLQQVRERMETKAAEERKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELLMQG-------GGSXXXXXXXXXXXXXXXXXXXXXXXXXXETAASIAMEMVPPQLRALFQEVEGAVAKGLPVKLDLQAWASIVNNVRIGHRVEPFPQRDWRSSLDLLVSQTPLPDPLLRELNHPLYLHSSLLLATTPYNVALTKAAETDPALLARTALVASKALGVAPSRLQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTPLGWEEEGAGXXXXXXXXRGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQ 853
BLAST of NO05G04160 vs. NCBI_GenBank
Match: CEM12972.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 223.0 bits (567), Expect = 3.100e-54 Identity = 139/329 (42.25%), Postives = 176/329 (53.50%), Query Frame = 0 Query: 420 LLARTALAASKALGVAPSRLQVHHVVSDKACAVVVVVPDRRTTYVTFRGTKDPVDVLTDINFLSATFTPLGWEEEXXXXXXXXXXXXXXXXXFLPFIDPNN---------------------------VAQGQLQMMSETE-------ETTGTLKVHGGFKLAFDSIKDRVTELL-----LDEAGAGGATDH-VVFVGHSMGGALAQLATVYYCELKARLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKLDVSKSAKELFEMENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWELQSGGTALK 709 LL + A+ K G + VH VVSDKACAV+ V P T V+FRGTKDPVDVLTDI F+SA F P P + + G+ E E + T++VH GF +AF+SI+D V+ +L D AG H VVFVGHS+GGALA LA VY+ +L+ RLVTFA+PA GN AFCR L+ +PYGGLRVWN+ DVVP IAQLVGY HAG+PIK + +SA FE ENV + G +APHV+FQ+G +VFP+I +++S A K Sbjct: 964 LLMKKAIEVEKGKG----DVAVHTVVSDKACAVIGVSPSLNLTVVSFRGTKDPVDVLTDIQFISAPFKPRNVPRGHRSRIPVSVPVRMAHHPHHPGAPAKDGSTSMDAAAREPRRASLLASLGLRFRGIRHGRAHFAKEREAEPTASAADSNTMEVHRGFAMAFESIRDEVSSILNRYSYTDPAGGHRRFPHEVVFVGHSLGGALAHLAAVYFHDLRPRLVTFAAPATGNLAFCRCLEQVARPYGGLRVWNEGDVVPYIAQLVGYSHAGIPIKCRLPRSAIMKFEQENVGPVFG-FRVVAPHVLFQVGPAVYVFPIITQDVRSASEAAK 1287
BLAST of NO05G04160 vs. NCBI_GenBank
Match: XP_002504916.1 (predicted protein [Micromonas commoda] >ACO66174.1 predicted protein [Micromonas commoda]) HSP 1 Score: 77.4 bits (189), Expect = 2.100e-10 Identity = 72/246 (29.27%), Postives = 103/246 (41.87%), Query Frame = 0 Query: 441 VHHVVSDKACAVVVVVPDRRTTYVTFRGTK--DPVDVLTDINFLSATFTPLGWEEEXXXXXXXXXXXXXXXXXFLPFIDPNNVAQGQLQMMSETEETTGTLKVHGGFKLAFDSIKDRVTELLLDEAGAG-------------------GATD---HVVFVGHSMGGALAQ-LATVYYCELKA-------RLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKLD 655 V V +D AV V D RT V+FRGT+ P+DVLTD+N A F+P ++++ E E +VHGGF A+DS+K R+ + D GAG G D HV GHS+GGAL LA +K+ + F SP +GN AF + + +RV N D+VP++ L+GY+H +++D Sbjct: 358 VESVRTDTQAAVWRCVAD-RTVVVSFRGTEMSKPLDVLTDVNLAPAAFSP-----------------------------------ERVEVEGEDEP-----RVHGGFLAAYDSVKRRILGAVDDVVGAGSGSGKVDSADEGERALRSNGGNDDRWHVFVTGHSLGGALCTLLAADLGASVKSGSRNFTVTAINFGSPRVGNRAFVAMYN--DLVPDSVRVVNGDDLVPTLPALLGYRHVDHGVRID 560
BLAST of NO05G04160 vs. NCBI_GenBank
Match: XP_002953856.1 (hypothetical protein VOLCADRAFT_94625 [Volvox carteri f. nagariensis] >EFJ45180.1 hypothetical protein VOLCADRAFT_94625, partial [Volvox carteri f. nagariensis]) HSP 1 Score: 75.5 bits (184), Expect = 7.900e-10 Identity = 66/224 (29.46%), Postives = 94/224 (41.96%), Query Frame = 0 Query: 458 DRRTTYVTFRGTKDP--VDVLTDINFLSATFTPLGWEEEXXXXXXXXXXXXXXXXXFLPFIDP--NNVAQGQLQMMSETEETTGTLK--VHGGFKLAFDSIKDRVTELLLDEAGAGGATDH--VVFVGHSMGGALAQLATVYYCELK-------------------ARLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKLD 655 + R V FRGT+ D+ TD+N + P ++ LPF V+ Q +S G ++ VH GF A+DS++ V LL + GAG D+ V+ GHS+GGALA LA E + L TF +P +GN AF D RV N D++PS+ +L+GY H G ++LD Sbjct: 366 EAREAVVAFRGTEQVKWKDIATDLNLTPCSLNPERLDDNEG----------------LPFTARIIKAVSGVYQQQVSGRGGGVGVVRFMVHKGFLSAYDSVRRTVFTLLDEITGAGDKGDNWRVLVTGHSLGGALATLAAYELAERRPLPPPRPPITLTPARSVQNITLYTFGAPRVGNKAFAEEFDRLVP--DAWRVTNSNDIIPSVPRLMGYCHVGHAVRLD 571
BLAST of NO05G04160 vs. NCBI_GenBank
Match: KXZ45673.1 (hypothetical protein GPECTOR_52g70 [Gonium pectorale]) HSP 1 Score: 75.1 bits (183), Expect = 1.000e-9 Identity = 43/123 (34.96%), Postives = 61/123 (49.59%), Query Frame = 0 Query: 541 VHGGFKLAFDSIKDRVTELLLDEAGAGGATDHVVFVGHSMGGALAQLATVYYCELK------ARLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKLDVSK 658 VHGGF ++DS++D V LL + V+ GHS+GGALA L ELK + T+ +P +GN AF + R ND D+VP + +L+G+ H G P+ L K Sbjct: 466 VHGGFHFSYDSVRDTVFGLLDEIRATRPGPWRVLVTGHSLGGALATLGAYELAELKLPADPPVVMYTYGAPRVGNKAFAEAFNALVP--DAFRCANDDDIVPRVPRLMGFCHVGTPVLLAEGK 586
BLAST of NO05G04160 vs. NCBI_GenBank
Match: KXZ45674.1 (hypothetical protein GPECTOR_52g71 [Gonium pectorale]) HSP 1 Score: 73.9 bits (180), Expect = 2.300e-9 Identity = 46/130 (35.38%), Postives = 64/130 (49.23%), Query Frame = 0 Query: 534 ETTGTLKVHGGFKLAFDSIKDRVTELLLDEAGAGGATDHVVFVGHSMGGALAQLATVYYCELK------ARLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKLDVSK 658 E +G L VHGGF ++DS++D V LL + V GHS+GGALA LA E + + T+ +P +GN AF + R ND DVVP + +L+G+ H G P+ L K Sbjct: 487 ERSGQL-VHGGFHFSYDSVRDTVFGLLDEMRATRPGPWRVYVTGHSLGGALATLAAYELAERRLPADPPVVMYTYGAPRVGNKAFAEAFNALVP--DAFRCTNDKDVVPRVPRLMGFCHVGTPVLLAEGK 613
BLAST of NO05G04160 vs. NCBI_GenBank
Match: KXZ45677.1 (hypothetical protein GPECTOR_52g74 [Gonium pectorale]) HSP 1 Score: 73.2 bits (178), Expect = 3.900e-9 Identity = 61/208 (29.33%), Postives = 87/208 (41.83%), Query Frame = 0 Query: 458 DRRTTYVTFRGTKDP--VDVLTDINFLSATFTPLGWEEEXXXXXXXXXXXXXXXXXFLPFIDPNNVAQGQLQMMSETEETTGTLKVHGGFKLAFDSIKDRVTELLLDEAGAG--GATDHVVFVGHSMGGALAQLATVYYCELKA--------RLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKL 654 + R + FRGT+ D+ TD+N A+ P ++ LPF + + L VH GF A+DS+K V LL G+G G V+ GHS+GGALA LA E + L T+ +P +GN AF D RV N D++PS+ +L+GY H G ++L Sbjct: 321 EAREAVIAFRGTEQVKWKDIATDLNLTPASLNPERLDDNAG----------------LPFT--------ARIFKAVSGANQNQLMVHKGFLDAYDSVKRAVFTLLDAVTGSGERGGPWRVLVTGHSLGGALATLAAYELAERRCPARTVQQISLYTYGAPRVGNKAFAEAFDRVVP--DTWRVTNANDIIPSVPRLMGYCHVGHAVRL 502
BLAST of NO05G04160 vs. NCBI_GenBank
Match: KXZ45675.1 (hypothetical protein GPECTOR_52g72 [Gonium pectorale]) HSP 1 Score: 72.8 bits (177), Expect = 5.200e-9 Identity = 43/120 (35.83%), Postives = 61/120 (50.83%), Query Frame = 0 Query: 539 LKVHGGFKLAFDSIKDRVTELLLDEAGAGGATD-HVVFVGHSMGGALAQLATVYYCE----LKARLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKL 654 + VH GF+LA DS+ D +L GAG A + HV GHS+GGALA L + K + ++ P +GN AF + R N+ D VP + +L+GY H G P++L Sbjct: 559 MNVHKGFRLAHDSVWDNTLAVLKTVTGAGPAANWHVYVTGHSLGGALATLGAYKLAKSGVVKKVSMYSYGQPRVGNKAFADEFNALIS--NAWRFANENDAVPRVPRLMGYCHVGKPVQL 676
BLAST of NO05G04160 vs. NCBI_GenBank
Match: OWM74739.1 (hypothetical protein CDL15_Pgr009286 [Punica granatum]) HSP 1 Score: 71.6 bits (174), Expect = 1.100e-8 Identity = 44/142 (30.99%), Postives = 67/142 (47.18%), Query Frame = 0 Query: 539 LKVHGGFKLAFDSIKDRVTELL------LDEAGAGGATDHVVFVGHSMGGALAQLATVYYCE--------LKARLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKLDVSKSAKELFEME 667 ++VH GF A+DS++ R+ LL D+AG + HV GHS+GGALA L + + + F SP +GN F L + + RV N D++P++ +L+GY H P+ L L +E Sbjct: 555 VQVHSGFLSAYDSVRIRIISLLKLAIGFRDDAGESQSKWHVYVTGHSLGGALATLLALELSSSQLAKRGVISVTMYNFGSPRVGNKRFAELYN--EKVKDSWRVVNHRDIIPTVPRLMGYCHVAQPVYLAAGDLNDALINIE 694
BLAST of NO05G04160 vs. NCBI_GenBank
Match: XP_001745027.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ90260.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 71.2 bits (173), Expect = 1.500e-8 Identity = 46/117 (39.32%), Postives = 61/117 (52.14%), Query Frame = 0 Query: 540 KVHGGFKLAFDSIKDRVTELLLDEAGAGGATDHVVFVGHSMGGALAQLATVYYC---ELKARLVTFASPAIGNGAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYKHAGVPIKL 654 +VH GF +F S KDR++ L G VVF GHS GGALA LA Y+ + K ++TF +P +G+ F L+ Q LR+ N D VP + L Y HAG P+ L Sbjct: 95 RVHSGFWQSFQSAKDRLSRDLQPYFG-----HPVVFCGHSKGGALANLAAAYFAHEFQQKKWILTFGAPKVGDKRFATYLN--SQMCLHLRLENQTDPVPFLPPLSKYAHAGNPVDL 204 The following BLAST results are available for this feature:
BLAST of NO05G04160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04160 ID=NO05G04160|Name=NO05G04160|organism=Nannochloropsis oceanica|type=gene|length=2256bpback to top protein sequence of NO05G04160.1 >NO05G04160.1-protein ID=NO05G04160.1-protein|Name=NO05G04160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=752bpback to top Synonyms
Publications
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